minimap2 2.15+dfsg-1 source package in Ubuntu


minimap2 (2.15+dfsg-1) unstable; urgency=medium

  * New upstream version
  * debhelper 12
  * Standards-Version: 4.3.0

 -- Andreas Tille <email address hidden>  Fri, 11 Jan 2019 22:40:39 +0100

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Uploaded by:
Debian Med on 2019-01-12
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

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Series Pocket Published Component Section
Disco release on 2019-01-12 universe misc


File Size SHA-256 Checksum
minimap2_2.15+dfsg-1.dsc 2.0 KiB 0f736f53de4ead2d438426e5f996672d824816f975813a5c275c186f4f50cd18
minimap2_2.15+dfsg.orig.tar.xz 163.3 KiB 4e15e5aea960714b3a425402c51efc42d216ace62eb6f06d9e40796723d4b041
minimap2_2.15+dfsg-1.debian.tar.xz 5.0 KiB 4e1ed74a9dbcca000204e82cd286b9fc3acf9b3be37be643d11505fdb8afe726

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Binary packages built by this source

minimap2: versatile pairwise aligner for genomic and spliced nucleotide sequences

 Minimap2 is a versatile sequence alignment program that aligns DNA or
 mRNA sequences against a large reference database. Typical use cases
 include: (1) mapping PacBio or Oxford Nanopore genomic reads to the
 human genome; (2) finding overlaps between long reads with error rate up
 to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA
 or Direct RNA reads against a reference genome; (4) aligning Illumina
 single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full-
 genome alignment between two closely related species with divergence
 below ~15%.
 For ~10kb noisy reads sequences, minimap2 is tens of times faster than
 mainstream long-read mappers such as BLASR, BWA-MEM, NGMLR and GMAP. It
 is more accurate on simulated long reads and produces biologically
 meaningful alignment ready for downstream analyses. For >100bp Illumina
 short reads, minimap2 is three times as fast as BWA-MEM and Bowtie2, and
 as accurate on simulated data. Detailed evaluations are available from
 the minimap2 paper or the preprint.

minimap2-dbgsym: debug symbols for minimap2