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libseqlib package

libseqlib 1.1.1+dfsg-5 source package in Ubuntu

Changelog

libseqlib (1.1.1+dfsg-5) unstable; urgency=medium

  [ Adam Conrad ]
  * Add missing -lz to pkg-config for linking with zlib
    Closes: #893192

 -- Andreas Tille <email address hidden>  Sat, 17 Mar 2018 10:51:57 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Bionic release universe misc

Downloads

File Size SHA-256 Checksum
libseqlib_1.1.1+dfsg-5.dsc 2.2 KiB b4523348788d9fd7998a2c248c05046fa9d95b73f44cb8af20fb0ca896e09cce
libseqlib_1.1.1+dfsg.orig.tar.xz 159.1 KiB 7c9a95a3ecb093e5eac5490d771871565f69bbfc50f62d3fe6d3802878753bd6
libseqlib_1.1.1+dfsg-5.debian.tar.xz 6.8 KiB 384c2f1cfe62761d57a376b771857c9408a46364f25bc1c7986f12a2f1474215

No changes file available.

Binary packages built by this source

libseqlib-dev: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.
 .
 This package contains the header files and static library.

libseqlib0: C++ htslib/bwa-mem/fermi interface for interrogating sequence data

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.

libseqlib0-dbgsym: debug symbols for libseqlib0