RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux allspice 3.2.0-37-generic #58-Ubuntu SMP Thu Jan 24 15:28:10 UTC 2013 x86_64 Buildd toolchain package versions: launchpad-buildd_119~0.IS.08.04 python-lpbuildd_119~0.IS.08.04 bzr_2.5.1-0ubuntu2. Syncing the system clock with the buildd NTP service... 23 Oct 07:01:17 ntpdate[29117]: adjust time server 10.211.37.1 offset -0.000012 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-5140644', '/home/buildd/filecache-default/37b791c418443a1a9f244249f7640827adb86fb0'] Unpacking chroot for build PACKAGEBUILD-5140644 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-5140644'] Mounting chroot for build PACKAGEBUILD-5140644 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-5140644', 'deb http://ftpmaster.internal/ubuntu trusty main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-updates main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-proposed main restricted universe multiverse'] Overriding sources.list in build-PACKAGEBUILD-5140644 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-5140644', 'amd64'] Updating debian chroot for build PACKAGEBUILD-5140644 Ign http://ftpmaster.internal trusty InRelease Ign http://ftpmaster.internal trusty-security InRelease Ign http://archive-team.internal trusty InRelease Ign http://ftpmaster.internal trusty-updates InRelease Ign http://archive-team.internal trusty Release.gpg Ign http://ftpmaster.internal trusty-proposed InRelease Get:1 http://archive-team.internal trusty Release [730 B] Get:2 http://ftpmaster.internal trusty Release.gpg [933 B] Get:3 http://ftpmaster.internal trusty-security Release.gpg [933 B] Get:4 http://ftpmaster.internal trusty-updates Release.gpg [933 B] Get:5 http://ftpmaster.internal trusty-proposed Release.gpg [933 B] Get:6 http://ftpmaster.internal trusty Release [49.6 kB] Get:7 http://ftpmaster.internal trusty-security Release [49.6 kB] Get:8 http://ftpmaster.internal trusty-updates Release [49.6 kB] Get:9 http://archive-team.internal trusty/main amd64 Packages Get:10 http://ftpmaster.internal trusty-proposed Release [49.6 kB] Ign http://archive-team.internal trusty/main Translation-en Get:11 http://ftpmaster.internal trusty/main amd64 Packages [1253 kB] Get:12 http://ftpmaster.internal trusty/restricted amd64 Packages [9348 B] Get:13 http://ftpmaster.internal trusty/universe amd64 Packages [5682 kB] Get:14 http://ftpmaster.internal trusty/multiverse amd64 Packages [131 kB] Get:15 http://ftpmaster.internal trusty/main Translation-en [722 kB] Get:16 http://ftpmaster.internal trusty/multiverse Translation-en [101 kB] Get:17 http://ftpmaster.internal trusty/restricted Translation-en [2686 B] Get:18 http://ftpmaster.internal trusty/universe Translation-en [3913 kB] Get:19 http://ftpmaster.internal trusty-security/main amd64 Packages [14 B] Get:20 http://ftpmaster.internal trusty-security/restricted amd64 Packages [14 B] Get:21 http://ftpmaster.internal trusty-security/universe amd64 Packages [14 B] Get:22 http://ftpmaster.internal trusty-security/multiverse amd64 Packages [14 B] Get:23 http://ftpmaster.internal trusty-security/main Translation-en [14 B] Get:24 http://ftpmaster.internal trusty-security/multiverse Translation-en [14 B] Get:25 http://ftpmaster.internal trusty-security/restricted Translation-en [14 B] Get:26 http://ftpmaster.internal trusty-security/universe Translation-en [14 B] Get:27 http://ftpmaster.internal trusty-updates/main amd64 Packages [14 B] Get:28 http://ftpmaster.internal trusty-updates/restricted amd64 Packages [14 B] Get:29 http://ftpmaster.internal trusty-updates/universe amd64 Packages [14 B] Get:30 http://ftpmaster.internal trusty-updates/multiverse amd64 Packages [14 B] Get:31 http://ftpmaster.internal trusty-updates/main Translation-en [14 B] Get:32 http://ftpmaster.internal trusty-updates/multiverse Translation-en [14 B] Get:33 http://ftpmaster.internal trusty-updates/restricted Translation-en [14 B] Get:34 http://ftpmaster.internal trusty-updates/universe Translation-en [14 B] Get:35 http://ftpmaster.internal trusty-proposed/main amd64 Packages [87.8 kB] Get:36 http://ftpmaster.internal trusty-proposed/restricted amd64 Packages [14 B] Get:37 http://ftpmaster.internal trusty-proposed/universe amd64 Packages [560 kB] Get:38 http://ftpmaster.internal trusty-proposed/multiverse amd64 Packages [2384 B] Get:39 http://ftpmaster.internal trusty-proposed/main Translation-en [51.8 kB] Get:40 http://ftpmaster.internal trusty-proposed/multiverse Translation-en [6994 B] Get:41 http://ftpmaster.internal trusty-proposed/restricted Translation-en [14 B] Get:42 http://ftpmaster.internal trusty-proposed/universe Translation-en [390 kB] Fetched 13.1 MB in 4s (2984 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libdb5.3 libprocps1 The following packages will be upgraded: base-files base-passwd binutils busybox-initramfs bzip2 cpp-4.8 diffutils g++-4.8 gcc-4.8 gcc-4.8-base grep ifupdown iproute iproute2 libasan0 libatomic1 libbz2-1.0 libcloog-isl4 libdrm2 libgcc-4.8-dev libgcc1 libgomp1 libisl10 libitm1 libjson-c2 libjson0 libkeyutils1 libldap-2.4-2 libmpfr4 libpam-modules libpam-modules-bin libpam-runtime libpam0g libprocps0 libquadmath0 libselinux1 libsemanage-common libsemanage1 libsqlite3-0 libstdc++-4.8-dev libstdc++6 libtsan0 libudev1 perl perl-base perl-modules procps sed tar udev 50 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 46.1 MB of archives. After this operation, 4449 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files diffutils grep perl perl-base perl-modules bzip2 libbz2-1.0 sed tar base-passwd libitm1 libgomp1 gcc-4.8-base libstdc++6 libasan0 libatomic1 libtsan0 libquadmath0 cpp-4.8 binutils libstdc++-4.8-dev g++-4.8 gcc-4.8 libgcc-4.8-dev libgcc1 libcloog-isl4 libisl10 libmpfr4 libdb5.3 libpam0g libselinux1 libpam-modules-bin libpam-modules libsemanage-common libsemanage1 libsqlite3-0 libdrm2 libjson-c2 libprocps1 udev libudev1 libkeyutils1 libldap-2.4-2 libprocps0 libpam-runtime busybox-initramfs iproute2 ifupdown libjson0 procps iproute Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main base-files amd64 6.12ubuntu5 [61.8 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main diffutils amd64 1:3.3-1 [206 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main grep amd64 2.14-4 [298 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty-proposed/main perl amd64 5.18.1-4 [4469 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty-proposed/main perl-base amd64 5.18.1-4 [1582 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty-proposed/main perl-modules all 5.18.1-4 [3926 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main bzip2 amd64 1.0.6-5 [38.8 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main libbz2-1.0 amd64 1.0.6-5 [33.9 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main sed amd64 4.2.2-2ubuntu1 [143 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty-proposed/main tar amd64 1.27-1 [234 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main base-passwd amd64 3.5.28 [39.5 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libitm1 amd64 4.8.2-1ubuntu2 [37.4 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main libgomp1 amd64 4.8.2-1ubuntu2 [27.0 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8-base amd64 4.8.2-1ubuntu2 [16.0 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++6 amd64 4.8.2-1ubuntu2 [326 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libasan0 amd64 4.8.2-1ubuntu2 [75.8 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libatomic1 amd64 4.8.2-1ubuntu2 [10.3 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main libtsan0 amd64 4.8.2-1ubuntu2 [118 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main libquadmath0 amd64 4.8.2-1ubuntu2 [139 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main cpp-4.8 amd64 4.8.2-1ubuntu2 [5838 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main binutils amd64 2.23.90.20131017-1ubuntu1 [3590 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libstdc++-4.8-dev amd64 4.8.2-1ubuntu2 [1754 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main g++-4.8 amd64 4.8.2-1ubuntu2 [8702 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main gcc-4.8 amd64 4.8.2-1ubuntu2 [6642 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main libgcc-4.8-dev amd64 4.8.2-1ubuntu2 [2791 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main libgcc1 amd64 1:4.8.2-1ubuntu2 [43.4 kB] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main libcloog-isl4 amd64 0.18.1-1 [67.8 kB] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main libisl10 amd64 0.12.1-1 [524 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main libmpfr4 amd64 3.1.2-1 [203 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main libdb5.3 amd64 5.3.21-2 [786 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main libpam0g amd64 1.1.3-10ubuntu1 [62.2 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main libselinux1 amd64 2.1.13-3 [67.2 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules-bin amd64 1.1.3-10ubuntu1 [48.0 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main libpam-modules amd64 1.1.3-10ubuntu1 [284 kB] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main libsemanage-common all 2.1.10-3 [6586 B] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main libsemanage1 amd64 2.1.10-3 [84.0 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libsqlite3-0 amd64 3.8.0.2-1ubuntu1 [385 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main libdrm2 amd64 2.4.46-3 [26.5 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main libjson-c2 amd64 0.11-3ubuntu1 [23.8 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main libprocps1 amd64 1:3.3.8-2ubuntu1 [36.1 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main udev amd64 204-0ubuntu19 [1038 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main libudev1 amd64 204-0ubuntu19 [35.8 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main libkeyutils1 amd64 1.5.6-1 [7318 B] Get:44 http://ftpmaster.internal/ubuntu/ trusty-proposed/main libldap-2.4-2 amd64 2.4.31-1+nmu2ubuntu4 [186 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main libprocps0 amd64 1:3.3.3-2ubuntu8 [35.9 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/main libpam-runtime all 1.1.3-10ubuntu1 [40.9 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main busybox-initramfs amd64 1:1.20.0-9ubuntu2 [202 kB] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main iproute2 amd64 3.11.0-1 [532 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main ifupdown amd64 0.7.45ubuntu1 [58.7 kB] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main libjson0 amd64 0.11-3ubuntu1 [1018 B] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main procps amd64 1:3.3.8-2ubuntu1 [250 kB] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main iproute all 1:3.11.0-1 [2324 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 46.1 MB in 3s (13.9 MB/s) (Reading database ... 12079 files and directories currently installed.) Preparing to replace base-files 6.12ubuntu4 (using .../base-files_6.12ubuntu5_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.12ubuntu5) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/os-release ... (Reading database ... 12079 files and directories currently installed.) Preparing to replace diffutils 1:3.2-8 (using .../diffutils_1%3a3.3-1_amd64.deb) ... Unpacking replacement diffutils ... Setting up diffutils (1:3.3-1) ... (Reading database ... 12079 files and directories currently installed.) Preparing to replace grep 2.14-3 (using .../archives/grep_2.14-4_amd64.deb) ... Unpacking replacement grep ... Setting up grep (2.14-4) ... (Reading database ... 12079 files and directories currently installed.) Preparing to replace perl 5.14.2-21build1 (using .../perl_5.18.1-4_amd64.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-21build1 (using .../perl-base_5.18.1-4_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.18.1-4) ... (Reading database ... 11981 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-21build1 (using .../perl-modules_5.18.1-4_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace bzip2 1.0.6-4 (using .../bzip2_1.0.6-5_amd64.deb) ... Unpacking replacement bzip2 ... Preparing to replace libbz2-1.0:amd64 1.0.6-4 (using .../libbz2-1.0_1.0.6-5_amd64.deb) ... Unpacking replacement libbz2-1.0:amd64 ... Setting up libbz2-1.0:amd64 (1.0.6-5) ... Processing triggers for libc-bin ... (Reading database ... 12018 files and directories currently installed.) Preparing to replace sed 4.2.2-1ubuntu1 (using .../sed_4.2.2-2ubuntu1_amd64.deb) ... Unpacking replacement sed ... Setting up sed (4.2.2-2ubuntu1) ... (Reading database ... 12018 files and directories currently installed.) Preparing to replace tar 1.26+dfsg-8 (using .../archives/tar_1.27-1_amd64.deb) ... Unpacking replacement tar ... Setting up tar (1.27-1) ... (Reading database ... 12019 files and directories currently installed.) Preparing to replace base-passwd 3.5.26 (using .../base-passwd_3.5.28_amd64.deb) ... Unpacking replacement base-passwd ... Setting up base-passwd (3.5.28) ... (Reading database ... 12019 files and directories currently installed.) Preparing to replace libitm1:amd64 4.8.1-10ubuntu8 (using .../libitm1_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libitm1:amd64 ... Preparing to replace libgomp1:amd64 4.8.1-10ubuntu8 (using .../libgomp1_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libgomp1:amd64 ... Preparing to replace gcc-4.8-base:amd64 4.8.1-10ubuntu8 (using .../gcc-4.8-base_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement gcc-4.8-base:amd64 ... Setting up gcc-4.8-base:amd64 (4.8.2-1ubuntu2) ... (Reading database ... 12019 files and directories currently installed.) Preparing to replace libstdc++6:amd64 4.8.1-10ubuntu8 (using .../libstdc++6_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libstdc++6:amd64 ... Preparing to replace libgcc1:amd64 1:4.8.1-10ubuntu8 (using .../libgcc1_1%3a4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libgcc1:amd64 ... Setting up libgcc1:amd64 (1:4.8.2-1ubuntu2) ... Setting up libstdc++6:amd64 (4.8.2-1ubuntu2) ... Processing triggers for libc-bin ... (Reading database ... 12019 files and directories currently installed.) Preparing to replace libasan0:amd64 4.8.1-10ubuntu8 (using .../libasan0_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libasan0:amd64 ... Preparing to replace libatomic1:amd64 4.8.1-10ubuntu8 (using .../libatomic1_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libatomic1:amd64 ... Preparing to replace libtsan0:amd64 4.8.1-10ubuntu8 (using .../libtsan0_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libtsan0:amd64 ... Preparing to replace libquadmath0:amd64 4.8.1-10ubuntu8 (using .../libquadmath0_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libquadmath0:amd64 ... Preparing to replace cpp-4.8 4.8.1-10ubuntu8 (using .../cpp-4.8_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement cpp-4.8 ... Preparing to replace binutils 2.23.52.20130913-0ubuntu1 (using .../binutils_2.23.90.20131017-1ubuntu1_amd64.deb) ... Unpacking replacement binutils ... Preparing to replace libstdc++-4.8-dev:amd64 4.8.1-10ubuntu8 (using .../libstdc++-4.8-dev_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libstdc++-4.8-dev:amd64 ... Preparing to replace g++-4.8 4.8.1-10ubuntu8 (using .../g++-4.8_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement g++-4.8 ... Preparing to replace gcc-4.8 4.8.1-10ubuntu8 (using .../gcc-4.8_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement gcc-4.8 ... Preparing to replace libgcc-4.8-dev:amd64 4.8.1-10ubuntu8 (using .../libgcc-4.8-dev_4.8.2-1ubuntu2_amd64.deb) ... Unpacking replacement libgcc-4.8-dev:amd64 ... Preparing to replace libcloog-isl4:amd64 0.18.0-2 (using .../libcloog-isl4_0.18.1-1_amd64.deb) ... Unpacking replacement libcloog-isl4:amd64 ... Preparing to replace libisl10:amd64 0.11.2-1 (using .../libisl10_0.12.1-1_amd64.deb) ... Unpacking replacement libisl10:amd64 ... Preparing to replace libmpfr4:amd64 3.1.1-2 (using .../libmpfr4_3.1.2-1_amd64.deb) ... Unpacking replacement libmpfr4:amd64 ... Selecting previously unselected package libdb5.3:amd64. Unpacking libdb5.3:amd64 (from .../libdb5.3_5.3.21-2_amd64.deb) ... Setting up libdb5.3:amd64 (5.3.21-2) ... Processing triggers for libc-bin ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libpam0g:amd64 1.1.3-8ubuntu3 (using .../libpam0g_1.1.3-10ubuntu1_amd64.deb) ... Unpacking replacement libpam0g:amd64 ... Setting up libpam0g:amd64 (1.1.3-10ubuntu1) ... Processing triggers for libc-bin ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libselinux1:amd64 2.1.13-2 (using .../libselinux1_2.1.13-3_amd64.deb) ... Unpacking replacement libselinux1:amd64 ... Setting up libselinux1:amd64 (2.1.13-3) ... Processing triggers for libc-bin ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libpam-modules-bin 1.1.3-8ubuntu3 (using .../libpam-modules-bin_1.1.3-10ubuntu1_amd64.deb) ... Unpacking replacement libpam-modules-bin ... Setting up libpam-modules-bin (1.1.3-10ubuntu1) ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libpam-modules:amd64 1.1.3-8ubuntu3 (using .../libpam-modules_1.1.3-10ubuntu1_amd64.deb) ... Unpacking replacement libpam-modules:amd64 ... Setting up libpam-modules:amd64 (1.1.3-10ubuntu1) ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libsemanage-common 2.1.10-2 (using .../libsemanage-common_2.1.10-3_all.deb) ... Unpacking replacement libsemanage-common ... Setting up libsemanage-common (2.1.10-3) ... Installing new version of config file /etc/selinux/semanage.conf ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libsemanage1:amd64 2.1.10-2 (using .../libsemanage1_2.1.10-3_amd64.deb) ... Unpacking replacement libsemanage1:amd64 ... Setting up libsemanage1:amd64 (2.1.10-3) ... Processing triggers for libc-bin ... (Reading database ... 12025 files and directories currently installed.) Preparing to replace libsqlite3-0:amd64 3.7.17-1ubuntu1 (using .../libsqlite3-0_3.8.0.2-1ubuntu1_amd64.deb) ... Unpacking replacement libsqlite3-0:amd64 ... Preparing to replace libdrm2:amd64 2.4.46-1 (using .../libdrm2_2.4.46-3_amd64.deb) ... Unpacking replacement libdrm2:amd64 ... Preparing to replace libjson-c2:amd64 0.11-2ubuntu1 (using .../libjson-c2_0.11-3ubuntu1_amd64.deb) ... Unpacking replacement libjson-c2:amd64 ... Selecting previously unselected package libprocps1:amd64. Unpacking libprocps1:amd64 (from .../libprocps1_1%3a3.3.8-2ubuntu1_amd64.deb) ... Preparing to replace udev 204-0ubuntu18 (using .../udev_204-0ubuntu19_amd64.deb) ... Adding 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' Unpacking replacement udev ... Preparing to replace libudev1:amd64 204-0ubuntu18 (using .../libudev1_204-0ubuntu19_amd64.deb) ... Unpacking replacement libudev1:amd64 ... Preparing to replace libkeyutils1:amd64 1.5.5-7 (using .../libkeyutils1_1.5.6-1_amd64.deb) ... Unpacking replacement libkeyutils1:amd64 ... Preparing to replace libldap-2.4-2:amd64 2.4.31-1+nmu2ubuntu3 (using .../libldap-2.4-2_2.4.31-1+nmu2ubuntu4_amd64.deb) ... Unpacking replacement libldap-2.4-2:amd64 ... Preparing to replace libprocps0:amd64 1:3.3.3-2ubuntu7 (using .../libprocps0_1%3a3.3.3-2ubuntu8_amd64.deb) ... Unpacking replacement libprocps0:amd64 ... Preparing to replace libpam-runtime 1.1.3-8ubuntu3 (using .../libpam-runtime_1.1.3-10ubuntu1_all.deb) ... Unpacking replacement libpam-runtime ... Setting up libpam-runtime (1.1.3-10ubuntu1) ... (Reading database ... 12032 files and directories currently installed.) Preparing to replace busybox-initramfs 1:1.20.0-8.1ubuntu1 (using .../busybox-initramfs_1%3a1.20.0-9ubuntu2_amd64.deb) ... Unpacking replacement busybox-initramfs ... Preparing to replace iproute2 3.10.0-1ubuntu1 (using .../iproute2_3.11.0-1_amd64.deb) ... Unpacking replacement iproute2 ... Preparing to replace ifupdown 0.7.44ubuntu3 (using .../ifupdown_0.7.45ubuntu1_amd64.deb) ... Unpacking replacement ifupdown ... Preparing to replace libjson0:amd64 0.11-2ubuntu1 (using .../libjson0_0.11-3ubuntu1_amd64.deb) ... Unpacking replacement libjson0:amd64 ... Preparing to replace procps 1:3.3.3-2ubuntu7 (using .../procps_1%3a3.3.8-2ubuntu1_amd64.deb) ... invoke-rc.d: policy-rc.d denied execution of stop. Unpacking replacement procps ... Preparing to replace iproute 1:3.10.0-1ubuntu1 (using .../iproute_1%3a3.11.0-1_all.deb) ... Unpacking replacement iproute ... Setting up bzip2 (1.0.6-5) ... Setting up libitm1:amd64 (4.8.2-1ubuntu2) ... Setting up libgomp1:amd64 (4.8.2-1ubuntu2) ... Setting up libasan0:amd64 (4.8.2-1ubuntu2) ... Setting up libatomic1:amd64 (4.8.2-1ubuntu2) ... Setting up libtsan0:amd64 (4.8.2-1ubuntu2) ... Setting up libquadmath0:amd64 (4.8.2-1ubuntu2) ... Setting up libisl10:amd64 (0.12.1-1) ... Setting up libcloog-isl4:amd64 (0.18.1-1) ... Setting up libmpfr4:amd64 (3.1.2-1) ... Setting up cpp-4.8 (4.8.2-1ubuntu2) ... Setting up binutils (2.23.90.20131017-1ubuntu1) ... Setting up libgcc-4.8-dev:amd64 (4.8.2-1ubuntu2) ... Setting up libstdc++-4.8-dev:amd64 (4.8.2-1ubuntu2) ... Setting up gcc-4.8 (4.8.2-1ubuntu2) ... Setting up g++-4.8 (4.8.2-1ubuntu2) ... Setting up libsqlite3-0:amd64 (3.8.0.2-1ubuntu1) ... Setting up libdrm2:amd64 (2.4.46-3) ... Setting up libjson-c2:amd64 (0.11-3ubuntu1) ... Setting up libprocps1:amd64 (1:3.3.8-2ubuntu1) ... Setting up libudev1:amd64 (204-0ubuntu19) ... Setting up udev (204-0ubuntu19) ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up libkeyutils1:amd64 (1.5.6-1) ... Setting up libldap-2.4-2:amd64 (2.4.31-1+nmu2ubuntu4) ... Setting up libprocps0:amd64 (1:3.3.3-2ubuntu8) ... Setting up busybox-initramfs (1:1.20.0-9ubuntu2) ... Setting up iproute2 (3.11.0-1) ... Setting up ifupdown (0.7.45ubuntu1) ... Setting up libjson0:amd64 (0.11-3ubuntu1) ... Setting up procps (1:3.3.8-2ubuntu1) ... Installing new version of config file /etc/sysctl.conf ... Installing new version of config file /etc/init.d/procps ... invoke-rc.d: policy-rc.d denied execution of start. Setting up iproute (1:3.11.0-1) ... Setting up perl-modules (5.18.1-4) ... Setting up perl (5.18.1-4) ... Processing triggers for libc-bin ... Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-5140644', 'amd64', 'trusty-proposed', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty-proposed', '--purpose=PRIMARY', '--architecture=amd64', '--comp=multiverse', 'mgltools-sff_1.5.7~rc1~cvs.20130519-2.dsc'] Initiating build PACKAGEBUILD-5140644 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.2.0-37-generic #58-Ubuntu SMP Thu Jan 24 15:28:10 UTC 2013 x86_64 Automatic build of mgltools-sff_1.5.7~rc1~cvs.20130519-2 on allspice by sbuild/amd64 1.170.5 Build started at 20131023-0701 ****************************************************************************** mgltools-sff_1.5.7~rc1~cvs.20130519-2.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8), python-all-dev (>= 2.6), swig (>= 1.3.20), python-numpy, mgltools-bhtree Checking for already installed source dependencies... debhelper: missing python-all-dev: missing swig: missing python-numpy: missing mgltools-bhtree: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper python-all-dev swig python-numpy mgltools-bhtree Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libprocps0 Use 'apt-get autoremove' to remove it. The following extra packages will be installed: apparmor-easyprof bsdmainutils dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libblas3 libcroco3 libexpat1 libexpat1-dev libffi6 libgfortran3 libglib2.0-0 liblapack3 libmagic1 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libunistring0 libxml2 man-db mime-support po-debconf python python-all python-dev python-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal swig2.0 Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser libmail-box-perl python-doc python-tk python-numpy-doc python-numpy-dbg python-nose gfortran python2.7-doc binfmt-support python3-doc python3-tk python3.3-doc swig-doc swig-examples swig2.0-examples swig2.0-doc Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl The following NEW packages will be installed: apparmor-easyprof bsdmainutils debhelper dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libblas3 libcroco3 libexpat1 libexpat1-dev libffi6 libgfortran3 libglib2.0-0 liblapack3 libmagic1 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libunistring0 libxml2 man-db mgltools-bhtree mime-support po-debconf python python-all python-all-dev python-dev python-minimal python-numpy python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal swig swig2.0 0 upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 48.1 MB of archives. After this operation, 115 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libffi6 libmagic1 libpython3.3-minimal mime-support libpython3.3-stdlib python3.3-minimal libasprintf0c2 libglib2.0-0 libpipeline1 libxml2 groff-base bsdmainutils man-db libcroco3 libgfortran3 libpython2.7-minimal libpython2.7-stdlib libpython2.7 libexpat1-dev libpython2.7-dev libunistring0 python2.7-minimal python3.3 python3-minimal libpython3-stdlib python3 dh-python file gettext-base gettext intltool-debian po-debconf apparmor-easyprof dh-apparmor debhelper libblas3 liblapack3 libpython-dev libpython-all-dev libpython-stdlib python2.7 python-minimal python python-numpy mgltools-bhtree python-all python2.7-dev python-dev python-all-dev swig2.0 swig Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1 amd64 2.1.0-4 [129 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libffi6 amd64 3.0.13-4 [19.4 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libmagic1 amd64 5.11-2ubuntu4 [170 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-minimal amd64 3.3.2-7ubuntu3 [619 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [31.7 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-stdlib amd64 3.3.2-7ubuntu3 [2687 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main python3.3-minimal amd64 3.3.2-7ubuntu3 [1750 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main libasprintf0c2 amd64 0.18.3.1-1ubuntu1 [7244 B] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libglib2.0-0 amd64 2.38.1-1 [1015 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libpipeline1 amd64 1.2.4-1 [27.2 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libxml2 amd64 2.9.1+dfsg1-3ubuntu2 [693 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main groff-base amd64 1.22.2-3 [719 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main bsdmainutils amd64 9.0.5ubuntu1 [203 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main man-db amd64 2.6.5-2 [710 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libcroco3 amd64 0.6.8-2 [82.6 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libgfortran3 amd64 4.8.2-1ubuntu2 [347 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-minimal amd64 2.7.5-8ubuntu3 [504 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-stdlib amd64 2.7.5-8ubuntu3 [2487 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7 amd64 2.7.5-8ubuntu3 [1353 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1-dev amd64 2.1.0-4 [212 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-dev amd64 2.7.5-8ubuntu3 [23.5 MB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libunistring0 amd64 0.9.3-5ubuntu1 [430 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-minimal amd64 2.7.5-8ubuntu3 [1512 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main python3.3 amd64 3.3.2-7ubuntu3 [129 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main python3-minimal amd64 3.3.2-14ubuntu1 [26.6 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main libpython3-stdlib amd64 3.3.2-14ubuntu1 [8146 B] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main python3 amd64 3.3.2-14ubuntu1 [9166 B] Get:28 http://ftpmaster.internal/ubuntu/ trusty-proposed/main dh-python all 1.20131021-1 [62.1 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main file amd64 5.11-2ubuntu4 [18.4 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main gettext-base amd64 0.18.3.1-1ubuntu1 [78.9 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main gettext amd64 0.18.3.1-1ubuntu1 [1033 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty-proposed/main apparmor-easyprof all 2.8.0-0ubuntu32 [23.3 kB] Get:35 http://ftpmaster.internal/ubuntu/ trusty-proposed/main dh-apparmor all 2.8.0-0ubuntu32 [7830 B] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main debhelper all 9.20130921ubuntu1 [635 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main libblas3 amd64 1.2.20110419-7 [215 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main liblapack3 amd64 3.4.2+dfsg-4 [2506 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main libpython-dev amd64 2.7.5-5ubuntu1 [7846 B] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main libpython-all-dev amd64 2.7.5-5ubuntu1 [946 B] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main libpython-stdlib amd64 2.7.5-5ubuntu1 [7768 B] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main python2.7 amd64 2.7.5-8ubuntu3 [192 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main python-minimal amd64 2.7.5-5ubuntu1 [31.4 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main python amd64 2.7.5-5ubuntu1 [171 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main python-numpy amd64 1:1.7.1-1ubuntu1 [2012 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/multiverse mgltools-bhtree amd64 1.5.7~rc1~cvs.20130519-1 [66.4 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main python-all amd64 2.7.5-5ubuntu1 [934 B] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-dev amd64 2.7.5-8ubuntu3 [288 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main python-dev amd64 2.7.5-5ubuntu1 [1128 B] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main python-all-dev amd64 2.7.5-5ubuntu1 [950 B] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main swig2.0 amd64 2.0.10-0ubuntu2 [1153 kB] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main swig amd64 2.0.10-0ubuntu2 [6670 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 48.1 MB in 3s (15.5 MB/s) Selecting previously unselected package libexpat1:amd64. (Reading database ... 12033 files and directories currently installed.) Unpacking libexpat1:amd64 (from .../libexpat1_2.1.0-4_amd64.deb) ... Selecting previously unselected package libffi6:amd64. Unpacking libffi6:amd64 (from .../libffi6_3.0.13-4_amd64.deb) ... Selecting previously unselected package libmagic1:amd64. Unpacking libmagic1:amd64 (from .../libmagic1_5.11-2ubuntu4_amd64.deb) ... Selecting previously unselected package libpython3.3-minimal:amd64. Unpacking libpython3.3-minimal:amd64 (from .../libpython3.3-minimal_3.3.2-7ubuntu3_amd64.deb) ... Selecting previously unselected package mime-support. Unpacking mime-support (from .../mime-support_3.54ubuntu1_all.deb) ... Selecting previously unselected package libpython3.3-stdlib:amd64. Unpacking libpython3.3-stdlib:amd64 (from .../libpython3.3-stdlib_3.3.2-7ubuntu3_amd64.deb) ... Selecting previously unselected package python3.3-minimal. Unpacking python3.3-minimal (from .../python3.3-minimal_3.3.2-7ubuntu3_amd64.deb) ... 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Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libcroco3:amd64 (0.6.8-2) ... Setting up libgfortran3:amd64 (4.8.2-1ubuntu2) ... Setting up libpython2.7-minimal:amd64 (2.7.5-8ubuntu3) ... Setting up libpython2.7-stdlib:amd64 (2.7.5-8ubuntu3) ... Setting up libpython2.7:amd64 (2.7.5-8ubuntu3) ... Setting up libexpat1-dev:amd64 (2.1.0-4) ... Setting up libpython2.7-dev:amd64 (2.7.5-8ubuntu3) ... Setting up libunistring0:amd64 (0.9.3-5ubuntu1) ... Setting up python2.7-minimal (2.7.5-8ubuntu3) ... Linking and byte-compiling packages for runtime python2.7... Setting up python3.3 (3.3.2-7ubuntu3) ... Setting up python3-minimal (3.3.2-14ubuntu1) ... Setting up libpython3-stdlib:amd64 (3.3.2-14ubuntu1) ... Setting up file (5.11-2ubuntu4) ... Setting up gettext-base (0.18.3.1-1ubuntu1) ... Setting up gettext (0.18.3.1-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up libblas3 (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up liblapack3 (3.4.2+dfsg-4) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libpython-dev:amd64 (2.7.5-5ubuntu1) ... Setting up libpython-all-dev:amd64 (2.7.5-5ubuntu1) ... Setting up libpython-stdlib:amd64 (2.7.5-5ubuntu1) ... Setting up python2.7 (2.7.5-8ubuntu3) ... Setting up python-minimal (2.7.5-5ubuntu1) ... Setting up python (2.7.5-5ubuntu1) ... Setting up python-numpy (1:1.7.1-1ubuntu1) ... Setting up mgltools-bhtree (1.5.7~rc1~cvs.20130519-1) ... Setting up python-all (2.7.5-5ubuntu1) ... Setting up python2.7-dev (2.7.5-8ubuntu3) ... Setting up python-dev (2.7.5-5ubuntu1) ... Setting up python-all-dev (2.7.5-5ubuntu1) ... Setting up swig2.0 (2.0.10-0ubuntu2) ... Setting up swig (2.0.10-0ubuntu2) ... Setting up python3 (3.3.2-14ubuntu1) ... running python rtupdate hooks for python3.3... running python post-rtupdate hooks for python3.3... Setting up dh-python (1.20131021-1) ... Setting up apparmor-easyprof (2.8.0-0ubuntu32) ... Setting up dh-apparmor (2.8.0-0ubuntu32) ... Setting up debhelper (9.20130921ubuntu1) ... Processing triggers for libc-bin ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.17-93ubuntu4 make_3.81-8.2ubuntu3 dpkg-dev_1.16.12ubuntu1 gcc-4.8_4.8.2-1ubuntu2 g++-4.8_4.8.2-1ubuntu2 binutils_2.23.90.20131017-1ubuntu1 libstdc++-4.8-dev_4.8.2-1ubuntu2 libstdc++6_4.8.2-1ubuntu2 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Sat Aug 3 15:08:07 2013 UTC using DSA key ID 54B99890 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./mgltools-sff_1.5.7~rc1~cvs.20130519-2.dsc dpkg-source: info: extracting mgltools-sff in mgltools-sff-1.5.7~rc1~cvs.20130519 dpkg-source: info: unpacking mgltools-sff_1.5.7~rc1~cvs.20130519.orig.tar.gz dpkg-source: info: unpacking mgltools-sff_1.5.7~rc1~cvs.20130519-2.debian.tar.gz dpkg-buildpackage: source package mgltools-sff dpkg-buildpackage: source version 1.5.7~rc1~cvs.20130519-2 dpkg-source --before-build mgltools-sff-1.5.7~rc1~cvs.20130519 dpkg-buildpackage: host architecture amd64 /usr/bin/fakeroot debian/rules clean dh clean --with python2 dh_testdir dh_auto_clean running clean 'build/lib.linux-x86_64-2.7' does not exist -- can't clean it 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it debian/rules override_dh_clean make[1]: Entering directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' dh_clean find . -name CVS -a -type d| xargs -r rm -r rm -rf build build-stamp debian/Pmv make[1]: Leaving directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' debian/rules build-arch dh build-arch --with python2 dh_testdir -a dh_auto_configure -a dh_auto_build -a running build running build_py creating build creating build/lib.linux-x86_64-2.7 creating build/lib.linux-x86_64-2.7/sff copying sff/__init__.py -> build/lib.linux-x86_64-2.7/sff copying sff/__init__.py -> build/lib.linux-x86_64-2.7/sff copying sff/amber.py -> build/lib.linux-x86_64-2.7/sff creating build/lib.linux-x86_64-2.7/sff/Tests copying sff/Tests/p1H_crd.py -> build/lib.linux-x86_64-2.7/sff/Tests copying sff/Tests/test_dependencies.py -> build/lib.linux-x86_64-2.7/sff/Tests copying sff/Tests/__init__.py -> build/lib.linux-x86_64-2.7/sff/Tests copying sff/Tests/test.py -> build/lib.linux-x86_64-2.7/sff/Tests copying sff/Tests/tripepparmdict.py -> build/lib.linux-x86_64-2.7/sff/Tests running build_ext building '_prmlib' extension swigging sff/prmlib.i to sff/prmlib_wrap.c swig -python -o sff/prmlib_wrap.c sff/prmlib.i creating build/temp.linux-x86_64-2.7 creating build/temp.linux-x86_64-2.7/src creating build/temp.linux-x86_64-2.7/sff x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/bhtree.c -o build/temp.linux-x86_64-2.7/src/bhtree.o src/bhtree.c: In function 'generateBHtree': src/bhtree.c:65:3: warning: implicit declaration of function 'malloc' [-Wimplicit-function-declaration] r=(BHtree *)malloc(sizeof(BHtree)); ^ src/bhtree.c:65:15: warning: incompatible implicit declaration of built-in function 'malloc' [enabled by default] r=(BHtree *)malloc(sizeof(BHtree)); ^ src/bhtree.c: In function 'freeBHtree': src/bhtree.c:176:5: warning: implicit declaration of function 'free' [-Wimplicit-function-declaration] for (i=0;iroot->n;i++) free(tree->atom[i]); ^ src/bhtree.c:176:35: warning: incompatible implicit declaration of built-in function 'free' [enabled by default] for (i=0;iroot->n;i++) free(tree->atom[i]); ^ src/bhtree.c:180:3: warning: incompatible implicit declaration of built-in function 'free' [enabled by default] free(tree); ^ src/bhtree.c: In function 'freeBHnode': src/bhtree.c:189:5: warning: incompatible implicit declaration of built-in function 'free' [enabled by default] free(node); ^ src/bhtree.c: In function 'divideBHnode': src/bhtree.c:230:24: warning: incompatible implicit declaration of built-in function 'malloc' [enabled by default] node->left=(BHnode *)malloc(sizeof(BHnode)); ^ src/bhtree.c: In function 'findBHcloseAtoms': src/bhtree.c:369:9: warning: unused variable 'n' [-Wunused-variable] int i,n; ^ x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/binpos.c -o build/temp.linux-x86_64-2.7/src/binpos.o In file included from src/binpos.c:2:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ src/binpos.c: In function 'openbinpos': src/binpos.c:15:2: warning: implicit declaration of function 'strcmp' [-Wimplicit-function-declaration] if( strcmp( magic, "fxyz" ) != 0 ){ ^ src/binpos.c: In function 'readbinpos': src/binpos.c:32:2: warning: implicit declaration of function 'strncmp' [-Wimplicit-function-declaration] if( 0 == strncmp( n_atomf,"fxyz",4 ) ) { ^ src/binpos.c:33:8: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread( n_atomf, size, 1, fp ); ^ src/binpos.c:29:11: warning: 'n_atomf' is used uninitialized in this function [-Wuninitialized] if( fread( n_atomf, sizeof( int ), 1, fp ) != 1 ) { ^ x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/memutil.c -o build/temp.linux-x86_64-2.7/src/memutil.o In file included from src/memutil.c:32:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ src/memutil.c:34:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void nrerror( msg ) ^ src/memutil.c:42:8: warning: function declaration isn't a prototype [-Wstrict-prototypes] float *vector( nl, nh ) ^ src/memutil.c:53:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ivector( nl, nh ) ^ src/memutil.c:64:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ipvector( nl, nh ) ^ src/memutil.c:76:9: warning: function declaration isn't a prototype [-Wstrict-prototypes] float **matrix( nrl, nrh, ncl, nch ) ^ src/memutil.c:104:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] int **imatrix( nrl, nrh, ncl, nch ) ^ src/memutil.c:132:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_vector( v, nl, nh ) ^ src/memutil.c:140:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_ivector( v, nl, nh ) ^ src/memutil.c:158:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_imatrix( m, nrl, nrh, ncl, nch ) ^ src/memutil.c:167:8: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL *Rvector( nl, nh ) ^ src/memutil.c:178:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_Rvector( v, nl, nh ) ^ x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/rand2.c -o build/temp.linux-x86_64-2.7/src/rand2.o src/rand2.c:55:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] float rand2( idum ) ^ src/rand2.c:96:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] float gauss( mean, sd, idum) ^ x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/conjgrad.c -o build/temp.linux-x86_64-2.7/src/conjgrad.o In file included from src/conjgrad.c:31:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ In file included from src/conjgrad.c:32:0: src/memutil.h:30:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void nrerror(); ^ src/memutil.h:31:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float *vector(); ^ src/memutil.h:32:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ivector(); ^ src/memutil.h:33:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ipvector(); ^ src/memutil.h:34:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float **matrix(); ^ src/memutil.h:35:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int **imatrix(); ^ src/memutil.h:36:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_vector(); ^ src/memutil.h:37:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_ivector(); ^ src/memutil.h:38:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_matrix(); ^ src/memutil.h:39:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_imatrix(); ^ src/conjgrad.c: In function 'conjgrad': src/conjgrad.c:44:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ( *func )(); ^ src/conjgrad.c:153:43: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (fch < (_REAL)0. || fch == (_REAL)0. && gnew / gmin >= (_REAL)-1.) { ^ src/conjgrad.c:85:22: warning: unused variable 'ivar' [-Wunused-variable] int niter, iobs, ivar, i, nfbeg, iterc, irsdg, igopt; ^ src/conjgrad.c:85:16: warning: unused variable 'iobs' [-Wunused-variable] int niter, iobs, ivar, i, nfbeg, iterc, irsdg, igopt; ^ src/conjgrad.c:84:16: warning: unused variable 'rho' [-Wunused-variable] _REAL fch, rho, sum; ^ src/conjgrad.c:82:23: warning: unused variable 'z' [-Wunused-variable] _REAL step, work, z, finit, ginit, gsqrd, gspln; ^ src/conjgrad.c:81:47: warning: unused variable 'drho' [-Wunused-variable] _REAL calc, gama, beta, fmin, gmin, dfpr, drho, gnew; ^ src/conjgrad.c:81:11: warning: unused variable 'calc' [-Wunused-variable] _REAL calc, gama, beta, fmin, gmin, dfpr, drho, gnew; ^ src/conjgrad.c:243:3: warning: 'iretry' may be used uninitialized in this function [-Wmaybe-uninitialized] ++iretry; ^ src/conjgrad.c:257:30: warning: 'iterrs' may be used uninitialized in this function [-Wmaybe-uninitialized] if (iterrs != 0 && iterc - iterrs < *n && (sum >= 0 ? sum : -sum) < gsqrd * (_REAL).2) { ^ src/conjgrad.c:208:8: warning: 'nfopt' may be used uninitialized in this function [-Wmaybe-uninitialized] if (niter > nfopt) { ^ src/conjgrad.c:220:23: warning: 'nfbeg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (niter > nfbeg + 1) { ^ src/conjgrad.c:206:17: warning: 'fch' may be used uninitialized in this function [-Wmaybe-uninitialized] work = (fch + fch) / stepch - gnew - gmin; ^ src/conjgrad.c:229:22: warning: 'sbound' may be used uninitialized in this function [-Wmaybe-uninitialized] stepch = (sbound - stmin) * (_REAL).5; ^ src/conjgrad.c:206:24: warning: 'stepch' may be used uninitialized in this function [-Wmaybe-uninitialized] work = (fch + fch) / stepch - gnew - gmin; ^ src/conjgrad.c:233:27: warning: 'ddspln' may be used uninitialized in this function [-Wmaybe-uninitialized] gspln = gmin + stepch * ddspln; ^ src/conjgrad.c:265:8: warning: 'gamden' may be used uninitialized in this function [-Wmaybe-uninitialized] gama /= gamden; ^ src/conjgrad.c:229:22: warning: 'stmin' may be used uninitialized in this function [-Wmaybe-uninitialized] stepch = (sbound - stmin) * (_REAL).5; ^ src/conjgrad.c:171:11: warning: 'gsqrd' may be used uninitialized in this function [-Wmaybe-uninitialized] stmin = *dfpred / gsqrd; ^ src/conjgrad.c:221:13: warning: 'ginit' may be used uninitialized in this function [-Wmaybe-uninitialized] if ((r__1 = gmin / ginit, ((r__1) >= 0 ? (r__1) : ^ src/conjgrad.c:250:8: warning: 'finit' may be used uninitialized in this function [-Wmaybe-uninitialized] if (*f < finit) iterfm = iterc; ^ src/conjgrad.c:206:10: warning: 'gmin' may be used uninitialized in this function [-Wmaybe-uninitialized] work = (fch + fch) / stepch - gnew - gmin; ^ src/conjgrad.c:151:7: warning: 'fmin' may be used uninitialized in this function [-Wmaybe-uninitialized] fch = *f - fmin; ^ x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/prm.c -o build/temp.linux-x86_64-2.7/src/prm.o In file included from src/prm.c:25:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ src/prm.c:32:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] extern int errno; ^ src/prm.c:53:1: warning: return type defaults to 'int' [-Wreturn-type] skipeoln(file) ^ src/prm.c:53:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] src/prm.c:75:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] iscompressed(name) ^ src/prm.c:99:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] genopen(name) ^ src/prm.c:173:1: warning: return type defaults to 'int' [-Wreturn-type] genclose(fileptr, popn) ^ src/prm.c:173:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] src/prm.c:191:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] get(size) ^ src/prm.c:216:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] preadln(file, name, string) ^ src/prm.c: In function 'readparm': src/prm.c:330:28: warning: unused variable 'fld' [-Wunused-variable] char buf[132], fld[20]; ^ src/prm.c:326:47: warning: variable 'atype' set but not used [-Wunused-but-set-variable] int i, k, idum, res, ifpert, iat, kat, lat, atype; ^ src/prm.c: At top level: src/prm.c:875:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] firstwat(prm) ^ src/prm.c: In function 'readcrdvec': src/prm.c:961:15: warning: unused variable 'n' [-Wunused-variable] int i, j, n; ^ src/prm.c: In function 'skipeoln': src/prm.c:64:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ src/prm.c: In function 'genclose': src/prm.c:183:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ src/prm.c: In function 'preadln': src/prm.c:236:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ src/prm.c: In function 'readparm': src/prm.c:351:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 80, file); ^ src/prm.c:365:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 80, file); ^ src/prm.c:395:8: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d %d %d", ^ src/prm.c:424:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Charges[i]); ^ src/prm.c:436:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %le", &prm->Masses[i]); ^ src/prm.c:447:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Iac[i]); ^ src/prm.c:455:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Iblo[i]); ^ src/prm.c:463:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Cno[i]); ^ src/prm.c:488:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Ipres[i]); ^ src/prm.c:498:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Rk[i]); ^ src/prm.c:510:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Req[i]); ^ src/prm.c:522:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Tk[i]); ^ src/prm.c:534:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Teq[i]); ^ src/prm.c:546:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Pk[i]); ^ src/prm.c:558:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Pn[i]); ^ src/prm.c:570:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Phase[i]); ^ src/prm.c:582:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Solty[i]); ^ src/prm.c:595:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Cn1[i]); ^ src/prm.c:608:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Cn2[i]); ^ src/prm.c:622:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d", ^ src/prm.c:634:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d", ^ src/prm.c:647:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d", ^ src/prm.c:661:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d", ^ src/prm.c:676:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d %d", ^ src/prm.c:691:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d %d", ^ src/prm.c:701:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->ExclAt[i]); ^ src/prm.c:710:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->HB12[i]); ^ src/prm.c:722:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->HB10[i]); ^ src/prm.c:735:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &H[i]); ^ src/prm.c:762:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->TreeJoin[i]); ^ src/prm.c:772:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->AtomRes[i]); ^ src/prm.c:790:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d", &prm->Iptres, &prm->Nspm, ^ src/prm.c:795:10: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Boundary[i]); ^ src/prm.c:798:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf %lf %lf", ^ src/prm.c:817:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %lf %lf %lf %lf", ^ x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/sff.c -o build/temp.linux-x86_64-2.7/src/sff.o In file included from src/sff.c:43:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ In file included from src/sff.c:44:0: src/memutil.h:30:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void nrerror(); ^ src/memutil.h:31:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float *vector(); ^ src/memutil.h:32:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ivector(); ^ src/memutil.h:33:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ipvector(); ^ src/memutil.h:34:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float **matrix(); ^ src/memutil.h:35:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int **imatrix(); ^ src/memutil.h:36:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_vector(); ^ src/memutil.h:37:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_ivector(); ^ src/memutil.h:38:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_matrix(); ^ src/memutil.h:39:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_imatrix(); ^ src/sff.c:76:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL second() ^ src/sff.c:88:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float gauss(); /* never double -bsd- */ ^ src/sff.c: In function 'mm_options': src/sff.c:207:11: warning: 'return' with no value, in function returning non-void [-Wreturn-type] if (!c) return; ^ src/sff.c: In function 'md_options': src/sff.c:246:11: warning: 'return' with no value, in function returning non-void [-Wreturn-type] if (!c) return; ^ src/sff.c: At top level: src/sff.c:289:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks() ^ src/sff.c: In function 'mme_init': src/sff.c:311:9: warning: unused variable 'rrad' [-Wunused-variable] _REAL rrad; ^ src/sff.c:310:18: warning: unused variable 'ip2' [-Wunused-variable] int i, j, ip1, ip2, nblimit; ^ src/sff.c:310:13: warning: unused variable 'ip1' [-Wunused-variable] int i, j, ip1, ip2, nblimit; ^ src/sff.c:310:10: warning: unused variable 'j' [-Wunused-variable] int i, j, ip1, ip2, nblimit; ^ src/sff.c: At top level: src/sff.c:417:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL econs( x, f, prm, opts ) ^ src/sff.c:440:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ebond( nbond, a1, a2, atype, Rk, Req, x, f ) ^ src/sff.c:471:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL eangl( nang, a1, a2, a3, atype, Tk, Teq, x, f ) ^ src/sff.c:542:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ephiRes( nphi, a1, a2, a3, a4, atype, Pk, Pn, Phase, x, start, end ) ^ src/sff.c: In function 'ephiRes': src/sff.c:550:44: warning: unused variable 'e3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:41: warning: unused variable 'e2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:38: warning: unused variable 'e1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:35: warning: unused variable 'd3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:32: warning: unused variable 'd2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:29: warning: unused variable 'd1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:8: warning: unused variable 'df' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:549:63: warning: variable 'dd4z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:58: warning: variable 'dd3z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:53: warning: variable 'dd2z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:48: warning: variable 'dd1z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:43: warning: variable 'dd4y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:38: warning: variable 'dd3y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:33: warning: variable 'dd2y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:28: warning: variable 'dd1y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:23: warning: variable 'dd4x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:18: warning: variable 'dd3x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:13: warning: variable 'dd2x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:8: warning: variable 'dd1x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c: At top level: src/sff.c:661:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ephi( nphi, a1, a2, a3, a4, atype, Pk, Pn, Phase, x, f ) ^ src/sff.c: In function 'ephi': src/sff.c:672:15: warning: unused variable 'in4' [-Wunused-variable] int rat, in1,in4; ^ src/sff.c:672:11: warning: unused variable 'in1' [-Wunused-variable] int rat, in1,in4; ^ src/sff.c:672:6: warning: unused variable 'rat' [-Wunused-variable] int rat, in1,in4; ^ src/sff.c:669:44: warning: unused variable 'e3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:41: warning: unused variable 'e2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:38: warning: unused variable 'e1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:35: warning: unused variable 'd3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:32: warning: unused variable 'd2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:29: warning: unused variable 'd1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c: At top level: src/sff.c:815:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nblist( x, npairs, pairlist, prm, cut, maxnb, frozen ) ^ src/sff.c: In function 'nblist': src/sff.c:828:9: warning: unused variable 'npairlist' [-Wunused-variable] int *npairlist; ^ src/sff.c:825:43: warning: unused variable 'jrescut' [-Wunused-variable] int k,jrp,jrp2,kpr, nbdist=0, irescut, jrescut; ^ src/sff.c:825:34: warning: unused variable 'irescut' [-Wunused-variable] int k,jrp,jrp2,kpr, nbdist=0, irescut, jrescut; ^ src/sff.c: At top level: src/sff.c:940:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nblistBH( x, npairs, pairlist, prm, cut, maxnb, frozen ) ^ src/sff.c: In function 'nblistBH': src/sff.c:951:9: warning: unused variable 'npairlist' [-Wunused-variable] int *npairlist; ^ src/sff.c:947:18: warning: unused variable 'rrw' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c:947:15: warning: unused variable 'dz' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c:947:12: warning: unused variable 'dy' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c:947:9: warning: unused variable 'dx' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c: At top level: src/sff.c:1085:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nbond( npairs, pairlist, x, f, enb, eel, ehb, enbfac, eelfac, prm, dield ) ^ src/sff.c: In function 'nbond': src/sff.c:1095:49: warning: unused variable 'eelt' [-Wunused-variable] _REAL dumx,dumy,dumz,cgi,xw1,xw2,xw3,r2inv,df2,eelt,r6,r10,f1,f2; ^ src/sff.c: In function 'getTor': src/sff.c:1298:19: warning: unused variable 'dum' [-Wunused-variable] _REAL eth, eta, dum; ^ src/sff.c: In function 'mme': src/sff.c:1340:79: warning: variable 'dum' set but not used [-Wunused-but-set-variable] _REAL ebh, eba, eth, eta, eph, epa, enb, ehb, eel, enb14, eel14, ecn, frms, dum; ^ src/sff.c: At top level: src/sff.c:1521:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ebond4( nbond, a1, a2, atype, Rk, Req, x, f ) ^ src/sff.c:1555:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL eangl4( nang, a1, a2, a3, atype, Tk, Teq, x, f ) ^ src/sff.c:1634:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ephi4( nphi, a1, a2, a3, a4, atype, Pk, Pn, Phase, x, f ) ^ src/sff.c: In function 'ephi4': src/sff.c:1643:44: warning: unused variable 'e3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:41: warning: unused variable 'e2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:38: warning: unused variable 'e1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:35: warning: unused variable 'd3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:32: warning: unused variable 'd2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:29: warning: unused variable 'd1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c: At top level: src/sff.c:1794:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nblist4( x, npairs, pairlist, prm, cut, maxnb, frozen ) ^ src/sff.c:1888:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nbond4( npairs, pairlist, x, f, enb, eel, enbfac, eelfac, prm ) ^ src/sff.c: In function 'nbond4': src/sff.c:1898:58: warning: unused variable 'eelt' [-Wunused-variable] _REAL dumx,dumy,dumz,dumw,cgi,xw1,xw2,xw3,xw4,r2inv,df2,eelt,r6,f1,f2; ^ src/sff.c: At top level: src/sff.c:1971:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL mme4( x, f, iter, prm, opts ) ^ src/sff.c: In function 'mme4': src/sff.c:1979:7: warning: variable 'nb_pairs' set but not used [-Wunused-but-set-variable] int nb_pairs; ^ src/sff.c: At top level: src/sff.c:2063:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int get_masses( minv, prm , dim) ^ src/sff.c: In function 'md': src/sff.c:2088:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ( *mme )(); ^ src/sff.c:2097:19: warning: unused variable 'k' [-Wunused-variable] int nstep, i, k; ^ src/sff.c:2096:50: warning: variable 'etot' set but not used [-Wunused-but-set-variable] _REAL dtx, dt5, rndf, dttp, ekin0, ekin, epot, etot, tscal, temp, sd; ^ src/sff.c:2096:14: warning: variable 'dt5' set but not used [-Wunused-but-set-variable] _REAL dtx, dt5, rndf, dttp, ekin0, ekin, epot, etot, tscal, temp, sd; ^ src/sff.c: At top level: src/sff.c:2192:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int mme_timer() ^ src/sff.c: In function 'nbond': src/sff.c:1267:16: warning: 'df2' may be used uninitialized in this function [-Wmaybe-uninitialized] df = (df2+(10.*f2-12.*f1)*enbfaci)*r2inv; ^ x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c sff/prmlib_wrap.c -o build/temp.linux-x86_64-2.7/sff/prmlib_wrap.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:15, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/oldnumeric.h:1, from sff/prmlib_wrap.c:2979: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" ^ In file included from sff/prmlib_wrap.c:2980:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ sff/prmlib_wrap.c: In function 'set_callback': sff/prmlib_wrap.c:3350:9: warning: unused variable 'name' [-Wunused-variable] char *name; ^ sff/prmlib_wrap.c:3349:7: warning: unused variable 'n' [-Wunused-variable] int n, freq=1, which; ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/src/bhtree.o build/temp.linux-x86_64-2.7/src/binpos.o build/temp.linux-x86_64-2.7/src/memutil.o build/temp.linux-x86_64-2.7/src/rand2.o build/temp.linux-x86_64-2.7/src/conjgrad.o build/temp.linux-x86_64-2.7/src/prm.o build/temp.linux-x86_64-2.7/src/sff.o build/temp.linux-x86_64-2.7/sff/prmlib_wrap.o -lm -o build/lib.linux-x86_64-2.7/sff/_prmlib.so dh_auto_test -a /usr/bin/fakeroot debian/rules binary-arch dh binary-arch --with python2 dh_testroot -a dh_prep -a dh_auto_install -a running install running build running build_py running build_ext running install_lib creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7 creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff copying build/lib.linux-x86_64-2.7/sff/__init__.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff copying build/lib.linux-x86_64-2.7/sff/amber.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-x86_64-2.7/sff/Tests/p1H_crd.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-x86_64-2.7/sff/Tests/test_dependencies.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-x86_64-2.7/sff/Tests/__init__.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-x86_64-2.7/sff/Tests/test.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-x86_64-2.7/sff/Tests/tripepparmdict.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-x86_64-2.7/sff/_prmlib.so -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff running install_data copying sff/Tests/p1H.pdb -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying sff/Tests/tripeptide.prm -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests running install_egg_info Writing /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff-1.5.6.egg-info debian/rules override_dh_install make[1]: Entering directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' dh_install dh_numpy make[1]: Leaving directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' dh_installdocs -a dh_installchangelogs -a dh_python2 -a dh_perl -a dh_link -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: all non-arch-all packages for this build platform amd64: mgltools-sff dh_strip debug symbol extraction: packages to act on: mgltools-sff dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package mgltools-sff: unknown substitution variable ${python:Versions} dpkg-deb: building package `mgltools-sff-dbgsym' in `../mgltools-sff-dbgsym_1.5.7~rc1~cvs.20130519-2_amd64.ddeb'. dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 118 pkgstriptranslations: processing mgltools-sff (in debian/mgltools-sff); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mgltools-sff/DEBIAN/control, package mgltools-sff, directory debian/mgltools-sff pkgstripfiles: Truncating usr/share/doc/mgltools-sff/changelog.Debian.gz to topmost ten records pkgstripfiles: PNG optimization for package mgltools-sff took 0 s dpkg-deb: warning: 'debian/mgltools-sff/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: 'debian/mgltools-sff/DEBIAN/control' contains user-defined field 'Python-Version' dpkg-deb: warning: ignoring 2 warnings about the control file(s) dpkg-deb: building package `mgltools-sff' in `../mgltools-sff_1.5.7~rc1~cvs.20130519-2_amd64.deb'. dpkg-genchanges -B -mUbuntu/amd64 Build Daemon >../mgltools-sff_1.5.7~rc1~cvs.20130519-2_amd64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build mgltools-sff-1.5.7~rc1~cvs.20130519 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20131023-0702 Publishing debug debs. chroot-autobuild/build/buildd/mgltools-sff_1.5.7~rc1~cvs.20130519-2_amd64.deb: new debian package, version 2.0. size 96216 bytes: control archive= 1560 bytes. 1206 bytes, 24 lines control 1049 bytes, 14 lines md5sums 162 bytes, 9 lines * postinst #!/bin/sh 261 bytes, 14 lines * prerm #!/bin/sh Package: mgltools-sff Version: 1.5.7~rc1~cvs.20130519-2 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 364 Depends: libc6 (>= 2.14), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python (>= 2.7), python (<< 2.8), python:any (>= 2.7.1-0ubuntu2), mgltools-bhtree Enhances: autodocktools Section: non-free/science Priority: optional Homepage: http://mgltools.scripps.edu/ Description: Simple Force Field for Python This package is part of the mgltools set of Python libraries which provide an infrastructure for the analysis of protein structures and their docking of chemical compounds. . It implements an Amber force field with an interface to a molecular dynamics engine. SFF stands for simple force field. It is a C implementation of the amber force field made by Tom Macke and David Case. . This package exposes a wrapped version of the prm structure which holds the Amber parameters needed for an Amber calculation. It also exposes the mme and md functions to perform molecular mechanics and dynamics respectively. Python-Version: 2.7 chroot-autobuild/build/buildd/mgltools-sff_1.5.7~rc1~cvs.20130519-2_amd64.deb: drwxr-xr-x root/root 0 2013-10-23 07:02 ./ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/lib/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/lib/pyshared/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/lib/pyshared/python2.7/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/lib/pyshared/python2.7/sff/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2013-10-23 07:02 ./usr/lib/python2.7/dist-packages/sff/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/Tests/ -rw-r--r-- root/root 235848 2013-10-23 07:02 ./usr/lib/python2.7/dist-packages/sff/_prmlib.so drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/share/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/share/pyshared/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/share/pyshared/sff/ -rw-r--r-- root/root 144 2006-03-09 22:03 ./usr/share/pyshared/sff/__init__.py -rw-r--r-- root/root 15007 2007-07-30 20:21 ./usr/share/pyshared/sff/amber.py drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/share/pyshared/sff/Tests/ -rw-r--r-- root/root 1055 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/p1H_crd.py -rw-r--r-- root/root 3534 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/p1H.pdb -rw-r--r-- root/root 838 2006-03-15 21:45 ./usr/share/pyshared/sff/Tests/test_dependencies.py -rw-r--r-- root/root 16014 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/tripeptide.prm -rw-r--r-- root/root 1 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/__init__.py -rw-r--r-- root/root 4955 2007-07-30 20:21 ./usr/share/pyshared/sff/Tests/test.py -rw-r--r-- root/root 15331 2004-06-15 17:10 ./usr/share/pyshared/sff/Tests/tripepparmdict.py -rw-r--r-- root/root 336 2013-10-23 07:01 ./usr/share/pyshared/sff-1.5.6.egg-info drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-10-23 07:01 ./usr/share/doc/mgltools-sff/ -rw-r--r-- root/root 1417 2011-04-26 12:14 ./usr/share/doc/mgltools-sff/README.Debian -rw-r--r-- root/root 5989 2013-05-31 17:09 ./usr/share/doc/mgltools-sff/copyright -rw-r--r-- root/root 874 2013-10-23 07:02 ./usr/share/doc/mgltools-sff/changelog.Debian.gz lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/pyshared/python2.7/sff/_prmlib.so -> ../../../python2.7/dist-packages/sff/_prmlib.so lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/__init__.py -> ../../../../share/pyshared/sff/__init__.py lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/amber.py -> ../../../../share/pyshared/sff/amber.py lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/Tests/p1H_crd.py -> ../../../../../share/pyshared/sff/Tests/p1H_crd.py lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/Tests/p1H.pdb -> ../../../../../share/pyshared/sff/Tests/p1H.pdb lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/Tests/test_dependencies.py -> ../../../../../share/pyshared/sff/Tests/test_dependencies.py lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/Tests/tripeptide.prm -> ../../../../../share/pyshared/sff/Tests/tripeptide.prm lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/Tests/__init__.py -> ../../../../../share/pyshared/sff/Tests/__init__.py lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/Tests/test.py -> ../../../../../share/pyshared/sff/Tests/test.py lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff/Tests/tripepparmdict.py -> ../../../../../share/pyshared/sff/Tests/tripepparmdict.py lrwxrwxrwx root/root 0 2013-10-23 07:01 ./usr/lib/python2.7/dist-packages/sff-1.5.6.egg-info -> ../../../share/pyshared/sff-1.5.6.egg-info mgltools-sff_1.5.7~rc1~cvs.20130519-2_amd64.changes: Format: 1.8 Date: Sat, 03 Aug 2013 16:00:00 +0200 Source: mgltools-sff Binary: mgltools-sff Architecture: amd64 Version: 1.5.7~rc1~cvs.20130519-2 Distribution: trusty-proposed Urgency: low Maintainer: Ubuntu/amd64 Build Daemon Changed-By: Thorsten Alteholz Description: mgltools-sff - Simple Force Field for Python Changes: mgltools-sff (1.5.7~rc1~cvs.20130519-2) unstable; urgency=low . * new upload with different debian version (due to missing bhtree) Checksums-Sha1: 14e90c319af9fbf51f28c9214dd35a386b79a915 96216 mgltools-sff_1.5.7~rc1~cvs.20130519-2_amd64.deb Checksums-Sha256: 9af564a0c42780850e0a813d3f2269b2e6a6a514ffe0cd46c0f0603eb470bdde 96216 mgltools-sff_1.5.7~rc1~cvs.20130519-2_amd64.deb Files: 79e551648323386b0cfd0af240a5bfdb 96216 non-free/science optional mgltools-sff_1.5.7~rc1~cvs.20130519-2_amd64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20131023-0702 Build needed 00:00:12, 3500k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-5140644'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-5140644/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-5140644'] Unmounting chroot for build PACKAGEBUILD-5140644... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-5140644'] Removing build PACKAGEBUILD-5140644