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libvcflib package

libvcflib 1.0.7+dfsg-1 source package in Ubuntu

Changelog

libvcflib (1.0.7+dfsg-1) unstable; urgency=medium

  [ Andreas Tille ]
  * New upstream version
  * Standards-Version: 4.6.2 (routine-update)
  * Do not support ZIG compiler which is not packaged yet
  * Build-Depends: python3-pybind11, libtabixpp-dev
  * Fix name of upstream download tarball in watch file
  * Versioned Build-Depends: libwfa2-dev (>= 2.3.2)
  * Do not exclude Files that are not in upstream tarball any more
  * New upstream version 1.0.6+dfsg

  [ Nilesh Patra ]
  * d/rules: Set WFA_GITMODULE to OFF
  * Refresh/update patches
  * Add some ext modules that are missed out in the tarball
  * Add rules for getting ext libs to contrib and adding clean rules for
    pruning them off for consecutive clean builds
  * Add build depends on libhts-dev and python3-dev
  * Pass more flags to get past the configure step
  * d/rules: Get tests running, do not install py shared object lib

 -- Andreas Tille <email address hidden>  Tue, 07 Feb 2023 18:37:40 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

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Downloads

File Size SHA-256 Checksum
libvcflib_1.0.7+dfsg-1.dsc 2.3 KiB 67f7c7691b4f7f442479262860dc96720509aa38b4050a4c84b5a604cb151804
libvcflib_1.0.7+dfsg.orig.tar.xz 8.6 MiB 5c4b5c3f132e2f3b8b1816ce8d1dd8063a289642cec3bb905e6fa2b10b431016
libvcflib_1.0.7+dfsg-1.debian.tar.xz 71.8 KiB a99dda833a5ba6f21b34c91da0865b27920b7dc2df7adc89904f43239be86f8b

Available diffs

No changes file available.

Binary packages built by this source

libvcflib-dev: C++ library for parsing and manipulating VCF files (development)

 The Variant Call Format (VCF) is a flat-file, tab-delimited textual format
 intended to concisely describe reference-indexed variations between
 individuals. VCF provides a common interchange format for the description of
 variation in individuals and populations of samples, and has become the defacto
 standard reporting format for a wide array of genomic variant detectors.
 .
 vcflib provides methods to manipulate and interpret sequence variation as it
 can be described by VCF. It is both:
 .
  * an API for parsing and operating on records of genomic variation as it can
    be described by the VCF format,
  * and a collection of command-line utilities for executing complex
    manipulations on VCF files.
 .
 This package contains the static library and the header files.

libvcflib-tools: C++ library for parsing and manipulating VCF files (tools)

 The Variant Call Format (VCF) is a flat-file, tab-delimited textual format
 intended to concisely describe reference-indexed variations between
 individuals. VCF provides a common interchange format for the description of
 variation in individuals and populations of samples, and has become the defacto
 standard reporting format for a wide array of genomic variant detectors.
 .
 vcflib provides methods to manipulate and interpret sequence variation as it
 can be described by VCF. It is both:
 .
  * an API for parsing and operating on records of genomic variation as it can
    be described by the VCF format,
  * and a collection of command-line utilities for executing complex
    manipulations on VCF files.
 .
 This package contains several tools using the library.

libvcflib-tools-dbgsym: debug symbols for libvcflib-tools
libvcflib1: C++ library for parsing and manipulating VCF files

 The Variant Call Format (VCF) is a flat-file, tab-delimited textual format
 intended to concisely describe reference-indexed variations between
 individuals. VCF provides a common interchange format for the description of
 variation in individuals and populations of samples, and has become the defacto
 standard reporting format for a wide array of genomic variant detectors.
 .
 vcflib provides methods to manipulate and interpret sequence variation as it
 can be described by VCF. It is both:
 .
  * an API for parsing and operating on records of genomic variation as it can
    be described by the VCF format,
  * and a collection of command-line utilities for executing complex
    manipulations on VCF files.

libvcflib1-dbgsym: debug symbols for libvcflib1