RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux lamiak 3.2.0-37-generic #58-Ubuntu SMP Thu Jan 24 15:28:10 UTC 2013 x86_64 Buildd toolchain package versions: launchpad-buildd_119~0.IS.08.04 python-lpbuildd_119~0.IS.08.04 bzr_2.5.1-0ubuntu2. Syncing the system clock with the buildd NTP service... 23 Oct 16:42:06 ntpdate[25629]: adjust time server 10.211.37.1 offset -0.000041 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-5140647', '/home/buildd/filecache-default/8cabf0d27c46c059cfb33227b40152ef510fbe4f'] Unpacking chroot for build PACKAGEBUILD-5140647 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-5140647'] Mounting chroot for build PACKAGEBUILD-5140647 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-5140647', 'deb http://ftpmaster.internal/ubuntu trusty main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-updates main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-proposed main restricted universe multiverse'] Overriding sources.list in build-PACKAGEBUILD-5140647 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-5140647', 'i386'] Updating debian chroot for build PACKAGEBUILD-5140647 Ign http://ftpmaster.internal trusty InRelease Ign http://ftpmaster.internal trusty-security InRelease Ign http://ftpmaster.internal trusty-updates InRelease Ign http://ftpmaster.internal trusty-proposed InRelease Get:1 http://ftpmaster.internal trusty Release.gpg [933 B] Get:2 http://ftpmaster.internal trusty-security Release.gpg [933 B] Ign http://archive-team.internal trusty InRelease Get:3 http://ftpmaster.internal trusty-updates Release.gpg [933 B] Ign http://archive-team.internal trusty Release.gpg Get:4 http://ftpmaster.internal trusty-proposed Release.gpg [933 B] Get:5 http://archive-team.internal trusty Release [723 B] Get:6 http://ftpmaster.internal trusty Release [49.6 kB] Get:7 http://archive-team.internal trusty/main i386 Packages Ign http://archive-team.internal trusty/main Translation-en Get:8 http://ftpmaster.internal trusty-security Release [49.6 kB] Get:9 http://ftpmaster.internal trusty-updates Release [49.6 kB] Get:10 http://ftpmaster.internal trusty-proposed Release [49.6 kB] Get:11 http://ftpmaster.internal trusty/main i386 Packages [1252 kB] Get:12 http://ftpmaster.internal trusty/restricted i386 Packages [9688 B] Get:13 http://ftpmaster.internal trusty/universe i386 Packages [5756 kB] Get:14 http://ftpmaster.internal trusty/multiverse i386 Packages [133 kB] Get:15 http://ftpmaster.internal trusty/main Translation-en [722 kB] Get:16 http://ftpmaster.internal trusty/multiverse Translation-en [101 kB] Get:17 http://ftpmaster.internal trusty/restricted Translation-en [2686 B] Get:18 http://ftpmaster.internal trusty/universe Translation-en [3960 kB] Get:19 http://ftpmaster.internal trusty-security/main i386 Packages [14 B] Get:20 http://ftpmaster.internal trusty-security/restricted i386 Packages [14 B] Get:21 http://ftpmaster.internal trusty-security/universe i386 Packages [14 B] Get:22 http://ftpmaster.internal trusty-security/multiverse i386 Packages [14 B] Get:23 http://ftpmaster.internal trusty-security/main Translation-en [14 B] Get:24 http://ftpmaster.internal trusty-security/multiverse Translation-en [14 B] Get:25 http://ftpmaster.internal trusty-security/restricted Translation-en [14 B] Get:26 http://ftpmaster.internal trusty-security/universe Translation-en [14 B] Get:27 http://ftpmaster.internal trusty-updates/main i386 Packages [14 B] Get:28 http://ftpmaster.internal trusty-updates/restricted i386 Packages [14 B] Get:29 http://ftpmaster.internal trusty-updates/universe i386 Packages [14 B] Get:30 http://ftpmaster.internal trusty-updates/multiverse i386 Packages [14 B] Get:31 http://ftpmaster.internal trusty-updates/main Translation-en [14 B] Get:32 http://ftpmaster.internal trusty-updates/multiverse Translation-en [14 B] Get:33 http://ftpmaster.internal trusty-updates/restricted Translation-en [14 B] Get:34 http://ftpmaster.internal trusty-updates/universe Translation-en [14 B] Get:35 http://ftpmaster.internal trusty-proposed/main i386 Packages [82.6 kB] Get:36 http://ftpmaster.internal trusty-proposed/restricted i386 Packages [14 B] Get:37 http://ftpmaster.internal trusty-proposed/universe i386 Packages [542 kB] Get:38 http://ftpmaster.internal trusty-proposed/multiverse i386 Packages [2702 B] Get:39 http://ftpmaster.internal trusty-proposed/main Translation-en [52.3 kB] Get:40 http://ftpmaster.internal trusty-proposed/multiverse Translation-en [9559 B] Get:41 http://ftpmaster.internal trusty-proposed/restricted Translation-en [14 B] Get:42 http://ftpmaster.internal trusty-proposed/universe Translation-en [374 kB] Fetched 13.2 MB in 7s (1883 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libdb5.3 libprocps1 The following packages will be upgraded: base-files base-passwd binutils busybox-initramfs bzip2 cpp-4.8 diffutils g++-4.8 gcc-4.8 gcc-4.8-base grep ifupdown iproute iproute2 libasan0 libatomic1 libbz2-1.0 libcloog-isl4 libdrm2 libgcc-4.8-dev libgcc1 libgomp1 libisl10 libitm1 libjson-c2 libjson0 libkeyutils1 libldap-2.4-2 libmpfr4 libpam-modules libpam-modules-bin libpam-runtime libpam0g libprocps0 libquadmath0 libselinux1 libsemanage-common libsemanage1 libsqlite3-0 libstdc++-4.8-dev libstdc++6 libudev1 perl perl-base perl-modules procps sed tar udev 49 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 44.8 MB of archives. After this operation, 4531 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files diffutils grep perl perl-base perl-modules bzip2 libbz2-1.0 sed tar base-passwd libitm1 libgomp1 gcc-4.8-base libstdc++6 libasan0 libatomic1 libquadmath0 cpp-4.8 binutils libstdc++-4.8-dev g++-4.8 gcc-4.8 libgcc-4.8-dev libgcc1 libcloog-isl4 libisl10 libmpfr4 libdb5.3 libpam0g libselinux1 libpam-modules-bin libpam-modules libsemanage-common libsemanage1 libsqlite3-0 libdrm2 libjson-c2 libprocps1 udev libudev1 libkeyutils1 libldap-2.4-2 libprocps0 libpam-runtime busybox-initramfs iproute2 ifupdown libjson0 procps iproute Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main base-files i386 6.12ubuntu5 [62.1 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main diffutils i386 1:3.3-1 [202 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main grep i386 2.14-4 [285 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty-proposed/main perl i386 5.18.1-4 [3731 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty-proposed/main perl-base i386 5.18.1-4 [1545 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty-proposed/main perl-modules all 5.18.1-4 [3926 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main bzip2 i386 1.0.6-5 [37.4 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main libbz2-1.0 i386 1.0.6-5 [33.9 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main sed i386 4.2.2-2ubuntu1 [141 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty-proposed/main tar i386 1.27-1 [231 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main base-passwd i386 3.5.28 [39.1 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libitm1 i386 4.8.2-1ubuntu2 [36.7 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main libgomp1 i386 4.8.2-1ubuntu2 [29.1 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8-base i386 4.8.2-1ubuntu2 [15.9 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++6 i386 4.8.2-1ubuntu2 [335 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libasan0 i386 4.8.2-1ubuntu2 [76.2 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libatomic1 i386 4.8.2-1ubuntu2 [9702 B] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main libquadmath0 i386 4.8.2-1ubuntu2 [218 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main cpp-4.8 i386 4.8.2-1ubuntu2 [5657 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main binutils i386 2.23.90.20131017-1ubuntu1 [3645 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++-4.8-dev i386 4.8.2-1ubuntu2 [1749 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main g++-4.8 i386 4.8.2-1ubuntu2 [8501 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8 i386 4.8.2-1ubuntu2 [6463 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main libgcc-4.8-dev i386 4.8.2-1ubuntu2 [2795 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main libgcc1 i386 1:4.8.2-1ubuntu2 [53.7 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main libcloog-isl4 i386 0.18.1-1 [68.1 kB] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main libisl10 i386 0.12.1-1 [540 kB] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main libmpfr4 i386 3.1.2-1 [197 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main libdb5.3 i386 5.3.21-2 [796 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main libpam0g i386 1.1.3-10ubuntu1 [61.0 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main libselinux1 i386 2.1.13-3 [65.7 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules-bin i386 1.1.3-10ubuntu1 [37.4 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules i386 1.1.3-10ubuntu1 [274 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main libsemanage-common all 2.1.10-3 [6586 B] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main libsemanage1 i386 2.1.10-3 [82.6 kB] Get:36 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libsqlite3-0 i386 3.8.0.2-1ubuntu1 [386 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main libdrm2 i386 2.4.46-3ubuntu1 [27.5 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main libjson-c2 i386 0.11-3ubuntu1 [24.3 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main libprocps1 i386 1:3.3.8-2ubuntu1 [34.2 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main udev i386 204-0ubuntu19 [1046 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main libudev1 i386 204-0ubuntu19 [37.2 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main libkeyutils1 i386 1.5.6-1 [7266 B] Get:43 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libldap-2.4-2 i386 2.4.31-1+nmu2ubuntu4 [182 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main libprocps0 i386 1:3.3.3-2ubuntu8 [34.0 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main libpam-runtime all 1.1.3-10ubuntu1 [40.9 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/main busybox-initramfs i386 1:1.20.0-9ubuntu2 [187 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main iproute2 i386 3.11.0-1 [523 kB] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main ifupdown i386 0.7.45ubuntu1 [57.1 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main libjson0 i386 0.11-3ubuntu1 [1010 B] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main procps i386 1:3.3.8-2ubuntu1 [241 kB] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main iproute all 1:3.11.0-1 [2324 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 44.8 MB in 3s (11.7 MB/s) (Reading database ... 12107 files and directories currently installed.) Preparing to replace base-files 6.12ubuntu4 (using .../base-files_6.12ubuntu5_i386.deb) ... Unpacking replacement base-files ... Setting up base-files (6.12ubuntu5) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/os-release ... (Reading database ... 12107 files and directories currently installed.) Preparing to replace diffutils 1:3.2-8 (using .../diffutils_1%3a3.3-1_i386.deb) ... Unpacking replacement diffutils ... Setting up diffutils (1:3.3-1) ... (Reading database ... 12107 files and directories currently installed.) Preparing to replace grep 2.14-3 (using .../archives/grep_2.14-4_i386.deb) ... Unpacking replacement grep ... Setting up grep (2.14-4) ... (Reading database ... 12107 files and directories currently installed.) Preparing to replace perl 5.14.2-21build1 (using .../perl_5.18.1-4_i386.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-21build1 (using .../perl-base_5.18.1-4_i386.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.18.1-4) ... (Reading database ... 12009 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-21build1 (using .../perl-modules_5.18.1-4_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace bzip2 1.0.6-4 (using .../bzip2_1.0.6-5_i386.deb) ... Unpacking replacement bzip2 ... Preparing to replace libbz2-1.0:i386 1.0.6-4 (using .../libbz2-1.0_1.0.6-5_i386.deb) ... Unpacking replacement libbz2-1.0:i386 ... Setting up libbz2-1.0:i386 (1.0.6-5) ... Processing triggers for libc-bin ... (Reading database ... 12046 files and directories currently installed.) Preparing to replace sed 4.2.2-1ubuntu1 (using .../sed_4.2.2-2ubuntu1_i386.deb) ... Unpacking replacement sed ... Setting up sed (4.2.2-2ubuntu1) ... (Reading database ... 12046 files and directories currently installed.) Preparing to replace tar 1.26+dfsg-8 (using .../archives/tar_1.27-1_i386.deb) ... Unpacking replacement tar ... Setting up tar (1.27-1) ... (Reading database ... 12047 files and directories currently installed.) Preparing to replace base-passwd 3.5.26 (using .../base-passwd_3.5.28_i386.deb) ... Unpacking replacement base-passwd ... Setting up base-passwd (3.5.28) ... (Reading database ... 12047 files and directories currently installed.) Preparing to replace libitm1:i386 4.8.1-10ubuntu8 (using .../libitm1_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement libitm1:i386 ... Preparing to replace libgomp1:i386 4.8.1-10ubuntu8 (using .../libgomp1_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement libgomp1:i386 ... Preparing to replace gcc-4.8-base:i386 4.8.1-10ubuntu8 (using .../gcc-4.8-base_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement gcc-4.8-base:i386 ... Setting up gcc-4.8-base:i386 (4.8.2-1ubuntu2) ... (Reading database ... 12047 files and directories currently installed.) Preparing to replace libstdc++6:i386 4.8.1-10ubuntu8 (using .../libstdc++6_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement libstdc++6:i386 ... Preparing to replace libgcc1:i386 1:4.8.1-10ubuntu8 (using .../libgcc1_1%3a4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement libgcc1:i386 ... Setting up libgcc1:i386 (1:4.8.2-1ubuntu2) ... Setting up libstdc++6:i386 (4.8.2-1ubuntu2) ... Processing triggers for libc-bin ... (Reading database ... 12047 files and directories currently installed.) Preparing to replace libasan0:i386 4.8.1-10ubuntu8 (using .../libasan0_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement libasan0:i386 ... Preparing to replace libatomic1:i386 4.8.1-10ubuntu8 (using .../libatomic1_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement libatomic1:i386 ... Preparing to replace libquadmath0:i386 4.8.1-10ubuntu8 (using .../libquadmath0_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement libquadmath0:i386 ... Preparing to replace cpp-4.8 4.8.1-10ubuntu8 (using .../cpp-4.8_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement cpp-4.8 ... Preparing to replace binutils 2.23.52.20130913-0ubuntu1 (using .../binutils_2.23.90.20131017-1ubuntu1_i386.deb) ... Unpacking replacement binutils ... Preparing to replace libstdc++-4.8-dev:i386 4.8.1-10ubuntu8 (using .../libstdc++-4.8-dev_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement libstdc++-4.8-dev:i386 ... Preparing to replace g++-4.8 4.8.1-10ubuntu8 (using .../g++-4.8_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement g++-4.8 ... Preparing to replace gcc-4.8 4.8.1-10ubuntu8 (using .../gcc-4.8_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement gcc-4.8 ... Preparing to replace libgcc-4.8-dev:i386 4.8.1-10ubuntu8 (using .../libgcc-4.8-dev_4.8.2-1ubuntu2_i386.deb) ... Unpacking replacement libgcc-4.8-dev:i386 ... Preparing to replace libcloog-isl4:i386 0.18.0-2 (using .../libcloog-isl4_0.18.1-1_i386.deb) ... Unpacking replacement libcloog-isl4:i386 ... Preparing to replace libisl10:i386 0.11.2-1 (using .../libisl10_0.12.1-1_i386.deb) ... Unpacking replacement libisl10:i386 ... Preparing to replace libmpfr4:i386 3.1.1-2 (using .../libmpfr4_3.1.2-1_i386.deb) ... Unpacking replacement libmpfr4:i386 ... Selecting previously unselected package libdb5.3:i386. Unpacking libdb5.3:i386 (from .../libdb5.3_5.3.21-2_i386.deb) ... Setting up libdb5.3:i386 (5.3.21-2) ... Processing triggers for libc-bin ... (Reading database ... 12054 files and directories currently installed.) Preparing to replace libpam0g:i386 1.1.3-8ubuntu3 (using .../libpam0g_1.1.3-10ubuntu1_i386.deb) ... Unpacking replacement libpam0g:i386 ... Setting up libpam0g:i386 (1.1.3-10ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 12054 files and directories currently installed.) Preparing to replace libselinux1:i386 2.1.13-2 (using .../libselinux1_2.1.13-3_i386.deb) ... Unpacking replacement libselinux1:i386 ... Setting up libselinux1:i386 (2.1.13-3) ... Processing triggers for libc-bin ... (Reading database ... 12054 files and directories currently installed.) Preparing to replace libpam-modules-bin 1.1.3-8ubuntu3 (using .../libpam-modules-bin_1.1.3-10ubuntu1_i386.deb) ... Unpacking replacement libpam-modules-bin ... Setting up libpam-modules-bin (1.1.3-10ubuntu1) ... (Reading database ... 12054 files and directories currently installed.) Preparing to replace libpam-modules:i386 1.1.3-8ubuntu3 (using .../libpam-modules_1.1.3-10ubuntu1_i386.deb) ... Unpacking replacement libpam-modules:i386 ... Setting up libpam-modules:i386 (1.1.3-10ubuntu1) ... (Reading database ... 12054 files and directories currently installed.) Preparing to replace libsemanage-common 2.1.10-2 (using .../libsemanage-common_2.1.10-3_all.deb) ... Unpacking replacement libsemanage-common ... Setting up libsemanage-common (2.1.10-3) ... Installing new version of config file /etc/selinux/semanage.conf ... (Reading database ... 12054 files and directories currently installed.) Preparing to replace libsemanage1:i386 2.1.10-2 (using .../libsemanage1_2.1.10-3_i386.deb) ... Unpacking replacement libsemanage1:i386 ... Setting up libsemanage1:i386 (2.1.10-3) ... Processing triggers for libc-bin ... (Reading database ... 12054 files and directories currently installed.) Preparing to replace libsqlite3-0:i386 3.7.17-1ubuntu1 (using .../libsqlite3-0_3.8.0.2-1ubuntu1_i386.deb) ... Unpacking replacement libsqlite3-0:i386 ... Preparing to replace libdrm2:i386 2.4.46-1 (using .../libdrm2_2.4.46-3ubuntu1_i386.deb) ... Unpacking replacement libdrm2:i386 ... Preparing to replace libjson-c2:i386 0.11-2ubuntu1 (using .../libjson-c2_0.11-3ubuntu1_i386.deb) ... Unpacking replacement libjson-c2:i386 ... Selecting previously unselected package libprocps1:i386. Unpacking libprocps1:i386 (from .../libprocps1_1%3a3.3.8-2ubuntu1_i386.deb) ... Preparing to replace udev 204-0ubuntu18 (using .../udev_204-0ubuntu19_i386.deb) ... Adding 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' Unpacking replacement udev ... Preparing to replace libudev1:i386 204-0ubuntu18 (using .../libudev1_204-0ubuntu19_i386.deb) ... Unpacking replacement libudev1:i386 ... Preparing to replace libkeyutils1:i386 1.5.5-7 (using .../libkeyutils1_1.5.6-1_i386.deb) ... Unpacking replacement libkeyutils1:i386 ... Preparing to replace libldap-2.4-2:i386 2.4.31-1+nmu2ubuntu3 (using .../libldap-2.4-2_2.4.31-1+nmu2ubuntu4_i386.deb) ... Unpacking replacement libldap-2.4-2:i386 ... Preparing to replace libprocps0:i386 1:3.3.3-2ubuntu7 (using .../libprocps0_1%3a3.3.3-2ubuntu8_i386.deb) ... Unpacking replacement libprocps0:i386 ... Preparing to replace libpam-runtime 1.1.3-8ubuntu3 (using .../libpam-runtime_1.1.3-10ubuntu1_all.deb) ... Unpacking replacement libpam-runtime ... Setting up libpam-runtime (1.1.3-10ubuntu1) ... (Reading database ... 12061 files and directories currently installed.) Preparing to replace busybox-initramfs 1:1.20.0-8.1ubuntu1 (using .../busybox-initramfs_1%3a1.20.0-9ubuntu2_i386.deb) ... Unpacking replacement busybox-initramfs ... Preparing to replace iproute2 3.10.0-1ubuntu1 (using .../iproute2_3.11.0-1_i386.deb) ... Unpacking replacement iproute2 ... Preparing to replace ifupdown 0.7.44ubuntu3 (using .../ifupdown_0.7.45ubuntu1_i386.deb) ... Unpacking replacement ifupdown ... Preparing to replace libjson0:i386 0.11-2ubuntu1 (using .../libjson0_0.11-3ubuntu1_i386.deb) ... Unpacking replacement libjson0:i386 ... Preparing to replace procps 1:3.3.3-2ubuntu7 (using .../procps_1%3a3.3.8-2ubuntu1_i386.deb) ... invoke-rc.d: policy-rc.d denied execution of stop. Unpacking replacement procps ... Preparing to replace iproute 1:3.10.0-1ubuntu1 (using .../iproute_1%3a3.11.0-1_all.deb) ... Unpacking replacement iproute ... Setting up bzip2 (1.0.6-5) ... Setting up libitm1:i386 (4.8.2-1ubuntu2) ... Setting up libgomp1:i386 (4.8.2-1ubuntu2) ... Setting up libasan0:i386 (4.8.2-1ubuntu2) ... Setting up libatomic1:i386 (4.8.2-1ubuntu2) ... Setting up libquadmath0:i386 (4.8.2-1ubuntu2) ... Setting up libisl10:i386 (0.12.1-1) ... Setting up libcloog-isl4:i386 (0.18.1-1) ... Setting up libmpfr4:i386 (3.1.2-1) ... Setting up cpp-4.8 (4.8.2-1ubuntu2) ... Setting up binutils (2.23.90.20131017-1ubuntu1) ... Setting up libgcc-4.8-dev:i386 (4.8.2-1ubuntu2) ... Setting up libstdc++-4.8-dev:i386 (4.8.2-1ubuntu2) ... Setting up gcc-4.8 (4.8.2-1ubuntu2) ... Setting up g++-4.8 (4.8.2-1ubuntu2) ... Setting up libsqlite3-0:i386 (3.8.0.2-1ubuntu1) ... Setting up libdrm2:i386 (2.4.46-3ubuntu1) ... Setting up libjson-c2:i386 (0.11-3ubuntu1) ... Setting up libprocps1:i386 (1:3.3.8-2ubuntu1) ... Setting up libudev1:i386 (204-0ubuntu19) ... Setting up udev (204-0ubuntu19) ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up libkeyutils1:i386 (1.5.6-1) ... Setting up libldap-2.4-2:i386 (2.4.31-1+nmu2ubuntu4) ... Setting up libprocps0:i386 (1:3.3.3-2ubuntu8) ... Setting up busybox-initramfs (1:1.20.0-9ubuntu2) ... Setting up iproute2 (3.11.0-1) ... Setting up ifupdown (0.7.45ubuntu1) ... Setting up libjson0:i386 (0.11-3ubuntu1) ... Setting up procps (1:3.3.8-2ubuntu1) ... Installing new version of config file /etc/init.d/procps ... Installing new version of config file /etc/sysctl.conf ... invoke-rc.d: policy-rc.d denied execution of start. Setting up iproute (1:3.11.0-1) ... Setting up perl-modules (5.18.1-4) ... Setting up perl (5.18.1-4) ... Processing triggers for libc-bin ... Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-5140647', 'i386', 'trusty-proposed', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty-proposed', '-A', '--purpose=PRIMARY', '--architecture=i386', '--comp=multiverse', 'mgltools-sff_1.5.7~rc1~cvs.20130519-2.dsc'] Initiating build PACKAGEBUILD-5140647 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.2.0-37-generic #58-Ubuntu SMP Thu Jan 24 15:28:10 UTC 2013 i686 Automatic build of mgltools-sff_1.5.7~rc1~cvs.20130519-2 on lamiak by sbuild/i386 1.170.5 Build started at 20131023-1643 ****************************************************************************** mgltools-sff_1.5.7~rc1~cvs.20130519-2.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8), python-all-dev (>= 2.6), swig (>= 1.3.20), python-numpy, mgltools-bhtree Checking for already installed source dependencies... debhelper: missing python-all-dev: missing swig: missing python-numpy: missing mgltools-bhtree: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper python-all-dev swig python-numpy mgltools-bhtree Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libprocps0 Use 'apt-get autoremove' to remove it. The following extra packages will be installed: apparmor-easyprof bsdmainutils dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libblas3 libcroco3 libexpat1 libexpat1-dev libffi6 libgfortran3 libglib2.0-0 liblapack3 libmagic1 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libunistring0 libxml2 man-db mime-support po-debconf python python-all python-dev python-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal swig2.0 Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser libmail-box-perl python-doc python-tk python-numpy-doc python-numpy-dbg python-nose gfortran python2.7-doc binfmt-support python3-doc python3-tk python3.3-doc swig-doc swig-examples swig2.0-examples swig2.0-doc Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl The following NEW packages will be installed: apparmor-easyprof bsdmainutils debhelper dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libblas3 libcroco3 libexpat1 libexpat1-dev libffi6 libgfortran3 libglib2.0-0 liblapack3 libmagic1 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libunistring0 libxml2 man-db mgltools-bhtree mime-support po-debconf python python-all python-all-dev python-dev python-minimal python-numpy python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal swig swig2.0 0 upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 47.0 MB of archives. After this operation, 110 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libffi6 libmagic1 libpython3.3-minimal mime-support libpython3.3-stdlib python3.3-minimal libasprintf0c2 libglib2.0-0 libpipeline1 libxml2 groff-base bsdmainutils man-db libcroco3 libgfortran3 libpython2.7-minimal libpython2.7-stdlib libpython2.7 libexpat1-dev libpython2.7-dev libunistring0 python2.7-minimal python3.3 python3-minimal libpython3-stdlib python3 dh-python file gettext-base gettext intltool-debian po-debconf apparmor-easyprof dh-apparmor debhelper libblas3 liblapack3 libpython-dev libpython-all-dev libpython-stdlib python2.7 python-minimal python python-numpy mgltools-bhtree python-all python2.7-dev python-dev python-all-dev swig2.0 swig Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1 i386 2.1.0-4 [127 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libffi6 i386 3.0.13-4 [15.9 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libmagic1 i386 5.11-2ubuntu4 [172 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-minimal i386 3.3.2-7ubuntu3 [612 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [31.7 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-stdlib i386 3.3.2-7ubuntu3 [2652 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main python3.3-minimal i386 3.3.2-7ubuntu3 [1667 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main libasprintf0c2 i386 0.18.3.1-1ubuntu1 [7120 B] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libglib2.0-0 i386 2.38.1-1 [988 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libpipeline1 i386 1.2.4-1 [26.5 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libxml2 i386 2.9.1+dfsg1-3ubuntu2 [672 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main groff-base i386 1.22.2-3 [705 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main bsdmainutils i386 9.0.5ubuntu1 [197 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main man-db i386 2.6.5-2 [704 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libcroco3 i386 0.6.8-2 [81.2 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libgfortran3 i386 4.8.2-1ubuntu2 [324 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-minimal i386 2.7.5-8ubuntu3 [505 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-stdlib i386 2.7.5-8ubuntu3 [2448 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7 i386 2.7.5-8ubuntu3 [1279 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1-dev i386 2.1.0-4 [204 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-dev i386 2.7.5-8ubuntu3 [23.2 MB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libunistring0 i386 0.9.3-5ubuntu1 [429 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-minimal i386 2.7.5-8ubuntu3 [1422 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main python3.3 i386 3.3.2-7ubuntu3 [129 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main python3-minimal i386 3.3.2-14ubuntu1 [26.8 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main libpython3-stdlib i386 3.3.2-14ubuntu1 [8144 B] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main python3 i386 3.3.2-14ubuntu1 [9172 B] Get:28 http://ftpmaster.internal/ubuntu/ trusty-proposed/main dh-python all 1.20131021-1 [62.1 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main file i386 5.11-2ubuntu4 [18.0 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main gettext-base i386 0.18.3.1-1ubuntu1 [55.2 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main gettext i386 0.18.3.1-1ubuntu1 [1007 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty-proposed/main apparmor-easyprof all 2.8.0-0ubuntu32 [23.3 kB] Get:35 http://ftpmaster.internal/ubuntu/ trusty-proposed/main dh-apparmor all 2.8.0-0ubuntu32 [7830 B] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main debhelper all 9.20130921ubuntu1 [635 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main libblas3 i386 1.2.20110419-7 [183 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main liblapack3 i386 3.4.2+dfsg-4 [2202 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main libpython-dev i386 2.7.5-5ubuntu1 [7870 B] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main libpython-all-dev i386 2.7.5-5ubuntu1 [946 B] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main libpython-stdlib i386 2.7.5-5ubuntu1 [7770 B] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main python2.7 i386 2.7.5-8ubuntu3 [192 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main python-minimal i386 2.7.5-5ubuntu1 [31.0 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main python i386 2.7.5-5ubuntu1 [168 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main python-numpy i386 1:1.7.1-1ubuntu1 [2017 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/multiverse mgltools-bhtree i386 1.5.7~rc1~cvs.20130519-1 [65.1 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main python-all i386 2.7.5-5ubuntu1 [932 B] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-dev i386 2.7.5-8ubuntu3 [288 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main python-dev i386 2.7.5-5ubuntu1 [1128 B] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main python-all-dev i386 2.7.5-5ubuntu1 [950 B] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main swig2.0 i386 2.0.10-0ubuntu2 [1137 kB] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main swig i386 2.0.10-0ubuntu2 [6668 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 47.0 MB in 3s (13.3 MB/s) Selecting previously unselected package libexpat1:i386. (Reading database ... 12062 files and directories currently installed.) Unpacking libexpat1:i386 (from .../libexpat1_2.1.0-4_i386.deb) ... Selecting previously unselected package libffi6:i386. Unpacking libffi6:i386 (from .../libffi6_3.0.13-4_i386.deb) ... Selecting previously unselected package libmagic1:i386. Unpacking libmagic1:i386 (from .../libmagic1_5.11-2ubuntu4_i386.deb) ... Selecting previously unselected package libpython3.3-minimal:i386. Unpacking libpython3.3-minimal:i386 (from .../libpython3.3-minimal_3.3.2-7ubuntu3_i386.deb) ... Selecting previously unselected package mime-support. Unpacking mime-support (from .../mime-support_3.54ubuntu1_all.deb) ... Selecting previously unselected package libpython3.3-stdlib:i386. Unpacking libpython3.3-stdlib:i386 (from .../libpython3.3-stdlib_3.3.2-7ubuntu3_i386.deb) ... Selecting previously unselected package python3.3-minimal. Unpacking python3.3-minimal (from .../python3.3-minimal_3.3.2-7ubuntu3_i386.deb) ... 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Selecting previously unselected package swig. Unpacking swig (from .../swig_2.0.10-0ubuntu2_i386.deb) ... Setting up libexpat1:i386 (2.1.0-4) ... Setting up libffi6:i386 (3.0.13-4) ... Setting up libmagic1:i386 (5.11-2ubuntu4) ... Setting up libpython3.3-minimal:i386 (3.3.2-7ubuntu3) ... Setting up mime-support (3.54ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up libpython3.3-stdlib:i386 (3.3.2-7ubuntu3) ... Setting up python3.3-minimal (3.3.2-7ubuntu3) ... Setting up libasprintf0c2:i386 (0.18.3.1-1ubuntu1) ... Setting up libglib2.0-0:i386 (2.38.1-1) ... No schema files found: doing nothing. Setting up libpipeline1:i386 (1.2.4-1) ... Setting up libxml2:i386 (2.9.1+dfsg1-3ubuntu2) ... Setting up groff-base (1.22.2-3) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libcroco3:i386 (0.6.8-2) ... Setting up libgfortran3:i386 (4.8.2-1ubuntu2) ... Setting up libpython2.7-minimal:i386 (2.7.5-8ubuntu3) ... Setting up libpython2.7-stdlib:i386 (2.7.5-8ubuntu3) ... Setting up libpython2.7:i386 (2.7.5-8ubuntu3) ... Setting up libexpat1-dev:i386 (2.1.0-4) ... Setting up libpython2.7-dev:i386 (2.7.5-8ubuntu3) ... Setting up libunistring0:i386 (0.9.3-5ubuntu1) ... Setting up python2.7-minimal (2.7.5-8ubuntu3) ... Linking and byte-compiling packages for runtime python2.7... Setting up python3.3 (3.3.2-7ubuntu3) ... Setting up python3-minimal (3.3.2-14ubuntu1) ... Setting up libpython3-stdlib:i386 (3.3.2-14ubuntu1) ... Setting up file (5.11-2ubuntu4) ... Setting up gettext-base (0.18.3.1-1ubuntu1) ... Setting up gettext (0.18.3.1-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up libblas3 (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up liblapack3 (3.4.2+dfsg-4) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libpython-dev:i386 (2.7.5-5ubuntu1) ... Setting up libpython-all-dev:i386 (2.7.5-5ubuntu1) ... Setting up libpython-stdlib:i386 (2.7.5-5ubuntu1) ... Setting up python2.7 (2.7.5-8ubuntu3) ... Setting up python-minimal (2.7.5-5ubuntu1) ... Setting up python (2.7.5-5ubuntu1) ... Setting up python-numpy (1:1.7.1-1ubuntu1) ... Setting up mgltools-bhtree (1.5.7~rc1~cvs.20130519-1) ... Setting up python-all (2.7.5-5ubuntu1) ... Setting up python2.7-dev (2.7.5-8ubuntu3) ... Setting up python-dev (2.7.5-5ubuntu1) ... Setting up python-all-dev (2.7.5-5ubuntu1) ... Setting up swig2.0 (2.0.10-0ubuntu2) ... Setting up swig (2.0.10-0ubuntu2) ... Setting up python3 (3.3.2-14ubuntu1) ... running python rtupdate hooks for python3.3... running python post-rtupdate hooks for python3.3... Setting up dh-python (1.20131021-1) ... Setting up apparmor-easyprof (2.8.0-0ubuntu32) ... Setting up dh-apparmor (2.8.0-0ubuntu32) ... Setting up debhelper (9.20130921ubuntu1) ... Processing triggers for libc-bin ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.17-93ubuntu4 make_3.81-8.2ubuntu3 dpkg-dev_1.16.12ubuntu1 gcc-4.8_4.8.2-1ubuntu2 g++-4.8_4.8.2-1ubuntu2 binutils_2.23.90.20131017-1ubuntu1 libstdc++-4.8-dev_4.8.2-1ubuntu2 libstdc++6_4.8.2-1ubuntu2 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Sat Aug 3 15:08:07 2013 UTC using DSA key ID 54B99890 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./mgltools-sff_1.5.7~rc1~cvs.20130519-2.dsc dpkg-source: info: extracting mgltools-sff in mgltools-sff-1.5.7~rc1~cvs.20130519 dpkg-source: info: unpacking mgltools-sff_1.5.7~rc1~cvs.20130519.orig.tar.gz dpkg-source: info: unpacking mgltools-sff_1.5.7~rc1~cvs.20130519-2.debian.tar.gz dpkg-buildpackage: source package mgltools-sff dpkg-buildpackage: source version 1.5.7~rc1~cvs.20130519-2 dpkg-source --before-build mgltools-sff-1.5.7~rc1~cvs.20130519 dpkg-buildpackage: host architecture i386 /usr/bin/fakeroot debian/rules clean dh clean --with python2 dh_testdir dh_auto_clean running clean 'build/lib.linux-i686-2.7' does not exist -- can't clean it 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it debian/rules override_dh_clean make[1]: Entering directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' dh_clean find . -name CVS -a -type d| xargs -r rm -r rm -rf build build-stamp debian/Pmv make[1]: Leaving directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' debian/rules build dh build --with python2 dh_testdir dh_auto_configure dh_auto_build running build running build_py creating build creating build/lib.linux-i686-2.7 creating build/lib.linux-i686-2.7/sff copying sff/__init__.py -> build/lib.linux-i686-2.7/sff copying sff/__init__.py -> build/lib.linux-i686-2.7/sff copying sff/amber.py -> build/lib.linux-i686-2.7/sff creating build/lib.linux-i686-2.7/sff/Tests copying sff/Tests/__init__.py -> build/lib.linux-i686-2.7/sff/Tests copying sff/Tests/tripepparmdict.py -> build/lib.linux-i686-2.7/sff/Tests copying sff/Tests/test.py -> build/lib.linux-i686-2.7/sff/Tests copying sff/Tests/p1H_crd.py -> build/lib.linux-i686-2.7/sff/Tests copying sff/Tests/test_dependencies.py -> build/lib.linux-i686-2.7/sff/Tests running build_ext building '_prmlib' extension swigging sff/prmlib.i to sff/prmlib_wrap.c swig -python -o sff/prmlib_wrap.c sff/prmlib.i creating build/temp.linux-i686-2.7 creating build/temp.linux-i686-2.7/src creating build/temp.linux-i686-2.7/sff i686-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/bhtree.c -o build/temp.linux-i686-2.7/src/bhtree.o src/bhtree.c: In function 'generateBHtree': src/bhtree.c:65:3: warning: implicit declaration of function 'malloc' [-Wimplicit-function-declaration] r=(BHtree *)malloc(sizeof(BHtree)); ^ src/bhtree.c:65:15: warning: incompatible implicit declaration of built-in function 'malloc' [enabled by default] r=(BHtree *)malloc(sizeof(BHtree)); ^ src/bhtree.c: In function 'freeBHtree': src/bhtree.c:176:5: warning: implicit declaration of function 'free' [-Wimplicit-function-declaration] for (i=0;iroot->n;i++) free(tree->atom[i]); ^ src/bhtree.c:176:35: warning: incompatible implicit declaration of built-in function 'free' [enabled by default] for (i=0;iroot->n;i++) free(tree->atom[i]); ^ src/bhtree.c:180:3: warning: incompatible implicit declaration of built-in function 'free' [enabled by default] free(tree); ^ src/bhtree.c: In function 'freeBHnode': src/bhtree.c:189:5: warning: incompatible implicit declaration of built-in function 'free' [enabled by default] free(node); ^ src/bhtree.c: In function 'divideBHnode': src/bhtree.c:230:24: warning: incompatible implicit declaration of built-in function 'malloc' [enabled by default] node->left=(BHnode *)malloc(sizeof(BHnode)); ^ src/bhtree.c: In function 'findBHcloseAtoms': src/bhtree.c:369:9: warning: unused variable 'n' [-Wunused-variable] int i,n; ^ i686-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/binpos.c -o build/temp.linux-i686-2.7/src/binpos.o In file included from src/binpos.c:2:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ src/binpos.c: In function 'openbinpos': src/binpos.c:15:2: warning: implicit declaration of function 'strcmp' [-Wimplicit-function-declaration] if( strcmp( magic, "fxyz" ) != 0 ){ ^ src/binpos.c: In function 'readbinpos': src/binpos.c:32:2: warning: implicit declaration of function 'strncmp' [-Wimplicit-function-declaration] if( 0 == strncmp( n_atomf,"fxyz",4 ) ) { ^ src/binpos.c:33:8: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread( n_atomf, size, 1, fp ); ^ src/binpos.c:29:11: warning: 'n_atomf' is used uninitialized in this function [-Wuninitialized] if( fread( n_atomf, sizeof( int ), 1, fp ) != 1 ) { ^ i686-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/memutil.c -o build/temp.linux-i686-2.7/src/memutil.o In file included from src/memutil.c:32:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ src/memutil.c:34:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void nrerror( msg ) ^ src/memutil.c:42:8: warning: function declaration isn't a prototype [-Wstrict-prototypes] float *vector( nl, nh ) ^ src/memutil.c:53:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ivector( nl, nh ) ^ src/memutil.c:64:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ipvector( nl, nh ) ^ src/memutil.c:76:9: warning: function declaration isn't a prototype [-Wstrict-prototypes] float **matrix( nrl, nrh, ncl, nch ) ^ src/memutil.c:104:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] int **imatrix( nrl, nrh, ncl, nch ) ^ src/memutil.c:132:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_vector( v, nl, nh ) ^ src/memutil.c:140:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_ivector( v, nl, nh ) ^ src/memutil.c:158:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_imatrix( m, nrl, nrh, ncl, nch ) ^ src/memutil.c:167:8: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL *Rvector( nl, nh ) ^ src/memutil.c:178:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_Rvector( v, nl, nh ) ^ i686-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/rand2.c -o build/temp.linux-i686-2.7/src/rand2.o src/rand2.c:55:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] float rand2( idum ) ^ src/rand2.c:96:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] float gauss( mean, sd, idum) ^ i686-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/conjgrad.c -o build/temp.linux-i686-2.7/src/conjgrad.o In file included from src/conjgrad.c:31:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ In file included from src/conjgrad.c:32:0: src/memutil.h:30:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void nrerror(); ^ src/memutil.h:31:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float *vector(); ^ src/memutil.h:32:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ivector(); ^ src/memutil.h:33:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ipvector(); ^ src/memutil.h:34:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float **matrix(); ^ src/memutil.h:35:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int **imatrix(); ^ src/memutil.h:36:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_vector(); ^ src/memutil.h:37:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_ivector(); ^ src/memutil.h:38:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_matrix(); ^ src/memutil.h:39:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_imatrix(); ^ src/conjgrad.c: In function 'conjgrad': src/conjgrad.c:44:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ( *func )(); ^ src/conjgrad.c:153:43: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (fch < (_REAL)0. || fch == (_REAL)0. && gnew / gmin >= (_REAL)-1.) { ^ src/conjgrad.c:85:22: warning: unused variable 'ivar' [-Wunused-variable] int niter, iobs, ivar, i, nfbeg, iterc, irsdg, igopt; ^ src/conjgrad.c:85:16: warning: unused variable 'iobs' [-Wunused-variable] int niter, iobs, ivar, i, nfbeg, iterc, irsdg, igopt; ^ src/conjgrad.c:84:16: warning: unused variable 'rho' [-Wunused-variable] _REAL fch, rho, sum; ^ src/conjgrad.c:82:23: warning: unused variable 'z' [-Wunused-variable] _REAL step, work, z, finit, ginit, gsqrd, gspln; ^ src/conjgrad.c:81:47: warning: unused variable 'drho' [-Wunused-variable] _REAL calc, gama, beta, fmin, gmin, dfpr, drho, gnew; ^ src/conjgrad.c:81:11: warning: unused variable 'calc' [-Wunused-variable] _REAL calc, gama, beta, fmin, gmin, dfpr, drho, gnew; ^ src/conjgrad.c:243:3: warning: 'iretry' may be used uninitialized in this function [-Wmaybe-uninitialized] ++iretry; ^ src/conjgrad.c:257:30: warning: 'iterrs' may be used uninitialized in this function [-Wmaybe-uninitialized] if (iterrs != 0 && iterc - iterrs < *n && (sum >= 0 ? sum : -sum) < gsqrd * (_REAL).2) { ^ src/conjgrad.c:208:8: warning: 'nfopt' may be used uninitialized in this function [-Wmaybe-uninitialized] if (niter > nfopt) { ^ src/conjgrad.c:220:23: warning: 'nfbeg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (niter > nfbeg + 1) { ^ src/conjgrad.c:206:17: warning: 'fch' may be used uninitialized in this function [-Wmaybe-uninitialized] work = (fch + fch) / stepch - gnew - gmin; ^ src/conjgrad.c:229:22: warning: 'sbound' may be used uninitialized in this function [-Wmaybe-uninitialized] stepch = (sbound - stmin) * (_REAL).5; ^ src/conjgrad.c:206:24: warning: 'stepch' may be used uninitialized in this function [-Wmaybe-uninitialized] work = (fch + fch) / stepch - gnew - gmin; ^ src/conjgrad.c:233:27: warning: 'ddspln' may be used uninitialized in this function [-Wmaybe-uninitialized] gspln = gmin + stepch * ddspln; ^ src/conjgrad.c:265:8: warning: 'gamden' may be used uninitialized in this function [-Wmaybe-uninitialized] gama /= gamden; ^ src/conjgrad.c:229:22: warning: 'stmin' may be used uninitialized in this function [-Wmaybe-uninitialized] stepch = (sbound - stmin) * (_REAL).5; ^ src/conjgrad.c:171:11: warning: 'gsqrd' may be used uninitialized in this function [-Wmaybe-uninitialized] stmin = *dfpred / gsqrd; ^ src/conjgrad.c:221:13: warning: 'ginit' may be used uninitialized in this function [-Wmaybe-uninitialized] if ((r__1 = gmin / ginit, ((r__1) >= 0 ? (r__1) : ^ src/conjgrad.c:250:8: warning: 'finit' may be used uninitialized in this function [-Wmaybe-uninitialized] if (*f < finit) iterfm = iterc; ^ src/conjgrad.c:206:10: warning: 'gmin' may be used uninitialized in this function [-Wmaybe-uninitialized] work = (fch + fch) / stepch - gnew - gmin; ^ src/conjgrad.c:151:7: warning: 'fmin' may be used uninitialized in this function [-Wmaybe-uninitialized] fch = *f - fmin; ^ i686-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/prm.c -o build/temp.linux-i686-2.7/src/prm.o In file included from src/prm.c:25:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ src/prm.c:32:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] extern int errno; ^ src/prm.c:53:1: warning: return type defaults to 'int' [-Wreturn-type] skipeoln(file) ^ src/prm.c:53:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] src/prm.c:75:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] iscompressed(name) ^ src/prm.c:99:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] genopen(name) ^ src/prm.c:173:1: warning: return type defaults to 'int' [-Wreturn-type] genclose(fileptr, popn) ^ src/prm.c:173:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] src/prm.c:191:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] get(size) ^ src/prm.c:216:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] preadln(file, name, string) ^ src/prm.c: In function 'readparm': src/prm.c:330:28: warning: unused variable 'fld' [-Wunused-variable] char buf[132], fld[20]; ^ src/prm.c:326:47: warning: variable 'atype' set but not used [-Wunused-but-set-variable] int i, k, idum, res, ifpert, iat, kat, lat, atype; ^ src/prm.c: At top level: src/prm.c:875:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] firstwat(prm) ^ src/prm.c: In function 'readcrdvec': src/prm.c:961:15: warning: unused variable 'n' [-Wunused-variable] int i, j, n; ^ src/prm.c: In function 'skipeoln': src/prm.c:64:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ src/prm.c: In function 'genclose': src/prm.c:183:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ src/prm.c: In function 'preadln': src/prm.c:236:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ src/prm.c: In function 'readparm': src/prm.c:351:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 80, file); ^ src/prm.c:365:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 80, file); ^ src/prm.c:395:8: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d %d %d", ^ src/prm.c:424:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Charges[i]); ^ src/prm.c:436:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %le", &prm->Masses[i]); ^ src/prm.c:447:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Iac[i]); ^ src/prm.c:455:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Iblo[i]); ^ src/prm.c:463:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Cno[i]); ^ src/prm.c:488:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Ipres[i]); ^ src/prm.c:498:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Rk[i]); ^ src/prm.c:510:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Req[i]); ^ src/prm.c:522:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Tk[i]); ^ src/prm.c:534:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Teq[i]); ^ src/prm.c:546:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Pk[i]); ^ src/prm.c:558:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Pn[i]); ^ src/prm.c:570:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Phase[i]); ^ src/prm.c:582:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Solty[i]); ^ src/prm.c:595:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Cn1[i]); ^ src/prm.c:608:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Cn2[i]); ^ src/prm.c:622:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d", ^ src/prm.c:634:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d", ^ src/prm.c:647:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d", ^ src/prm.c:661:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d", ^ src/prm.c:676:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d %d", ^ src/prm.c:691:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d %d", ^ src/prm.c:701:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->ExclAt[i]); ^ src/prm.c:710:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->HB12[i]); ^ src/prm.c:722:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->HB10[i]); ^ src/prm.c:735:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &H[i]); ^ src/prm.c:762:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->TreeJoin[i]); ^ src/prm.c:772:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->AtomRes[i]); ^ src/prm.c:790:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d", &prm->Iptres, &prm->Nspm, ^ src/prm.c:795:10: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Boundary[i]); ^ src/prm.c:798:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf %lf %lf", ^ src/prm.c:817:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %lf %lf %lf %lf", ^ i686-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/sff.c -o build/temp.linux-i686-2.7/src/sff.o In file included from src/sff.c:43:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ In file included from src/sff.c:44:0: src/memutil.h:30:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void nrerror(); ^ src/memutil.h:31:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float *vector(); ^ src/memutil.h:32:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ivector(); ^ src/memutil.h:33:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ipvector(); ^ src/memutil.h:34:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float **matrix(); ^ src/memutil.h:35:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int **imatrix(); ^ src/memutil.h:36:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_vector(); ^ src/memutil.h:37:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_ivector(); ^ src/memutil.h:38:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_matrix(); ^ src/memutil.h:39:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_imatrix(); ^ src/sff.c:76:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL second() ^ src/sff.c:88:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float gauss(); /* never double -bsd- */ ^ src/sff.c: In function 'mm_options': src/sff.c:207:11: warning: 'return' with no value, in function returning non-void [-Wreturn-type] if (!c) return; ^ src/sff.c: In function 'md_options': src/sff.c:246:11: warning: 'return' with no value, in function returning non-void [-Wreturn-type] if (!c) return; ^ src/sff.c: At top level: src/sff.c:289:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks() ^ src/sff.c: In function 'mme_init': src/sff.c:311:9: warning: unused variable 'rrad' [-Wunused-variable] _REAL rrad; ^ src/sff.c:310:18: warning: unused variable 'ip2' [-Wunused-variable] int i, j, ip1, ip2, nblimit; ^ src/sff.c:310:13: warning: unused variable 'ip1' [-Wunused-variable] int i, j, ip1, ip2, nblimit; ^ src/sff.c:310:10: warning: unused variable 'j' [-Wunused-variable] int i, j, ip1, ip2, nblimit; ^ src/sff.c: At top level: src/sff.c:417:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL econs( x, f, prm, opts ) ^ src/sff.c:440:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ebond( nbond, a1, a2, atype, Rk, Req, x, f ) ^ src/sff.c:471:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL eangl( nang, a1, a2, a3, atype, Tk, Teq, x, f ) ^ src/sff.c:542:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ephiRes( nphi, a1, a2, a3, a4, atype, Pk, Pn, Phase, x, start, end ) ^ src/sff.c: In function 'ephiRes': src/sff.c:550:44: warning: unused variable 'e3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:41: warning: unused variable 'e2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:38: warning: unused variable 'e1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:35: warning: unused variable 'd3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:32: warning: unused variable 'd2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:29: warning: unused variable 'd1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:8: warning: unused variable 'df' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:549:63: warning: variable 'dd4z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:58: warning: variable 'dd3z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:53: warning: variable 'dd2z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:48: warning: variable 'dd1z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:43: warning: variable 'dd4y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:38: warning: variable 'dd3y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:33: warning: variable 'dd2y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:28: warning: variable 'dd1y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:23: warning: variable 'dd4x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:18: warning: variable 'dd3x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:13: warning: variable 'dd2x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:8: warning: variable 'dd1x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c: At top level: src/sff.c:661:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ephi( nphi, a1, a2, a3, a4, atype, Pk, Pn, Phase, x, f ) ^ src/sff.c: In function 'ephi': src/sff.c:672:15: warning: unused variable 'in4' [-Wunused-variable] int rat, in1,in4; ^ src/sff.c:672:11: warning: unused variable 'in1' [-Wunused-variable] int rat, in1,in4; ^ src/sff.c:672:6: warning: unused variable 'rat' [-Wunused-variable] int rat, in1,in4; ^ src/sff.c:669:44: warning: unused variable 'e3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:41: warning: unused variable 'e2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:38: warning: unused variable 'e1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:35: warning: unused variable 'd3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:32: warning: unused variable 'd2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:29: warning: unused variable 'd1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c: At top level: src/sff.c:815:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nblist( x, npairs, pairlist, prm, cut, maxnb, frozen ) ^ src/sff.c: In function 'nblist': src/sff.c:828:9: warning: unused variable 'npairlist' [-Wunused-variable] int *npairlist; ^ src/sff.c:825:43: warning: unused variable 'jrescut' [-Wunused-variable] int k,jrp,jrp2,kpr, nbdist=0, irescut, jrescut; ^ src/sff.c:825:34: warning: unused variable 'irescut' [-Wunused-variable] int k,jrp,jrp2,kpr, nbdist=0, irescut, jrescut; ^ src/sff.c: At top level: src/sff.c:940:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nblistBH( x, npairs, pairlist, prm, cut, maxnb, frozen ) ^ src/sff.c: In function 'nblistBH': src/sff.c:951:9: warning: unused variable 'npairlist' [-Wunused-variable] int *npairlist; ^ src/sff.c:947:18: warning: unused variable 'rrw' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c:947:15: warning: unused variable 'dz' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c:947:12: warning: unused variable 'dy' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c:947:9: warning: unused variable 'dx' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c: At top level: src/sff.c:1085:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nbond( npairs, pairlist, x, f, enb, eel, ehb, enbfac, eelfac, prm, dield ) ^ src/sff.c: In function 'nbond': src/sff.c:1095:49: warning: unused variable 'eelt' [-Wunused-variable] _REAL dumx,dumy,dumz,cgi,xw1,xw2,xw3,r2inv,df2,eelt,r6,r10,f1,f2; ^ src/sff.c: In function 'getTor': src/sff.c:1298:19: warning: unused variable 'dum' [-Wunused-variable] _REAL eth, eta, dum; ^ src/sff.c: In function 'mme': src/sff.c:1340:79: warning: variable 'dum' set but not used [-Wunused-but-set-variable] _REAL ebh, eba, eth, eta, eph, epa, enb, ehb, eel, enb14, eel14, ecn, frms, dum; ^ src/sff.c: At top level: src/sff.c:1521:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ebond4( nbond, a1, a2, atype, Rk, Req, x, f ) ^ src/sff.c:1555:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL eangl4( nang, a1, a2, a3, atype, Tk, Teq, x, f ) ^ src/sff.c:1634:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ephi4( nphi, a1, a2, a3, a4, atype, Pk, Pn, Phase, x, f ) ^ src/sff.c: In function 'ephi4': src/sff.c:1643:44: warning: unused variable 'e3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:41: warning: unused variable 'e2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:38: warning: unused variable 'e1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:35: warning: unused variable 'd3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:32: warning: unused variable 'd2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:29: warning: unused variable 'd1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c: At top level: src/sff.c:1794:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nblist4( x, npairs, pairlist, prm, cut, maxnb, frozen ) ^ src/sff.c:1888:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nbond4( npairs, pairlist, x, f, enb, eel, enbfac, eelfac, prm ) ^ src/sff.c: In function 'nbond4': src/sff.c:1898:58: warning: unused variable 'eelt' [-Wunused-variable] _REAL dumx,dumy,dumz,dumw,cgi,xw1,xw2,xw3,xw4,r2inv,df2,eelt,r6,f1,f2; ^ src/sff.c: At top level: src/sff.c:1971:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL mme4( x, f, iter, prm, opts ) ^ src/sff.c: In function 'mme4': src/sff.c:1979:7: warning: variable 'nb_pairs' set but not used [-Wunused-but-set-variable] int nb_pairs; ^ src/sff.c: At top level: src/sff.c:2063:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int get_masses( minv, prm , dim) ^ src/sff.c: In function 'md': src/sff.c:2088:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ( *mme )(); ^ src/sff.c:2097:19: warning: unused variable 'k' [-Wunused-variable] int nstep, i, k; ^ src/sff.c:2096:50: warning: variable 'etot' set but not used [-Wunused-but-set-variable] _REAL dtx, dt5, rndf, dttp, ekin0, ekin, epot, etot, tscal, temp, sd; ^ src/sff.c:2096:14: warning: variable 'dt5' set but not used [-Wunused-but-set-variable] _REAL dtx, dt5, rndf, dttp, ekin0, ekin, epot, etot, tscal, temp, sd; ^ src/sff.c: At top level: src/sff.c:2192:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int mme_timer() ^ src/sff.c: In function 'nbond': src/sff.c:1267:16: warning: 'df2' may be used uninitialized in this function [-Wmaybe-uninitialized] df = (df2+(10.*f2-12.*f1)*enbfaci)*r2inv; ^ i686-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c sff/prmlib_wrap.c -o build/temp.linux-i686-2.7/sff/prmlib_wrap.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:15, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/oldnumeric.h:1, from sff/prmlib_wrap.c:2979: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" ^ In file included from sff/prmlib_wrap.c:2980:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ sff/prmlib_wrap.c: In function 'set_callback': sff/prmlib_wrap.c:3350:9: warning: unused variable 'name' [-Wunused-variable] char *name; ^ sff/prmlib_wrap.c:3349:7: warning: unused variable 'n' [-Wunused-variable] int n, freq=1, which; ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Charges_set': sff/prmlib_wrap.c:5367:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Masses_set': sff/prmlib_wrap.c:5417:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Rk_set': sff/prmlib_wrap.c:5467:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Req_set': sff/prmlib_wrap.c:5517:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Tk_set': sff/prmlib_wrap.c:5567:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Teq_set': sff/prmlib_wrap.c:5617:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Pk_set': sff/prmlib_wrap.c:5667:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Pn_set': sff/prmlib_wrap.c:5717:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Phase_set': sff/prmlib_wrap.c:5767:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Solty_set': sff/prmlib_wrap.c:5817:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Cn1_set': sff/prmlib_wrap.c:5867:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Cn2_set': sff/prmlib_wrap.c:5917:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_HB12_set': sff/prmlib_wrap.c:5967:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_HB10_set': sff/prmlib_wrap.c:6017:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Iac_set': sff/prmlib_wrap.c:6334:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Iblo_set': sff/prmlib_wrap.c:6384:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Cno_set': sff/prmlib_wrap.c:6434:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Ipres_set': sff/prmlib_wrap.c:6484:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_ExclAt_set': sff/prmlib_wrap.c:6534:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_TreeJoin_set': sff/prmlib_wrap.c:6584:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_AtomRes_set': sff/prmlib_wrap.c:6634:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_BondHAt1_set': sff/prmlib_wrap.c:6684:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_BondHAt2_set': sff/prmlib_wrap.c:6734:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_BondHNum_set': sff/prmlib_wrap.c:6784:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_BondAt1_set': sff/prmlib_wrap.c:6834:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_BondAt2_set': sff/prmlib_wrap.c:6884:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_BondNum_set': sff/prmlib_wrap.c:6934:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_AngleHAt1_set': sff/prmlib_wrap.c:6984:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_AngleHAt2_set': sff/prmlib_wrap.c:7034:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_AngleHAt3_set': sff/prmlib_wrap.c:7084:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_AngleHNum_set': sff/prmlib_wrap.c:7134:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_AngleAt1_set': sff/prmlib_wrap.c:7184:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_AngleAt2_set': sff/prmlib_wrap.c:7234:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_AngleAt3_set': sff/prmlib_wrap.c:7284:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_AngleNum_set': sff/prmlib_wrap.c:7334:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihHAt1_set': sff/prmlib_wrap.c:7384:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihHAt2_set': sff/prmlib_wrap.c:7434:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihHAt3_set': sff/prmlib_wrap.c:7484:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihHAt4_set': sff/prmlib_wrap.c:7534:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihHNum_set': sff/prmlib_wrap.c:7584:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihAt1_set': sff/prmlib_wrap.c:7634:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihAt2_set': sff/prmlib_wrap.c:7684:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihAt3_set': sff/prmlib_wrap.c:7734:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihAt4_set': sff/prmlib_wrap.c:7784:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_DihNum_set': sff/prmlib_wrap.c:7834:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_Boundary_set': sff/prmlib_wrap.c:7884:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_N14pairs_set': sff/prmlib_wrap.c:7934:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_parmstruct_N14pairlist_set': sff/prmlib_wrap.c:7984:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_SFFoptions_frozen_set': sff/prmlib_wrap.c:8405:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_SFFoptions_constrained_set': sff/prmlib_wrap.c:8507:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_SFFoptions_x0_set': sff/prmlib_wrap.c:8609:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_SFFoptions_npairs_set': sff/prmlib_wrap.c:8711:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_SFFoptions_pairlist_set': sff/prmlib_wrap.c:8761:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_readcrdvec': sff/prmlib_wrap.c:10188:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj2, (void**)&arg3, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_mme_init': sff/prmlib_wrap.c:10254:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj0, (void**)&arg1, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10259:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10264:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj2, (void**)&arg3, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_mme': sff/prmlib_wrap.c:10348:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj0, (void**)&arg1, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10353:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10358:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj2, (void**)&arg3, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10363:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj3, (void**)&arg4, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_conjgrad': sff/prmlib_wrap.c:10424:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj0, (void**)&arg1, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10429:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10434:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj2, (void**)&arg3, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10445:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj4, (void**)&arg5, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10450:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj5, (void**)&arg6, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10455:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj6, (void**)&arg7, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10465:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj8, (void**)&arg9, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_md': sff/prmlib_wrap.c:10535:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj2, (void**)&arg3, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10540:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj3, (void**)&arg4, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10545:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj4, (void**)&arg5, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10550:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj5, (void**)&arg6, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10561:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj7, (void**)&arg8, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_readbinpos': sff/prmlib_wrap.c:10813:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_writebinpos': sff/prmlib_wrap.c:10863:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj1, (void**)&arg2, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c: In function '_wrap_sanityCb': sff/prmlib_wrap.c:10994:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj2, (void**)&arg3, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ sff/prmlib_wrap.c:10999:5: warning: passing argument 3 of 'PyObject_AsWriteBuffer' from incompatible pointer type [enabled by default] if (PyObject_AsWriteBuffer( obj3, (void**)&arg4, &buffer_len)) ^ In file included from /usr/include/python2.7/Python.h:133:0, from sff/prmlib_wrap.c:125: /usr/include/python2.7/abstract.h:517:22: note: expected 'Py_ssize_t *' but argument is of type 'long int *' PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, ^ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-i686-2.7/src/bhtree.o build/temp.linux-i686-2.7/src/binpos.o build/temp.linux-i686-2.7/src/memutil.o build/temp.linux-i686-2.7/src/rand2.o build/temp.linux-i686-2.7/src/conjgrad.o build/temp.linux-i686-2.7/src/prm.o build/temp.linux-i686-2.7/src/sff.o build/temp.linux-i686-2.7/sff/prmlib_wrap.o -lm -o build/lib.linux-i686-2.7/sff/_prmlib.so dh_auto_test /usr/bin/fakeroot debian/rules binary dh binary --with python2 dh_testroot dh_prep dh_auto_install running install running build running build_py running build_ext running install_lib creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7 creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff copying build/lib.linux-i686-2.7/sff/__init__.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-i686-2.7/sff/Tests/__init__.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-i686-2.7/sff/Tests/tripepparmdict.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-i686-2.7/sff/Tests/test.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-i686-2.7/sff/Tests/p1H_crd.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-i686-2.7/sff/Tests/test_dependencies.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-i686-2.7/sff/_prmlib.so -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff copying build/lib.linux-i686-2.7/sff/amber.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff running install_data copying sff/Tests/p1H.pdb -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying sff/Tests/tripeptide.prm -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests running install_egg_info Writing /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff-1.5.6.egg-info debian/rules override_dh_install make[1]: Entering directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' dh_install dh_numpy make[1]: Leaving directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' dh_installdocs dh_installchangelogs dh_python2 dh_perl dh_link dh_compress dh_fixperms dh_strip dh_strip debug symbol extraction: all non-arch-all packages for this build platform i386: mgltools-sff dh_strip debug symbol extraction: packages to act on: mgltools-sff dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package mgltools-sff: unknown substitution variable ${python:Versions} dpkg-deb: building package `mgltools-sff-dbgsym' in `../mgltools-sff-dbgsym_1.5.7~rc1~cvs.20130519-2_i386.ddeb'. dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_md5sums dh_builddeb INFO: pkgstriptranslations version 118 pkgstriptranslations: processing mgltools-sff (in debian/mgltools-sff); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mgltools-sff/DEBIAN/control, package mgltools-sff, directory debian/mgltools-sff pkgstripfiles: Truncating usr/share/doc/mgltools-sff/changelog.Debian.gz to topmost ten records pkgstripfiles: PNG optimization for package mgltools-sff took 0 s dpkg-deb: warning: 'debian/mgltools-sff/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: 'debian/mgltools-sff/DEBIAN/control' contains user-defined field 'Python-Version' dpkg-deb: warning: ignoring 2 warnings about the control file(s) dpkg-deb: building package `mgltools-sff' in `../mgltools-sff_1.5.7~rc1~cvs.20130519-2_i386.deb'. dpkg-genchanges -b -mUbuntu/amd64 Build Daemon >../mgltools-sff_1.5.7~rc1~cvs.20130519-2_i386.changes dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build mgltools-sff-1.5.7~rc1~cvs.20130519 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20131023-1644 Publishing debug debs. chroot-autobuild/build/buildd/mgltools-sff_1.5.7~rc1~cvs.20130519-2_i386.deb: new debian package, version 2.0. size 89922 bytes: control archive= 1556 bytes. 1204 bytes, 24 lines control 1049 bytes, 14 lines md5sums 162 bytes, 9 lines * postinst #!/bin/sh 261 bytes, 14 lines * prerm #!/bin/sh Package: mgltools-sff Version: 1.5.7~rc1~cvs.20130519-2 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 349 Depends: libc6 (>= 2.7), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python (>= 2.7), python (<< 2.8), python:any (>= 2.7.1-0ubuntu2), mgltools-bhtree Enhances: autodocktools Section: non-free/science Priority: optional Homepage: http://mgltools.scripps.edu/ Description: Simple Force Field for Python This package is part of the mgltools set of Python libraries which provide an infrastructure for the analysis of protein structures and their docking of chemical compounds. . It implements an Amber force field with an interface to a molecular dynamics engine. SFF stands for simple force field. It is a C implementation of the amber force field made by Tom Macke and David Case. . This package exposes a wrapped version of the prm structure which holds the Amber parameters needed for an Amber calculation. It also exposes the mme and md functions to perform molecular mechanics and dynamics respectively. Python-Version: 2.7 chroot-autobuild/build/buildd/mgltools-sff_1.5.7~rc1~cvs.20130519-2_i386.deb: drwxr-xr-x root/root 0 2013-10-23 16:44 ./ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/lib/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/lib/pyshared/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/lib/pyshared/python2.7/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/lib/pyshared/python2.7/sff/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/Tests/ -rw-r--r-- root/root 220756 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/_prmlib.so drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/share/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/share/pyshared/ -rw-r--r-- root/root 336 2013-10-23 16:44 ./usr/share/pyshared/sff-1.5.6.egg-info drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/share/pyshared/sff/ -rw-r--r-- root/root 144 2006-03-09 22:03 ./usr/share/pyshared/sff/__init__.py drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/share/pyshared/sff/Tests/ -rw-r--r-- root/root 3534 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/p1H.pdb -rw-r--r-- root/root 1 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/__init__.py -rw-r--r-- root/root 16014 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/tripeptide.prm -rw-r--r-- root/root 15331 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/tripepparmdict.py -rw-r--r-- root/root 4955 2007-07-30 20:21 ./usr/share/pyshared/sff/Tests/test.py -rw-r--r-- root/root 1055 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/p1H_crd.py -rw-r--r-- root/root 838 2006-03-15 21:45 ./usr/share/pyshared/sff/Tests/test_dependencies.py -rw-r--r-- root/root 15007 2007-07-30 20:21 ./usr/share/pyshared/sff/amber.py drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-10-23 16:44 ./usr/share/doc/mgltools-sff/ -rw-r--r-- root/root 1417 2011-04-26 12:14 ./usr/share/doc/mgltools-sff/README.Debian -rw-r--r-- root/root 5989 2013-05-31 17:09 ./usr/share/doc/mgltools-sff/copyright -rw-r--r-- root/root 874 2013-10-23 16:44 ./usr/share/doc/mgltools-sff/changelog.Debian.gz lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/pyshared/python2.7/sff/_prmlib.so -> ../../../python2.7/dist-packages/sff/_prmlib.so lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff-1.5.6.egg-info -> ../../../share/pyshared/sff-1.5.6.egg-info lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/__init__.py -> ../../../../share/pyshared/sff/__init__.py lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/Tests/p1H.pdb -> ../../../../../share/pyshared/sff/Tests/p1H.pdb lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/Tests/__init__.py -> ../../../../../share/pyshared/sff/Tests/__init__.py lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/Tests/tripeptide.prm -> ../../../../../share/pyshared/sff/Tests/tripeptide.prm lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/Tests/tripepparmdict.py -> ../../../../../share/pyshared/sff/Tests/tripepparmdict.py lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/Tests/test.py -> ../../../../../share/pyshared/sff/Tests/test.py lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/Tests/p1H_crd.py -> ../../../../../share/pyshared/sff/Tests/p1H_crd.py lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/Tests/test_dependencies.py -> ../../../../../share/pyshared/sff/Tests/test_dependencies.py lrwxrwxrwx root/root 0 2013-10-23 16:44 ./usr/lib/python2.7/dist-packages/sff/amber.py -> ../../../../share/pyshared/sff/amber.py mgltools-sff_1.5.7~rc1~cvs.20130519-2_i386.changes: Format: 1.8 Date: Sat, 03 Aug 2013 16:00:00 +0200 Source: mgltools-sff Binary: mgltools-sff Architecture: i386 Version: 1.5.7~rc1~cvs.20130519-2 Distribution: trusty-proposed Urgency: low Maintainer: Ubuntu/amd64 Build Daemon Changed-By: Thorsten Alteholz Description: mgltools-sff - Simple Force Field for Python Changes: mgltools-sff (1.5.7~rc1~cvs.20130519-2) unstable; urgency=low . * new upload with different debian version (due to missing bhtree) Checksums-Sha1: c0af6dcfa085fc0d8c9dc3b2daaca7cae00cd9da 89922 mgltools-sff_1.5.7~rc1~cvs.20130519-2_i386.deb Checksums-Sha256: 3948026ac904cfba45c21352c89e93d39d16a2f461866ab5ad8907f7cb9fb191 89922 mgltools-sff_1.5.7~rc1~cvs.20130519-2_i386.deb Files: fe44b357b23432265121f56182e9cca2 89922 non-free/science optional mgltools-sff_1.5.7~rc1~cvs.20130519-2_i386.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20131023-1644 Build needed 00:00:14, 2792k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-5140647'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-5140647/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-5140647'] Unmounting chroot for build PACKAGEBUILD-5140647... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-5140647'] Removing build PACKAGEBUILD-5140647