Ubuntu
ncbi-blast+ package

ncbi-blast+ 2.16.0+ds-6 source package in Ubuntu

Changelog

ncbi-blast+ (2.16.0+ds-6) unstable; urgency=medium

  * debian/control: Reinstate big-endian builds, which can be salvaged
    adequately well.
  * debian/patches/big_endian_workaround (new): On big-endian
    architectures, roll makeblastdb's and makeprofiledb's default
    blastdb_version back to 4 pending a proper fix.  Some things,
    including in particular q2-feature-classifier, will still explicitly
    request version 5, but everything else should be OK.  (See #1077777.)
  * debian/rules: Try disabling optimization altogether on sh4.

 -- Aaron M. Ucko <email address hidden>  Tue, 06 Aug 2024 21:45:09 -0400

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe science

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File Size SHA-256 Checksum
ncbi-blast+_2.16.0+ds-6.dsc 2.4 KiB 793681b195a0ff028e202fee865a4c0d68752c142e7408f7b93f83da8af111b7
ncbi-blast+_2.16.0+ds.orig.tar.xz 17.6 MiB b98c86118edd2c4a048303caaed70b6debb11dd4372e83795b397cd193fcaf42
ncbi-blast+_2.16.0+ds-6.debian.tar.xz 39.8 KiB 8d08764e2f4412ccd37ec733660b8717a809cc6c247d099b83cfb8f1b0d3838a

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Binary packages built by this source

ncbi-blast+: next generation suite of BLAST sequence search tools

 The Basic Local Alignment Search Tool (BLAST) is the most widely
 used sequence similarity tool. There are versions of BLAST that
 compare protein queries to protein databases, nucleotide queries
 to nucleotide databases, as well as versions that translate nucleotide
 queries or databases in all six frames and compare to protein databases
 or queries.
 PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting
 with a protein query, and then uses that PSSM to perform further searches.
 It is also possible to compare a protein or nucleotide query to a
 database of PSSM’s.
 The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as
 a network service.

ncbi-blast+-dbgsym: debug symbols for ncbi-blast+
ncbi-blast+-legacy: NCBI Blast legacy call script

 This package adds some fake scripts to call NCBI+ programs
 with the NCBI blast command line. It makes use of the
 legacy_blast script in ncbi-blast+ package.