msxpertsuite 4.0.0-1 source package in Ubuntu
Changelog
msxpertsuite (4.0.0-1) unstable; urgency=low * New upstream release. -- Filippo Rusconi <email address hidden> Thu, 14 Dec 2017 20:19:26 +0100
Upload details
- Uploaded by:
- Debichem Team
- Uploaded to:
- Sid
- Original maintainer:
- Debichem Team
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Low Urgency
See full publishing history Publishing
Series | Published | Component | Section |
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Downloads
File | Size | SHA-256 Checksum |
---|---|---|
msxpertsuite_4.0.0-1.dsc | 2.7 KiB | 3707252f6ff942ec60ec9e8b8831656f0d356622c15706bea8eafec03cabc8de |
msxpertsuite_4.0.0.orig.tar.gz | 29.6 MiB | eed048ae1f9e898891fe69d122bf8169607064167bc48da9455fd03858fcb8a4 |
msxpertsuite_4.0.0-1.debian.tar.xz | 15.5 KiB | dbe604c69778dfe8091ab5d076727f62dd9fcca224cdf54467bfa04b3574ab3e |
Available diffs
- diff from 3.8.1-2 to 4.0.0-1 (31.1 KiB)
No changes file available.
Binary packages built by this source
- massxpert: transitional package
This is a transitional package. It can safely be removed.
- massxpert-data: transitional package
This is a transitional package. It can safely be removed.
- massxpert-doc: transitional package
This is a transitional package. It can safely be removed.
- msxpertsuite: mass spectrometry software suite - executable files
msXpertSuite is a collection of programs to simulate and analyse mass
spectrometric data obtained on linear (bio-)polymers. It is the
successor of GNU polyXmass, first, and of massXpert, second.
.
Three programs, massXpert, mineXpert and convXpert allow the following:
.
massXpert:
- making brand new polymer chemistry definitions;
- using the definitions to perform easy calculations in a desktop
calculator-like manner;
- performing sophisticated polymer sequence editing and simulations;
- perform m/z list comparisons;
.
Chemical simulations encompass cleavage (either chemical or
enzymatic), gas-phase fragmentations, chemical modification of any
monomer in the polymer sequence, cross-linking of monomers in the
sequence, arbitrary mass searches, calculation of the isotopic
pattern...
.
mineXpert:
- Open mass spectrometry data files (mzML, mzXML, asc, xy, ...);
- Calculate and display the TIC chromatogram;
- For mobility data, calculate and display a mz=f(dt) color map;
- Integrate the data from the TIC chromatogram or color map
- to mass spectrum;
- to drift spectrum;
- back to TIC chromatogram (XIC chromatogram);
- reverse operations;
- Export the data to text files;
- Slice a big initial file into smaller chunks for easier mining;
- Define how mining activity is recorded on disk for later use;
- Convert mzML files into a private (albeit open) mass spectrometry
format that allows better performance (based on SQLite3).
.
This package contains the binary programs.
- msxpertsuite-data: mass spectrometry software suite - arch-indep data
msXpertSuite is a collection of programs to simulate and analyse mass
spectrometric data obtained on linear (bio-)polymers. It is the
successor of GNU polyXmass, first, and of massXpert, second.
.
This package contains the architecture-independent data required for
the proper functioning of msxpertsuite. For example, polymer chemistry
definition files are in this package, for use with the massxpert program.
- msxpertsuite-dbgsym: debug symbols for msxpertsuite
- msxpertsuite-dev-doc: mass spectrometry software suite - developer doc
msXpertSuite is a collection of programs to simulate and analyse mass
spectrometric data obtained on linear (bio-)polymers. It is the
successor of GNU polyXmass, first, and of massXpert, second.
.
This package contains the developer doxygen-based doc.
- msxpertsuite-doc: mass spectrometry software suite - manuals
msXpertSuite is a collection of programs to simulate and analyse mass
spectrometric data obtained on linear (bio-)polymers. It is the
successor of GNU polyXmass, first, and of massXpert, second.
.
This package contains the manuals in PDF format.