libtfbs-perl 0.7.1-3 source package in Ubuntu


libtfbs-perl (0.7.1-3) unstable; urgency=medium

  [ Xavier Guimard ]
  * Fix autopkgtest control for autodep8+pkg-perl-autopkgtest transition
    Closes: #940674

  [ Andreas Tille ]
  * debhelper-compat 12
  * Standards-Version: 4.4.0
  * Remove trailing whitespace in debian/changelog
  * Set fields Upstream-Name, Upstream-Contact in debian/copyright.
  * Remove obsolete fields Name, Contact from debian/upstream/metadata.

 -- Andreas Tille <email address hidden>  Thu, 19 Sep 2019 17:34:02 +0200

Upload details

Uploaded by:
Debian Med on 2019-09-19
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Groovy release on 2020-04-24 universe perl
Focal release on 2019-11-02 universe perl


File Size SHA-256 Checksum
libtfbs-perl_0.7.1-3.dsc 2.2 KiB 5f4ff450f9037228591f6b603a2f36a9b7be3225beb5710553ed117c6b5828c7
libtfbs-perl_0.7.1.orig.tar.gz 379.3 KiB 26a09a3dfff5abeee6b2bdfd8a07023d99ace3d3e28352a3e856c271186f23aa
libtfbs-perl_0.7.1-3.debian.tar.xz 6.1 KiB 905c4803ae4b94cea80f44aa1aa6962f2b572dd7706ea1452fdcc319d1158e59

No changes file available.

Binary packages built by this source

libtfbs-perl: scanning DNA sequence with a position weight matrix

 The TFBS perl modules comprise a set of routines to interact with the
 Transfac and Jaspar databases that describe a special family of proteins,
 the transcription factors. These bind to genomic DNA to initiate (or
 prevent) the readout of a gene. Once multiple binding sites are known
 for a transcription factor, these are gathered in a single file and are
 aligned in order to find position-specific characteristica that might
 be used to predict such binding events in novel DNA sequences.
 If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
 TFBS: Computational framework for transcription factor binding site analysis.
 Bioinformatics 18:1135-1136".
 Note: the TFBS perl module is no longer under active development. All the
 functionality can be found in the TFBSTools Bioconductor package; users are
 highly encouraged to switch. <>

libtfbs-perl-dbgsym: debug symbols for libtfbs-perl