msxpertsuite 3.7.0-1 source package in Ubuntu
Changelog
msxpertsuite (3.7.0-1) unstable; urgency=low * New upstream package: - small bug fixes; - unit testing code using the catch testing software; - regression testing using the scripting framework already coded into mineXpert. -- Filippo Rusconi <email address hidden> Fri, 13 Oct 2017 11:16:18 +0200
Upload details
- Uploaded by:
- Debichem Team
- Uploaded to:
- Sid
- Original maintainer:
- Debichem Team
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Low Urgency
See full publishing history Publishing
Series | Published | Component | Section |
---|
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
msxpertsuite_3.7.0-1.dsc | 2.7 KiB | d58457521e348c9224c9b4facfce6fe720fc1feb49c1e15b5b5809854983966c |
msxpertsuite_3.7.0.orig.tar.gz | 29.0 MiB | 9cbfc21f46e00415096f879732898338ad997fdd5dd6f8009fdc9159033031fe |
msxpertsuite_3.7.0-1.debian.tar.xz | 15.2 KiB | 8f30ac1a2a9568d14e705dd9f7dde7848e8be1d3d4d999cf6a1b56b36a162001 |
No changes file available.
Binary packages built by this source
- msxpertsuite: mass spectrometry software suite - executable files
msXpertSuite is a collection of programs to simulate and analyse mass
spectrometric data obtained on linear (bio-)polymers. It is the
successor of GNU polyXmass, first, and of massXpert, second.
.
Three programs, massXpert, mineXpert and convXpert allow the following:
.
massXpert:
- making brand new polymer chemistry definitions;
- using the definitions to perform easy calculations in a desktop
calculator-like manner;
- performing sophisticated polymer sequence editing and simulations;
- perform m/z list comparisons;
.
Chemical simulations encompass cleavage (either chemical or
enzymatic), gas-phase fragmentations, chemical modification of any
monomer in the polymer sequence, cross-linking of monomers in the
sequence, arbitrary mass searches, calculation of the isotopic
pattern...
.
mineXpert:
- Open mass spectrometry data files (mzML, mzXML, asc, xy, ...);
- Calculate and display the TIC chromatogram;
- For mobility data, calculate and display a mz=f(dt) color map;
- Integrate the data from the TIC chromatogram or color map
- to mass spectrum;
- to drift spectrum;
- back to TIC chromatogram (XIC chromatogram);
- reverse operations;
- Export the data to text files;
- Slice a big initial file into smaller chunks for easier mining;
- Define how mining activity is recorded on disk for later use;
- Convert mzML files into a private (albeit open) mass spectrometry
format that allows better performance (based on SQLite3).
.
This package contains the binary programs.
- msxpertsuite-dbgsym: debug symbols for msxpertsuite