https://launchpad.net/ubuntu/+source/mirtop/0.4.25-1/+build/23796159 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lcy02-amd64-042 5.4.0-113-generic #127-Ubuntu SMP Wed May 18 14:30:56 UTC 2022 x86_64 Buildd toolchain package versions: launchpad-buildd_212~550~ubuntu20.04.1 python3-lpbuildd_212~550~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.4 dpkg-dev_1.19.7ubuntu3 python3-debian_0.1.36ubuntu1. Syncing the system clock with the buildd NTP service... 29 May 17:20:33 ntpdate[1824]: adjust time server 10.131.248.1 offset -0.000120 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=kinetic --arch=amd64 PACKAGEBUILD-23796159 --image-type chroot /home/buildd/filecache-default/4d18961cd05542d5def75b14497015b674c37821 Creating target for build PACKAGEBUILD-23796159 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=kinetic --arch=amd64 PACKAGEBUILD-23796159 Starting target for build PACKAGEBUILD-23796159 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=kinetic --arch=amd64 PACKAGEBUILD-23796159 'deb http://ftpmaster.internal/ubuntu kinetic main universe' 'deb http://ftpmaster.internal/ubuntu kinetic-security main universe' 'deb http://ftpmaster.internal/ubuntu kinetic-updates main universe' 'deb http://ftpmaster.internal/ubuntu kinetic-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-23796159 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=kinetic --arch=amd64 PACKAGEBUILD-23796159 Updating target for build PACKAGEBUILD-23796159 Get:1 http://ftpmaster.internal/ubuntu kinetic InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu kinetic-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu kinetic-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu kinetic-proposed InRelease [118 kB] Get:5 http://ftpmaster.internal/ubuntu kinetic/main amd64 Packages [1395 kB] Get:6 http://ftpmaster.internal/ubuntu kinetic/main Translation-en [510 kB] Get:7 http://ftpmaster.internal/ubuntu kinetic/universe amd64 Packages [14.2 MB] Get:8 http://ftpmaster.internal/ubuntu kinetic/universe Translation-en [5709 kB] Get:9 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 Packages [68.9 kB] Get:10 http://ftpmaster.internal/ubuntu kinetic-proposed/main Translation-en [27.1 kB] Get:11 http://ftpmaster.internal/ubuntu kinetic-proposed/universe amd64 Packages [284 kB] Get:12 http://ftpmaster.internal/ubuntu kinetic-proposed/universe Translation-en [107 kB] Fetched 22.9 MB in 2s (11.5 MB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: util-linux-extra The following packages will be upgraded: adduser apt binutils binutils-common binutils-x86-64-linux-gnu bsdutils cpp-11 dash dpkg dpkg-dev fakeroot g++-11 gcc-11 gcc-11-base gcc-12-base init init-system-helpers libapt-pkg6.0 libasan6 libatomic1 libbinutils libblkid1 libcc1-0 libctf-nobfd0 libctf0 libdb5.3 libdpkg-perl libfakeroot libgcc-11-dev libgcc-s1 libgcrypt20 libgomp1 libgpg-error0 libip4tc2 libitm1 liblsan0 liblzma5 libmount1 libncurses6 libncursesw6 libpng16-16 libquadmath0 libreadline8 libsmartcols1 libsqlite3-0 libssl3 libstdc++-11-dev libstdc++6 libtinfo6 libtsan0 libubsan1 libuuid1 libzstd1 linux-libc-dev login mount ncurses-base ncurses-bin openssl passwd pinentry-curses readline-common util-linux xz-utils 64 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 72.5 MB of archives. After this operation, 795 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu kinetic/main amd64 bsdutils amd64 1:2.38-4ubuntu1 [80.7 kB] Get:2 http://ftpmaster.internal/ubuntu kinetic/main amd64 libzstd1 amd64 1.5.2+dfsg-1 [270 kB] Get:3 http://ftpmaster.internal/ubuntu kinetic/main amd64 libatomic1 amd64 12.1.0-2ubuntu1 [10.4 kB] Get:4 http://ftpmaster.internal/ubuntu kinetic/main amd64 libubsan1 amd64 12.1.0-2ubuntu1 [969 kB] Get:5 http://ftpmaster.internal/ubuntu kinetic/main amd64 libquadmath0 amd64 12.1.0-2ubuntu1 [152 kB] Get:6 http://ftpmaster.internal/ubuntu kinetic/main amd64 liblsan0 amd64 12.1.0-2ubuntu1 [1060 kB] Get:7 http://ftpmaster.internal/ubuntu kinetic/main amd64 libitm1 amd64 12.1.0-2ubuntu1 [29.5 kB] Get:8 http://ftpmaster.internal/ubuntu kinetic/main amd64 libgomp1 amd64 12.1.0-2ubuntu1 [125 kB] Get:9 http://ftpmaster.internal/ubuntu kinetic/main amd64 gcc-12-base amd64 12.1.0-2ubuntu1 [18.8 kB] Get:10 http://ftpmaster.internal/ubuntu kinetic/main amd64 libgcc-s1 amd64 12.1.0-2ubuntu1 [54.2 kB] Get:11 http://ftpmaster.internal/ubuntu kinetic/main amd64 libcc1-0 amd64 12.1.0-2ubuntu1 [46.6 kB] Get:12 http://ftpmaster.internal/ubuntu kinetic/main amd64 libstdc++6 amd64 12.1.0-2ubuntu1 [679 kB] Get:13 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 libgpg-error0 amd64 1.45-2 [69.0 kB] Get:14 http://ftpmaster.internal/ubuntu kinetic/main amd64 libgcrypt20 amd64 1.10.1-2ubuntu1 [524 kB] Get:15 http://ftpmaster.internal/ubuntu kinetic/main amd64 liblzma5 amd64 5.2.5-2.1 [99.2 kB] Get:16 http://ftpmaster.internal/ubuntu kinetic/main amd64 libapt-pkg6.0 amd64 2.5.0 [896 kB] Get:17 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 dpkg amd64 1.21.8ubuntu1 [1333 kB] Get:18 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 dash amd64 0.5.11+git20210903+057cd650a4ed-8 [88.0 kB] Get:19 http://ftpmaster.internal/ubuntu kinetic/main amd64 login amd64 1:4.11.1+dfsg1-2ubuntu1 [183 kB] Get:20 http://ftpmaster.internal/ubuntu kinetic/main amd64 ncurses-bin amd64 6.3+20220423-2 [183 kB] Get:21 http://ftpmaster.internal/ubuntu kinetic/main amd64 libblkid1 amd64 2.38-4ubuntu1 [103 kB] Get:22 http://ftpmaster.internal/ubuntu kinetic/main amd64 libmount1 amd64 2.38-4ubuntu1 [121 kB] Get:23 http://ftpmaster.internal/ubuntu kinetic/main amd64 libsmartcols1 amd64 2.38-4ubuntu1 [50.8 kB] Get:24 http://ftpmaster.internal/ubuntu kinetic/main amd64 util-linux-extra amd64 2.38-4ubuntu1 [83.8 kB] Get:25 http://ftpmaster.internal/ubuntu kinetic/main amd64 util-linux amd64 2.38-4ubuntu1 [1069 kB] Get:26 http://ftpmaster.internal/ubuntu kinetic/main amd64 init-system-helpers all 1.63 [38.7 kB] Get:27 http://ftpmaster.internal/ubuntu kinetic/main amd64 ncurses-base all 6.3+20220423-2 [21.2 kB] Get:28 http://ftpmaster.internal/ubuntu kinetic/main amd64 passwd amd64 1:4.11.1+dfsg1-2ubuntu1 [765 kB] Get:29 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 adduser all 3.121ubuntu1 [150 kB] Get:30 http://ftpmaster.internal/ubuntu kinetic/main amd64 apt amd64 2.5.0 [1370 kB] Get:31 http://ftpmaster.internal/ubuntu kinetic/main amd64 mount amd64 2.38-4ubuntu1 [114 kB] Get:32 http://ftpmaster.internal/ubuntu kinetic/main amd64 init amd64 1.63 [5674 B] Get:33 http://ftpmaster.internal/ubuntu kinetic/main amd64 libdb5.3 amd64 5.3.28+dfsg1-0.9 [717 kB] Get:34 http://ftpmaster.internal/ubuntu kinetic/main amd64 libncurses6 amd64 6.3+20220423-2 [110 kB] Get:35 http://ftpmaster.internal/ubuntu kinetic/main amd64 libncursesw6 amd64 6.3+20220423-2 [146 kB] Get:36 http://ftpmaster.internal/ubuntu kinetic/main amd64 libtinfo6 amd64 6.3+20220423-2 [99.6 kB] Get:37 http://ftpmaster.internal/ubuntu kinetic/main amd64 libuuid1 amd64 2.38-4ubuntu1 [23.2 kB] Get:38 http://ftpmaster.internal/ubuntu kinetic/main amd64 libip4tc2 amd64 1.8.7-1ubuntu6 [19.7 kB] Get:39 http://ftpmaster.internal/ubuntu kinetic/main amd64 readline-common all 8.1.2-1.2 [53.6 kB] Get:40 http://ftpmaster.internal/ubuntu kinetic/main amd64 libreadline8 amd64 8.1.2-1.2 [153 kB] Get:41 http://ftpmaster.internal/ubuntu kinetic/main amd64 libsqlite3-0 amd64 3.38.5-1 [646 kB] Get:42 http://ftpmaster.internal/ubuntu kinetic/main amd64 libssl3 amd64 3.0.3-0ubuntu1 [1884 kB] Get:43 http://ftpmaster.internal/ubuntu kinetic/main amd64 openssl amd64 3.0.3-0ubuntu1 [1173 kB] Get:44 http://ftpmaster.internal/ubuntu kinetic/main amd64 libpng16-16 amd64 1.6.37-5 [187 kB] Get:45 http://ftpmaster.internal/ubuntu kinetic/main amd64 xz-utils amd64 5.2.5-2.1 [83.8 kB] Get:46 http://ftpmaster.internal/ubuntu kinetic/main amd64 libctf0 amd64 2.38-4ubuntu1 [101 kB] Get:47 http://ftpmaster.internal/ubuntu kinetic/main amd64 libctf-nobfd0 amd64 2.38-4ubuntu1 [105 kB] Get:48 http://ftpmaster.internal/ubuntu kinetic/main amd64 binutils-x86-64-linux-gnu amd64 2.38-4ubuntu1 [2304 kB] Get:49 http://ftpmaster.internal/ubuntu kinetic/main amd64 libbinutils amd64 2.38-4ubuntu1 [651 kB] Get:50 http://ftpmaster.internal/ubuntu kinetic/main amd64 binutils amd64 2.38-4ubuntu1 [3190 B] Get:51 http://ftpmaster.internal/ubuntu kinetic/main amd64 binutils-common amd64 2.38-4ubuntu1 [221 kB] Get:52 http://ftpmaster.internal/ubuntu kinetic/main amd64 g++-11 amd64 11.3.0-3ubuntu1 [11.3 MB] Get:53 http://ftpmaster.internal/ubuntu kinetic/main amd64 libstdc++-11-dev amd64 11.3.0-3ubuntu1 [2074 kB] Get:54 http://ftpmaster.internal/ubuntu kinetic/main amd64 libasan6 amd64 11.3.0-3ubuntu1 [2265 kB] Get:55 http://ftpmaster.internal/ubuntu kinetic/main amd64 gcc-11 amd64 11.3.0-3ubuntu1 [20.0 MB] Get:56 http://ftpmaster.internal/ubuntu kinetic/main amd64 libgcc-11-dev amd64 11.3.0-3ubuntu1 [2484 kB] Get:57 http://ftpmaster.internal/ubuntu kinetic/main amd64 libtsan0 amd64 11.3.0-3ubuntu1 [2241 kB] Get:58 http://ftpmaster.internal/ubuntu kinetic/main amd64 cpp-11 amd64 11.3.0-3ubuntu1 [9910 kB] Get:59 http://ftpmaster.internal/ubuntu kinetic/main amd64 gcc-11-base amd64 11.3.0-3ubuntu1 [20.8 kB] Get:60 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 dpkg-dev all 1.21.8ubuntu1 [1069 kB] Get:61 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 libdpkg-perl all 1.21.8ubuntu1 [237 kB] Get:62 http://ftpmaster.internal/ubuntu kinetic/main amd64 libfakeroot amd64 1.29-1ubuntu1 [31.1 kB] Get:63 http://ftpmaster.internal/ubuntu kinetic/main amd64 fakeroot amd64 1.29-1ubuntu1 [60.0 kB] Get:64 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 linux-libc-dev amd64 5.15.0-28.29 [1345 kB] Get:65 http://ftpmaster.internal/ubuntu kinetic/main amd64 pinentry-curses amd64 1.2.0-1ubuntu1 [34.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 72.5 MB in 0s (160 MB/s) (Reading database ... 13449 files and directories currently installed.) 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Processing triggers for libc-bin (2.35-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-23796159 amd64 kinetic-proposed -c chroot:build-PACKAGEBUILD-23796159 --arch=amd64 --dist=kinetic-proposed --nolog -A mirtop_0.4.25-1.dsc Initiating build PACKAGEBUILD-23796159 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-113-generic #127-Ubuntu SMP Wed May 18 14:30:56 UTC 2022 x86_64 sbuild (Debian sbuild) 0.79.0 (05 February 2020) on lcy02-amd64-042.buildd +==============================================================================+ | mirtop 0.4.25-1 (amd64) Sun, 29 May 2022 17:20:46 +0000 | +==============================================================================+ Package: mirtop Version: 0.4.25-1 Source Version: 0.4.25-1 Distribution: kinetic-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-23796159/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/mirtop-07kjRy/resolver-RAipPO' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- mirtop_0.4.25-1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/mirtop-07kjRy/mirtop-0.4.25' with '<>' I: NOTICE: Log filtering will replace 'build/mirtop-07kjRy' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-sphinx, python3-recommonmark, python3-pysam, python3-pybedtools, python3-pandas, python3-biopython, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-sphinx, python3-recommonmark, python3-pysam, python3-pybedtools, python3-pandas, python3-biopython, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [427 B] Get:5 copy:/<>/apt_archive ./ Packages [507 B] Fetched 1891 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-urw-base35 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbrotli1 libbsd0 libcurl3-gnutls libdebhelper-perl libdeflate0 libdw1 libelf1 libexpat1 libfile-stripnondeterminism-perl libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhts3 libhtscodecs2 libicu71 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblcms2-2 libldap-2.5-0 libmagic-mgc libmagic1 libmd0 libmpdec3 libnghttp2-14 libopenjp2-7 libpipeline1 libpsl5 libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libraqm0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtiff5 libtool libuchardet0 libunicode-escape-perl libunicode-string-perl libwebp7 libwebpdemux2 libwebpmux3 libxau6 libxcb1 libxdmcp6 libxml2 m4 mailcap man-db media-types mime-support po-debconf python-babel-localedata python3 python3-alabaster python3-all python3-babel python3-biopython python3-certifi python3-chardet python3-charset-normalizer python3-commonmark python3-dateutil python3-distutils python3-docutils python3-idna python3-imagesize python3-importlib-metadata python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-more-itertools python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pkg-resources python3-pybedtools python3-pygments python3-pyparsing python3-pysam python3-recommonmark python3-renderpm python3-reportlab python3-reportlab-accel python3-requests python3-roman python3-setuptools python3-six python3-snowballstemmer python3-sphinx python3-tz python3-urllib3 python3-zipp python3.10 python3.10-minimal sgml-base sphinx-common w3c-sgml-lib xml-core Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make flit python3-build python3-tomli python3-installer fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre gettext-doc libasprintf-dev libgettextpo-dev groff liblcms2-utils libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv bwa clustalo clustalw dialign dssp emboss fasttree mafft muscle phylip phyml prank probcons python3-mysqldb python3-matplotlib python3-mmtf python3-rdflib python3-psycopg2 python3-scipy raxml samtools t-coffee wise docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-jinja2-doc gfortran python-numpy-doc python3-dev python3-pytest python-pandas-doc python3-statsmodels python-pil-doc python-pybedtools-doc python-pygments-doc ttf-bitstream-vera python-pyparsing-doc pdf-viewer python3-egenix-mxtexttools python-reportlab-doc python3-cryptography python3-openssl python3-socks python-requests-doc python-setuptools-doc python3-stemmer dvipng fonts-freefont-otf imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme sphinx-doc tex-gyre texlive-fonts-recommended texlive-latex-extra texlive-plain-generic python3-brotli python3.10-venv python3.10-doc binfmt-support sgml-base-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libldap-common publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl python-biopython-doc ncbi-blast+ libpaper-utils python3-scipy python3-matplotlib python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-xlwt python3-bs4 python3-html5lib python3-lxml python3-tables python3-numba python3-olefile The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-urw-base35 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbrotli1 libbsd0 libcurl3-gnutls libdebhelper-perl libdeflate0 libdw1 libelf1 libexpat1 libfile-stripnondeterminism-perl libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhts3 libhtscodecs2 libicu71 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblcms2-2 libldap-2.5-0 libmagic-mgc libmagic1 libmd0 libmpdec3 libnghttp2-14 libopenjp2-7 libpipeline1 libpsl5 libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libraqm0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtiff5 libtool libuchardet0 libunicode-escape-perl libunicode-string-perl libwebp7 libwebpdemux2 libwebpmux3 libxau6 libxcb1 libxdmcp6 libxml2 m4 mailcap man-db media-types mime-support po-debconf python-babel-localedata python3 python3-alabaster python3-all python3-babel python3-biopython python3-certifi python3-chardet python3-charset-normalizer python3-commonmark python3-dateutil python3-distutils python3-docutils python3-idna python3-imagesize python3-importlib-metadata python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal python3-more-itertools python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pkg-resources python3-pybedtools python3-pygments python3-pyparsing python3-pysam python3-recommonmark python3-renderpm python3-reportlab python3-reportlab-accel python3-requests python3-roman python3-setuptools python3-six python3-snowballstemmer python3-sphinx python3-tz python3-urllib3 python3-zipp python3.10 python3.10-minimal sbuild-build-depends-main-dummy sgml-base sphinx-common w3c-sgml-lib xml-core 0 upgraded, 135 newly installed, 0 to remove and 0 not upgraded. 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kinetic/main amd64 libjs-jquery all 3.6.0+dfsg+~3.5.13-1 [321 kB] Get:82 http://ftpmaster.internal/ubuntu kinetic/main amd64 libjs-underscore all 1.13.3~dfsg+~1.11.4-1 [118 kB] Get:83 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 libjs-sphinxdoc all 4.5.0-3 [142 kB] Get:84 http://ftpmaster.internal/ubuntu kinetic/main amd64 liblapack3 amd64 3.10.1-2 [2492 kB] Get:85 http://ftpmaster.internal/ubuntu kinetic/main amd64 liblcms2-2 amd64 2.12~rc1-2build2 [159 kB] Get:86 http://ftpmaster.internal/ubuntu kinetic/main amd64 libraqm0 amd64 0.7.0-4ubuntu1 [11.7 kB] Get:87 http://ftpmaster.internal/ubuntu kinetic/main amd64 libjbig0 amd64 2.1-3.1build3 [28.9 kB] Get:88 http://ftpmaster.internal/ubuntu kinetic/main amd64 libwebp7 amd64 1.2.2-2 [206 kB] Get:89 http://ftpmaster.internal/ubuntu kinetic/main amd64 libtiff5 amd64 4.4.0~rc1-1 [183 kB] Get:90 http://ftpmaster.internal/ubuntu kinetic/universe amd64 libunicode-string-perl amd64 2.10-1build5 [115 kB] Get:91 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python3-six all 1.16.0-3ubuntu1 [12.6 kB] Get:111 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-dateutil all 2.8.1-6 [78.4 kB] Get:112 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-roman all 3.3-1 [10.6 kB] Get:113 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-docutils all 0.17.1+dfsg-2 [387 kB] Get:114 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-idna all 3.3-1 [49.3 kB] Get:115 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-imagesize all 1.3.0-1 [6458 B] Get:116 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-more-itertools all 8.10.0-2 [47.9 kB] Get:117 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-zipp all 1.0.0-3 [5440 B] Get:118 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-importlib-metadata all 4.6.4-1 [16.2 kB] Get:119 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-markupsafe amd64 2.0.1-2build1 [12.7 kB] Get:120 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-jinja2 all 3.0.3-1 [108 kB] Get:121 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-pyparsing all 3.0.7-2 [82.6 kB] Get:122 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-packaging all 21.3-1 [30.7 kB] Get:123 http://ftpmaster.internal/ubuntu kinetic/universe amd64 python3-pandas-lib amd64 1.3.5+dfsg-4 [3690 kB] Get:124 http://ftpmaster.internal/ubuntu kinetic/universe amd64 python3-pandas all 1.3.5+dfsg-4 [2678 kB] Get:125 http://ftpmaster.internal/ubuntu kinetic/universe amd64 python3-pysam amd64 0.17.0+ds-2build1 [1749 kB] Get:126 http://ftpmaster.internal/ubuntu kinetic/universe amd64 python3-pybedtools amd64 0.9.0-1build1 [12.3 MB] Get:127 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-pygments all 2.11.2+dfsg-2 [750 kB] Get:128 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 sphinx-common all 4.5.0-3 [689 kB] Get:129 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-alabaster all 0.7.12-1 [17.8 kB] Get:130 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-urllib3 all 1.26.9-1 [98.8 kB] Get:131 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 python3-requests all 2.27.1+dfsg-1ubuntu1 [50.3 kB] Get:132 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-snowballstemmer all 2.2.0-1build1 [60.2 kB] Get:133 http://ftpmaster.internal/ubuntu kinetic-proposed/main amd64 python3-sphinx all 4.5.0-3 [547 kB] Get:134 http://ftpmaster.internal/ubuntu kinetic/universe amd64 python3-recommonmark all 0.7.1+ds-1 [17.2 kB] Get:135 http://ftpmaster.internal/ubuntu kinetic/main amd64 python3-setuptools all 59.6.0-1.2 [339 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 76.0 MB in 1s (129 MB/s) Selecting previously unselected package libpython3.10-minimal:amd64. 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Setting up libpython3-stdlib:amd64 (3.10.4-0ubuntu2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.10 (3.10.4-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libcurl3-gnutls:amd64 (7.83.1-1) ... Setting up python3 (3.10.4-0ubuntu2) ... Setting up man-db (2.10.2-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3-markupsafe (2.0.1-2build1) ... Setting up python3-tz (2022.1-1) ... Setting up python3-six (1.16.0-3ubuntu1) ... Setting up dh-autoreconf (20) ... Setting up python3-pil:amd64 (9.1.1-1) ... Setting up python3-roman (3.3-1) ... Setting up python3-pyparsing (3.0.7-2) ... Setting up python3-certifi (2020.6.20-1) ... Setting up python3-snowballstemmer (2.2.0-1build1) ... Setting up sphinx-common (4.5.0-3) ... Setting up python3-reportlab-accel:amd64 (3.6.9-1) ... Setting up python3-idna (3.3-1) ... Setting up python3-urllib3 (1.26.9-1) ... Setting up python3-reportlab (3.6.9-1) ... Setting up python3-dateutil (2.8.1-6) ... Setting up python3-lib2to3 (3.10.4-0ubuntu1) ... Setting up python3-imagesize (1.3.0-1) ... Setting up python3-commonmark (0.9.1-4) ... Setting up python3-pkg-resources (59.6.0-1.2) ... Setting up python3-distutils (3.10.4-0ubuntu1) ... Setting up dh-python (5.20220403) ... Setting up python3-more-itertools (8.10.0-2) ... Setting up libhts3:amd64 (1.13+ds-2build2) ... Setting up python3-pysam (0.17.0+ds-2build1) ... Setting up python3-renderpm:amd64 (3.6.9-1) ... Setting up python3-setuptools (59.6.0-1.2) ... Setting up python3-babel (2.8.0+dfsg.1-7) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-charset-normalizer (2.0.6-2) ... Setting up python3-alabaster (0.7.12-1) ... Setting up python3-all (3.10.4-0ubuntu2) ... Setting up debhelper (13.7.1ubuntu1) ... Setting up python3-zipp (1.0.0-3) ... Setting up python3-jinja2 (3.0.3-1) ... Setting up python3-pygments (2.11.2+dfsg-2) ... Setting up python3-packaging (21.3-1) ... Setting up python3-chardet (4.0.0-2) ... Setting up python3-requests (2.27.1+dfsg-1ubuntu1) ... Setting up python3-numpy (1:1.21.5-1build2) ... Setting up python3-pybedtools (0.9.0-1build1) ... Setting up python3-importlib-metadata (4.6.4-1) ... Setting up python3-pandas-lib:amd64 (1.3.5+dfsg-4) ... Setting up python3-pandas (1.3.5+dfsg-4) ... Processing triggers for libc-bin (2.35-0ubuntu3) ... Processing triggers for sgml-base (1.30) ... Setting up docutils-common (0.17.1+dfsg-2) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.79+dfsg-3) ... Processing triggers for sgml-base (1.30) ... Setting up python3-docutils (0.17.1+dfsg-2) ... Setting up python3-sphinx (4.5.0-3) ... 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Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-113-generic #127-Ubuntu SMP Wed May 18 14:30:56 UTC 2022 amd64 (x86_64) Toolchain package versions: binutils_2.38-4ubuntu1 dpkg-dev_1.21.8ubuntu1 g++-11_11.3.0-3ubuntu1 gcc-11_11.3.0-3ubuntu1 libc6-dev_2.35-0ubuntu3 libstdc++-11-dev_11.3.0-3ubuntu1 libstdc++6_12.1.0-2ubuntu1 linux-libc-dev_5.15.0-28.29 Package versions: adduser_3.121ubuntu1 advancecomp_2.1-2.1ubuntu2 apt_2.5.0 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-4ubuntu4 autotools-dev_20220109.1 base-files_12ubuntu5 base-passwd_3.5.52build1 bash_5.1-6ubuntu1 binutils_2.38-4ubuntu1 binutils-common_2.38-4ubuntu1 binutils-x86-64-linux-gnu_2.38-4ubuntu1 bsdextrautils_2.38-4ubuntu1 bsdutils_1:2.38-4ubuntu1 build-essential_12.9ubuntu3 bzip2_1.0.8-5build1 ca-certificates_20211016 coreutils_8.32-4.1ubuntu1 cpp_4:11.2.0-1ubuntu1 cpp-11_11.3.0-3ubuntu1 dash_0.5.11+git20210903+057cd650a4ed-8 debconf_1.5.79ubuntu1 debhelper_13.7.1ubuntu1 debianutils_5.7-0.2 debugedit_1:5.0-4build1 dh-autoreconf_20 dh-python_5.20220403 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-0ubuntu2 docutils-common_0.17.1+dfsg-2 dpkg_1.21.8ubuntu1 dpkg-dev_1.21.8ubuntu1 dwz_0.14-1build2 e2fsprogs_1.46.5-2ubuntu1 fakeroot_1.29-1ubuntu1 file_1:5.41-4 findutils_4.8.0-1ubuntu3 fonts-urw-base35_20200910-1 g++_4:11.2.0-1ubuntu1 g++-11_11.3.0-3ubuntu1 gcc_4:11.2.0-1ubuntu1 gcc-11_11.3.0-3ubuntu1 gcc-11-base_11.3.0-3ubuntu1 gcc-12-base_12.1.0-2ubuntu1 gettext_0.21-4ubuntu4 gettext-base_0.21-4ubuntu4 gpg_2.2.27-3ubuntu2 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libjpeg-turbo8_2.1.2-0ubuntu1 libjpeg8_8c-2ubuntu10 libjs-jquery_3.6.0+dfsg+~3.5.13-1 libjs-sphinxdoc_4.5.0-3 libjs-underscore_1.13.3~dfsg+~1.11.4-1 libjson-c5_0.16-1 libk5crypto3_1.19.2-2 libkeyutils1_1.6.1-2ubuntu3 libkmod2_29-1ubuntu1 libkrb5-3_1.19.2-2 libkrb5support0_1.19.2-2 liblapack3_3.10.1-2 liblcms2-2_2.12~rc1-2build2 libldap-2.5-0_2.5.11+dfsg-1~exp1ubuntu3 liblockfile-bin_1.17-1build2 liblockfile1_1.17-1build2 liblsan0_12.1.0-2ubuntu1 liblz4-1_1.9.3-2build2 liblzma5_5.2.5-2.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmd0_1.0.4-1build1 libmount1_2.38-4ubuntu1 libmpc3_1.2.1-2build1 libmpdec3_2.5.1-2build2 libmpfr6_4.1.0-3build3 libncurses6_6.3+20220423-2 libncursesw6_6.3+20220423-2 libnettle8_3.7.3-1build2 libnghttp2-14_1.47.0-1 libnpth0_1.6-3build2 libnsl-dev_1.3.0-2build2 libnsl2_1.3.0-2build2 libopenjp2-7_2.4.0-6 libp11-kit0_0.24.1-1 libpam-modules_1.4.0-13ubuntu1 libpam-modules-bin_1.4.0-13ubuntu1 libpam-runtime_1.4.0-13ubuntu1 libpam0g_1.4.0-13ubuntu1 libpcre2-8-0_10.40-1 libpcre3_2:8.39-14 libperl5.34_5.34.0-3ubuntu1 libpipeline1_1.5.6-1 libpng16-16_1.6.37-5 libprocps8_2:3.3.17-6ubuntu2 libpsl5_0.21.0-1.2build2 libpython3-stdlib_3.10.4-0ubuntu2 libpython3.10-minimal_3.10.4-4 libpython3.10-stdlib_3.10.4-4 libquadmath0_12.1.0-2ubuntu1 libraqm0_0.7.0-4ubuntu1 libreadline8_8.1.2-1.2 librtmp1_2.4+20151223.gitfa8646d.1-2build4 libsasl2-2_2.1.28+dfsg-6ubuntu1 libsasl2-modules-db_2.1.28+dfsg-6ubuntu1 libseccomp2_2.5.4-1ubuntu1 libselinux1_3.3-1build2 libsemanage-common_3.3-1build2 libsemanage2_3.3-1build2 libsepol2_3.3-1build1 libsigsegv2_2.13-1ubuntu3 libsmartcols1_2.38-4ubuntu1 libsqlite3-0_3.38.5-1 libss2_1.46.5-2ubuntu1 libssh-4_0.9.6-2build1 libssl3_3.0.3-0ubuntu1 libstdc++-11-dev_11.3.0-3ubuntu1 libstdc++6_12.1.0-2ubuntu1 libsub-override-perl_0.09-2 libsystemd0_249.11-0ubuntu3.1 libtasn1-6_4.18.0-4build1 libtiff5_4.4.0~rc1-1 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.2-2build1 libtirpc-dev_1.3.2-2build1 libtirpc3_1.3.2-2build1 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pinentry-curses_1.2.0-1ubuntu1 pkgbinarymangler_149 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3 procps_2:3.3.17-6ubuntu2 python-babel-localedata_2.8.0+dfsg.1-7 python3_3.10.4-0ubuntu2 python3-alabaster_0.7.12-1 python3-all_3.10.4-0ubuntu2 python3-babel_2.8.0+dfsg.1-7 python3-biopython_1.79+dfsg-3 python3-certifi_2020.6.20-1 python3-chardet_4.0.0-2 python3-charset-normalizer_2.0.6-2 python3-commonmark_0.9.1-4 python3-dateutil_2.8.1-6 python3-distutils_3.10.4-0ubuntu1 python3-docutils_0.17.1+dfsg-2 python3-idna_3.3-1 python3-imagesize_1.3.0-1 python3-importlib-metadata_4.6.4-1 python3-jinja2_3.0.3-1 python3-lib2to3_3.10.4-0ubuntu1 python3-markupsafe_2.0.1-2build1 python3-minimal_3.10.4-0ubuntu2 python3-more-itertools_8.10.0-2 python3-numpy_1:1.21.5-1build2 python3-packaging_21.3-1 python3-pandas_1.3.5+dfsg-4 python3-pandas-lib_1.3.5+dfsg-4 python3-pil_9.1.1-1 python3-pkg-resources_59.6.0-1.2 python3-pybedtools_0.9.0-1build1 python3-pygments_2.11.2+dfsg-2 python3-pyparsing_3.0.7-2 python3-pysam_0.17.0+ds-2build1 python3-recommonmark_0.7.1+ds-1 python3-renderpm_3.6.9-1 python3-reportlab_3.6.9-1 python3-reportlab-accel_3.6.9-1 python3-requests_2.27.1+dfsg-1ubuntu1 python3-roman_3.3-1 python3-setuptools_59.6.0-1.2 python3-six_1.16.0-3ubuntu1 python3-snowballstemmer_2.2.0-1build1 python3-sphinx_4.5.0-3 python3-tz_2022.1-1 python3-urllib3_1.26.9-1 python3-zipp_1.0.0-3 python3.10_3.10.4-4 python3.10-minimal_3.10.4-4 readline-common_8.1.2-1.2 rpcsvc-proto_1.4.2-0ubuntu6 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1ubuntu2 sensible-utils_0.0.17 sgml-base_1.30 sphinx-common_4.5.0-3 systemd_249.11-0ubuntu3.1 systemd-sysv_249.11-0ubuntu3.1 sysvinit-utils_3.01-1ubuntu1 tar_1.34+dfsg-1build3 tzdata_2022a-0ubuntu1 ubuntu-keyring_2021.03.26 usrmerge_25ubuntu2 util-linux_2.38-4ubuntu1 util-linux-extra_2.38-4ubuntu1 w3c-sgml-lib_1.3-3 xml-core_0.18+nmu1 xz-utils_5.2.5-2.1 zlib1g_1:1.2.11.dfsg-2ubuntu9 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mirtop Binary: python3-mirtop, mirtop Architecture: all Version: 0.4.25-1 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Karolis Kalantojus Homepage: https://github.com/miRTop/mirtop Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/mirtop Vcs-Git: https://salsa.debian.org/med-team/mirtop.git Testsuite: autopkgtest, autopkgtest-pkg-python Testsuite-Triggers: bedtools, python3-all, python3-nose, samtools, seqan-apps Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-sphinx, python3-recommonmark, python3-pysam, python3-pybedtools, python3-pandas, python3-biopython Package-List: mirtop deb science optional arch=all python3-mirtop deb python optional arch=all Checksums-Sha1: df09ff3cc1b29e319f52c367a2ee4203b56a6592 720205 mirtop_0.4.25.orig.tar.gz 5025d22f38d6cf70f2f391ac8b7fda21fd6b3706 6176 mirtop_0.4.25-1.debian.tar.xz Checksums-Sha256: 5888c2dfc26551cdfd0536a45a09d3430c2e63bfaec21a861caefc4bec2d6b1e 720205 mirtop_0.4.25.orig.tar.gz 5cf5ed4372e5874d07bdd7ca103db3bbdfca02e1297e2a2d7ab42e8198145001 6176 mirtop_0.4.25-1.debian.tar.xz Files: dff3f5d5e325c7fc26a96c1ac57fcf8d 720205 mirtop_0.4.25.orig.tar.gz b4007c5eee1d5fdc17151ac3bfd6cef6 6176 mirtop_0.4.25-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmKTd+USHG5pbGVzaEBk ZWJpYW4ub3JnAAoJEAC650s0M2nx1soQAJJyztDZCKmPdpGYqR/yp6ON9yUlk4hJ alXDgzZ3fE1oPCCIrhK0s71QXGV/4lT5iBiWpQ66K9Iz2wRBW8jUSOz9cvY2Ev2u uvAimU679a4auqHbmjAquFsxT+k09xxoFFURRMZyCp5UMaj/bxowWp24Rtq6h1/u MnCsnaOlxXuaCmnYcSzOnyMMFWjkUS9o0ZGwEw1bXYbUSLoGgCFu7t6l7NrGSj/m Q2dGo8MXoAdELoEl9BVOnGuGx5bvXRURuxbczgX7RlYZ7lHUaLySMJXUS1yNBxQH 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fix-circular-import.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-23796159 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-23796159 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-23796159 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -b -rfakeroot dpkg-buildpackage: info: source package mirtop dpkg-buildpackage: info: source version 0.4.25-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from mirtop-0.4.25/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ fakeroot debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild install -d /<>/debian/.debhelper/generated/_source/home pybuild --clean -i python{version} -p 3.10 I: pybuild base:239: python3.10 setup.py clean running clean removing '/<>/.pybuild/cpython3_3.10_mirtop/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.10' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-mirtop.substvars debian/mirtop.substvars ./mirtop/version.py debian/files rm -fr -- debian/python3-mirtop/ debian/tmp/ debian/mirtop/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild install -d /<>/debian/.debhelper/generated/_source/home pybuild --configure -i python{version} -p 3.10 I: pybuild base:239: python3.10 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build pybuild --build -i python{version} -p 3.10 I: pybuild base:239: /usr/bin/python3 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop copying mirtop/install.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop copying mirtop/__init__.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop copying mirtop/command_line.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop copying mirtop/version.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop creating /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter copying mirtop/exporter/__init__.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter copying mirtop/exporter/isomirs.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter copying mirtop/exporter/vcf.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter copying mirtop/exporter/fasta.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter copying mirtop/exporter/seqbuster.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter creating /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer copying mirtop/importer/__init__.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer copying mirtop/importer/prost.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer copying mirtop/importer/manatee.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer copying mirtop/importer/optimir.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer copying mirtop/importer/isomirsea.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer copying mirtop/importer/seqbuster.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer copying mirtop/importer/srnabench.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer creating /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/bam copying mirtop/bam/__init__.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/bam copying mirtop/bam/filter.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/bam copying mirtop/bam/bam.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/bam creating /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/__init__.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/merge.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/body.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/compare.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/check.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/update.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/read.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/stats.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/gff_versions.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/validator.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/query.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/classgff.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/header.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff copying mirtop/gff/convert.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff creating /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna copying mirtop/mirna/__init__.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna copying mirtop/mirna/snps.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna copying mirtop/mirna/mapper.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna copying mirtop/mirna/fasta.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna copying mirtop/mirna/annotate.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna copying mirtop/mirna/realign.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna copying mirtop/mirna/keys.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna copying mirtop/mirna/mintplates.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna creating /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/sql copying mirtop/sql/__init__.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/sql copying mirtop/sql/sql.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/sql creating /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/__init__.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/sql.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/do.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/logger.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/utils.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/simulator.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/config.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/read.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/spikeins.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/fastq.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs copying mirtop/libs/parse.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs running egg_info creating mirtop.egg-info writing mirtop.egg-info/PKG-INFO writing dependency_links to mirtop.egg-info/dependency_links.txt writing entry points to mirtop.egg-info/entry_points.txt writing top-level names to mirtop.egg-info/top_level.txt writing manifest file 'mirtop.egg-info/SOURCES.txt' reading manifest file 'mirtop.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'mirtop.egg-info/SOURCES.txt' PYTHONPATH=. python3 -m sphinx -N -bman docs/ build/man # Manpage generator Running Sphinx v4.5.0 making output directory... done WARNING: html_static_path entry '_static' does not exist building [mo]: targets for 0 po files that are out of date building [man]: all manpages updating environment: [new config] 11 added, 0 changed, 0 removed reading sources... [ 9%] CONTRIBUTING reading sources... [ 18%] code /<>/mirtop/mirna/mintplates.py:512: SyntaxWarning: "is" with a literal. Did you mean "=="? if prefix is '': reading sources... [ 27%] code_structure reading sources... [ 36%] competition reading sources... [ 45%] how_to_contribute reading sources... [ 54%] index reading sources... [ 63%] installation reading sources... [ 72%] issue_template reading sources... [ 81%] output reading sources... [ 90%] quick_start reading sources... [100%] sql_usage /<>/mirtop/gff/body.py:docstring of mirtop.gff.body.lift_to_genome:7: ERROR: Unexpected indentation. /<>/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.hits:1: WARNING: duplicate object description of mirtop.mirna.realign.hits, other instance in code, use :noindex: for one of them /<>/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir, other instance in code, use :noindex: for one of them /<>/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.format:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.format, other instance in code, use :noindex: for one of them /<>/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.formatGFF:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.formatGFF, other instance in code, use :noindex: for one of them /<>/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.format_id:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.format_id, other instance in code, use :noindex: for one of them /<>/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.get_score:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.get_score, other instance in code, use :noindex: for one of them /<>/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.is_iso:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.is_iso, other instance in code, use :noindex: for one of them /<>/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.set_pos:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.set_pos, other instance in code, use :noindex: for one of them /<>/docs/code_structure.md:5: ERROR: Unexpected indentation. /<>/docs/code_structure.md:6: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/docs/code_structure.md:12: ERROR: Unexpected indentation. /<>/docs/code_structure.md:13: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/docs/code_structure.md:24: ERROR: Unexpected indentation. /<>/docs/code_structure.md:25: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/docs/code_structure.md:39: WARNING: Bullet list ends without a blank line; unexpected unindent. /<>/docs/how_to_contribute.md:10: WARNING: Bullet list ends without a blank line; unexpected unindent. /<>/docs/how_to_contribute.md:15: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:30: ERROR: Unexpected indentation. /<>/docs/how_to_contribute.md:31: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/docs/how_to_contribute.md:31: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:31: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/how_to_contribute.md:38: ERROR: Unexpected indentation. /<>/docs/how_to_contribute.md:36: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:42: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/docs/how_to_contribute.md:42: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:42: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/how_to_contribute.md:54: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:54: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/how_to_contribute.md:56: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/docs/how_to_contribute.md:56: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:56: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/how_to_contribute.md:62: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:62: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/how_to_contribute.md:64: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/docs/how_to_contribute.md:64: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:64: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/how_to_contribute.md:90: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:90: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/how_to_contribute.md:89: ERROR: Unexpected indentation. /<>/docs/how_to_contribute.md:92: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:92: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/how_to_contribute.md:109: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:109: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/how_to_contribute.md:101: ERROR: Unexpected indentation. /<>/docs/how_to_contribute.md:104: ERROR: Unexpected indentation. /<>/docs/how_to_contribute.md:107: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/docs/how_to_contribute.md:111: WARNING: Inline literal start-string without end-string. /<>/docs/how_to_contribute.md:111: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/installation.md:21: WARNING: Inline literal start-string without end-string. /<>/docs/installation.md:35: WARNING: Inline literal start-string without end-string. /<>/docs/installation.md:35: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/sql_usage.md:14: ERROR: Unexpected indentation. /<>/docs/sql_usage.md:7: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:26: WARNING: Option list ends without a blank line; unexpected unindent. /<>/docs/sql_usage.md:35: ERROR: Unexpected indentation. /<>/docs/sql_usage.md:36: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/docs/sql_usage.md:51: ERROR: Unexpected indentation. /<>/docs/sql_usage.md:58: ERROR: Unexpected indentation. /<>/docs/sql_usage.md:62: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:115: ERROR: Unexpected indentation. /<>/docs/sql_usage.md:113: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:121: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/docs/sql_usage.md:121: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:121: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/sql_usage.md:135: ERROR: Unexpected indentation. /<>/docs/sql_usage.md:132: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:148: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/docs/sql_usage.md:148: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:148: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/sql_usage.md:156: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:195: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:195: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/sql_usage.md:201: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:219: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:219: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/sql_usage.md:229: ERROR: Unexpected indentation. /<>/docs/sql_usage.md:227: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:230: WARNING: Block quote ends without a blank line; unexpected unindent. /<>/docs/sql_usage.md:234: WARNING: Definition list ends without a blank line; unexpected unindent. /<>/docs/sql_usage.md:234: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:238: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:245: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:245: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/sql_usage.md:358: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:364: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:364: WARNING: Inline interpreted text or phrase reference start-string without end-string. /<>/docs/sql_usage.md:387: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:397: WARNING: Inline literal start-string without end-string. /<>/docs/sql_usage.md:397: WARNING: Inline interpreted text or phrase reference start-string without end-string. looking for now-outdated files... none found pickling environment... done checking consistency... /<>/docs/CONTRIBUTING.md: WARNING: document isn't included in any toctree /<>/docs/issue_template.md: WARNING: document isn't included in any toctree /<>/docs/sql_usage.md: WARNING: document isn't included in any toctree done writing... mirtop.1 { competition installation quick_start output code_structure how_to_contribute code } done build succeeded, 94 warnings. The manual pages are in build/man. make[1]: Leaving directory '/<>' rm -f debian/mirtop.debhelper.log debian/python3-mirtop.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/<>' # No tests, yet Not testing. make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python3,sphinxdoc --buildsystem=pybuild dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-mirtop.substvars debian/mirtop.substvars rm -fr -- debian/.debhelper/generated/python3-mirtop/ debian/python3-mirtop/ debian/tmp/ debian/.debhelper/generated/mirtop/ debian/mirtop/ dh_auto_install -O--buildsystem=pybuild install -d /<>/debian/tmp pybuild --install -i python{version} -p 3.10 --dest-dir /<>/debian/tmp I: pybuild base:239: /usr/bin/python3 setup.py install --root /<>/debian/python3-mirtop running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py copying mirtop/version.py -> /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop running egg_info writing mirtop.egg-info/PKG-INFO writing dependency_links to mirtop.egg-info/dependency_links.txt writing entry points to mirtop.egg-info/entry_points.txt writing top-level names to mirtop.egg-info/top_level.txt reading manifest file 'mirtop.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'mirtop.egg-info/SOURCES.txt' running install_lib creating /<>/debian/python3-mirtop creating /<>/debian/python3-mirtop/usr creating /<>/debian/python3-mirtop/usr/lib creating /<>/debian/python3-mirtop/usr/lib/python3.10 creating /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages creating /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/install.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/__init__.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/command_line.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop creating /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter/__init__.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter/isomirs.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter/vcf.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter/fasta.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/exporter/seqbuster.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter creating /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer/__init__.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer/prost.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer/manatee.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer/optimir.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer/isomirsea.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer/seqbuster.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/importer/srnabench.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer creating /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/bam copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/bam/__init__.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/bam copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/bam/filter.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/bam copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/bam/bam.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/bam creating /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/__init__.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/merge.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/body.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/compare.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/check.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/update.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/read.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/stats.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/gff_versions.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/validator.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/query.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/classgff.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/header.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/gff/convert.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff creating /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna/__init__.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna/snps.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna/mapper.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna/fasta.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna/annotate.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna/realign.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna/keys.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/mirna/mintplates.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/version.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop creating /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/sql copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/sql/__init__.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/sql copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/sql/sql.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/sql creating /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/__init__.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/sql.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/do.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/logger.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/utils.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/simulator.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/config.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/read.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/spikeins.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/fastq.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs copying /<>/.pybuild/cpython3_3.10_mirtop/build/mirtop/libs/parse.py -> /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/install.py to install.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/command_line.py to command_line.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter/isomirs.py to isomirs.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter/vcf.py to vcf.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter/fasta.py to fasta.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/exporter/seqbuster.py to seqbuster.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer/prost.py to prost.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer/manatee.py to manatee.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer/optimir.py to optimir.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer/isomirsea.py to isomirsea.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer/seqbuster.py to seqbuster.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/importer/srnabench.py to srnabench.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/bam/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/bam/filter.py to filter.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/bam/bam.py to bam.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/merge.py to merge.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/body.py to body.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/compare.py to compare.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/check.py to check.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/update.py to update.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/read.py to read.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/stats.py to stats.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/gff_versions.py to gff_versions.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/validator.py to validator.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/query.py to query.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/classgff.py to classgff.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/header.py to header.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/gff/convert.py to convert.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna/snps.py to snps.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna/mapper.py to mapper.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna/fasta.py to fasta.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna/annotate.py to annotate.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna/realign.py to realign.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna/keys.py to keys.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/mirna/mintplates.py to mintplates.cpython-310.pyc /usr/lib/python3.10/dist-packages/mirtop/mirna/mintplates.py:512: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/version.py to version.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/sql/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/sql/sql.py to sql.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/__init__.py to __init__.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/sql.py to sql.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/do.py to do.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/logger.py to logger.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/utils.py to utils.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/simulator.py to simulator.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/config.py to config.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/read.py to read.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/spikeins.py to spikeins.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/fastq.py to fastq.cpython-310.pyc byte-compiling /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop/libs/parse.py to parse.cpython-310.pyc running install_egg_info Copying mirtop.egg-info to /<>/debian/python3-mirtop/usr/lib/python3.10/dist-packages/mirtop-0.4.25.egg-info Skipping SOURCES.txt running install_scripts Installing mirtop script to /<>/debian/python3-mirtop/usr/bin debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install install -d debian/.debhelper/generated/python3-mirtop install -d debian/mirtop/usr/bin cp --reflink=auto -a ./debian/python3-mirtop/usr/bin/mirtop debian/mirtop/usr/bin/ install -d debian/.debhelper/generated/mirtop rm debian/python3-mirtop/usr/bin/mirtop make[1]: Leaving directory '/<>' dh_installdocs -O--buildsystem=pybuild install -d debian/python3-mirtop/usr/share/doc/python3-mirtop cp --reflink=auto -a ./README.md debian/python3-mirtop/usr/share/doc/python3-mirtop cp --reflink=auto -a ./debian/README.test debian/python3-mirtop/usr/share/doc/python3-mirtop cp --reflink=auto -a ./debian/tests/run-unit-test debian/python3-mirtop/usr/share/doc/python3-mirtop chown -R 0:0 debian/python3-mirtop/usr/share/doc chmod -R u\+rw,go=rX debian/python3-mirtop/usr/share/doc install -p -m0644 debian/copyright debian/python3-mirtop/usr/share/doc/python3-mirtop/copyright install -d debian/mirtop/usr/share/doc/mirtop install -p -m0644 debian/copyright debian/mirtop/usr/share/doc/mirtop/copyright dh_sphinxdoc -O--buildsystem=pybuild dh_sphinxdoc: warning: Sphinx documentation not found dh_installchangelogs -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python3-mirtop/usr/share/doc/python3-mirtop/changelog.Debian install -p -m0644 debian/changelog debian/mirtop/usr/share/doc/mirtop/changelog.Debian dh_installman -O--buildsystem=pybuild install -d debian/mirtop/usr/share/man/man1/ install -p -m0644 ./build/man/mirtop.1 debian/mirtop/usr/share/man/man1/mirtop.1 man-recode --to-code UTF-8 --suffix .dh-new debian/mirtop/usr/share/man/man1/mirtop.1 mv debian/mirtop/usr/share/man/man1/mirtop.1.dh-new debian/mirtop/usr/share/man/man1/mirtop.1 chmod 0644 -- debian/mirtop/usr/share/man/man1/mirtop.1 dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 5.20220403 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:165: supported Python versions: 3.10 (default=3.10) D: dh_python3 debhelper:169: source=mirtop, binary packages=['python3-mirtop', 'mirtop'] D: dh_python3 dh_python3:183: processing package python3-mirtop... D: dh_python3 fs:52: moving files from debian/python3-mirtop/usr/lib/python3.10/dist-packages to debian/python3-mirtop/usr/lib/python3/dist-packages/ D: dh_python3 fs:399: package python3-mirtop details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-mirtop D: dh_python3 depends:281: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python3 dh_python3:183: processing package mirtop... D: dh_python3 fs:399: package mirtop details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package mirtop D: dh_python3 depends:281: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild cd debian/mirtop cd debian/python3-mirtop chmod a-x usr/share/doc/python3-mirtop/changelog.Debian chmod a-x usr/share/doc/mirtop/changelog.Debian usr/share/man/man1/mirtop.1 gzip -9nf usr/share/doc/python3-mirtop/changelog.Debian gzip -9nf usr/share/doc/mirtop/changelog.Debian usr/share/man/man1/mirtop.1 cd '/<>' cd '/<>' dh_fixperms -O--buildsystem=pybuild find debian/python3-mirtop -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/mirtop -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/mirtop ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-mirtop ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/mirtop/usr/share/doc -type f -a -true -a ! -regex 'debian/mirtop/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/mirtop/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-mirtop/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-mirtop/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/mirtop/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-mirtop/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/mirtop -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-mirtop -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/mirtop/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-mirtop/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -d debian/python3-mirtop/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-mirtop/DEBIAN/postinst cat debian/python3-mirtop.postinst.debhelper >> debian/python3-mirtop/DEBIAN/postinst chmod 0755 -- debian/python3-mirtop/DEBIAN/postinst chown 0:0 -- debian/python3-mirtop/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-mirtop/DEBIAN/prerm cat debian/python3-mirtop.prerm.debhelper >> debian/python3-mirtop/DEBIAN/prerm chmod 0755 -- debian/python3-mirtop/DEBIAN/prerm chown 0:0 -- debian/python3-mirtop/DEBIAN/prerm install -d debian/mirtop/DEBIAN dh_gencontrol -O--buildsystem=pybuild echo misc:Depends= >> debian/python3-mirtop.substvars echo misc:Pre-Depends= >> debian/python3-mirtop.substvars dpkg-gencontrol -ppython3-mirtop -ldebian/changelog -Tdebian/python3-mirtop.substvars -Pdebian/python3-mirtop echo misc:Depends= >> debian/mirtop.substvars echo misc:Pre-Depends= >> debian/mirtop.substvars dpkg-gencontrol -pmirtop -ldebian/changelog -Tdebian/mirtop.substvars -Pdebian/mirtop dpkg-gencontrol: warning: Depends field of package python3-mirtop: substitution variable ${sphinxdoc:Depends} used, but is not defined chmod 0644 -- debian/python3-mirtop/DEBIAN/control chown 0:0 -- debian/python3-mirtop/DEBIAN/control chmod 0644 -- debian/mirtop/DEBIAN/control chown 0:0 -- debian/mirtop/DEBIAN/control dh_md5sums -O--buildsystem=pybuild cd debian/mirtop >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-mirtop >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-mirtop/DEBIAN/md5sums chown 0:0 -- debian/python3-mirtop/DEBIAN/md5sums chmod 0644 -- debian/mirtop/DEBIAN/md5sums chown 0:0 -- debian/mirtop/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --build debian/python3-mirtop .. dpkg-deb --build debian/mirtop .. INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 pkgstriptranslations: processing mirtop (in debian/mirtop); do_strip: , oemstrip: pkgstriptranslations: processing python3-mirtop (in debian/python3-mirtop); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mirtop/DEBIAN/control, package mirtop, directory debian/mirtop INFO: pkgstripfiles: waiting for lock (mirtop) ... pkgstripfiles: processing control file: debian/python3-mirtop/DEBIAN/control, package python3-mirtop, directory debian/python3-mirtop pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-mirtop ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-mirtop' in '../python3-mirtop_0.4.25-1_all.deb'. Searching for duplicated docs in dependency python3-mirtop... symlinking changelog.Debian.gz in mirtop to file in python3-mirtop pkgstripfiles: Running PNG optimization (using 4 cpus) for package mirtop ... pkgstripfiles: No PNG files. dpkg-deb: building package 'mirtop' in '../mirtop_0.4.25-1_all.deb'. dpkg-genbuildinfo --build=binary -O../mirtop_0.4.25-1_amd64.buildinfo dpkg-genchanges --build=binary -mLaunchpad Build Daemon -O../mirtop_0.4.25-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from mirtop-0.4.25/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-05-29T17:21:33Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mirtop_0.4.25-1_amd64.changes: ------------------------------ Format: 1.8 Date: Sun, 29 May 2022 11:23:26 +0530 Source: mirtop Binary: mirtop python3-mirtop Built-For-Profiles: noudeb Architecture: all Version: 0.4.25-1 Distribution: kinetic-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Nilesh Patra Description: mirtop - annotate miRNAs with a standard mirna/isomir naming python3-mirtop - annotate miRNAs with a standard mirna/isomir naming (Python 3) Changes: mirtop (0.4.25-1) unstable; urgency=medium . * Team upload. * New upstream version 0.4.25 * Bump Standards-Version to 4.6.1 (no changes needed) Checksums-Sha1: ca22627bf2dcaf763bbea40f25aaf399c5a46c62 13142 mirtop_0.4.25-1_all.deb 09a92b0832898e19f7a375fd9a07e51df7babfb4 9496 mirtop_0.4.25-1_amd64.buildinfo 4c13b3d5b26542e20a4967e3f5f711075a845dbe 61314 python3-mirtop_0.4.25-1_all.deb Checksums-Sha256: 59f712aebde5e198fbdb6281ac18cb781c68c6f9099da3906849b58dc89ef778 13142 mirtop_0.4.25-1_all.deb 20f9438ff649ced0939d91fb8897817c0de5f50c8cdb20a6251d9911ae02f5dd 9496 mirtop_0.4.25-1_amd64.buildinfo a4a629c9580fcc67164dc23583fc5cad09b15754998276bf55b60beac5e280f8 61314 python3-mirtop_0.4.25-1_all.deb Files: 689ab72aa979ba21dcf4595e3e682f22 13142 science optional mirtop_0.4.25-1_all.deb c5f755889839e5fc82028868763bcf6a 9496 science optional mirtop_0.4.25-1_amd64.buildinfo 85ee2299b645d5b5cd793b8d6e29f3b0 61314 python optional python3-mirtop_0.4.25-1_all.deb /<>/mirtop_0.4.25-1_amd64.changes.new could not be renamed to /<>/mirtop_0.4.25-1_amd64.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: mirtop Binary: mirtop python3-mirtop Architecture: all Version: 0.4.25-1 Checksums-Md5: 689ab72aa979ba21dcf4595e3e682f22 13142 mirtop_0.4.25-1_all.deb 85ee2299b645d5b5cd793b8d6e29f3b0 61314 python3-mirtop_0.4.25-1_all.deb Checksums-Sha1: ca22627bf2dcaf763bbea40f25aaf399c5a46c62 13142 mirtop_0.4.25-1_all.deb 4c13b3d5b26542e20a4967e3f5f711075a845dbe 61314 python3-mirtop_0.4.25-1_all.deb Checksums-Sha256: 59f712aebde5e198fbdb6281ac18cb781c68c6f9099da3906849b58dc89ef778 13142 mirtop_0.4.25-1_all.deb a4a629c9580fcc67164dc23583fc5cad09b15754998276bf55b60beac5e280f8 61314 python3-mirtop_0.4.25-1_all.deb Build-Origin: Ubuntu Build-Architecture: amd64 Build-Date: Sun, 29 May 2022 17:21:33 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-4ubuntu4), autotools-dev (= 20220109.1), base-files (= 12ubuntu5), base-passwd (= 3.5.52build1), bash (= 5.1-6ubuntu1), binutils (= 2.38-4ubuntu1), binutils-common (= 2.38-4ubuntu1), binutils-x86-64-linux-gnu (= 2.38-4ubuntu1), bsdextrautils (= 2.38-4ubuntu1), bsdutils (= 1:2.38-4ubuntu1), build-essential (= 12.9ubuntu3), bzip2 (= 1.0.8-5build1), ca-certificates (= 20211016), coreutils (= 8.32-4.1ubuntu1), cpp (= 4:11.2.0-1ubuntu1), cpp-11 (= 11.3.0-3ubuntu1), dash (= 0.5.11+git20210903+057cd650a4ed-8), debconf (= 1.5.79ubuntu1), debhelper (= 13.7.1ubuntu1), debianutils (= 5.7-0.2), debugedit (= 1:5.0-4build1), dh-autoreconf (= 20), dh-python (= 5.20220403), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.8-0ubuntu2), docutils-common (= 0.17.1+dfsg-2), dpkg (= 1.21.8ubuntu1), dpkg-dev (= 1.21.8ubuntu1), dwz (= 0.14-1build2), file (= 1:5.41-4), findutils (= 4.8.0-1ubuntu3), fonts-urw-base35 (= 20200910-1), g++ (= 4:11.2.0-1ubuntu1), g++-11 (= 11.3.0-3ubuntu1), gcc (= 4:11.2.0-1ubuntu1), gcc-11 (= 11.3.0-3ubuntu1), gcc-11-base (= 11.3.0-3ubuntu1), gcc-12-base (= 12.1.0-2ubuntu1), gettext (= 0.21-4ubuntu4), gettext-base (= 0.21-4ubuntu4), grep (= 3.7-1build1), groff-base (= 1.22.4-8build1), gzip (= 1.10-4ubuntu4), hostname (= 3.23ubuntu2), init-system-helpers (= 1.63), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.3.0-3ubuntu1), libatomic1 (= 12.1.0-2ubuntu1), libattr1 (= 1:2.5.1-1build1), libaudit-common (= 1:3.0.7-1build1), libaudit1 (= 1:3.0.7-1build1), libbinutils (= 2.38-4ubuntu1), libblas3 (= 3.10.1-2), libblkid1 (= 2.38-4ubuntu1), libbrotli1 (= 1.0.9-2build6), libbsd0 (= 0.11.6-1), libbz2-1.0 (= 1.0.8-5build1), libc-bin (= 2.35-0ubuntu3), libc-dev-bin (= 2.35-0ubuntu3), libc6 (= 2.35-0ubuntu3), libc6-dev (= 2.35-0ubuntu3), libcap-ng0 (= 0.7.9-2.2build3), libcap2 (= 1:2.44-1build3), libcc1-0 (= 12.1.0-2ubuntu1), libcom-err2 (= 1.46.5-2ubuntu1), libcrypt-dev (= 1:4.4.27-1), libcrypt1 (= 1:4.4.27-1), libctf-nobfd0 (= 2.38-4ubuntu1), libctf0 (= 2.38-4ubuntu1), libcurl3-gnutls (= 7.83.1-1), libdb5.3 (= 5.3.28+dfsg1-0.9), libdebconfclient0 (= 0.261ubuntu1), libdebhelper-perl (= 13.7.1ubuntu1), libdeflate0 (= 1.10-2), libdpkg-perl (= 1.21.8ubuntu1), libdw1 (= 0.187-1), libelf1 (= 0.187-1), libexpat1 (= 2.4.8-1), libffi8 (= 3.4.2-4), libfile-stripnondeterminism-perl (= 1.13.0-1), libfreetype6 (= 2.12.1+dfsg-2), libfribidi0 (= 1.0.8-2ubuntu3.1), libgcc-11-dev (= 11.3.0-3ubuntu1), libgcc-s1 (= 12.1.0-2ubuntu1), libgcrypt20 (= 1.10.1-2ubuntu1), libgdbm-compat4 (= 1.23-1), libgdbm6 (= 1.23-1), libgfortran5 (= 12.1.0-2ubuntu1), libglib2.0-0 (= 2.72.1-1), libgmp10 (= 2:6.2.1+dfsg-3ubuntu1), libgnutls30 (= 3.7.4-2ubuntu1), libgomp1 (= 12.1.0-2ubuntu1), libgpg-error0 (= 1.45-2), libgraphite2-3 (= 1.3.14-1build2), libgssapi-krb5-2 (= 1.19.2-2), libharfbuzz0b (= 2.7.4-1ubuntu4), libhogweed6 (= 3.7.3-1build2), libhts3 (= 1.13+ds-2build2), libhtscodecs2 (= 1.2.1-1), libicu71 (= 71.1-3), libidn2-0 (= 2.3.2-2build1), libimagequant0 (= 2.17.0-1), libisl23 (= 0.24-2build1), libitm1 (= 12.1.0-2ubuntu1), libjbig0 (= 2.1-3.1build3), libjpeg-turbo8 (= 2.1.2-0ubuntu1), libjpeg8 (= 8c-2ubuntu10), libjs-jquery (= 3.6.0+dfsg+~3.5.13-1), libjs-sphinxdoc (= 4.5.0-3), libjs-underscore (= 1.13.3~dfsg+~1.11.4-1), libk5crypto3 (= 1.19.2-2), libkeyutils1 (= 1.6.1-2ubuntu3), libkrb5-3 (= 1.19.2-2), libkrb5support0 (= 1.19.2-2), liblapack3 (= 3.10.1-2), liblcms2-2 (= 2.12~rc1-2build2), libldap-2.5-0 (= 2.5.11+dfsg-1~exp1ubuntu3), liblsan0 (= 12.1.0-2ubuntu1), liblz4-1 (= 1.9.3-2build2), liblzma5 (= 5.2.5-2.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmd0 (= 1.0.4-1build1), libmount1 (= 2.38-4ubuntu1), libmpc3 (= 1.2.1-2build1), libmpdec3 (= 2.5.1-2build2), libmpfr6 (= 4.1.0-3build3), libncursesw6 (= 6.3+20220423-2), libnettle8 (= 3.7.3-1build2), libnghttp2-14 (= 1.47.0-1), libnsl-dev (= 1.3.0-2build2), libnsl2 (= 1.3.0-2build2), libopenjp2-7 (= 2.4.0-6), libp11-kit0 (= 0.24.1-1), libpam-modules (= 1.4.0-13ubuntu1), libpam-modules-bin (= 1.4.0-13ubuntu1), libpam-runtime (= 1.4.0-13ubuntu1), libpam0g (= 1.4.0-13ubuntu1), libpcre2-8-0 (= 10.40-1), libpcre3 (= 2:8.39-14), libperl5.34 (= 5.34.0-3ubuntu1), libpipeline1 (= 1.5.6-1), libpng16-16 (= 1.6.37-5), libpsl5 (= 0.21.0-1.2build2), libpython3-stdlib (= 3.10.4-0ubuntu2), libpython3.10-minimal (= 3.10.4-4), libpython3.10-stdlib (= 3.10.4-4), libquadmath0 (= 12.1.0-2ubuntu1), libraqm0 (= 0.7.0-4ubuntu1), libreadline8 (= 8.1.2-1.2), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build4), libsasl2-2 (= 2.1.28+dfsg-6ubuntu1), libsasl2-modules-db (= 2.1.28+dfsg-6ubuntu1), libseccomp2 (= 2.5.4-1ubuntu1), libselinux1 (= 3.3-1build2), libsigsegv2 (= 2.13-1ubuntu3), libsmartcols1 (= 2.38-4ubuntu1), libsqlite3-0 (= 3.38.5-1), libssh-4 (= 0.9.6-2build1), libssl3 (= 3.0.3-0ubuntu1), libstdc++-11-dev (= 11.3.0-3ubuntu1), libstdc++6 (= 12.1.0-2ubuntu1), libsub-override-perl (= 0.09-2), libsystemd0 (= 249.11-0ubuntu3.1), libtasn1-6 (= 4.18.0-4build1), libtiff5 (= 4.4.0~rc1-1), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.2-2build1), libtirpc-dev (= 1.3.2-2build1), libtirpc3 (= 1.3.2-2build1), libtool (= 2.4.7-4), libtsan0 (= 11.3.0-3ubuntu1), libubsan1 (= 12.1.0-2ubuntu1), libuchardet0 (= 0.0.7-1build2), libudev1 (= 249.11-0ubuntu3.1), libunicode-escape-perl (= 0.0.2-4.1), libunicode-string-perl (= 2.10-1build5), libunistring2 (= 1.0-1), libuuid1 (= 2.38-4ubuntu1), libwebp7 (= 1.2.2-2), libwebpdemux2 (= 1.2.2-2), libwebpmux3 (= 1.2.2-2), libxau6 (= 1:1.0.9-1build5), libxcb1 (= 1.14-3ubuntu3), libxdmcp6 (= 1:1.1.3-0ubuntu5), libxml2 (= 2.9.14+dfsg-1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.15.0-28.29), login (= 1:4.11.1+dfsg1-2ubuntu1), lsb-base (= 11.1.0ubuntu4), lto-disabled-list (= 25), m4 (= 1.4.18-5ubuntu2), mailcap (= 3.70+nmu1ubuntu1), make (= 4.3-4.1build1), man-db (= 2.10.2-1), mawk (= 1.3.4.20200120-3), media-types (= 8.0.0), mime-support (= 3.66), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), openssl (= 3.0.3-0ubuntu1), patch (= 2.7.6-7build2), perl (= 5.34.0-3ubuntu1), perl-base (= 5.34.0-3ubuntu1), perl-modules-5.34 (= 5.34.0-3ubuntu1), po-debconf (= 1.0.21+nmu1), python-babel-localedata (= 2.8.0+dfsg.1-7), python3 (= 3.10.4-0ubuntu2), python3-alabaster (= 0.7.12-1), python3-all (= 3.10.4-0ubuntu2), python3-babel (= 2.8.0+dfsg.1-7), python3-biopython (= 1.79+dfsg-3), python3-certifi (= 2020.6.20-1), python3-chardet (= 4.0.0-2), python3-charset-normalizer (= 2.0.6-2), python3-commonmark (= 0.9.1-4), python3-dateutil (= 2.8.1-6), python3-distutils (= 3.10.4-0ubuntu1), python3-docutils (= 0.17.1+dfsg-2), python3-idna (= 3.3-1), python3-imagesize (= 1.3.0-1), python3-importlib-metadata (= 4.6.4-1), python3-jinja2 (= 3.0.3-1), python3-lib2to3 (= 3.10.4-0ubuntu1), python3-markupsafe (= 2.0.1-2build1), python3-minimal (= 3.10.4-0ubuntu2), python3-more-itertools (= 8.10.0-2), python3-numpy (= 1:1.21.5-1build2), python3-packaging (= 21.3-1), python3-pandas (= 1.3.5+dfsg-4), python3-pandas-lib (= 1.3.5+dfsg-4), python3-pil (= 9.1.1-1), python3-pkg-resources (= 59.6.0-1.2), python3-pybedtools (= 0.9.0-1build1), python3-pygments (= 2.11.2+dfsg-2), python3-pyparsing (= 3.0.7-2), python3-pysam (= 0.17.0+ds-2build1), python3-recommonmark (= 0.7.1+ds-1), python3-renderpm (= 3.6.9-1), python3-reportlab (= 3.6.9-1), python3-reportlab-accel (= 3.6.9-1), python3-requests (= 2.27.1+dfsg-1ubuntu1), python3-roman (= 3.3-1), python3-setuptools (= 59.6.0-1.2), python3-six (= 1.16.0-3ubuntu1), python3-snowballstemmer (= 2.2.0-1build1), python3-sphinx (= 4.5.0-3), python3-tz (= 2022.1-1), python3-urllib3 (= 1.26.9-1), python3-zipp (= 1.0.0-3), python3.10 (= 3.10.4-4), python3.10-minimal (= 3.10.4-4), readline-common (= 8.1.2-1.2), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.8-1ubuntu2), sensible-utils (= 0.0.17), sgml-base (= 1.30), sphinx-common (= 4.5.0-3), sysvinit-utils (= 3.01-1ubuntu1), tar (= 1.34+dfsg-1build3), tzdata (= 2022a-0ubuntu1), util-linux (= 2.38-4ubuntu1), util-linux-extra (= 2.38-4ubuntu1), w3c-sgml-lib (= 1.3-3), xml-core (= 0.18+nmu1), xz-utils (= 5.2.5-2.1), zlib1g (= 1:1.2.11.dfsg-2ubuntu9) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1653803606" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ mirtop_0.4.25-1_all.deb ----------------------- new Debian package, version 2.0. size 13142 bytes: control archive=924 bytes. 1171 bytes, 21 lines control 179 bytes, 3 lines md5sums Package: mirtop Version: 0.4.25-1 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 24 Depends: python3:any, python3-mirtop Section: science Priority: optional Homepage: https://github.com/miRTop/mirtop Description: annotate miRNAs with a standard mirna/isomir naming The main goal of this project is to create a reflection group on metazoan microRNAs (miRNAs), open to all interested researchers, to identify blockages and develop standards and guidelines to improve miRNA research, resources and communication. This can go through the use of standardized file formats, gene and variants nomenclature guidelines, and advancements in miRNA biology understanding. The group will eventually also aim at expanding its breadth to the development of novel tools, data resources, and best-practices guidelines to benefit the scientific community by providing high confidence validated research and analysis strategies, regardless the expertise in this field. This package provides the command line interface to mirtop. drwxr-xr-x root/root 0 2022-05-29 05:53 ./ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/bin/ -rwxr-xr-x root/root 956 2022-05-29 05:53 ./usr/bin/mirtop drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/share/ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/share/doc/mirtop/ lrwxrwxrwx root/root 0 2022-05-29 05:53 ./usr/share/doc/mirtop/changelog.Debian.gz -> ../python3-mirtop/changelog.Debian.gz -rw-r--r-- root/root 1430 2021-11-15 10:59 ./usr/share/doc/mirtop/copyright drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/share/man/ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/share/man/man1/ -rw-r--r-- root/root 10328 2022-05-29 05:53 ./usr/share/man/man1/mirtop.1.gz python3-mirtop_0.4.25-1_all.deb ------------------------------- new Debian package, version 2.0. size 61314 bytes: control archive=2897 bytes. 1273 bytes, 22 lines control 5579 bytes, 64 lines md5sums 263 bytes, 12 lines * postinst #!/bin/sh 407 bytes, 12 lines * prerm #!/bin/sh Package: python3-mirtop Source: mirtop Version: 0.4.25-1 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 338 Depends: python3:any, python3-pysam, python3-pybedtools, python3-pandas, python3-biopython Section: python Priority: optional Homepage: https://github.com/miRTop/mirtop Description: annotate miRNAs with a standard mirna/isomir naming (Python 3) The main goal of this project is to create a reflection group on metazoan microRNAs (miRNAs), open to all interested researchers, to identify blockages and develop standards and guidelines to improve miRNA research, resources and communication. This can go through the use of standardized file formats, gene and variants nomenclature guidelines, and advancements in miRNA biology understanding. The group will eventually also aim at expanding its breadth to the development of novel tools, data resources, and best-practices guidelines to benefit the scientific community by providing high confidence validated research and analysis strategies, regardless the expertise in this field. This package provides the Python modules for mirtop to execute correctly. drwxr-xr-x root/root 0 2022-05-29 05:53 ./ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/lib/ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/lib/python3/ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2022-05-29 05:53 ./usr/lib/python3/dist-packages/mirtop-0.4.25.egg-info/ -rw-r--r-- root/root 4038 2022-05-29 05:53 ./usr/lib/python3/dist-packages/mirtop-0.4.25.egg-info/PKG-INFO -rw-r--r-- root/root 1 2022-05-29 05:53 ./usr/lib/python3/dist-packages/mirtop-0.4.25.egg-info/dependency_links.txt -rw-r--r-- root/root 53 2022-05-29 05:53 ./usr/lib/python3/dist-packages/mirtop-0.4.25.egg-info/entry_points.txt -rw-r--r-- root/root 1 2022-05-29 05:53 ./usr/lib/python3/dist-packages/mirtop-0.4.25.egg-info/not-zip-safe -rw-r--r-- root/root 7 2022-05-29 05:53 ./usr/lib/python3/dist-packages/mirtop-0.4.25.egg-info/top_level.txt 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+------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: 5992 Build-Time: 7 Distribution: kinetic-proposed Host Architecture: amd64 Install-Time: 39 Job: mirtop_0.4.25-1.dsc Machine Architecture: amd64 Package: mirtop Package-Time: 47 Source-Version: 0.4.25-1 Space: 5992 Status: successful Version: 0.4.25-1 -------------------------------------------------------------------------------- Finished at 2022-05-29T17:21:33Z Build needed 00:00:47, 5992k disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=kinetic --arch=amd64 PACKAGEBUILD-23796159 Scanning for processes to kill in build PACKAGEBUILD-23796159