minimap2 2.17+dfsg-2 source package in Ubuntu

Changelog

minimap2 (2.17+dfsg-2) unstable; urgency=medium

  [ Michael R. Crusoe ]
  * Team upload.
  * Add support for more architectures using the SIMD Everyhere library
    Closes: #922620
  * Standards-Version: 4.4.1

  [ Andreas Tille ]
  * Set upstream metadata fields: Bug-Database, Bug-Submit.

 -- Michael R. Crusoe <email address hidden>  Sun, 12 Jan 2020 18:22:11 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal release universe misc

Downloads

File Size SHA-256 Checksum
minimap2_2.17+dfsg-2.dsc 2.0 KiB 1869ba8d83faecc3f157ddb4fb4535ca861780f1fa33366b97d5c434d56bdf70
minimap2_2.17+dfsg.orig.tar.xz 166.0 KiB cf24d57c2823048caf910d6a4ca8243e26c7e48aaf91b2aee27033ffbb13d3ae
minimap2_2.17+dfsg-2.debian.tar.xz 51.1 KiB e8bd0070234ef35566fa7bdef3bd268fda9cb63e81cd9469f995cb22fc54938d

Available diffs

No changes file available.

Binary packages built by this source

minimap2: versatile pairwise aligner for genomic and spliced nucleotide sequences

 Minimap2 is a versatile sequence alignment program that aligns DNA or
 mRNA sequences against a large reference database. Typical use cases
 include: (1) mapping PacBio or Oxford Nanopore genomic reads to the
 human genome; (2) finding overlaps between long reads with error rate up
 to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA
 or Direct RNA reads against a reference genome; (4) aligning Illumina
 single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full-
 genome alignment between two closely related species with divergence
 below ~15%.
 .
 For ~10kb noisy reads sequences, minimap2 is tens of times faster than
 mainstream long-read mappers such as BLASR, BWA-MEM, NGMLR and GMAP. It
 is more accurate on simulated long reads and produces biologically
 meaningful alignment ready for downstream analyses. For >100bp Illumina
 short reads, minimap2 is three times as fast as BWA-MEM and Bowtie2, and
 as accurate on simulated data. Detailed evaluations are available from
 the minimap2 paper or the preprint.

minimap2-dbgsym: debug symbols for minimap2