libseqlib 1.2.0+dfsg-11build2 source package in Ubuntu
Changelog
libseqlib (1.2.0+dfsg-11build2) noble; urgency=medium * No-change rebuild for CVE-2024-3094 -- Steve Langasek <email address hidden> Sun, 31 Mar 2024 19:36:26 +0000
Upload details
- Uploaded by:
- Steve Langasek
- Uploaded to:
- Noble
- Original maintainer:
- Ubuntu Developers
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Oracular | release | universe | misc | |
Noble | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
libseqlib_1.2.0+dfsg.orig.tar.xz | 145.5 KiB | 408ee92e5041ff45d9d259d1507ef783e74c565d02e0c623ef0a67a7c387b953 |
libseqlib_1.2.0+dfsg-11build2.debian.tar.xz | 15.3 KiB | a1100752ca654f8d1d1c615d4991d1da6243697959f08c0aa31c38cf80dd185d |
libseqlib_1.2.0+dfsg-11build2.dsc | 2.3 KiB | 789c06b88310451275cbf82bdc7564c8c98df85fc9d7d0406f8f63acfa41106b |
Available diffs
Binary packages built by this source
- libseqlib-dev: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)
C++ API and command line tool that provides a rapid and user-friendly
interface to BAM/SAM/CRAM files, global sequence alignment operations
and sequence assembly. Four C libraries perform core operations in
SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
and Fermi for error correction and sequence assembly. Benchmarking
indicates that SeqLib has lower CPU and memory requirements than leading
C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
and assemble reads from a CRAM file and then align with BWA-MEM.
SeqLib also provides additional capabilities, including chromosome-aware
interval queries and read plotting. Command line tools are available for
performing integrated error correction, micro-assemblies and alignment.
.
This package contains the header files and static library.
- libseqlib2: C++ htslib/bwa-mem/fermi interface for interrogating sequence data
C++ API and command line tool that provides a rapid and user-friendly
interface to BAM/SAM/CRAM files, global sequence alignment operations
and sequence assembly. Four C libraries perform core operations in
SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
and Fermi for error correction and sequence assembly. Benchmarking
indicates that SeqLib has lower CPU and memory requirements than leading
C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
and assemble reads from a CRAM file and then align with BWA-MEM.
SeqLib also provides additional capabilities, including chromosome-aware
interval queries and read plotting. Command line tools are available for
performing integrated error correction, micro-assemblies and alignment.
- libseqlib2-dbgsym: debug symbols for libseqlib2