mauve-aligner 2.4.0+4734-3 source package in Ubuntu
Changelog
mauve-aligner (2.4.0+4734-3) unstable; urgency=high
* Add explicit dependency on libbiojava-java to enable
functionality of the GUI
* Create a desktop menu to launch the GUI
-- Afif Elghraoui <email address hidden> Sat, 21 Nov 2015 00:30:04 -0800
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Very Urgent
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Bionic | release | universe | misc | |
| Xenial | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| mauve-aligner_2.4.0+4734-3.dsc | 2.2 KiB | bcad65efb8497a857481c900b87411c92fe2f319bd1b36a9872bae0326de67f3 |
| mauve-aligner_2.4.0+4734.orig.tar.xz | 293.8 KiB | f2cf3cf5d33da0dad740b3a3ef24fe8a6a381f28d896b52ea0ef92b179a0d776 |
| mauve-aligner_2.4.0+4734-3.debian.tar.xz | 14.0 KiB | a670500bf18c7368ded6d025661e138ff2aeccbcd080ad344627ad03076898a3 |
Available diffs
- diff from 2.4.0+4734-2 to 2.4.0+4734-3 (1.2 KiB)
No changes file available.
Binary packages built by this source
- mauve-aligner: multiple genome alignment
Mauve is a system for efficiently constructing multiple genome alignments
in the presence of large-scale evolutionary events such as rearrangement
and inversion. Multiple genome alignment provides a basis for research
into comparative genomics and the study of evolutionary dynamics. Aligning
whole genomes is a fundamentally different problem than aligning short
sequences.
.
Mauve has been developed with the idea that a multiple genome aligner
should require only modest computational resources. It employs algorithmic
techniques that scale well in the amount of sequence being aligned. For
example, a pair of Y. pestis genomes can be aligned in under a minute,
while a group of 9 divergent Enterobacterial genomes can be aligned in
a few hours.
.
Mauve computes and interactively visualizes genome sequence comparisons.
Using FastA or GenBank sequence data, Mauve constructs multiple genome
alignments that identify large-scale rearrangement, gene gain, gene loss,
indels, and nucleotide substutition.
.
Mauve is developed at the University of Wisconsin.
