RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux bos01-ppc64el-007 4.4.0-98-generic #121-Ubuntu SMP Tue Oct 10 14:23:01 UTC 2017 ppc64le Buildd toolchain package versions: launchpad-buildd_154 python-lpbuildd_154 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.3 dpkg-dev_1.18.4ubuntu1.2 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 16 Nov 12:06:23 ntpdate[1838]: adjust time server 10.211.37.1 offset -0.004329 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=bionic --arch=ppc64el PACKAGEBUILD-13737812 /home/buildd/filecache-default/64ab4a3b1843816d631a3747c16f42fa2d8de59d Creating target for build PACKAGEBUILD-13737812 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=bionic --arch=ppc64el PACKAGEBUILD-13737812 Starting target for build PACKAGEBUILD-13737812 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=bionic --arch=ppc64el PACKAGEBUILD-13737812 'deb http://ftpmaster.internal/ubuntu bionic main universe' 'deb http://ftpmaster.internal/ubuntu bionic-security main universe' 'deb http://ftpmaster.internal/ubuntu bionic-updates main universe' 'deb http://ftpmaster.internal/ubuntu bionic-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-13737812 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=bionic --arch=ppc64el PACKAGEBUILD-13737812 Updating target for build PACKAGEBUILD-13737812 Get:1 http://ftpmaster.internal/ubuntu bionic InRelease [235 kB] Get:2 http://ftpmaster.internal/ubuntu bionic-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu bionic-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu bionic-proposed InRelease [85.4 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/main ppc64el Packages [1009 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main Translation-en [536 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/universe ppc64el Packages [7967 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/universe Translation-en [4858 kB] Get:9 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el Packages [165 kB] Get:10 http://ftpmaster.internal/ubuntu bionic-proposed/main Translation-en [87.7 kB] Get:11 http://ftpmaster.internal/ubuntu bionic-proposed/universe ppc64el Packages [744 kB] Get:12 http://ftpmaster.internal/ubuntu bionic-proposed/universe Translation-en [415 kB] Fetched 16.2 MB in 8s (1859 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libasn1-8-heimdal libcurl3-gnutls libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libidn2-0 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libunistring0 libwind0-heimdal Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: liblsan0 libtsan0 The following packages will be upgraded: apt apt-transport-https base-files base-passwd binutils binutils-common binutils-powerpc64le-linux-gnu bsdutils build-essential coreutils cpp-7 debconf debianutils dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++-7 gcc-7 gcc-7-base gnupg gnupg-agent gpgv libapparmor1 libapt-pkg5.0 libasan4 libatomic1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcomerr2 libcurl3-gnutls libdpkg-perl libfdisk1 libgcc-7-dev libgcc1 libgcrypt20 libgmp10 libgomp1 libgpg-error0 libhogweed4 libip4tc0 libitm1 libkeyutils1 libmount1 libnettle6 libnpth0 libp11-kit0 libpcre3 libperl5.26 libpng16-16 libpsl5 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libssl1.0.0 libstdc++-7-dev libstdc++6 libsystemd0 libubsan0 libudev1 libuuid1 linux-libc-dev mount multiarch-support openssl perl perl-base perl-modules-5.26 pinentry-curses sensible-utils systemd systemd-sysv sysvinit-utils tzdata util-linux 88 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 58.5 MB of archives. After this operation, 8932 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu bionic/main ppc64el base-files ppc64el 10ubuntu1 [55.9 kB] Get:2 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el bsdutils ppc64el 1:2.30.1-0ubuntu5 [61.7 kB] Get:3 http://ftpmaster.internal/ubuntu bionic/main ppc64el coreutils ppc64el 8.26-3ubuntu4 [1251 kB] Get:4 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el debianutils ppc64el 4.8.3 [86.0 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/main ppc64el dpkg ppc64el 1.19.0.4ubuntu1 [1149 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main ppc64el libc6-dev ppc64el 2.26-0ubuntu2 [2458 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/main ppc64el libc-dev-bin ppc64el 2.26-0ubuntu2 [65.4 kB] Get:8 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el linux-libc-dev ppc64el 4.13.0-17.20 [955 kB] Get:9 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libitm1 ppc64el 7.2.0-16ubuntu1 [29.8 kB] Get:10 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el gcc-7-base ppc64el 7.2.0-16ubuntu1 [18.5 kB] Get:11 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libgcc1 ppc64el 1:7.2.0-16ubuntu1 [29.8 kB] Get:12 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libgomp1 ppc64el 7.2.0-16ubuntu1 [69.2 kB] Get:13 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libatomic1 ppc64el 7.2.0-16ubuntu1 [8560 B] Get:14 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libasan4 ppc64el 7.2.0-16ubuntu1 [367 kB] Get:15 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el liblsan0 ppc64el 7.2.0-16ubuntu1 [134 kB] Get:16 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libtsan0 ppc64el 7.2.0-16ubuntu1 [287 kB] Get:17 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libubsan0 ppc64el 7.2.0-16ubuntu1 [136 kB] Get:18 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el cpp-7 ppc64el 7.2.0-16ubuntu1 [6263 kB] Get:19 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libcc1-0 ppc64el 7.2.0-16ubuntu1 [39.3 kB] Get:20 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el g++-7 ppc64el 7.2.0-16ubuntu1 [7103 kB] Get:21 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el gcc-7 ppc64el 7.2.0-16ubuntu1 [6898 kB] Get:22 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libgcc-7-dev ppc64el 7.2.0-16ubuntu1 [987 kB] Get:23 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libstdc++-7-dev ppc64el 7.2.0-16ubuntu1 [1524 kB] Get:24 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libstdc++6 ppc64el 7.2.0-16ubuntu1 [441 kB] Get:25 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libgmp10 ppc64el 2:6.1.2+dfsg-1.1 [218 kB] Get:26 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libbinutils ppc64el 2.29.1-8ubuntu1 [458 kB] Get:27 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el binutils ppc64el 2.29.1-8ubuntu1 [3404 B] Get:28 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el binutils-common ppc64el 2.29.1-8ubuntu1 [190 kB] Get:29 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.29.1-8ubuntu1 [1971 kB] Get:30 http://ftpmaster.internal/ubuntu bionic/main ppc64el libc6 ppc64el 2.26-0ubuntu2 [2619 kB] Get:31 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el e2fslibs ppc64el 1.43.7-1 [173 kB] Get:32 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el e2fsprogs ppc64el 1.43.7-1 [510 kB] Get:33 http://ftpmaster.internal/ubuntu bionic/main ppc64el findutils ppc64el 4.6.0+git+20170828-2 [314 kB] Get:34 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el perl-modules-5.26 all 5.26.1-2ubuntu1 [2760 kB] Get:35 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libperl5.26 ppc64el 5.26.1-2ubuntu1 [3405 kB] Get:36 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el perl ppc64el 5.26.1-2ubuntu1 [201 kB] Get:37 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el perl-base ppc64el 5.26.1-2ubuntu1 [1303 kB] Get:38 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libuuid1 ppc64el 2.30.1-0ubuntu5 [15.3 kB] Get:39 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libblkid1 ppc64el 2.30.1-0ubuntu5 [128 kB] Get:40 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libfdisk1 ppc64el 2.30.1-0ubuntu5 [160 kB] Get:41 http://ftpmaster.internal/ubuntu bionic/main ppc64el libpcre3 ppc64el 2:8.39-5ubuntu3 [224 kB] Get:42 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libselinux1 ppc64el 2.7-2 [78.6 kB] Get:43 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libmount1 ppc64el 2.30.1-0ubuntu5 [139 kB] Get:44 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libsmartcols1 ppc64el 2.30.1-0ubuntu5 [84.6 kB] Get:45 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el fdisk ppc64el 2.30.1-0ubuntu5 [108 kB] Get:46 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el util-linux ppc64el 2.30.1-0ubuntu5 [878 kB] Get:47 http://ftpmaster.internal/ubuntu bionic/main ppc64el base-passwd ppc64el 3.5.44 [50.1 kB] Get:48 http://ftpmaster.internal/ubuntu bionic/main ppc64el libc-bin ppc64el 2.26-0ubuntu2 [573 kB] Get:49 http://ftpmaster.internal/ubuntu bionic/main ppc64el sysvinit-utils ppc64el 2.88dsf-59.10ubuntu1 [20.6 kB] Get:50 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libudev1 ppc64el 235-2ubuntu3 [60.2 kB] Get:51 http://ftpmaster.internal/ubuntu bionic/main ppc64el libapt-pkg5.0 ppc64el 1.6~alpha5 [878 kB] Get:52 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libgpg-error0 ppc64el 1.27-5 [42.1 kB] Get:53 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libgcrypt20 ppc64el 1.8.1-4 [448 kB] Get:54 http://ftpmaster.internal/ubuntu bionic/main ppc64el gpgv ppc64el 2.1.15-1ubuntu8 [218 kB] Get:55 http://ftpmaster.internal/ubuntu bionic/main ppc64el libseccomp2 ppc64el 2.3.1-2.1ubuntu3 [47.2 kB] Get:56 http://ftpmaster.internal/ubuntu bionic/main ppc64el apt ppc64el 1.6~alpha5 [1191 kB] Get:57 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el debconf all 1.5.65 [124 kB] Get:58 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libapparmor1 ppc64el 2.11.0-2ubuntu18 [29.9 kB] Get:59 http://ftpmaster.internal/ubuntu bionic/main ppc64el libcap2 ppc64el 1:2.25-1.1 [13.7 kB] Get:60 http://ftpmaster.internal/ubuntu bionic/main ppc64el libip4tc0 ppc64el 1.6.1-2ubuntu2 [23.6 kB] Get:61 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el mount ppc64el 2.30.1-0ubuntu5 [111 kB] Get:62 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el systemd ppc64el 235-2ubuntu3 [2958 kB] Get:63 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libsystemd0 ppc64el 235-2ubuntu3 [213 kB] Get:64 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el systemd-sysv ppc64el 235-2ubuntu3 [12.4 kB] Get:65 http://ftpmaster.internal/ubuntu bionic/main ppc64el libcap-ng0 ppc64el 0.7.7-3.1 [11.6 kB] Get:66 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libcomerr2 ppc64el 1.43.7-1 [11.6 kB] Get:67 http://ftpmaster.internal/ubuntu bionic/main ppc64el libsemanage-common all 2.7-2 [6916 B] Get:68 http://ftpmaster.internal/ubuntu bionic/main ppc64el libsemanage1 ppc64el 2.7-2 [85.4 kB] Get:69 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libss2 ppc64el 1.43.7-1 [11.4 kB] Get:70 http://ftpmaster.internal/ubuntu bionic/main ppc64el libnettle6 ppc64el 3.3-2 [120 kB] Get:71 http://ftpmaster.internal/ubuntu bionic/main ppc64el libhogweed4 ppc64el 3.3-2 [134 kB] Get:72 http://ftpmaster.internal/ubuntu bionic/main ppc64el libp11-kit0 ppc64el 0.23.9-2 [167 kB] Get:73 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el sensible-utils all 0.0.11 [14.8 kB] Get:74 http://ftpmaster.internal/ubuntu bionic/main ppc64el pinentry-curses ppc64el 1.0.0-3 [37.5 kB] Get:75 http://ftpmaster.internal/ubuntu bionic/main ppc64el libnpth0 ppc64el 1.5-3 [7780 B] Get:76 http://ftpmaster.internal/ubuntu bionic/main ppc64el gnupg ppc64el 2.1.15-1ubuntu8 [847 kB] Get:77 http://ftpmaster.internal/ubuntu bionic/main ppc64el gnupg-agent ppc64el 2.1.15-1ubuntu8 [291 kB] Get:78 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libsqlite3-0 ppc64el 3.21.0-1 [464 kB] Get:79 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libssl1.0.0 ppc64el 1.0.2g-1ubuntu14 [880 kB] Get:80 http://ftpmaster.internal/ubuntu bionic/main ppc64el multiarch-support ppc64el 2.26-0ubuntu2 [6832 B] Get:81 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el openssl ppc64el 1.0.2g-1ubuntu14 [520 kB] Get:82 http://ftpmaster.internal/ubuntu bionic/main ppc64el tzdata all 2017c-1 [188 kB] Get:83 http://ftpmaster.internal/ubuntu bionic/main ppc64el libkeyutils1 ppc64el 1.5.9-9.1ubuntu1 [9896 B] Get:84 http://ftpmaster.internal/ubuntu bionic/main ppc64el libpng16-16 ppc64el 1.6.34-1 [200 kB] Get:85 http://ftpmaster.internal/ubuntu bionic/main ppc64el apt-transport-https all 1.6~alpha5 [1692 B] Get:86 http://ftpmaster.internal/ubuntu bionic/main ppc64el dpkg-dev all 1.19.0.4ubuntu1 [607 kB] Get:87 http://ftpmaster.internal/ubuntu bionic/main ppc64el libdpkg-perl all 1.19.0.4ubuntu1 [211 kB] Get:88 http://ftpmaster.internal/ubuntu bionic/main ppc64el build-essential ppc64el 12.4ubuntu1 [4754 B] Get:89 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libpsl5 ppc64el 0.19.1-3 [43.0 kB] Get:90 http://ftpmaster.internal/ubuntu bionic/main ppc64el libcurl3-gnutls ppc64el 7.55.1-1ubuntu2.1 [197 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 58.5 MB in 20s (2814 kB/s) (Reading database ... 12537 files and directories currently installed.) Preparing to unpack .../base-files_10ubuntu1_ppc64el.deb ... Unpacking base-files (10ubuntu1) over (9.6ubuntu101) ... Setting up base-files (10ubuntu1) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12537 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.30.1-0ubuntu5_ppc64el.deb ... Unpacking bsdutils (1:2.30.1-0ubuntu5) over (1:2.30.1-0ubuntu4) ... Setting up bsdutils (1:2.30.1-0ubuntu5) ... (Reading database ... 12537 files and directories currently installed.) Preparing to unpack .../coreutils_8.26-3ubuntu4_ppc64el.deb ... Unpacking coreutils (8.26-3ubuntu4) over (8.26-3ubuntu3) ... Setting up coreutils (8.26-3ubuntu4) ... (Reading database ... 12537 files and directories currently installed.) 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RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-13737812 ppc64el bionic-proposed -c chroot:build-PACKAGEBUILD-13737812 --arch=ppc64el --dist=bionic-proposed --nolog librcsb-core-wrapper_1.005-5build1.dsc Initiating build PACKAGEBUILD-13737812 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-98-generic #121-Ubuntu SMP Tue Oct 10 14:23:01 UTC 2017 ppc64le sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos01-ppc64el-007.buildd +==============================================================================+ | librcsb-core-wrapper 1.005-5build1 (ppc64el) 16 Nov 2017 12:07 | +==============================================================================+ Package: librcsb-core-wrapper Version: 1.005-5build1 Source Version: 1.005-5build1 Distribution: bionic-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el I: NOTICE: Log filtering will replace 'build/librcsb-core-wrapper-RB7ZzL/librcsb-core-wrapper-1.005' with '<>' I: NOTICE: Log filtering will replace 'build/librcsb-core-wrapper-RB7ZzL' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-13737812/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- librcsb-core-wrapper_1.005-5build1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-48HTpZ/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-48HTpZ/apt_archive ./ InRelease Get:2 copy:/<>/resolver-48HTpZ/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-48HTpZ/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-48HTpZ/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-48HTpZ/apt_archive ./ Packages [528 B] Fetched 2861 B in 0s (131 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libasn1-8-heimdal libcurl3-gnutls libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libidn2-0 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libunistring0 libwind0-heimdal Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-48HTpZ/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12547 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 10), doxygen, graphviz, libboost-python-dev, libxerces-c-dev, python-all-dev, libtool, libtool-bin, bison, flex Filtered Build-Depends: debhelper (>= 10), doxygen, graphviz, libboost-python-dev, libxerces-c-dev, python-all-dev, libtool, libtool-bin, bison, flex dpkg-deb: building package 'sbuild-build-depends-librcsb-core-wrapper-dummy' in '/<>/resolver-AUmhEy/apt_archive/sbuild-build-depends-librcsb-core-wrapper-dummy.deb'. Ign:1 copy:/<>/resolver-AUmhEy/apt_archive ./ InRelease Get:2 copy:/<>/resolver-AUmhEy/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-AUmhEy/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-AUmhEy/apt_archive ./ Sources [274 B] Get:5 copy:/<>/resolver-AUmhEy/apt_archive ./ Packages [599 B] Fetched 2992 B in 0s (130 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install librcsb-core-wrapper build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism doxygen file flex fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base icu-devtools intltool-debian libarchive-zip-perl libbison-dev libboost-python-dev libboost-python1.65-dev libboost-python1.65.1 libboost1.65-dev libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-5.0 libcroco3 libdatrie1 libedit2 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd3 libglib2.0-0 libgraphite2-3 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu-dev libicu60 libjbig0 libjpeg-turbo8 libjpeg8 libllvm5.0 libltdl7 libmagic-mgc libmagic1 libmpdec2 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.6 libpython3.6-dev libpython3.6-minimal libpython3.6-stdlib libsigsegv2 libsm6 libthai-data libthai0 libtiff5 libtimedate-perl libtool libtool-bin libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db mime-support po-debconf python python-all python-all-dev python-dev python-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-dev python3-minimal python3.6 python3.6-dev python3.6-minimal ucf x11-common Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist whois vacation dh-make dwz doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff libboost1.65-doc gccxml libboost-atomic1.65-dev libboost-chrono1.65-dev libboost-container1.65-dev libboost-context1.65-dev libboost-coroutine1.65-dev libboost-date-time1.65-dev libboost-exception1.65-dev libboost-fiber1.65-dev libboost-filesystem1.65-dev libboost-graph1.65-dev libboost-graph-parallel1.65-dev libboost-iostreams1.65-dev libboost-locale1.65-dev libboost-log1.65-dev libboost-math1.65-dev libboost-mpi1.65-dev libboost-mpi-python1.65-dev libboost-numpy1.65-dev libboost-program-options1.65-dev libboost-random1.65-dev libboost-regex1.65-dev libboost-serialization1.65-dev libboost-signals1.65-dev libboost-stacktrace1.65-dev libboost-system1.65-dev libboost-test1.65-dev libboost-thread1.65-dev libboost-timer1.65-dev libboost-type-erasure1.65-dev libboost-wave1.65-dev libboost1.65-tools-dev libmpfrc++-dev libntl-dev libgd-tools icu-doc libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools libxerces-c-doc m4-doc less www-browser libmail-box-perl python-doc python-tk python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3.6-venv python3.6-doc Recommended packages: libfl-dev curl | wget | lynx-cur fonts-liberation libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following packages will be REMOVED: pkg-create-dbgsym* The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism doxygen file flex fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base icu-devtools intltool-debian libarchive-zip-perl libbison-dev libboost-python-dev libboost-python1.65-dev libboost-python1.65.1 libboost1.65-dev libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-5.0 libcroco3 libdatrie1 libedit2 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgd3 libglib2.0-0 libgraphite2-3 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu-dev libicu60 libjbig0 libjpeg-turbo8 libjpeg8 libllvm5.0 libltdl7 libmagic-mgc libmagic1 libmpdec2 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.6 libpython3.6-dev libpython3.6-minimal libpython3.6-stdlib libsigsegv2 libsm6 libthai-data libthai0 libtiff5 libtimedate-perl libtool libtool-bin libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db mime-support po-debconf python python-all python-all-dev python-dev python-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-dev python3-minimal python3.6 python3.6-dev python3.6-minimal sbuild-build-depends-librcsb-core-wrapper-dummy ucf x11-common 0 upgraded, 124 newly installed, 1 to remove and 0 not upgraded. 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bionic-proposed/main ppc64el debhelper all 10.10.7ubuntu2 [872 kB] Get:70 http://ftpmaster.internal/ubuntu bionic/main ppc64el libllvm5.0 ppc64el 1:5.0-4 [12.8 MB] Get:71 http://ftpmaster.internal/ubuntu bionic/main ppc64el libclang1-5.0 ppc64el 1:5.0-4 [6637 kB] Get:72 http://ftpmaster.internal/ubuntu bionic/main ppc64el libxapian30 ppc64el 1.4.5-1 [805 kB] Get:73 http://ftpmaster.internal/ubuntu bionic/main ppc64el doxygen ppc64el 1.8.13-9 [4000 kB] Get:74 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libcdt5 ppc64el 2.38.0-18ubuntu1 [22.2 kB] Get:75 http://ftpmaster.internal/ubuntu bionic-proposed/main ppc64el libcgraph6 ppc64el 2.38.0-18ubuntu1 [42.4 kB] Get:76 http://ftpmaster.internal/ubuntu bionic/main ppc64el libjpeg8 ppc64el 8c-2ubuntu8 [2146 B] Get:77 http://ftpmaster.internal/ubuntu bionic/main ppc64el libtiff5 ppc64el 4.0.8-6 [165 kB] Get:78 http://ftpmaster.internal/ubuntu bionic/main ppc64el libwebp6 ppc64el 0.6.0-3 [205 kB] Get:79 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Unpacking libicu-dev (60.1-1ubuntu2) ... Selecting previously unselected package libpython-all-dev:ppc64el. Preparing to unpack .../76-libpython-all-dev_2.7.14-2ubuntu1_ppc64el.deb ... Unpacking libpython-all-dev:ppc64el (2.7.14-2ubuntu1) ... Selecting previously unselected package libtool-bin. Preparing to unpack .../77-libtool-bin_2.4.6-2_ppc64el.deb ... Unpacking libtool-bin (2.4.6-2) ... Selecting previously unselected package libxerces-c3.2:ppc64el. Preparing to unpack .../78-libxerces-c3.2_3.2.0+debian-2_ppc64el.deb ... Unpacking libxerces-c3.2:ppc64el (3.2.0+debian-2) ... Selecting previously unselected package libxerces-c-dev. Preparing to unpack .../79-libxerces-c-dev_3.2.0+debian-2_ppc64el.deb ... Unpacking libxerces-c-dev (3.2.0+debian-2) ... Selecting previously unselected package python-all. Preparing to unpack .../80-python-all_2.7.14-2ubuntu1_ppc64el.deb ... Unpacking python-all (2.7.14-2ubuntu1) ... Selecting previously unselected package python-all-dev. Preparing to unpack .../81-python-all-dev_2.7.14-2ubuntu1_ppc64el.deb ... Unpacking python-all-dev (2.7.14-2ubuntu1) ... Selecting previously unselected package sbuild-build-depends-librcsb-core-wrapper-dummy. Preparing to unpack .../82-sbuild-build-depends-librcsb-core-wrapper-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-librcsb-core-wrapper-dummy (0.invalid.0) ... Setting up libedit2:ppc64el (3.1-20170329-1) ... Setting up libxapian30:ppc64el (1.4.5-1) ... Setting up libpathplan4 (2.38.0-18ubuntu1) ... Setting up libicu60:ppc64el (60.1-1ubuntu2) ... Setting up libboost-python1.65.1 (1.65.1+dfsg-0ubuntu4) ... Setting up libarchive-zip-perl (1.59-1) ... Setting up mime-support (3.60ubuntu1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libjbig0:ppc64el (2.1-3.1) ... Setting up libsigsegv2:ppc64el (2.11-1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up groff-base (1.22.3-9) ... Setting up libglib2.0-0:ppc64el (2.54.1-1ubuntu1) ... No schema files found: doing nothing. Setting up libllvm5.0:ppc64el (1:5.0-4) ... Setting up libdatrie1:ppc64el (0.2.10-5) ... Setting up gettext-base (0.19.8.1-4ubuntu1) ... Setting up libjpeg-turbo8:ppc64el (1.5.2-0ubuntu5) ... Setting up libpipeline1:ppc64el (1.5.0-1) ... Setting up m4 (1.4.18-1) ... Setting up libbsd0:ppc64el (0.8.6-3) ... Setting up ucf (3.0036) ... Setting up libclang1-5.0:ppc64el (1:5.0-4) ... Setting up libxml2:ppc64el (2.9.4+dfsg1-5ubuntu2) ... Setting up libfreetype6:ppc64el (2.8-0.2ubuntu2) ... Setting up libmagic-mgc (1:5.32-1) ... Setting up libmagic1:ppc64el (1:5.32-1) ... Setting up libgraphite2-3:ppc64el (1.3.10-6) ... Setting up libcroco3:ppc64el (0.6.12-1) ... Setting up libpixman-1-0:ppc64el (0.34.0-1) ... Processing triggers for libc-bin (2.26-0ubuntu2) ... Setting up autotools-dev (20161112.1+nmu1) ... Processing triggers for systemd (235-2ubuntu3) ... Setting up libltdl7:ppc64el (2.4.6-2) ... Setting up libbison-dev:ppc64el (2:3.0.4.dfsg-1build1) ... Setting up libexpat1-dev:ppc64el (2.2.3-2) ... Setting up icu-devtools (60.1-1ubuntu2) ... Setting up libthai-data (0.1.27-1) ... Setting up bison (2:3.0.4.dfsg-1build1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up libxdmcp6:ppc64el (1:1.1.2-3) ... Setting up bsdmainutils (9.0.14ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up x11-common (1:7.7+19ubuntu3) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libboost1.65-dev:ppc64el (1.65.1+dfsg-0ubuntu4) ... Setting up libcdt5 (2.38.0-18ubuntu1) ... Setting up libx11-data (2:1.6.4-3) ... Setting up libpython2.7-stdlib:ppc64el (2.7.14-2ubuntu2) ... Setting up libxau6:ppc64el (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-4ubuntu1) ... Setting up libmpdec2:ppc64el (2.4.2-1) ... Setting up libxerces-c3.2:ppc64el (3.2.0+debian-2) ... Setting up libcgraph6 (2.38.0-18ubuntu1) ... Setting up libwebp6:ppc64el (0.6.0-3) ... Setting up libfile-stripnondeterminism-perl (0.040-1) ... Setting up libjpeg8:ppc64el (8c-2ubuntu8) ... Setting up libpython3.6-stdlib:ppc64el (3.6.3-1ubuntu1) ... Setting up fontconfig-config (2.12.6-0ubuntu1) ... Setting up python3.6 (3.6.3-1ubuntu1) ... Setting up gettext (0.19.8.1-4ubuntu1) ... Setting up flex (2.6.1-1.3) ... Setting up libgvpr2 (2.38.0-18ubuntu1) ... Setting up doxygen (1.8.13-9) ... Setting up python2.7 (2.7.14-2ubuntu2) ... Setting up libharfbuzz0b:ppc64el (1.6.3-1build1) ... Setting up libtiff5:ppc64el (4.0.8-6) ... Setting up autoconf (2.69-11) ... Setting up libthai0:ppc64el (0.1.27-1) ... Setting up libicu-dev (60.1-1ubuntu2) ... Setting up file (1:5.32-1) ... Setting up libpython-stdlib:ppc64el (2.7.14-2ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libpython2.7:ppc64el (2.7.14-2ubuntu2) ... Setting up automake (1:1.15.1-3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libice6:ppc64el (2:1.0.9-2) ... Setting up man-db (2.7.6.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2.7-dev:ppc64el (2.7.14-2ubuntu2) ... Setting up python2.7-dev (2.7.14-2ubuntu2) ... Setting up libxcb1:ppc64el (1.12-1ubuntu1) ... Setting up python (2.7.14-2ubuntu1) ... Setting up libpython3.6:ppc64el (3.6.3-1ubuntu1) ... Setting up libtool (2.4.6-2) ... Setting up libpython3-stdlib:ppc64el (3.6.3-2) ... Setting up libpython-dev:ppc64el (2.7.14-2ubuntu1) ... Setting up libtool-bin (2.4.6-2) ... Setting up libfontconfig1:ppc64el (2.12.6-0ubuntu1) ... Setting up libsm6:ppc64el (2:1.2.2-1) ... Setting up libxerces-c-dev (3.2.0+debian-2) ... Setting up libxcb-render0:ppc64el (1.12-1ubuntu1) ... Setting up po-debconf (1.0.20) ... Setting up python-dev (2.7.14-2ubuntu1) ... Setting up libx11-6:ppc64el (2:1.6.4-3) ... Setting up libpython-all-dev:ppc64el (2.7.14-2ubuntu1) ... Setting up libpython3.6-dev:ppc64el (3.6.3-1ubuntu1) ... Setting up libxcb-shm0:ppc64el (1.12-1ubuntu1) ... Setting up libxpm4:ppc64el (1:3.5.12-1) ... Setting up libxt6:ppc64el (1:1.1.5-1) ... Setting up libxrender1:ppc64el (1:0.9.10-1) ... Setting up python3.6-dev (3.6.3-1ubuntu1) ... Setting up python-all (2.7.14-2ubuntu1) ... Setting up fontconfig (2.12.6-0ubuntu1) ... Regenerating fonts cache... done. Setting up libpython3-dev:ppc64el (3.6.3-2) ... Setting up libxext6:ppc64el (2:1.3.3-1) ... Setting up libgd3:ppc64el (2.2.5-4) ... Setting up libxmu6:ppc64el (2:1.1.2-2) ... Setting up python-all-dev (2.7.14-2ubuntu1) ... Setting up libpango-1.0-0:ppc64el (1.40.13-2) ... Setting up libxaw7:ppc64el (2:1.0.13-1) ... Setting up libcairo2:ppc64el (1.15.8-2) ... Setting up libpangoft2-1.0-0:ppc64el (1.40.13-2) ... Setting up libpangocairo-1.0-0:ppc64el (1.40.13-2) ... Setting up libgvc6 (2.38.0-18ubuntu1) ... Setting up graphviz (2.38.0-18ubuntu1) ... Setting up python3 (3.6.3-2) ... Setting up python3-dev (3.6.3-2) ... Setting up libboost-python1.65-dev (1.65.1+dfsg-0ubuntu4) ... Setting up dh-python (2.20170125) ... Setting up libboost-python-dev (1.65.1.0ubuntu1) ... Setting up debhelper (10.10.7ubuntu2) ... Setting up dh-autoreconf (15) ... Setting up dh-strip-nondeterminism (0.040-1) ... Setting up sbuild-build-depends-librcsb-core-wrapper-dummy (0.invalid.0) ... (Reading database ... 31849 files and directories currently installed.) Purging configuration files for pkg-create-dbgsym (0.73) ... Processing triggers for libc-bin (2.26-0ubuntu2) ... Processing triggers for systemd (235-2ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-98-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.29.1-8ubuntu1 dpkg-dev_1.19.0.4ubuntu1 g++-7_7.2.0-16ubuntu1 gcc-7_7.2.0-16ubuntu1 libc6-dev_2.26-0ubuntu2 libstdc++-7-dev_7.2.0-16ubuntu1 libstdc++6_7.2.0-16ubuntu1 linux-libc-dev_4.13.0-17.20 Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_2.0-1 apt_1.6~alpha5 apt-transport-https_1.6~alpha5 autoconf_2.69-11 automake_1:1.15.1-3ubuntu1 autopoint_0.19.8.1-4ubuntu1 autotools-dev_20161112.1+nmu1 base-files_10ubuntu1 base-passwd_3.5.44 bash_4.4-5ubuntu1 binutils_2.29.1-8ubuntu1 binutils-common_2.29.1-8ubuntu1 binutils-powerpc64le-linux-gnu_2.29.1-8ubuntu1 bison_2:3.0.4.dfsg-1build1 bsdmainutils_9.0.14ubuntu1 bsdutils_1:2.30.1-0ubuntu5 build-essential_12.4ubuntu1 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.26-3ubuntu4 cpp_4:7.2.0-1ubuntu1 cpp-7_7.2.0-16ubuntu1 dash_0.5.8-2.3ubuntu1 debconf_1.5.65 debhelper_10.10.7ubuntu2 debianutils_4.8.3 dh-autoreconf_15 dh-python_2.20170125 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dmsetup_2:1.02.137-2ubuntu3 doxygen_1.8.13-9 dpkg_1.19.0.4ubuntu1 dpkg-dev_1.19.0.4ubuntu1 e2fslibs_1.43.7-1 e2fsprogs_1.43.7-1 fakeroot_1.21-1ubuntu2 fdisk_2.30.1-0ubuntu5 file_1:5.32-1 findutils_4.6.0+git+20170828-2 flex_2.6.1-1.3 fontconfig_2.12.6-0ubuntu1 fontconfig-config_2.12.6-0ubuntu1 fonts-dejavu-core_2.37-1 g++_4:7.2.0-1ubuntu1 g++-7_7.2.0-16ubuntu1 gcc_4:7.2.0-1ubuntu1 gcc-7_7.2.0-16ubuntu1 gcc-7-base_7.2.0-16ubuntu1 gettext_0.19.8.1-4ubuntu1 gettext-base_0.19.8.1-4ubuntu1 gnupg_2.1.15-1ubuntu8 gnupg-agent_2.1.15-1ubuntu8 gpgv_2.1.15-1ubuntu8 graphviz_2.38.0-18ubuntu1 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5ubuntu1 hostname_3.18 icu-devtools_60.1-1ubuntu2 init_1.49ubuntu1 init-system-helpers_1.49ubuntu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.11.0-2ubuntu18 libapt-pkg5.0_1.6~alpha5 libarchive-zip-perl_1.59-1 libasan4_7.2.0-16ubuntu1 libasn1-8-heimdal_7.4.0.dfsg.1-2 libassuan0_2.4.3-3 libatomic1_7.2.0-16ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.7.7-1ubuntu2 libaudit1_1:2.7.7-1ubuntu2 libbinutils_2.29.1-8ubuntu1 libbison-dev_2:3.0.4.dfsg-1build1 libblkid1_2.30.1-0ubuntu5 libboost-python-dev_1.65.1.0ubuntu1 libboost-python1.65-dev_1.65.1+dfsg-0ubuntu4 libboost-python1.65.1_1.65.1+dfsg-0ubuntu4 libboost1.65-dev_1.65.1+dfsg-0ubuntu4 libbsd0_0.8.6-3 libbz2-1.0_1.0.6-8.1 libc-bin_2.26-0ubuntu2 libc-dev-bin_2.26-0ubuntu2 libc6_2.26-0ubuntu2 libc6-dev_2.26-0ubuntu2 libcairo2_1.15.8-2 libcap-ng0_0.7.7-3.1 libcap2_1:2.25-1.1 libcc1-0_7.2.0-16ubuntu1 libcdt5_2.38.0-18ubuntu1 libcgraph6_2.38.0-18ubuntu1 libclang1-5.0_1:5.0-4 libcomerr2_1.43.7-1 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.3-4ubuntu1 libcurl3-gnutls_7.55.1-1ubuntu2.1 libdatrie1_0.2.10-5 libdb5.3_5.3.28-13.1 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.137-2ubuntu3 libdpkg-perl_1.19.0.4ubuntu1 libedit2_3.1-20170329-1 libexpat1_2.2.3-2 libexpat1-dev_2.2.3-2 libfakeroot_1.21-1ubuntu2 libfdisk1_2.30.1-0ubuntu5 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.040-1 libfontconfig1_2.12.6-0ubuntu1 libfreetype6_2.8-0.2ubuntu2 libgcc-7-dev_7.2.0-16ubuntu1 libgcc1_1:7.2.0-16ubuntu1 libgcrypt20_1.8.1-4 libgd3_2.2.5-4 libgdbm3_1.8.3-14 libglib2.0-0_2.54.1-1ubuntu1 libgmp10_2:6.1.2+dfsg-1.1 libgnutls30_3.5.8-6ubuntu3 libgomp1_7.2.0-16ubuntu1 libgpg-error0_1.27-5 libgraphite2-3_1.3.10-6 libgssapi-krb5-2_1.15.1-2 libgssapi3-heimdal_7.4.0.dfsg.1-2 libgvc6_2.38.0-18ubuntu1 libgvpr2_2.38.0-18ubuntu1 libharfbuzz0b_1.6.3-1build1 libhcrypto4-heimdal_7.4.0.dfsg.1-2 libheimbase1-heimdal_7.4.0.dfsg.1-2 libheimntlm0-heimdal_7.4.0.dfsg.1-2 libhogweed4_3.3-2 libhx509-5-heimdal_7.4.0.dfsg.1-2 libice6_2:1.0.9-2 libicu-dev_60.1-1ubuntu2 libicu60_60.1-1ubuntu2 libidn11_1.33-2 libidn2-0_2.0.2-5 libip4tc0_1.6.1-2ubuntu2 libisl15_0.18-1 libitm1_7.2.0-16ubuntu1 libjbig0_2.1-3.1 libjpeg-turbo8_1.5.2-0ubuntu5 libjpeg8_8c-2ubuntu8 libk5crypto3_1.15.1-2 libkeyutils1_1.5.9-9.1ubuntu1 libkmod2_24-1ubuntu2 libkrb5-26-heimdal_7.4.0.dfsg.1-2 libkrb5-3_1.15.1-2 libkrb5support0_1.15.1-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1ubuntu1 libldap-common_2.4.45+dfsg-1ubuntu1 libllvm5.0_1:5.0-4 liblockfile-bin_1.14-1 liblockfile1_1.14-1 liblsan0_7.2.0-16ubuntu1 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmount1_2.30.1-0ubuntu5 libmpc3_1.0.3-2 libmpdec2_2.4.2-1 libmpfr4_3.1.6-1 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.3-2 libnpth0_1.5-3 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.2ubuntu3 libpam-modules-bin_1.1.8-3.2ubuntu3 libpam-runtime_1.1.8-3.2ubuntu3 libpam0g_1.1.8-3.2ubuntu3 libpango-1.0-0_1.40.13-2 libpangocairo-1.0-0_1.40.13-2 libpangoft2-1.0-0_1.40.13-2 libpathplan4_2.38.0-18ubuntu1 libpcre3_2:8.39-5ubuntu3 libperl5.26_5.26.1-2ubuntu1 libpipeline1_1.5.0-1 libpixman-1-0_0.34.0-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-1ubuntu2 libpsl5_0.19.1-3 libpython-all-dev_2.7.14-2ubuntu1 libpython-dev_2.7.14-2ubuntu1 libpython-stdlib_2.7.14-2ubuntu1 libpython2.7_2.7.14-2ubuntu2 libpython2.7-dev_2.7.14-2ubuntu2 libpython2.7-minimal_2.7.14-2ubuntu2 libpython2.7-stdlib_2.7.14-2ubuntu2 libpython3-dev_3.6.3-2 libpython3-stdlib_3.6.3-2 libpython3.6_3.6.3-1ubuntu1 libpython3.6-dev_3.6.3-1ubuntu1 libpython3.6-minimal_3.6.3-1ubuntu1 libpython3.6-stdlib_3.6.3-1ubuntu1 libreadline7_7.0-0ubuntu2 libroken18-heimdal_7.4.0.dfsg.1-2 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3ubuntu1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3ubuntu1 libseccomp2_2.3.1-2.1ubuntu3 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.11-1 libslang2_2.3.1-5ubuntu1 libsm6_2:1.2.2-1 libsmartcols1_2.30.1-0ubuntu5 libsqlite3-0_3.21.0-1 libss2_1.43.7-1 libssl1.0.0_1.0.2g-1ubuntu14 libstdc++-7-dev_7.2.0-16ubuntu1 libstdc++6_7.2.0-16ubuntu1 libsystemd0_235-2ubuntu3 libtasn1-6_4.12-2.1 libthai-data_0.1.27-1 libthai0_0.1.27-1 libtiff5_4.0.8-6 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-2 libtool-bin_2.4.6-2 libtsan0_7.2.0-16ubuntu1 libubsan0_7.2.0-16ubuntu1 libudev1_235-2ubuntu3 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-31 libustr-1.0-1_1.0.4-6 libuuid1_2.30.1-0ubuntu5 libwebp6_0.6.0-3 libwind0-heimdal_7.4.0.dfsg.1-2 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libxapian30_1.4.5-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-render0_1.12-1ubuntu1 libxcb-shm0_1.12-1ubuntu1 libxcb1_1.12-1ubuntu1 libxdmcp6_1:1.1.2-3 libxerces-c-dev_3.2.0+debian-2 libxerces-c3.2_3.2.0+debian-2 libxext6_2:1.3.3-1 libxml2_2.9.4+dfsg1-5ubuntu2 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 linux-libc-dev_4.13.0-17.20 lockfile-progs_0.1.17build1 login_1:4.2-3.2ubuntu4 lsb-base_9.20160110ubuntu5 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17ubuntu2 mime-support_3.60ubuntu1 mount_2.30.1-0ubuntu5 multiarch-support_2.26-0ubuntu2 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 openssl_1.0.2g-1ubuntu14 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu4 patch_2.7.5-1build1 perl_5.26.1-2ubuntu1 perl-base_5.26.1-2ubuntu1 perl-modules-5.26_5.26.1-2ubuntu1 pinentry-curses_1.0.0-3 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 python_2.7.14-2ubuntu1 python-all_2.7.14-2ubuntu1 python-all-dev_2.7.14-2ubuntu1 python-dev_2.7.14-2ubuntu1 python-minimal_2.7.14-2ubuntu1 python2.7_2.7.14-2ubuntu2 python2.7-dev_2.7.14-2ubuntu2 python2.7-minimal_2.7.14-2ubuntu2 python3_3.6.3-2 python3-dev_3.6.3-2 python3-minimal_3.6.3-2 python3.6_3.6.3-1ubuntu1 python3.6-dev_3.6.3-1ubuntu1 python3.6-minimal_3.6.3-1ubuntu1 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-librcsb-core-wrapper-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.11 systemd_235-2ubuntu3 systemd-sysv_235-2ubuntu3 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu1 tar_1.29b-2 tzdata_2017c-1 ubuntu-keyring_2016.10.27 ucf_3.0036 util-linux_2.30.1-0ubuntu5 x11-common_1:7.7+19ubuntu3 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Nov 16 12:04:14 2017 UTC gpgv: using RSA key gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./librcsb-core-wrapper_1.005-5build1.dsc dpkg-source: info: extracting librcsb-core-wrapper in librcsb-core-wrapper-1.005 dpkg-source: info: unpacking librcsb-core-wrapper_1.005.orig.tar.gz dpkg-source: info: unpacking librcsb-core-wrapper_1.005-5build1.debian.tar.xz dpkg-source: info: applying wrapper-module dpkg-source: info: applying rm-duplicate-module dpkg-source: info: applying bash dpkg-source: info: applying unistd dpkg-source: info: applying devnull-log dpkg-source: info: applying docs dpkg-source: info: applying objectfiles dpkg-source: info: applying parallel-build dpkg-source: info: applying setup.py.in dpkg-source: info: applying hardening dpkg-source: info: applying spelling dpkg-source: info: applying exit-in-shlib dpkg-source: info: applying make_test_target dpkg-source: info: applying regcomp_cert_fix.patch dpkg-source: info: applying gcc5.patch dpkg-source: info: applying xerces32.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-13737812 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-13737812 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-13737812 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package librcsb-core-wrapper dpkg-buildpackage: info: source version 1.005-5build1 dpkg-buildpackage: info: source distribution bionic dpkg-source --before-build librcsb-core-wrapper-1.005 dpkg-buildpackage: info: host architecture ppc64el fakeroot debian/rules clean dh clean --with python2 debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j4 clean make[2]: Entering directory '/<>' rm -rf docs rm -rf rcsb ------------------------------------------------------------ **** Cleaning etc **** ------------------------------------------------------------ ------------------------------------------------------------ **** Cleaning test results in dict-obj-file **** ------------------------------------------------------------ ------------------------------------------------------------ **** Cleaning common **** ------------------------------------------------------------ make[3]: Entering directory '/<>/dict-obj-file' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Makefile:31: ../etc/Makefile.platform: No such file or directory make[3]: Entering directory '/<>/common' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Cleaning test results in pdbml-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/pdbml-parser' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Makefile:35: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/common' ------------------------------------------------------------ **** Cleaning tables **** ------------------------------------------------------------ make[3]: Entering directory '/<>/tables' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/pdbml-parser' Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/tables' ------------------------------------------------------------ **** Cleaning regex **** ------------------------------------------------------------ make[3]: Entering directory '/<>/regex' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Makefile:30: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/regex' ------------------------------------------------------------ **** Cleaning cif-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/cif-file' ------------------------------------------------------------ **** Cleaning cif-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-parser' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/cif-parser' ------------------------------------------------------------ **** Cleaning cif-file-util **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file-util' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Makefile:28: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/cif-file-util' ------------------------------------------------------------ **** Cleaning dict-obj-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/dict-obj-file' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Makefile:31: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Cleaning pdbml-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/pdbml-parser' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Makefile:35: ../etc/Makefile.platform: No such file or directory make[3]: Leaving directory '/<>/pdbml-parser' ------------------------------------------------------------ **** Cleaning cctbx **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cctbx' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/cctbx' make[2]: Leaving directory '/<>' rm -rf wrapper/python/build make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch --with python2 dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j4 make[2]: Entering directory '/<>' sh -c '\ export PIC=-fPIC; \ export WWPDB_XERCESC_INC=/usr/include; \ export WWPDB_XERCESC_LIB_DIR=/usr/lib; \ export WWPDB_XERCESC_LIB=xerces-c; \ ( cd ./util; ./compile.sh ); \ libtool --mode=link g++ -version-info 0:1:0 -rpath /usr/lib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -l${WWPDB_XERCESC_LIB} -o lib/librcsb-core-wrapper.la lib/*.lo' ------------------------------------------------------------ **** Making etc **** ------------------------------------------------------------ Using platform specific configuration for system: gnu4 Platform configuration done. ------------------------------------------------------------ **** Making common **** ------------------------------------------------------------ make[3]: Entering directory '/<>/common' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbPlatform.C -o ./obj/RcsbPlatform.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbFile.C -o ./obj/RcsbFile.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/BlockIO.C -o ./obj/BlockIO.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Serializer.C -o ./obj/Serializer.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbFile.C -fPIC -DPIC -o ./obj/.libs/RcsbFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Serializer.C -fPIC -DPIC -o ./obj/.libs/Serializer.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/BlockIO.C -fPIC -DPIC -o ./obj/.libs/BlockIO.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbPlatform.C -fPIC -DPIC -o ./obj/.libs/RcsbPlatform.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbPlatform.C -o ./obj/RcsbPlatform.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenString.C -o ./obj/GenString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenString.C -fPIC -DPIC -o ./obj/.libs/GenString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/BlockIO.C -o ./obj/BlockIO.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbFile.C -o ./obj/RcsbFile.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifString.C -o ./obj/CifString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifString.C -fPIC -DPIC -o ./obj/.libs/CifString.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenCont.C -o ./obj/GenCont.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenCont.C -fPIC -DPIC -o ./obj/.libs/GenCont.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenString.C -o ./obj/GenString.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifString.C -o ./obj/CifString.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenCont.C -o ./obj/GenCont.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Serializer.C -o ./obj/Serializer.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Exceptions.C -o ./obj/Exceptions.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Exceptions.C -fPIC -DPIC -o ./obj/.libs/Exceptions.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DataInfo.C -o ./obj/DataInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DataInfo.C -fPIC -DPIC -o ./obj/.libs/DataInfo.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_vector.C -o ./obj/mapped_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Exceptions.C -o ./obj/Exceptions.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_vector.C -fPIC -DPIC -o ./obj/.libs/mapped_vector.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_ptr_vector.C -o ./obj/mapped_ptr_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_vector.C -o ./obj/mapped_vector.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_ptr_vector.C -fPIC -DPIC -o ./obj/.libs/mapped_ptr_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DataInfo.C -o ./obj/DataInfo.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_ptr_vector.C -o ./obj/mapped_ptr_vector.o >/dev/null 2>&1 a - RcsbPlatform.o a - RcsbFile.o a - BlockIO.o a - Serializer.o a - GenString.o a - CifString.o a - GenCont.o a - Exceptions.o a - DataInfo.o a - mapped_vector.o a - mapped_ptr_vector.o cp -f -t ../lib ./obj/RcsbPlatform.o ./obj/RcsbFile.o ./obj/BlockIO.o ./obj/Serializer.o ./obj/GenString.o ./obj/CifString.o ./obj/GenCont.o ./obj/Exceptions.o ./obj/DataInfo.o ./obj/mapped_vector.o ./obj/mapped_ptr_vector.o ./obj/RcsbPlatform.lo ./obj/RcsbFile.lo ./obj/BlockIO.lo ./obj/Serializer.lo ./obj/GenString.lo ./obj/CifString.lo ./obj/GenCont.lo ./obj/Exceptions.lo ./obj/DataInfo.lo ./obj/mapped_vector.lo ./obj/mapped_ptr_vector.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/RcsbPlatform.o ./obj/.libs/RcsbFile.o ./obj/.libs/BlockIO.o ./obj/.libs/Serializer.o ./obj/.libs/GenString.o ./obj/.libs/CifString.o ./obj/.libs/GenCont.o ./obj/.libs/Exceptions.o ./obj/.libs/DataInfo.o ./obj/.libs/mapped_vector.o ./obj/.libs/mapped_ptr_vector.o true lib/common.a lib/common.a is up to date. ../etc/cifinstall -m 0444 ./lib/common.a ../lib x - RcsbPlatform.o x - RcsbFile.o x - BlockIO.o x - Serializer.o x - GenString.o x - CifString.o x - GenCont.o x - Exceptions.o x - DataInfo.o x - mapped_vector.o x - mapped_ptr_vector.o x - RcsbPlatform.o x - RcsbFile.o x - BlockIO.o x - Serializer.o x - GenString.o x - CifString.o x - GenCont.o x - Exceptions.o x - DataInfo.o x - mapped_vector.o x - mapped_ptr_vector.o a - BlockIO.o a - CifString.o a - DataInfo.o a - Exceptions.o a - GenCont.o a - GenString.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - mapped_ptr_vector.o a - mapped_vector.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/common' ------------------------------------------------------------ **** Making tables **** ------------------------------------------------------------ make[3]: Entering directory '/<>/tables' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TTable.C -o ./obj/TTable.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ITTable.C -o ./obj/ITTable.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ISTable.C -o ./obj/ISTable.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TableFile.C -o ./obj/TableFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ITTable.C -fPIC -DPIC -o ./obj/.libs/ITTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TableFile.C -fPIC -DPIC -o ./obj/.libs/TableFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TTable.C -fPIC -DPIC -o ./obj/.libs/TTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ISTable.C -fPIC -DPIC -o ./obj/.libs/ISTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TTable.C -o ./obj/TTable.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TableFile.C -o ./obj/TableFile.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ITTable.C -o ./obj/ITTable.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ISTable.C -o ./obj/ISTable.o >/dev/null 2>&1 a - TTable.o a - ITTable.o a - ISTable.o a - TableFile.o cp -f -t ../lib ./obj/TTable.o ./obj/ITTable.o ./obj/ISTable.o ./obj/TableFile.o ./obj/TTable.lo ./obj/ITTable.lo ./obj/ISTable.lo ./obj/TableFile.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/TTable.o ./obj/.libs/ITTable.o ./obj/.libs/ISTable.o ./obj/.libs/TableFile.o true lib/tables.a lib/tables.a is up to date. ../etc/cifinstall -m 0444 ./lib/tables.a ../lib x - BlockIO.o x - CifString.o x - DataInfo.o x - Exceptions.o x - GenCont.o x - GenString.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - mapped_ptr_vector.o x - mapped_vector.o x - TTable.o x - ITTable.o x - ISTable.o x - TableFile.o a - BlockIO.o a - CifString.o a - DataInfo.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/tables' ------------------------------------------------------------ **** Making regex **** ------------------------------------------------------------ make[3]: Entering directory '/<>/regex' libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regcomp.c -o ./obj/regcomp.o libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regexec.c -o ./obj/regexec.o libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regerror.c -o ./obj/regerror.o libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regfree.c -o ./obj/regfree.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regerror.c -fPIC -DPIC -o ./obj/.libs/regerror.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regexec.c -fPIC -DPIC -o ./obj/.libs/regexec.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regcomp.c -fPIC -DPIC -o ./obj/.libs/regcomp.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regfree.c -fPIC -DPIC -o ./obj/.libs/regfree.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regfree.c -o ./obj/regfree.o >/dev/null 2>&1 libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regerror.c -o ./obj/regerror.o >/dev/null 2>&1 libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regcomp.c -o ./obj/regcomp.o >/dev/null 2>&1 libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regexec.c -o ./obj/regexec.o >/dev/null 2>&1 a - regcomp.o a - regexec.o a - regerror.o a - regfree.o cp -f -t ../lib ./obj/regcomp.o ./obj/regexec.o ./obj/regerror.o ./obj/regfree.o ./obj/regcomp.lo ./obj/regexec.lo ./obj/regerror.lo ./obj/regfree.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/regcomp.o ./obj/.libs/regexec.o ./obj/.libs/regerror.o ./obj/.libs/regfree.o true lib/regex.a lib/regex.a is up to date. ../etc/cifinstall -m 0444 ./lib/regex.a ../lib x - BlockIO.o x - CifString.o x - DataInfo.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regexec.o x - regerror.o x - regfree.o a - BlockIO.o a - CifString.o a - DataInfo.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/regex' ------------------------------------------------------------ **** Making cif-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFile.C -o ./obj/CifFile.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DicFile.C -o ./obj/DicFile.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ParentChild.C -o ./obj/ParentChild.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParentChild.C -o ./obj/CifParentChild.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFile.C -fPIC -DPIC -o ./obj/.libs/CifFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParentChild.C -fPIC -DPIC -o ./obj/.libs/CifParentChild.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ParentChild.C -fPIC -DPIC -o ./obj/.libs/ParentChild.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DicFile.C -fPIC -DPIC -o ./obj/.libs/DicFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DicFile.C -o ./obj/DicFile.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParentChild.C -o ./obj/CifParentChild.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ParentChild.C -o ./obj/ParentChild.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFile.C -o ./obj/CifFile.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifDataInfo.C -o ./obj/CifDataInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifDataInfo.C -fPIC -DPIC -o ./obj/.libs/CifDataInfo.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifExcept.C -o ./obj/CifExcept.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifDataInfo.C -o ./obj/CifDataInfo.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifExcept.C -fPIC -DPIC -o ./obj/.libs/CifExcept.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifExcept.C -o ./obj/CifExcept.o >/dev/null 2>&1 a - CifFile.o a - DicFile.o a - ParentChild.o a - CifParentChild.o a - CifDataInfo.o a - CifExcept.o cp -f -t ../lib ./obj/CifFile.o ./obj/DicFile.o ./obj/ParentChild.o ./obj/CifParentChild.o ./obj/CifDataInfo.o ./obj/CifExcept.o ./obj/CifFile.lo ./obj/DicFile.lo ./obj/ParentChild.lo ./obj/CifParentChild.lo ./obj/CifDataInfo.lo ./obj/CifExcept.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/CifFile.o ./obj/.libs/DicFile.o ./obj/.libs/ParentChild.o ./obj/.libs/CifParentChild.o ./obj/.libs/CifDataInfo.o ./obj/.libs/CifExcept.o true lib/cif-file.a lib/cif-file.a is up to date. ../etc/cifinstall -m 0444 ./lib/cif-file.a ../lib x - BlockIO.o x - CifString.o x - DataInfo.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - CifFile.o x - DicFile.o x - ParentChild.o x - CifParentChild.o x - CifDataInfo.o x - CifExcept.o a - BlockIO.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifParentChild.o a - CifString.o a - DataInfo.o a - DicFile.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/cif-file' ------------------------------------------------------------ **** Making cif-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-parser' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileReadDef.C -o ./obj/CifFileReadDef.o sh -c 'cd ./src; bison -d -v -l -p cifparser_ ../src/CifParser.y' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParserBase.C -o ./obj/CifParserBase.o sh -c 'cd ./src; bison -d -v -l -p dicparser_ ../src/DICParser.y' mv src/CifParser.tab.c src/CifParser.c mv src/CifParser.tab.h src/CifParser.h libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParser.c -o obj/CifParser.o mv src/DICParser.tab.c src/DICParser.c mv src/DICParser.tab.h src/DICParser.h libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParser.c -o obj/DICParser.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileReadDef.C -fPIC -DPIC -o ./obj/.libs/CifFileReadDef.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParserBase.C -fPIC -DPIC -o ./obj/.libs/CifParserBase.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParser.c -fPIC -DPIC -o obj/.libs/DICParser.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParser.c -fPIC -DPIC -o obj/.libs/CifParser.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParser.c -o obj/DICParser.o >/dev/null 2>&1 libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParser.c -o obj/CifParser.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParserBase.C -o ./obj/DICParserBase.o flex -Cfr -L -Pcifparser_ -t ./src/CifScanner.l > ./src/CifScanner.c libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/CifScanner.c -o ./obj/CifScanner.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParserBase.C -fPIC -DPIC -o ./obj/.libs/DICParserBase.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/CifScanner.c -fPIC -DPIC -o ./obj/.libs/CifScanner.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/CifScanner.c -o ./obj/CifScanner.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileReadDef.C -o ./obj/CifFileReadDef.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifScannerBase.C -o ./obj/CifScannerBase.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifScannerBase.C -fPIC -DPIC -o ./obj/.libs/CifScannerBase.o flex -Cfr -L -Pdicparser_ -t ./src/DICScanner.l > ./src/DICScanner.c libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/DICScanner.c -o ./obj/DICScanner.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/DICScanner.c -fPIC -DPIC -o ./obj/.libs/DICScanner.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/DICScanner.c -o ./obj/DICScanner.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParserBase.C -o ./obj/CifParserBase.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifScannerBase.C -o ./obj/CifScannerBase.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICScannerBase.C -o ./obj/DICScannerBase.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICScannerBase.C -fPIC -DPIC -o ./obj/.libs/DICScannerBase.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParserBase.C -o ./obj/DICParserBase.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICScannerBase.C -o ./obj/DICScannerBase.o >/dev/null 2>&1 a - CifFileReadDef.o a - CifScanner.o a - CifScannerBase.o a - CifParser.o a - CifParserBase.o a - DICScanner.o a - DICScannerBase.o a - DICParser.o a - DICParserBase.o cp -f -t ../lib ./obj/CifFileReadDef.o ./obj/CifScanner.o ./obj/CifScannerBase.o ./obj/CifParser.o ./obj/CifParserBase.o ./obj/DICScanner.o ./obj/DICScannerBase.o ./obj/DICParser.o ./obj/DICParserBase.o ./obj/CifFileReadDef.lo ./obj/CifScanner.lo ./obj/CifScannerBase.lo ./obj/CifParser.lo ./obj/CifParserBase.lo ./obj/DICScanner.lo ./obj/DICScannerBase.lo ./obj/DICParser.lo ./obj/DICParserBase.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/CifFileReadDef.o ./obj/.libs/CifScanner.o ./obj/.libs/CifScannerBase.o ./obj/.libs/CifParser.o ./obj/.libs/CifParserBase.o ./obj/.libs/DICScanner.o ./obj/.libs/DICScannerBase.o ./obj/.libs/DICParser.o ./obj/.libs/DICParserBase.o true lib/cifparse-obj.a lib/cifparse-obj.a is up to date. ../etc/cifinstall -m 0444 ./lib/cifparse-obj.a ../lib x - BlockIO.o x - CifDataInfo.o x - CifExcept.o x - CifFile.o x - CifParentChild.o x - CifString.o x - DataInfo.o x - DicFile.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - ParentChild.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - CifFileReadDef.o x - CifScanner.o x - CifScannerBase.o x - CifParser.o x - CifParserBase.o x - DICScanner.o x - DICScannerBase.o x - DICParser.o x - DICParserBase.o a - BlockIO.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifFileReadDef.o a - CifParentChild.o a - CifParser.o a - CifParserBase.o a - CifScanner.o a - CifScannerBase.o a - CifString.o a - DICParser.o a - DICParserBase.o a - DICScanner.o a - DICScannerBase.o a - DataInfo.o a - DicFile.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib rm src/DICParser.h src/CifParser.h make[3]: Leaving directory '/<>/cif-parser' ------------------------------------------------------------ **** Making cif-file-util **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file-util' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileUtil.C -o ./obj/CifFileUtil.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifCorrector.C -o ./obj/CifCorrector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifCorrector.C -fPIC -DPIC -o ./obj/.libs/CifCorrector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileUtil.C -fPIC -DPIC -o ./obj/.libs/CifFileUtil.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileUtil.C -o ./obj/CifFileUtil.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifCorrector.C -o ./obj/CifCorrector.o >/dev/null 2>&1 a - CifFileUtil.o a - CifCorrector.o cp -f -t ../lib ./obj/CifFileUtil.o ./obj/CifCorrector.o ./obj/CifFileUtil.lo ./obj/CifCorrector.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/CifFileUtil.o ./obj/.libs/CifCorrector.o true lib/cif-file-util.a lib/cif-file-util.a is up to date. ../etc/cifinstall -m 0444 ./lib/cif-file-util.a ../lib x - BlockIO.o x - CifDataInfo.o x - CifExcept.o x - CifFile.o x - CifFileReadDef.o x - CifParentChild.o x - CifParser.o x - CifParserBase.o x - CifScanner.o x - CifScannerBase.o x - CifString.o x - DICParser.o x - DICParserBase.o x - DICScanner.o x - DICScannerBase.o x - DataInfo.o x - DicFile.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - ParentChild.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - CifFileUtil.o x - CifCorrector.o a - BlockIO.o a - CifCorrector.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifFileReadDef.o a - CifFileUtil.o a - CifParentChild.o a - CifParser.o a - CifParserBase.o a - CifScanner.o a - CifScannerBase.o a - CifString.o a - DICParser.o a - DICParserBase.o a - DICScanner.o a - DICScannerBase.o a - DataInfo.o a - DicFile.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/cif-file-util' ------------------------------------------------------------ **** Making dict-obj-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/dict-obj-file' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjContInfo.C -o ./obj/DictObjContInfo.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjCont.C -o ./obj/DictObjCont.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFile.C -o ./obj/DictObjFile.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictDataInfo.C -o ./obj/DictDataInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjContInfo.C -fPIC -DPIC -o ./obj/.libs/DictObjContInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictDataInfo.C -fPIC -DPIC -o ./obj/.libs/DictDataInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFile.C -fPIC -DPIC -o ./obj/.libs/DictObjFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjCont.C -fPIC -DPIC -o ./obj/.libs/DictObjCont.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictDataInfo.C -o ./obj/DictDataInfo.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjContInfo.C -o ./obj/DictObjContInfo.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFile.C -o ./obj/DictObjFile.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictParentChild.C -o ./obj/DictParentChild.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictParentChild.C -fPIC -DPIC -o ./obj/.libs/DictParentChild.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjCont.C -o ./obj/DictObjCont.o >/dev/null 2>&1 g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFileCreator.C -o obj/DictObjFileCreator.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFileReader.C -o obj/DictObjFileReader.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictParentChild.C -o ./obj/DictParentChild.o >/dev/null 2>&1 g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFileSelectiveReader.C -o obj/DictObjFileSelectiveReader.o a - DictObjContInfo.o a - DictObjCont.o a - DictObjFile.o a - DictDataInfo.o a - DictParentChild.o cp -f -t ../lib ./obj/DictObjContInfo.o ./obj/DictObjCont.o ./obj/DictObjFile.o ./obj/DictDataInfo.o ./obj/DictParentChild.o ./obj/DictObjContInfo.lo ./obj/DictObjCont.lo ./obj/DictObjFile.lo ./obj/DictDataInfo.lo ./obj/DictParentChild.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/DictObjContInfo.o ./obj/.libs/DictObjCont.o ./obj/.libs/DictObjFile.o ./obj/.libs/DictDataInfo.o ./obj/.libs/DictParentChild.o true lib/dict-obj-file.a lib/dict-obj-file.a is up to date. ../etc/cifinstall -m 0444 ./lib/dict-obj-file.a ../lib x - BlockIO.o x - CifCorrector.o x - CifDataInfo.o x - CifExcept.o x - CifFile.o x - CifFileReadDef.o x - CifFileUtil.o x - CifParentChild.o x - CifParser.o x - CifParserBase.o x - CifScanner.o x - CifScannerBase.o x - CifString.o x - DICParser.o x - DICParserBase.o x - DICScanner.o x - DICScannerBase.o x - DataInfo.o x - DicFile.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - ParentChild.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - DictObjContInfo.o x - DictObjCont.o x - DictObjFile.o x - DictDataInfo.o x - DictParentChild.o a - BlockIO.o a - CifCorrector.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifFileReadDef.o a - CifFileUtil.o a - CifParentChild.o a - CifParser.o a - CifParserBase.o a - CifScanner.o a - CifScannerBase.o a - CifString.o a - DICParser.o a - DICParserBase.o a - DICScanner.o a - DICScannerBase.o a - DataInfo.o a - DicFile.o a - DictDataInfo.o a - DictObjCont.o a - DictObjContInfo.o a - DictObjFile.o a - DictParentChild.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -w -static obj/DictObjFileCreator.o ../lib/dict-obj-file.a ../lib/cif-file-util.a ../lib/cif-file.a ../lib/cifparse-obj.a ../lib/tables.a ../lib/common.a ../lib/regex.a -lm -o ./bin/DictObjFileCreator g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -w -static obj/DictObjFileReader.o ../lib/dict-obj-file.a ../lib/cif-file-util.a ../lib/cif-file.a ../lib/cifparse-obj.a ../lib/tables.a ../lib/common.a ../lib/regex.a -lm -o ./bin/DictObjFileReader g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -w -static obj/DictObjFileSelectiveReader.o ../lib/dict-obj-file.a ../lib/cif-file-util.a ../lib/cif-file.a ../lib/cifparse-obj.a ../lib/tables.a ../lib/common.a ../lib/regex.a -lm -o ./bin/DictObjFileSelectiveReader make[3]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Making pdbml-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/pdbml-parser' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlFileUtil.C -o ./obj/PdbMlFileUtil.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlParserHandler.C -o ./obj/PdbMlParserHandler.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/misc_util.C -o ./obj/misc_util.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/xml2mmcif.C -o obj/xml2mmcif.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlFileUtil.C -fPIC -DPIC -o ./obj/.libs/PdbMlFileUtil.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/misc_util.C -fPIC -DPIC -o ./obj/.libs/misc_util.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlParserHandler.C -fPIC -DPIC -o ./obj/.libs/PdbMlParserHandler.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlFileUtil.C -o ./obj/PdbMlFileUtil.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/misc_util.C -o ./obj/misc_util.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlParserHandler.C -o ./obj/PdbMlParserHandler.o >/dev/null 2>&1 a - PdbMlFileUtil.o a - PdbMlParserHandler.o a - misc_util.o cp -f -t ../lib ./obj/PdbMlFileUtil.o ./obj/PdbMlParserHandler.o ./obj/misc_util.o ./obj/PdbMlFileUtil.lo ./obj/PdbMlParserHandler.lo ./obj/misc_util.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/PdbMlFileUtil.o ./obj/.libs/PdbMlParserHandler.o ./obj/.libs/misc_util.o true lib/pdbml-parser.a lib/pdbml-parser.a is up to date. ../etc/cifinstall -m 0444 ./lib/pdbml-parser.a ../lib x - BlockIO.o x - CifCorrector.o x - CifDataInfo.o x - CifExcept.o x - CifFile.o x - CifFileReadDef.o x - CifFileUtil.o x - CifParentChild.o x - CifParser.o x - CifParserBase.o x - CifScanner.o x - CifScannerBase.o x - CifString.o x - DICParser.o x - DICParserBase.o x - DICScanner.o x - DICScannerBase.o x - DataInfo.o x - DicFile.o x - DictDataInfo.o x - DictObjCont.o x - DictObjContInfo.o x - DictObjFile.o x - DictParentChild.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - ParentChild.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - PdbMlFileUtil.o x - PdbMlParserHandler.o x - misc_util.o a - BlockIO.o a - CifCorrector.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifFileReadDef.o a - CifFileUtil.o a - CifParentChild.o a - CifParser.o a - CifParserBase.o a - CifScanner.o a - CifScannerBase.o a - CifString.o a - DICParser.o a - DICParserBase.o a - DICScanner.o a - DICScannerBase.o a - DataInfo.o a - DicFile.o a - DictDataInfo.o a - DictObjCont.o a - DictObjContInfo.o a - DictObjFile.o a - DictParentChild.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - PdbMlFileUtil.o a - PdbMlParserHandler.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - misc_util.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -w -L/usr/lib obj/xml2mmcif.o ../lib/pdbml-parser.a ../lib/dict-obj-file.a ../lib/cif-file-util.a ../lib/cif-file.a ../lib/cifparse-obj.a ../lib/tables.a ../lib/common.a ../lib/regex.a -lxerces-c -lm -o ./bin/xml2mmcif make[3]: Leaving directory '/<>/pdbml-parser' ------------------------------------------------------------ **** Making cctbx **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cctbx' make[3]: Leaving directory '/<>/cctbx' libtool: link: g++ -fPIC -DPIC -shared lib/.libs/BlockIO.o lib/.libs/CifCorrector.o lib/.libs/CifDataInfo.o lib/.libs/CifExcept.o lib/.libs/CifFile.o lib/.libs/CifFileReadDef.o lib/.libs/CifFileUtil.o lib/.libs/CifParentChild.o lib/.libs/CifParser.o lib/.libs/CifParserBase.o lib/.libs/CifScanner.o lib/.libs/CifScannerBase.o lib/.libs/CifString.o lib/.libs/DICParser.o lib/.libs/DICParserBase.o lib/.libs/DICScanner.o lib/.libs/DICScannerBase.o lib/.libs/DataInfo.o lib/.libs/DicFile.o lib/.libs/DictDataInfo.o lib/.libs/DictObjCont.o lib/.libs/DictObjContInfo.o lib/.libs/DictObjFile.o lib/.libs/DictParentChild.o lib/.libs/Exceptions.o lib/.libs/GenCont.o lib/.libs/GenString.o lib/.libs/ISTable.o lib/.libs/ITTable.o lib/.libs/ParentChild.o lib/.libs/PdbMlFileUtil.o lib/.libs/PdbMlParserHandler.o lib/.libs/RcsbFile.o lib/.libs/RcsbPlatform.o lib/.libs/Serializer.o lib/.libs/TTable.o lib/.libs/TableFile.o lib/.libs/mapped_ptr_vector.o lib/.libs/mapped_vector.o lib/.libs/misc_util.o lib/.libs/regcomp.o lib/.libs/regerror.o lib/.libs/regexec.o lib/.libs/regfree.o -lxerces-c -lstdc++ -lm -lc -lgcc_s -g -O3 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,--as-needed -Wl,-soname -Wl,librcsb-core-wrapper.so.0 -o lib/.libs/librcsb-core-wrapper.so.0.0.1 libtool: link: (cd "lib/.libs" && rm -f "librcsb-core-wrapper.so.0" && ln -s "librcsb-core-wrapper.so.0.0.1" "librcsb-core-wrapper.so.0") libtool: link: (cd "lib/.libs" && rm -f "librcsb-core-wrapper.so" && ln -s "librcsb-core-wrapper.so.0.0.1" "librcsb-core-wrapper.so") libtool: link: ar cru lib/.libs/librcsb-core-wrapper.a lib/BlockIO.o lib/CifCorrector.o lib/CifDataInfo.o lib/CifExcept.o lib/CifFile.o lib/CifFileReadDef.o lib/CifFileUtil.o lib/CifParentChild.o lib/CifParser.o lib/CifParserBase.o lib/CifScanner.o lib/CifScannerBase.o lib/CifString.o lib/DICParser.o lib/DICParserBase.o lib/DICScanner.o lib/DICScannerBase.o lib/DataInfo.o lib/DicFile.o lib/DictDataInfo.o lib/DictObjCont.o lib/DictObjContInfo.o lib/DictObjFile.o lib/DictParentChild.o lib/Exceptions.o lib/GenCont.o lib/GenString.o lib/ISTable.o lib/ITTable.o lib/ParentChild.o lib/PdbMlFileUtil.o lib/PdbMlParserHandler.o lib/RcsbFile.o lib/RcsbPlatform.o lib/Serializer.o lib/TTable.o lib/TableFile.o lib/mapped_ptr_vector.o lib/mapped_vector.o lib/misc_util.o lib/regcomp.o lib/regerror.o lib/regexec.o lib/regfree.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib lib/.libs/librcsb-core-wrapper.a libtool: link: ( cd "lib/.libs" && rm -f "librcsb-core-wrapper.la" && ln -s "../librcsb-core-wrapper.la" "librcsb-core-wrapper.la" ) cd wrapper && make OPT=-O make[3]: Entering directory '/<>/wrapper' sed -e 's!@C++FLAGS@!-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -std=c++11 -Werror -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I -I !g; s!@DEFINES@! -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW !g; s!@EXT_COMP_OPT@!-ftemplate-depth-128 -fno-inline -Wall!; s!@EXT_LIBS_DIRS@!-L -L -L!g; s!@EXT_LIBS@!-l -l -l!g;' < "python/setup.py.in" > "python/setup.py" ln -sf ../src python/src make[3]: Leaving directory '/<>/wrapper' make[2]: Leaving directory '/<>' /usr/bin/make doc make[2]: Entering directory '/<>' rm -rf rcsb && cp -r include rcsb grep -lr '^#include "' rcsb | xargs sed -i -e '/^#include "/{ s/#include "\([^"]\+\)"/#include /; }' mkdir -p docs/doxyfiles echo PROJECT_NAME = librcsb-core-wrapper > docs/doxyfiles/Doxyfile echo PROJECT_NUMBER = 1.005 >> docs/doxyfiles/Doxyfile echo OUTPUT_DIRECTORY = docs >> docs/doxyfiles/Doxyfile echo INPUT = rcsb >> docs/doxyfiles/Doxyfile cat etc/Doxyfile-template >> docs/doxyfiles/Doxyfile doxygen docs/doxyfiles/Doxyfile warning: Tag `USE_WINDOWS_ENCODING' at line 75 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `DETAILS_AT_TOP' at line 177 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `SHOW_DIRECTORIES' at line 411 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `HTML_ALIGN_MEMBERS' at line 732 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `XML_SCHEMA' at line 964 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `XML_DTD' at line 970 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `MAX_DOT_GRAPH_WIDTH' at line 1246 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `MAX_DOT_GRAPH_HEIGHT' at line 1254 of file `docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" make[2]: Leaving directory '/<>' dh_auto_build --sourcedirectory=wrapper/python cd wrapper/python && python setup.py build --force running build running build_ext building 'CorePyWrap' extension creating build creating build/temp.linux-ppc64le-2.7 creating build/temp.linux-ppc64le-2.7/src powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/CifDataInfoPyWrap.C -o build/temp.linux-ppc64le-2.7/src/CifDataInfoPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/TableFilePyWrap.C -o build/temp.linux-ppc64le-2.7/src/TableFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/TypeCodePyWrap.C -o build/temp.linux-ppc64le-2.7/src/TypeCodePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/CorePyWrap.C -o build/temp.linux-ppc64le-2.7/src/CorePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/StlPyWrap.C -o build/temp.linux-ppc64le-2.7/src/StlPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/DataInfoPyWrap.C -o build/temp.linux-ppc64le-2.7/src/DataInfoPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/DictObjFilePyWrap.C -o build/temp.linux-ppc64le-2.7/src/DictObjFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/DictDataInfoPyWrap.C -o build/temp.linux-ppc64le-2.7/src/DictDataInfoPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/ISTablePyWrap.C -o build/temp.linux-ppc64le-2.7/src/ISTablePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW src/ISTablePyWrap.C: In function ‘void InitISTablePyWrapper()’: src/ISTablePyWrap.C:205:268: warning: typedef ‘Search_function_type’ locally defined but not used [-Wunused-local-typedefs] typedef void ( ::ISTable::*Search_function_type )( ::std::vector< unsigned int > &,::std::vector< std::string > const &,::std::vector< std::string > const &,unsigned int const,::ITTable::eSearchDir const,::ITTable::eSearchType const,::std::string const & ) ; ^ src/ISTablePyWrap.C:245:120: warning: typedef ‘GetColumn_function_type’ locally defined but not used [-Wunused-local-typedefs] typedef void ( ::ISTable::*GetColumn_function_type )( ::std::vector< std::string > &,::std::string const & ) ; ^ powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/CharPyWrap.C -o build/temp.linux-ppc64le-2.7/src/CharPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/PdbMlFilePyWrap.C -o build/temp.linux-ppc64le-2.7/src/PdbMlFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/RcsbFilePyWrap.C -o build/temp.linux-ppc64le-2.7/src/RcsbFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/DicFilePyWrap.C -o build/temp.linux-ppc64le-2.7/src/DicFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW powerpc64le-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python2.7 -c src/CifFilePyWrap.C -o build/temp.linux-ppc64le-2.7/src/CifFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW src/CifFilePyWrap.C: In function ‘void InitCifFilePyWrapper()’: src/CifFilePyWrap.C:168:157: warning: typedef ‘GetAttributeValue_function_type’ locally defined but not used [-Wunused-local-typedefs] typedef void ( ::CifFile::*GetAttributeValue_function_type )( ::std::string &,::std::string const &,::std::string const &,::std::string const & ) ; ^ src/CifFilePyWrap.C:182:203: warning: typedef ‘GetAttributeValueIf_function_type’ locally defined but not used [-Wunused-local-typedefs] typedef void ( ::CifFile::*GetAttributeValueIf_function_type )( ::std::string &,::std::string const &,::std::string const &,::std::string const &,::std::string const &,::std::string const & ) ; ^ src/CifFilePyWrap.C:196:173: warning: typedef ‘GetAttributeValues_function_type’ locally defined but not used [-Wunused-local-typedefs] typedef void ( ::CifFile::*GetAttributeValues_function_type )( ::std::vector< std::string > &,::std::string const &,::std::string const &,::std::string const & ) ; ^ src/CifFilePyWrap.C:210:219: warning: typedef ‘GetAttributeValuesIf_function_type’ locally defined but not used [-Wunused-local-typedefs] typedef void ( ::CifFile::*GetAttributeValuesIf_function_type )( ::std::vector< std::string > &,::std::string const &,::std::string const &,::std::string const &,::std::string const &,::std::string const & ) ; ^ creating build/lib.linux-ppc64le-2.7 powerpc64le-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-YLnTZL/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -fexceptions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-ppc64le-2.7/src/CifDataInfoPyWrap.o build/temp.linux-ppc64le-2.7/src/TableFilePyWrap.o build/temp.linux-ppc64le-2.7/src/TypeCodePyWrap.o build/temp.linux-ppc64le-2.7/src/CorePyWrap.o build/temp.linux-ppc64le-2.7/src/StlPyWrap.o build/temp.linux-ppc64le-2.7/src/DataInfoPyWrap.o build/temp.linux-ppc64le-2.7/src/DictObjFilePyWrap.o build/temp.linux-ppc64le-2.7/src/DictDataInfoPyWrap.o build/temp.linux-ppc64le-2.7/src/ISTablePyWrap.o build/temp.linux-ppc64le-2.7/src/CharPyWrap.o build/temp.linux-ppc64le-2.7/src/PdbMlFilePyWrap.o build/temp.linux-ppc64le-2.7/src/RcsbFilePyWrap.o build/temp.linux-ppc64le-2.7/src/DicFilePyWrap.o build/temp.linux-ppc64le-2.7/src/CifFilePyWrap.o -L../../lib/.libs -lrcsb-core-wrapper -lboost_python-py27 -o build/lib.linux-ppc64le-2.7/CorePyWrap.so dh override_dh_auto_build --with python2 make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 test make[1]: Entering directory '/<>' ------- compile targets are compile_lnx_38, compile_lnx_41, compile_wwpdb_py27 and compile_osx ------- ------------------------------------------------------------ **** Testing dict-obj-file **** ------------------------------------------------------------ make[2]: Entering directory '/<>/dict-obj-file' make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Creating mmCIF/DDL object dictionary DictObjFileCreator Version 8.0 Dictionary SDB filename: ./mmcif_std.sdb Object filename: ./mmcif_std.odb Number of dictionary datablocks: 1 Building dictionary object: mmcif_std.dic Writing dictionary object: mmcif_std.dic Last index = 19806 Return code = 0 Running reading test 1 Running reading test 2 Tests execution time is 0 seconds. make[2]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Testing pdbml-parser **** ------------------------------------------------------------ make[2]: Entering directory '/<>/pdbml-parser' make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. /<>/pdbml-parser/test/1ysh.xml Saving 1 columns and 5 rows in table audit_author Saving 19 columns and 1 rows in table pdbx_database_status Saving 5 columns and 1 rows in table database_PDB_rev Saving 7 columns and 3 rows in table struct_ref Saving 11 columns and 3 rows in table struct_ref_seq Saving 12 columns and 3 rows in table struct_ref_seq_dif Saving 3 columns and 1 rows in table struct_keywords Saving 3 columns and 1 rows in table em_assembly Saving 3 columns and 1 rows in table em_sample_preparation Saving 2 columns and 1 rows in table em_sample_support Saving 3 columns and 1 rows in table em_vitrification Saving 2 columns and 1 rows in table symmetry Saving 21 columns and 1 rows in table em_imaging Saving 3 columns and 1 rows in table em_detector Saving 3 columns and 1 rows in table refine Saving 4 columns and 1 rows in table em_3d_reconstruction Saving 13 columns and 1 rows in table database_PDB_matrix Saving 2 columns and 1 rows in table database_PDB_remark Saving 3 columns and 1 rows in table em_2d_projection_selection Saving 3 columns and 1 rows in table em_image_scans Saving 1 columns and 1 rows in table entry Saving 2 columns and 1 rows in table exptl Saving 2 columns and 9 rows in table ndb_struct_conf_na Saving 24 columns and 65 rows in table ndb_struct_na_base_pair Saving 43 columns and 59 rows in table ndb_struct_na_base_pair_step Saving 3 columns and 3 rows in table pdbx_entity_name Saving 3 columns and 1 rows in table software Saving 13 columns and 1 rows in table atom_sites Saving 11 columns and 1 rows in table citation Saving 2 columns and 1 rows in table computing Saving 2 columns and 3 rows in table database_2 Saving 6 columns and 6 rows in table entity Saving 3 columns and 424 rows in table entity_poly_seq Saving 6 columns and 6 rows in table entity_poly Saving 8 columns and 3 rows in table entity_src_nat Saving 10 columns and 424 rows in table pdbx_poly_seq_scheme Saving 8 columns and 1 rows in table refine_hist Saving 3 columns and 1 rows in table struct Saving 4 columns and 6 rows in table struct_asym Saving 4 columns and 6 rows in table struct_biol_gen Saving 17 columns and 11 rows in table struct_conf Saving 19 columns and 186 rows in table struct_conn Saving 2 columns and 1 rows in table struct_conn_type Saving 2 columns and 2 rows in table struct_sheet Saving 4 columns and 5 rows in table struct_sheet_order Saving 14 columns and 7 rows in table struct_sheet_range Saving 19 columns and 5 rows in table pdbx_struct_sheet_hbond Saving 1 columns and 5 rows in table atom_type Saving 6 columns and 24 rows in table chem_comp Saving 3 columns and 5 rows in table citation_author Saving 3 columns and 2 rows in table audit_conform Saving 3 columns and 1 rows in table audit Saving 2 columns and 1 rows in table pdbx_audit Saving 19 columns and 5576 rows in table atom_site /<>/pdbml-parser/test/1ysh.xml Tests execution time is 1 seconds. make[2]: Leaving directory '/<>/pdbml-parser' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with python2 dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' # lkajan: there is no real install mechanism in the upstream sources dh_auto_install --sourcedirectory=wrapper/python cd wrapper/python && python setup.py install --force --root=/<>/debian/tmp --no-compile -O0 --install-layout=deb running install running build running build_ext running install_lib creating /<>/debian/tmp creating /<>/debian/tmp/usr creating /<>/debian/tmp/usr/lib creating /<>/debian/tmp/usr/lib/python2.7 creating /<>/debian/tmp/usr/lib/python2.7/dist-packages copying build/lib.linux-ppc64le-2.7/CorePyWrap.so -> /<>/debian/tmp/usr/lib/python2.7/dist-packages running install_egg_info Writing /<>/debian/tmp/usr/lib/python2.7/dist-packages/python_corepywrap-1.000.egg-info dh override_dh_auto_install --with python2 make[1]: Leaving directory '/<>' dh_install -a debian/rules override_dh_installdocs make[1]: Entering directory '/<>' dh_installdocs find debian -name "*.md5" -delete make[1]: Leaving directory '/<>' dh_installchangelogs -a dh_installexamples -a dh_python2 -a W: dh_python2:479: Please add dh-python package to Build-Depends dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a debian/rules override_dh_makeshlibs make[1]: Entering directory '/<>' dh_makeshlibs -V make[1]: Leaving directory '/<>' dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package python-corepywrap: unused substitution variable ${python:Provides} dpkg-gencontrol: warning: package python-corepywrap: unused substitution variable ${python:Versions} dpkg-gencontrol: warning: package python-corepywrap: unused substitution variable ${python:Provides} dpkg-gencontrol: warning: package python-corepywrap: unused substitution variable ${python:Versions} dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 131 INFO: pkgstriptranslations version 131 INFO: pkgstriptranslations version 131 pkgstriptranslations: processing librcsb-core-wrapper0-dev (in debian/librcsb-core-wrapper0-dev); do_strip: , oemstrip: pkgstriptranslations: processing librcsb-core-wrapper0 (in debian/librcsb-core-wrapper0); do_strip: , oemstrip: pkgstriptranslations: processing python-corepywrap-dbgsym (in debian/.debhelper/python-corepywrap/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/librcsb-core-wrapper0/DEBIAN/control, package librcsb-core-wrapper0, directory debian/librcsb-core-wrapper0 pkgstripfiles: processing control file: debian/librcsb-core-wrapper0-dev/DEBIAN/control, package librcsb-core-wrapper0-dev, directory debian/librcsb-core-wrapper0-dev Searching for duplicated docs in dependency librcsb-core-wrapper0... pkgstripfiles: processing control file: debian/.debhelper/python-corepywrap/dbgsym-root/DEBIAN/control, package python-corepywrap-dbgsym, directory debian/.debhelper/python-corepywrap/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package librcsb-core-wrapper0 ... symlinking changelog.Debian.gz in librcsb-core-wrapper0-dev to file in librcsb-core-wrapper0 pkgstripfiles: No PNG files. pkgstripfiles: Running PNG optimization (using 4 cpus) for package python-corepywrap-dbgsym ... dpkg-deb: building package 'librcsb-core-wrapper0' in '../librcsb-core-wrapper0_1.005-5build1_ppc64el.deb'. pkgstripfiles: No PNG files. dpkg-deb: building package 'python-corepywrap-dbgsym' in 'debian/.debhelper/scratch-space/build-python-corepywrap/python-corepywrap-dbgsym_1.005-5build1_ppc64el.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package librcsb-core-wrapper0-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'librcsb-core-wrapper0-dev' in '../librcsb-core-wrapper0-dev_1.005-5build1_ppc64el.deb'. Renaming python-corepywrap-dbgsym_1.005-5build1_ppc64el.deb to python-corepywrap-dbgsym_1.005-5build1_ppc64el.ddeb INFO: pkgstriptranslations version 131 INFO: pkgstriptranslations version 131 pkgstriptranslations: processing python-corepywrap (in debian/python-corepywrap); do_strip: , oemstrip: pkgstriptranslations: processing librcsb-core-wrapper0-dbgsym (in debian/.debhelper/librcsb-core-wrapper0/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python-corepywrap/DEBIAN/control, package python-corepywrap, directory debian/python-corepywrap Searching for duplicated docs in dependency librcsb-core-wrapper0... pkgstripfiles: processing control file: debian/.debhelper/librcsb-core-wrapper0/dbgsym-root/DEBIAN/control, package librcsb-core-wrapper0-dbgsym, directory debian/.debhelper/librcsb-core-wrapper0/dbgsym-root symlinking changelog.Debian.gz in python-corepywrap to file in librcsb-core-wrapper0 pkgstripfiles: Running PNG optimization (using 4 cpus) for package librcsb-core-wrapper0-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'librcsb-core-wrapper0-dbgsym' in 'debian/.debhelper/scratch-space/build-librcsb-core-wrapper0/librcsb-core-wrapper0-dbgsym_1.005-5build1_ppc64el.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package python-corepywrap ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python-corepywrap' in '../python-corepywrap_1.005-5build1_ppc64el.deb'. Renaming librcsb-core-wrapper0-dbgsym_1.005-5build1_ppc64el.deb to librcsb-core-wrapper0-dbgsym_1.005-5build1_ppc64el.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../librcsb-core-wrapper_1.005-5build1_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build librcsb-core-wrapper-1.005 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20171116-1210 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ librcsb-core-wrapper_1.005-5build1_ppc64el.changes: --------------------------------------------------- Format: 1.8 Date: Thu, 16 Nov 2017 11:59:02 +0000 Source: librcsb-core-wrapper Binary: librcsb-core-wrapper0 librcsb-core-wrapper0-dev librcsb-core-wrapper-doc python-corepywrap Architecture: ppc64el Version: 1.005-5build1 Distribution: bionic-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: librcsb-core-wrapper-doc - documentation for librcsb-core-wrapper0 librcsb-core-wrapper0 - C++ library providing OO API to information in mmCIF format librcsb-core-wrapper0-dev - development files for librcsb-core-wrapper0 python-corepywrap - library that exports C++ mmCIF accessors to Python Changes: librcsb-core-wrapper (1.005-5build1) bionic; urgency=medium . * No-change rebuild for libxerces soname change. Checksums-Sha1: 333a68fc9bd13ca763064f8a2ee74c7a96474290 3390592 librcsb-core-wrapper0-dbgsym_1.005-5build1_ppc64el.ddeb 67b376f48e4695e392182a53bc8ffa41ed82f6e2 378524 librcsb-core-wrapper0-dev_1.005-5build1_ppc64el.deb bfb835ba9de2bdf000bdbd55e5f53063b44526cf 289944 librcsb-core-wrapper0_1.005-5build1_ppc64el.deb 22363efeed86cac6890f4e6d443a97309ebaf437 10214 librcsb-core-wrapper_1.005-5build1_ppc64el.buildinfo ea72f68ed837ac824bb6a86982a8f71498cf1126 3098432 python-corepywrap-dbgsym_1.005-5build1_ppc64el.ddeb b754a2fcd61c210c90a9f3e252f9424eeb8b86fe 202944 python-corepywrap_1.005-5build1_ppc64el.deb Checksums-Sha256: 6686cff64ad7d7e74ed51ec808a09e516c98e13a92e0e7afac8f91ccf2a36e2e 3390592 librcsb-core-wrapper0-dbgsym_1.005-5build1_ppc64el.ddeb 517e8ea3d4c307d4e1dbb825764cc60c83fbd8ad25750d83c59b44bafb7e4ee4 378524 librcsb-core-wrapper0-dev_1.005-5build1_ppc64el.deb 3cfce7067bd370a38292b925687fe08b0f1d8d4d63757bc218352d9ac69538d1 289944 librcsb-core-wrapper0_1.005-5build1_ppc64el.deb 9153f37e7c3242cfa0f7fc9d2f15ad4f807cefb03cae8047608b5c6c7eeacbae 10214 librcsb-core-wrapper_1.005-5build1_ppc64el.buildinfo 617df588646afc532c85e3a84cd395f39be123d9f57c32dc9f41e9f98d0af39b 3098432 python-corepywrap-dbgsym_1.005-5build1_ppc64el.ddeb 9e65ddea37a92e72f56c9e776f783171e06ee110a3cc2bd421b840e2f029a6bb 202944 python-corepywrap_1.005-5build1_ppc64el.deb Files: 8957673584ef53c3910ea28157c32e8f 3390592 debug optional librcsb-core-wrapper0-dbgsym_1.005-5build1_ppc64el.ddeb e19d7d887ade7f8a5db68f8df50b9bb9 378524 libdevel optional librcsb-core-wrapper0-dev_1.005-5build1_ppc64el.deb da4d7aba99dedc9a2dfdabc12a81d415 289944 libs optional librcsb-core-wrapper0_1.005-5build1_ppc64el.deb 6a19e841f9eeb7edf2b149adab375df5 10214 libs optional librcsb-core-wrapper_1.005-5build1_ppc64el.buildinfo 00a0fd57170aa2f0d41068d740499f72 3098432 debug optional python-corepywrap-dbgsym_1.005-5build1_ppc64el.ddeb ca2708156b36930c5ded72c6cef11c78 202944 python extra python-corepywrap_1.005-5build1_ppc64el.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ librcsb-core-wrapper0-dev_1.005-5build1_ppc64el.deb --------------------------------------------------- new debian package, version 2.0. size 378524 bytes: control archive=2068 bytes. 880 bytes, 20 lines control 3276 bytes, 50 lines md5sums Package: librcsb-core-wrapper0-dev Source: librcsb-core-wrapper Version: 1.005-5build1 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 2987 Depends: librcsb-core-wrapper0 (= 1.005-5build1) Suggests: librcsb-core-wrapper-doc Provides: librcsb-core-wrapper-dev Section: libdevel Priority: optional Homepage: http://sw-tools.rcsb.org/apps/CORE-WRAPPER/index.html Description: development files for librcsb-core-wrapper0 The RCSB Core Wrapper library was developed to provide an object-oriented application interface to information in mmCIF format. It includes several classes for accessing data dictionaries and mmCIF format data files. . This package contains files necessary for developing applications with the library. drwxr-xr-x root/root 0 2017-11-16 11:59 ./ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/include/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/include/rcsb/ -rw-r--r-- root/root 525 2017-11-16 11:59 ./usr/include/rcsb/BlockIO.h -rw-r--r-- root/root 3274 2017-11-16 11:59 ./usr/include/rcsb/CifCorrector.h -rw-r--r-- root/root 1756 2017-11-16 11:59 ./usr/include/rcsb/CifDataInfo.h -rw-r--r-- root/root 2398 2017-11-16 11:59 ./usr/include/rcsb/CifDefs.h -rw-r--r-- root/root 617 2017-11-16 11:59 ./usr/include/rcsb/CifExcept.h -rw-r--r-- root/root 22339 2017-11-16 11:59 ./usr/include/rcsb/CifFile.h -rw-r--r-- root/root 1518 2017-11-16 11:59 ./usr/include/rcsb/CifFileReadDef.h -rw-r--r-- root/root 1707 2017-11-16 11:59 ./usr/include/rcsb/CifFileUtil.h -rw-r--r-- root/root 1960 2017-11-16 11:59 ./usr/include/rcsb/CifParentChild.h -rw-r--r-- root/root 6387 2017-11-16 11:59 ./usr/include/rcsb/CifParserBase.h -rw-r--r-- root/root 898 2017-11-16 11:59 ./usr/include/rcsb/CifParserInt.h -rw-r--r-- root/root 1395 2017-11-16 11:59 ./usr/include/rcsb/CifScannerBase.h -rw-r--r-- root/root 750 2017-11-16 11:59 ./usr/include/rcsb/CifScannerInt.h -rw-r--r-- root/root 6737 2017-11-16 11:59 ./usr/include/rcsb/CifString.h -rw-r--r-- root/root 6964 2017-11-16 11:59 ./usr/include/rcsb/DICParserBase.h -rw-r--r-- root/root 1032 2017-11-16 11:59 ./usr/include/rcsb/DICParserInt.h -rw-r--r-- root/root 1476 2017-11-16 11:59 ./usr/include/rcsb/DICScannerBase.h -rw-r--r-- root/root 912 2017-11-16 11:59 ./usr/include/rcsb/DICScannerInt.h -rw-r--r-- root/root 2911 2017-11-16 11:59 ./usr/include/rcsb/DataInfo.h -rw-r--r-- root/root 5499 2017-11-16 11:59 ./usr/include/rcsb/DicFile.h -rw-r--r-- root/root 1447 2017-11-16 11:59 ./usr/include/rcsb/DictDataInfo.h -rw-r--r-- root/root 7746 2017-11-16 11:59 ./usr/include/rcsb/DictObjCont.h -rw-r--r-- root/root 4579 2017-11-16 11:59 ./usr/include/rcsb/DictObjContInfo.h -rw-r--r-- root/root 5617 2017-11-16 11:59 ./usr/include/rcsb/DictObjFile.h -rw-r--r-- root/root 896 2017-11-16 11:59 ./usr/include/rcsb/DictParentChild.h -rw-r--r-- root/root 3175 2017-11-16 11:59 ./usr/include/rcsb/Exceptions.h -rw-r--r-- root/root 547 2017-11-16 11:59 ./usr/include/rcsb/GenCont.h -rw-r--r-- root/root 5942 2017-11-16 11:59 ./usr/include/rcsb/GenString.h -rw-r--r-- root/root 52034 2017-11-16 11:59 ./usr/include/rcsb/ISTable.h -rw-r--r-- root/root 44543 2017-11-16 11:59 ./usr/include/rcsb/ITTable.h -rw-r--r-- root/root 2675 2017-11-16 11:59 ./usr/include/rcsb/ParentChild.h -rw-r--r-- root/root 258 2017-11-16 11:59 ./usr/include/rcsb/PdbMlFileUtil.h -rw-r--r-- root/root 2554 2017-11-16 11:59 ./usr/include/rcsb/PdbMlParserHandler.h -rw-r--r-- root/root 484 2017-11-16 11:59 ./usr/include/rcsb/RcsbFile.h -rw-r--r-- root/root 340 2017-11-16 11:59 ./usr/include/rcsb/RcsbPlatform.h -rw-r--r-- root/root 5674 2017-11-16 11:59 ./usr/include/rcsb/Serializer.h -rw-r--r-- root/root 20029 2017-11-16 11:59 ./usr/include/rcsb/TTable.h -rw-r--r-- root/root 1270 2017-11-16 11:59 ./usr/include/rcsb/TableError.h -rw-r--r-- root/root 21357 2017-11-16 11:59 ./usr/include/rcsb/TableFile.h -rw-r--r-- root/root 8696 2017-11-16 11:59 ./usr/include/rcsb/container_conversions.h -rw-r--r-- root/root 10685 2017-11-16 11:59 ./usr/include/rcsb/mapped_ptr_vector.C -rw-r--r-- root/root 2665 2017-11-16 11:59 ./usr/include/rcsb/mapped_ptr_vector.h -rw-r--r-- root/root 5764 2017-11-16 11:59 ./usr/include/rcsb/mapped_vector.C -rw-r--r-- root/root 1543 2017-11-16 11:59 ./usr/include/rcsb/mapped_vector.h -rw-r--r-- root/root 1232 2017-11-16 11:59 ./usr/include/rcsb/misc_util.h -rw-r--r-- root/root 210 2017-11-16 11:59 ./usr/include/rcsb/rcsb_math.h -rw-r--r-- root/root 617 2017-11-16 11:59 ./usr/include/rcsb/rcsb_types.h -rw-r--r-- root/root 1891 2017-11-16 11:59 ./usr/include/rcsb/regex.h drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/lib/ -rw-r--r-- root/root 2710466 2017-11-16 11:59 ./usr/lib/librcsb-core-wrapper.a lrwxrwxrwx root/root 0 2017-11-16 11:59 ./usr/lib/librcsb-core-wrapper.so -> librcsb-core-wrapper.so.0.0.1 drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/doc/librcsb-core-wrapper0-dev/ lrwxrwxrwx root/root 0 2017-11-16 11:59 ./usr/share/doc/librcsb-core-wrapper0-dev/changelog.Debian.gz -> ../librcsb-core-wrapper0/changelog.Debian.gz -rw-r--r-- root/root 27801 2017-11-07 16:13 ./usr/share/doc/librcsb-core-wrapper0-dev/copyright librcsb-core-wrapper0_1.005-5build1_ppc64el.deb ----------------------------------------------- new debian package, version 2.0. size 289944 bytes: control archive=1012 bytes. 808 bytes, 17 lines control 326 bytes, 4 lines md5sums 56 bytes, 1 lines shlibs 75 bytes, 2 lines triggers Package: librcsb-core-wrapper0 Source: librcsb-core-wrapper Version: 1.005-5build1 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1199 Depends: libc6 (>= 2.17), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), libxerces-c3.2 Section: libs Priority: optional Homepage: http://sw-tools.rcsb.org/apps/CORE-WRAPPER/index.html Description: C++ library providing OO API to information in mmCIF format The RCSB Core Wrapper library was developed to provide an object-oriented application interface to information in mmCIF format. It includes several classes for accessing data dictionaries and mmCIF format data files. . This package contains the shared library. drwxr-xr-x root/root 0 2017-11-16 11:59 ./ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/lib/ lrwxrwxrwx root/root 0 2017-11-16 11:59 ./usr/lib/librcsb-core-wrapper.so.0 -> librcsb-core-wrapper.so.0.0.1 -rw-r--r-- root/root 1184064 2017-11-16 11:59 ./usr/lib/librcsb-core-wrapper.so.0.0.1 drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/doc/librcsb-core-wrapper0/ -rw-r--r-- root/root 951 2017-11-16 11:59 ./usr/share/doc/librcsb-core-wrapper0/changelog.Debian.gz -rw-r--r-- root/root 27801 2017-11-07 16:13 ./usr/share/doc/librcsb-core-wrapper0/copyright drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/lintian/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 136 2017-11-07 16:13 ./usr/share/lintian/overrides/librcsb-core-wrapper0 python-corepywrap_1.005-5build1_ppc64el.deb ------------------------------------------- new debian package, version 2.0. size 202944 bytes: control archive=1044 bytes. 933 bytes, 18 lines control 527 bytes, 6 lines md5sums Package: python-corepywrap Source: librcsb-core-wrapper Version: 1.005-5build1 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1671 Depends: libboost-python1.65.1, libc6 (>= 2.17), libgcc1 (>= 1:3.0), librcsb-core-wrapper0 (= 1.005-5build1), libstdc++6 (>= 5.2), python (<< 2.8), python (>= 2.7) Suggests: librcsb-core-wrapper-doc Section: python Priority: extra Homepage: http://sw-tools.rcsb.org/apps/CORE-WRAPPER/index.html Description: library that exports C++ mmCIF accessors to Python The RCSB Core Wrapper library was developed to provide an object-oriented application interface to information in mmCIF format. It includes several classes for accessing data dictionaries and mmCIF format data files. . This library provides Python bindings for librcsb-core-wrapper. drwxr-xr-x root/root 0 2017-11-16 11:59 ./ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/lib/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/lib/python2.7/dist-packages/ -rw-r--r-- root/root 1662296 2017-11-16 11:59 ./usr/lib/python2.7/dist-packages/CorePyWrap.so -rw-r--r-- root/root 359 2017-11-16 11:59 ./usr/lib/python2.7/dist-packages/python_corepywrap-1.000.egg-info drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/doc/python-corepywrap/ -rw-r--r-- root/root 425 2017-11-07 16:13 ./usr/share/doc/python-corepywrap/README.Debian lrwxrwxrwx root/root 0 2017-11-16 11:59 ./usr/share/doc/python-corepywrap/changelog.Debian.gz -> ../librcsb-core-wrapper0/changelog.Debian.gz -rw-r--r-- root/root 27801 2017-11-07 16:13 ./usr/share/doc/python-corepywrap/copyright drwxr-xr-x root/root 0 2017-11-16 11:59 ./usr/share/doc/python-corepywrap/examples/ -rw-r--r-- root/root 2089 2013-10-21 12:54 ./usr/share/doc/python-corepywrap/examples/ChemCompReaderTests.py -rw-r--r-- root/root 2513 2013-10-21 12:54 ./usr/share/doc/python-corepywrap/examples/CorePyWrapTests.py +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build-Space: 509564 Build-Time: 147 Distribution: bionic-proposed Host Architecture: ppc64el Install-Time: 31 Job: librcsb-core-wrapper_1.005-5build1.dsc Machine Architecture: ppc64el Package: librcsb-core-wrapper Package-Time: 179 Source-Version: 1.005-5build1 Space: 509564 Status: successful Version: 1.005-5build1 -------------------------------------------------------------------------------- Finished at 20171116-1210 Build needed 00:02:59, 509564k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=bionic --arch=ppc64el PACKAGEBUILD-13737812 Scanning for processes to kill in build PACKAGEBUILD-13737812 RUN: /usr/share/launchpad-buildd/slavebin/in-target umount-chroot --backend=chroot --series=bionic --arch=ppc64el PACKAGEBUILD-13737812 Stopping target for build PACKAGEBUILD-13737812 RUN: /usr/share/launchpad-buildd/slavebin/in-target remove-build --backend=chroot --series=bionic --arch=ppc64el PACKAGEBUILD-13737812 Removing build PACKAGEBUILD-13737812