wrong results

Bug #1438266 reported by MatatTHC on 2015-03-30
6
This bug affects 1 person
Affects Status Importance Assigned to Milestone
ncbi-tools6 (Ubuntu)
Undecided
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Bug Description

I observed that the blastall version included in the ubuntu package produces results that are different from the results generated with blastall from the binary distribution downloaded from NCBI. Of course the same version is used (2.2.26).

The differences affect the computed e-values and the order in which the results are computed.

Here is a program call to reproduce it:

blastall -p blastx -Q 2 -d nad3.fas -i NC_023220.fas -F "m S" -m 8 -f 12 -b 1073741823 -e 1e-1 -o NC_023220.nad3.blast

The data is attached.

I find it also strange that the binary is so small.

ProblemType: Bug
DistroRelease: Ubuntu 14.04
Package: blast2 1:2.2.26.20120620-7
ProcVersionSignature: Ubuntu 3.13.0-48.80-generic 3.13.11-ckt16
Uname: Linux 3.13.0-48-generic x86_64
ApportVersion: 2.14.1-0ubuntu3.7
Architecture: amd64
CurrentDesktop: GNOME
Date: Mon Mar 30 18:17:52 2015
InstallationDate: Installed on 2014-12-22 (98 days ago)
InstallationMedia: Ubuntu 14.04.1 LTS "Trusty Tahr" - Release amd64 (20140722.2)
SourcePackage: ncbi-tools6
UpgradeStatus: No upgrade log present (probably fresh install)

MatatTHC (matatthc) wrote :
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