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libtfbs-perl package

libtfbs-perl 0.6.1+dfsg-1build1 source package in Ubuntu

Changelog

libtfbs-perl (0.6.1+dfsg-1build1) utopic; urgency=medium

  * No change rebuild.
 -- Matthias Klose <email address hidden>   Fri, 22 Aug 2014 10:00:42 +0200

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Uploaded by:
Matthias Klose
Uploaded to:
Utopic
Original maintainer:
Debian Med
Architectures:
any
Section:
perl
Urgency:
Medium Urgency

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File Size SHA-256 Checksum
libtfbs-perl_0.6.1+dfsg.orig.tar.xz 159.3 KiB 7bbbfd6fcea6aff65c2658539afc8562401c368c38cf5f5db946dd39ad8a641b
libtfbs-perl_0.6.1+dfsg-1build1.debian.tar.xz 4.5 KiB ac81a382965fcfaf637e5572a79690a0bb580aec18470700e2ad79e56a21b790
libtfbs-perl_0.6.1+dfsg-1build1.dsc 1.5 KiB dd16cb57219229562e5c1dd53b161da9ed81c986cc356e44b1c9aa8f6d250f3c

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Binary packages built by this source

libtfbs-perl: scanning DNA sequence with a position weight matrix

 The TFBS perl modules comprise a set of routines to interact with the
 Transfac and Jaspar databases that describe a special family of proteins,
 the transcription factors. These bind to genomic DNA to initiate (or
 prevent) the readout of a gene. Once multiple binding sites are known
 for a transcription factor, these are gathered in a single file and are
 aligned in order to find position-specific characteristica that might
 be used to predict such binding events in novel DNA sequences.
 .
 If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
 TFBS: Computational framework for transcription factor binding site analysis.
 Bioinformatics 18:1135-1136".