https://launchpad.net/ubuntu/+source/libgo-perl/0.15-7/+build/15630166 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-043 4.4.0-138-generic #164-Ubuntu SMP Tue Oct 2 17:16:02 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.5 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 9 Nov 10:45:43 ntpdate[1808]: adjust time server 10.211.37.1 offset 0.023737 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15630166 /home/buildd/filecache-default/b71572c9405b6ce6ff1d1ad001cf764bb07f52ae Creating target for build PACKAGEBUILD-15630166 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15630166 Starting target for build PACKAGEBUILD-15630166 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15630166 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-15630166 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15630166 Updating target for build PACKAGEBUILD-15630166 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [1018 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [513 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [8757 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5037 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 Packages [140 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [76.0 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 Packages [415 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [264 kB] Fetched 16.7 MB in 6s (2693 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libgdbm6 libperl5.28 perl-modules-5.28 The following packages will be upgraded: base-files binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-8 dash dmsetup findutils g++ g++-8 gcc gcc-8 gcc-8-base hostname init init-system-helpers libapparmor1 libasan5 libatomic1 libaudit-common libaudit1 libbinutils libcap-ng0 libcc1-0 libdb5.3 libdevmapper1.02.1 libgcc-8-dev libgcc1 libgdbm-compat4 libgomp1 libgpg-error0 libitm1 libkmod2 liblsan0 libmpx2 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsqlite3-0 libstdc++-8-dev libstdc++6 libsystemd0 libtsan0 libubsan1 libudev1 linux-libc-dev lockfile-progs perl perl-base sed systemd systemd-sysv tzdata 56 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 46.7 MB of archives. After this operation, 48.7 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 base-files amd64 10.1ubuntu8 [60.1 kB] Get:2 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dash amd64 0.5.10.2-1 [89.3 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 findutils amd64 4.6.0+git+20181018-1 [295 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main amd64 hostname amd64 3.21 [11.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 perl-modules-5.28 all 5.28.0-3 [2818 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main amd64 libgdbm6 amd64 1.18.1-1 [27.8 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main amd64 libgdbm-compat4 amd64 1.18.1-1 [6148 B] Get:8 http://ftpmaster.internal/ubuntu disco/main amd64 libperl5.28 amd64 5.28.0-3 [3804 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main amd64 perl amd64 5.28.0-3 [204 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 perl-base amd64 5.28.0-3 [1510 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libdb5.3 amd64 5.3.28+dfsg1-0.2 [672 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 sed amd64 4.5-2 [186 kB] Get:13 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 init-system-helpers all 1.55 [38.5 kB] Get:14 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 systemd-sysv amd64 239-7ubuntu10.1 [9404 B] Get:15 http://ftpmaster.internal/ubuntu disco/main amd64 libapparmor1 amd64 2.12-4ubuntu10 [29.9 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main amd64 libaudit-common all 1:2.8.3-1ubuntu3 [4068 B] Get:17 http://ftpmaster.internal/ubuntu disco/main amd64 libcap-ng0 amd64 0.7.9-1build1 [10.9 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main amd64 libaudit1 amd64 1:2.8.3-1ubuntu3 [38.8 kB] Get:19 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgpg-error0 amd64 1.32-3 [56.0 kB] Get:20 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libkmod2 amd64 25-1ubuntu1.1 [41.8 kB] Get:21 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 systemd amd64 239-7ubuntu10.1 [2968 kB] Get:22 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsystemd0 amd64 239-7ubuntu10.1 [211 kB] Get:23 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 init amd64 1.55 [6480 B] Get:24 http://ftpmaster.internal/ubuntu disco/main amd64 libquadmath0 amd64 8.2.0-9ubuntu1 [134 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main amd64 libubsan1 amd64 8.2.0-9ubuntu1 [121 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main amd64 libitm1 amd64 8.2.0-9ubuntu1 [28.1 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main amd64 libasan5 amd64 8.2.0-9ubuntu1 [364 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main amd64 gcc-8-base amd64 8.2.0-9ubuntu1 [18.6 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main amd64 libstdc++6 amd64 8.2.0-9ubuntu1 [399 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main amd64 libgomp1 amd64 8.2.0-9ubuntu1 [76.4 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 libatomic1 amd64 8.2.0-9ubuntu1 [9076 B] Get:32 http://ftpmaster.internal/ubuntu disco/main amd64 liblsan0 amd64 8.2.0-9ubuntu1 [132 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main amd64 libtsan0 amd64 8.2.0-9ubuntu1 [288 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main amd64 libmpx2 amd64 8.2.0-9ubuntu1 [11.7 kB] Get:35 http://ftpmaster.internal/ubuntu disco/main amd64 cpp-8 amd64 8.2.0-9ubuntu1 [7222 kB] Get:36 http://ftpmaster.internal/ubuntu disco/main amd64 libcc1-0 amd64 8.2.0-9ubuntu1 [39.5 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main amd64 gcc-8 amd64 8.2.0-9ubuntu1 [7999 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main amd64 g++-8 amd64 8.2.0-9ubuntu1 [8115 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main amd64 libstdc++-8-dev amd64 8.2.0-9ubuntu1 [1538 kB] Get:40 http://ftpmaster.internal/ubuntu disco/main amd64 libgcc-8-dev amd64 8.2.0-9ubuntu1 [2304 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main amd64 libgcc1 amd64 1:8.2.0-9ubuntu1 [40.7 kB] Get:42 http://ftpmaster.internal/ubuntu disco/main amd64 libbinutils amd64 2.31.1-7ubuntu1 [483 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-common amd64 2.31.1-7ubuntu1 [194 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 binutils amd64 2.31.1-7ubuntu1 [3392 B] Get:45 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-7ubuntu1 [1829 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main amd64 libselinux1 amd64 2.8-1build2 [68.6 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage-common all 2.8-1build2 [6892 B] Get:48 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage1 amd64 2.8-1build2 [85.1 kB] Get:49 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libudev1 amd64 239-7ubuntu10.1 [53.9 kB] Get:50 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libseccomp2 amd64 2.3.3-3ubuntu2 [38.9 kB] Get:51 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libdevmapper1.02.1 amd64 2:1.02.145-4.1ubuntu4 [127 kB] Get:52 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dmsetup amd64 2:1.02.145-4.1ubuntu4 [74.6 kB] Get:53 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsqlite3-0 amd64 3.25.3-1 [529 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 tzdata all 2018g-1 [188 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 g++ amd64 4:8.2.0-2ubuntu2 [1608 B] Get:56 http://ftpmaster.internal/ubuntu disco/main amd64 gcc amd64 4:8.2.0-2ubuntu2 [5224 B] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 cpp amd64 4:8.2.0-2ubuntu2 [27.6 kB] Get:58 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 linux-libc-dev amd64 4.18.0-11.12 [1039 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main amd64 lockfile-progs amd64 0.1.18 [9872 B] debconf: delaying package configuration, since apt-utils is not 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Universal Time is now: Fri Nov 9 10:46:29 UTC 2018. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up init (1.55) ... Setting up libtsan0:amd64 (8.2.0-9ubuntu1) ... Setting up linux-libc-dev:amd64 (4.18.0-11.12) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.145-4.1ubuntu4) ... Setting up liblsan0:amd64 (8.2.0-9ubuntu1) ... Setting up libgdbm6:amd64 (1.18.1-1) ... Setting up binutils-common:amd64 (2.31.1-7ubuntu1) ... Setting up libmpx2:amd64 (8.2.0-9ubuntu1) ... Setting up perl-modules-5.28 (5.28.0-3) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up libsqlite3-0:amd64 (3.25.3-1) ... Setting up dmsetup (2:1.02.145-4.1ubuntu4) ... Setting up libgdbm-compat4:amd64 (1.18.1-1) ... Setting up lockfile-progs (0.1.18) ... Setting up libasan5:amd64 (8.2.0-9ubuntu1) ... Setting up libitm1:amd64 (8.2.0-9ubuntu1) ... Setting up libubsan1:amd64 (8.2.0-9ubuntu1) ... Setting up libbinutils:amd64 (2.31.1-7ubuntu1) ... Setting up libperl5.28:amd64 (5.28.0-3) ... Setting up perl (5.28.0-3) ... Setting up libgcc-8-dev:amd64 (8.2.0-9ubuntu1) ... Setting up binutils-x86-64-linux-gnu (2.31.1-7ubuntu1) ... Setting up libstdc++-8-dev:amd64 (8.2.0-9ubuntu1) ... Setting up binutils (2.31.1-7ubuntu1) ... Setting up gcc-8 (8.2.0-9ubuntu1) ... Setting up g++-8 (8.2.0-9ubuntu1) ... Setting up gcc (4:8.2.0-2ubuntu2) ... Setting up g++ (4:8.2.0-2ubuntu2) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-15630166 amd64 disco-proposed -c chroot:build-PACKAGEBUILD-15630166 --arch=amd64 --dist=disco-proposed --nolog -A libgo-perl_0.15-7.dsc Initiating build PACKAGEBUILD-15630166 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-138-generic #164-Ubuntu SMP Tue Oct 2 17:16:02 UTC 2018 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-043.buildd +==============================================================================+ | libgo-perl 0.15-7 (amd64) 09 Nov 2018 10:46 | +==============================================================================+ Package: libgo-perl Version: 0.15-7 Source Version: 0.15-7 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/libgo-perl-t7assx/libgo-perl-0.15' with '<>' I: NOTICE: Log filtering will replace 'build/libgo-perl-t7assx' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-15630166/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- libgo-perl_0.15-7.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-efYwQ6/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-efYwQ6/apt_archive ./ InRelease Get:2 copy:/<>/resolver-efYwQ6/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-efYwQ6/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-efYwQ6/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-efYwQ6/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (119 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-efYwQ6/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14539 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11~), perl, libdata-stag-perl, libxml-libxslt-perl, libxml-writer-perl, libxml-checker-perl, xsltproc, libbio-perl-perl, rename Filtered Build-Depends: debhelper (>= 11~), perl, libdata-stag-perl, libxml-libxslt-perl, libxml-writer-perl, libxml-checker-perl, xsltproc, libbio-perl-perl, rename dpkg-deb: building package 'sbuild-build-depends-libgo-perl-dummy' in '/<>/resolver-gp8W9X/apt_archive/sbuild-build-depends-libgo-perl-dummy.deb'. Ign:1 copy:/<>/resolver-gp8W9X/apt_archive ./ InRelease Get:2 copy:/<>/resolver-gp8W9X/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-gp8W9X/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-gp8W9X/apt_archive ./ Sources [273 B] Get:5 copy:/<>/resolver-gp8W9X/apt_archive ./ Packages [588 B] Fetched 2980 B in 0s (102 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install libgo-perl build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbio-perl-perl libbsd0 libcroco3 libdata-stag-perl libelf1 libencode-locale-perl libexpat1 libfile-listing-perl libfile-stripnondeterminism-perl libglib2.0-0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu60 libio-html-perl libio-socket-ssl-perl libio-string-perl liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libnet-http-perl libnet-ssleay-perl libpipeline1 libsigsegv2 libtimedate-perl libtool libtry-tiny-perl liburi-perl libwww-perl libwww-robotrules-perl libxml-checker-perl libxml-dom-perl libxml-libxml-perl libxml-libxslt-perl libxml-namespacesupport-perl libxml-parser-perl libxml-perl libxml-regexp-perl libxml-sax-base-perl libxml-sax-perl libxml-writer-perl libxml2 libxslt1.1 m4 man-db netbase perl-openssl-defaults po-debconf rename ucf xsltproc Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff bioperl libxml-sax-expatxs-perl libdata-dump-perl libcrypt-ssleay-perl libtool-doc gfortran | fortran95-compiler gcj-jdk libauthen-ntlm-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bioperl-run | libbio-perl-run-perl libace-perl libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl libclone-perl libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl libdbd-pg-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-tableextract-perl liblist-moreutils-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl libxml-dom-xpath-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl perl-tk libgd-gd2-perl | libgd-gd2-noxpm-perl libmldbm-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libhtml-format-perl libltdl-dev libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbio-perl-perl libbsd0 libcroco3 libdata-stag-perl libelf1 libencode-locale-perl libexpat1 libfile-listing-perl libfile-stripnondeterminism-perl libglib2.0-0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu60 libio-html-perl libio-socket-ssl-perl libio-string-perl liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libnet-http-perl libnet-ssleay-perl libpipeline1 libsigsegv2 libtimedate-perl libtool libtry-tiny-perl liburi-perl libwww-perl libwww-robotrules-perl libxml-checker-perl libxml-dom-perl libxml-libxml-perl libxml-libxslt-perl libxml-namespacesupport-perl libxml-parser-perl libxml-perl libxml-regexp-perl libxml-sax-base-perl libxml-sax-perl libxml-writer-perl libxml2 libxslt1.1 m4 man-db netbase perl-openssl-defaults po-debconf rename sbuild-build-depends-libgo-perl-dummy ucf xsltproc 0 upgraded, 72 newly installed, 0 to remove and 0 not upgraded. Need to get 24.2 MB of archives. After this operation, 87.7 MB of additional disk space will be used. 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[15.5 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main amd64 xsltproc amd64 1.1.32-2 [14.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 24.2 MB in 1s (27.3 MB/s) Selecting previously unselected package libbsd0:amd64. 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Setting up libio-html-perl (1.001-1) ... Setting up gettext-base (0.19.8.1-8) ... Setting up libpipeline1:amd64 (1.5.0-2) ... Setting up m4 (1.4.18-1ubuntu1) ... Setting up libbsd0:amd64 (0.9.1-1) ... Setting up ucf (3.0038) ... Setting up libxml-writer-perl (0.625-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7ubuntu2) ... Setting up libmagic-mgc (1:5.34-2) ... Setting up libmagic1:amd64 (1:5.34-2) ... Setting up libcroco3:amd64 (0.6.12-2) ... Setting up libxslt1.1:amd64 (1.1.32-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up liblwp-mediatypes-perl (6.02-1) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up dwz (0.12-2) ... Setting up libxml-regexp-perl (0.04-1) ... Setting up autotools-dev (20180224.1) ... Setting up liburi-perl (1.74-1) ... Setting up libhtml-parser-perl (3.72-3build2) ... Setting up libio-string-perl (1.08-3) ... Setting up libnet-http-perl (6.18-1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdata-stag-perl (0.14-2) ... Setting up autopoint (0.19.8.1-8) ... Setting up netbase (5.4) ... Setting up libfile-stripnondeterminism-perl (0.044-1) ... Setting up libxml-sax-perl (1.00+dfsg-1.1~build1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libhttp-date-perl (6.02-1) ... Setting up libbio-perl-perl (1.7.2-3) ... Setting up gettext (0.19.8.1-8) ... Setting up libnet-ssleay-perl (1.85-2ubuntu3) ... Setting up xsltproc (1.1.32-2) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.34-2) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up libhtml-tree-perl (5.07-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-listing-perl (6.04-1) ... Setting up man-db (2.8.4-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libhttp-message-perl (6.18-1) ... Setting up libxml-libxml-perl (2.0132+dfsg-2build1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libtool (2.4.6-6) ... Setting up po-debconf (1.0.20) ... Setting up libhttp-cookies-perl (6.04-1) ... Setting up libxml-libxslt-perl (1.96-1build1) ... Setting up dh-autoreconf (19) ... Setting up liblwp-protocol-https-perl (6.07-2) ... Setting up dh-strip-nondeterminism (0.044-1) ... Setting up libwww-perl (6.36-1) ... Setting up debhelper (11.3.2ubuntu1) ... Setting up libxml-parser-perl (2.44-2build4) ... Setting up libxml-perl (0.08-3) ... Setting up libxml-dom-perl (1.44-2) ... Setting up libxml-checker-perl (0.13-6) ... Setting up sbuild-build-depends-libgo-perl-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-138-generic amd64 (x86_64) Toolchain package versions: binutils_2.31.1-7ubuntu1 dpkg-dev_1.19.0.5ubuntu5 g++-8_8.2.0-9ubuntu1 gcc-8_8.2.0-9ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-9ubuntu1 libstdc++6_8.2.0-9ubuntu1 linux-libc-dev_4.18.0-11.12 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.7.0 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-8 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_4.4.18-2ubuntu3 binutils_2.31.1-7ubuntu1 binutils-common_2.31.1-7ubuntu1 binutils-x86-64-linux-gnu_2.31.1-7ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu2 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 coreutils_8.28-1ubuntu2 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-9ubuntu1 dash_0.5.10.2-1 debconf_1.5.69 debhelper_11.3.2ubuntu1 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_0.044-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.0.5ubuntu5 dpkg-dev_1.19.0.5ubuntu5 dwz_0.12-2 e2fslibs_1.44.4-2 e2fsprogs_1.44.4-2 fakeroot_1.22-2ubuntu1 fdisk_2.32-0.1ubuntu2 file_1:5.34-2 findutils_4.6.0+git+20181018-1 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-9ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-9ubuntu1 gcc-8-base_8.2.0-9ubuntu1 gettext_0.19.8.1-8 gettext-base_0.19.8.1-8 gpg_2.2.8-3ubuntu1 gpg-agent_2.2.8-3ubuntu1 gpgconf_2.2.8-3ubuntu1 gpgv_2.2.8-3ubuntu1 grep_3.1-2ubuntu1 groff-base_1.22.3-10 gzip_1.6-5ubuntu2 hostname_3.21 init_1.55 init-system-helpers_1.55 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.12-4ubuntu10 libapt-pkg5.0_1.7.0 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-9ubuntu1 libassuan0_2.5.1-2 libatomic1_8.2.0-9ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.3-1ubuntu3 libaudit1_1:2.8.3-1ubuntu3 libbinutils_2.31.1-7ubuntu1 libbio-perl-perl_1.7.2-3 libblkid1_2.32-0.1ubuntu2 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-0ubuntu1 libc-dev-bin_2.28-0ubuntu1 libc6_2.28-0ubuntu1 libc6-dev_2.28-0ubuntu1 libcap-ng0_0.7.9-1build1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-9ubuntu1 libcom-err2_1.44.4-2 libcomerr2_1.44.4-2 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.4-2ubuntu2 libdata-stag-perl_0.14-2 libdb5.3_5.3.28+dfsg1-0.2 libdebconfclient0_0.244ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu4 libdpkg-perl_1.19.0.5ubuntu5 libelf1_0.170-0.5.0ubuntu1 libencode-locale-perl_1.05-1 libexpat1_2.2.6-1 libext2fs2_1.44.4-2 libfakeroot_1.22-2ubuntu1 libfdisk1_2.32-0.1ubuntu2 libffi6_3.2.1-8 libfile-listing-perl_6.04-1 libfile-stripnondeterminism-perl_0.044-1 libgcc-8-dev_8.2.0-9ubuntu1 libgcc1_1:8.2.0-9ubuntu1 libgcrypt20_1.8.3-1ubuntu1 libgdbm-compat4_1.18.1-1 libgdbm5_1.14.1-6 libgdbm6_1.18.1-1 libglib2.0-0_2.58.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.6.4-2ubuntu1 libgomp1_8.2.0-9ubuntu1 libgpg-error0_1.32-3 libhogweed4_3.4-1 libhtml-parser-perl_3.72-3build2 libhtml-tagset-perl_3.20-3 libhtml-tree-perl_5.07-1 libhttp-cookies-perl_6.04-1 libhttp-date-perl_6.02-1 libhttp-message-perl_6.18-1 libhttp-negotiate-perl_6.01-1 libicu60_60.2-6ubuntu1 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.5-1 libio-html-perl_1.001-1 libio-socket-ssl-perl_2.060-3 libio-string-perl_1.08-3 libip4tc0_1.6.1-2ubuntu2 libisl19_0.20-2 libitm1_8.2.0-9ubuntu1 libjson-c3_0.12.1-1.3 libkmod2_25-1ubuntu1.1 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblsan0_8.2.0-9ubuntu1 liblwp-mediatypes-perl_6.02-1 liblwp-protocol-https-perl_6.07-2 liblz4-1_1.8.2-1ubuntu1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount1_2.32-0.1ubuntu2 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libmpx2_8.2.0-9ubuntu1 libncurses6_6.1+20180210-4ubuntu1 libncursesw6_6.1+20180210-4ubuntu1 libnet-http-perl_6.18-1 libnet-ssleay-perl_1.85-2ubuntu3 libnettle6_3.4-1 libnpth0_1.6-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.6ubuntu2 libpam-modules-bin_1.1.8-3.6ubuntu2 libpam-runtime_1.1.8-3.6ubuntu2 libpam0g_1.1.8-3.6ubuntu2 libpcre3_2:8.39-11 libperl5.26_5.26.2-7 libperl5.28_5.28.0-3 libpipeline1_1.5.0-2 libpng16-16_1.6.34-2 libprocps7_2:3.3.15-2ubuntu1 libquadmath0_8.2.0-9ubuntu1 libreadline7_7.0-5 libseccomp2_2.3.3-3ubuntu2 libselinux1_2.8-1build2 libsemanage-common_2.8-1build2 libsemanage1_2.8-1build2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsmartcols1_2.32-0.1ubuntu2 libsqlite3-0_3.25.3-1 libss2_1.44.4-2 libssl1.1_1.1.1-1ubuntu2 libstdc++-8-dev_8.2.0-9ubuntu1 libstdc++6_8.2.0-9ubuntu1 libsystemd0_239-7ubuntu10.1 libtasn1-6_4.13-3 libtimedate-perl_2.3000-2 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-6 libtry-tiny-perl_0.30-1 libtsan0_8.2.0-9ubuntu1 libubsan1_8.2.0-9ubuntu1 libudev1_239-7ubuntu10.1 libunistring2_0.9.10-1ubuntu1 liburi-perl_1.74-1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.32-0.1ubuntu2 libwww-perl_6.36-1 libwww-robotrules-perl_6.02-1 libxml-checker-perl_0.13-6 libxml-dom-perl_1.44-2 libxml-libxml-perl_2.0132+dfsg-2build1 libxml-libxslt-perl_1.96-1build1 libxml-namespacesupport-perl_1.12-1 libxml-parser-perl_2.44-2build4 libxml-perl_0.08-3 libxml-regexp-perl_0.04-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1.1~build1 libxml-writer-perl_0.625-1 libxml2_2.9.4+dfsg1-7ubuntu2 libxslt1.1_1.1.32-2 libzstd1_1.3.5+dfsg-1ubuntu1 linux-libc-dev_4.18.0-11.12 lockfile-progs_0.1.18 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-1ubuntu1 make_4.2.1-1.2 man-db_2.8.4-3 mawk_1.3.3-17ubuntu3 mount_2.32-0.1ubuntu2 multiarch-support_2.28-0ubuntu1 ncurses-base_6.1+20180210-4ubuntu1 ncurses-bin_6.1+20180210-4ubuntu1 netbase_5.4 openssl_1.1.1-1ubuntu2 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-3 perl_5.28.0-3 perl-base_5.28.0-3 perl-modules-5.26_5.26.2-7 perl-modules-5.28_5.28.0-3 perl-openssl-defaults_3build1 pinentry-curses_1.1.0-1build2 pkgbinarymangler_143 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 readline-common_7.0-5 rename_1.00-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libgo-perl-dummy_0.invalid.0 sed_4.5-2 sensible-utils_0.0.12 systemd_239-7ubuntu10.1 systemd-sysv_239-7ubuntu10.1 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-2 tzdata_2018g-1 ubuntu-keyring_2018.09.18.1 ucf_3.0038 util-linux_2.32-0.1ubuntu2 xsltproc_1.1.32-2 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Oct 25 14:52:04 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libgo-perl_0.15-7.dsc dpkg-source: info: extracting libgo-perl in libgo-perl-0.15 dpkg-source: info: unpacking libgo-perl_0.15.orig.tar.gz dpkg-source: info: unpacking libgo-perl_0.15-7.debian.tar.xz dpkg-source: info: applying fix-whatis-entries.patch dpkg-source: info: applying fix-missing-manpages dpkg-source: info: applying fix-pod.patch dpkg-source: info: applying fix_test_xsltproc dpkg-source: info: applying fix_hash_in_go_io_dotty.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying spelling2.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-15630166 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-15630166 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-15630166 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package libgo-perl dpkg-buildpackage: info: source version 0.15-7 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build libgo-perl-0.15 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for GO Writing MYMETA.yml and MYMETA.json dh_auto_build make -j4 make[1]: Entering directory '/<>' cp GO/IO/Analysis.pm blib/lib/GO/IO/Analysis.pm cp GO/Handlers/xsl_base.pm blib/lib/GO/Handlers/xsl_base.pm cp GO/IO/Dotty.pm blib/lib/GO/IO/Dotty.pm cp GO/Model/DB.pm blib/lib/GO/Model/DB.pm cp GO/Handlers/go_ont.pm blib/lib/GO/Handlers/go_ont.pm cp GO/Handlers/prolog.pm blib/lib/GO/Handlers/prolog.pm cp GO/Handlers/owl_to_obo_text.pm blib/lib/GO/Handlers/owl_to_obo_text.pm cp GO/IO/ObanOwl.pm blib/lib/GO/IO/ObanOwl.pm cp GO/Handlers/godb_prestore.pm blib/lib/GO/Handlers/godb_prestore.pm cp GO/Handlers/obo_html.pm blib/lib/GO/Handlers/obo_html.pm cp GO/Metadata/Panther.pm blib/lib/GO/Metadata/Panther.pm cp GO/Handlers/abstract_prolog_writer.pm blib/lib/GO/Handlers/abstract_prolog_writer.pm cp GO/Model/CrossProduct.pm blib/lib/GO/Model/CrossProduct.pm cp GO/Handlers/obo_text.pm blib/lib/GO/Handlers/obo_text.pm cp GO/Handlers/owl.pm blib/lib/GO/Handlers/owl.pm cp GO/Handlers/base.pm blib/lib/GO/Handlers/base.pm cp GO/Handlers/obo_godb_flat.pm blib/lib/GO/Handlers/obo_godb_flat.pm cp GO/Handlers/tbl.pm blib/lib/GO/Handlers/tbl.pm cp GO/Handlers/rdf.pm blib/lib/GO/Handlers/rdf.pm cp GO/Handlers/abstract_sql_writer.pm blib/lib/GO/Handlers/abstract_sql_writer.pm cp GO/Handlers/obj_yaml.pm blib/lib/GO/Handlers/obj_yaml.pm cp GO/Handlers/xml.pm blib/lib/GO/Handlers/xml.pm cp GO/Handlers/lexanalysis2sql.pm blib/lib/GO/Handlers/lexanalysis2sql.pm cp GO/IO/OBDXML.pm blib/lib/GO/IO/OBDXML.pm cp GO/Handlers/pathlist.pm blib/lib/GO/Handlers/pathlist.pm cp GO/Handlers/text_html.pm blib/lib/GO/Handlers/text_html.pm cp GO/Handlers/lexanalysis.pm blib/lib/GO/Handlers/lexanalysis.pm cp GO/Handlers/obj.pm blib/lib/GO/Handlers/obj.pm cp GO/Handlers/summary.pm blib/lib/GO/Handlers/summary.pm cp GO/Handlers/obo_sxpr.pm blib/lib/GO/Handlers/obo_sxpr.pm cp GO/Handlers/obo_xml.pm blib/lib/GO/Handlers/obo_xml.pm cp GO/Model/Association.pm blib/lib/GO/Model/Association.pm cp GO/Basic.pm blib/lib/GO/Basic.pm cp GO/Handlers/obj_storable.pm blib/lib/GO/Handlers/obj_storable.pm cp GO/IO/XML.pm blib/lib/GO/IO/XML.pm cp GO/IO/go_assoc.pm blib/lib/GO/IO/go_assoc.pm cp GO/IO/RDFXML.pm blib/lib/GO/IO/RDFXML.pm cp GO/Handlers/sxpr.pm blib/lib/GO/Handlers/sxpr.pm cp GO/Handlers/go_xref.pm blib/lib/GO/Handlers/go_xref.pm cp GO/Handlers/go_def.pm blib/lib/GO/Handlers/go_def.pm cp GO/Handlers/obo.pm blib/lib/GO/Handlers/obo.pm cp GO/IO/Blast.pm blib/lib/GO/IO/Blast.pm cp GO/Parsers/obo_parser.pm blib/lib/GO/Parsers/obo_parser.pm cp GO/Parsers/go_ids_parser.pm blib/lib/GO/Parsers/go_ids_parser.pm cp GO/Parsers/go_ont_parser.pm blib/lib/GO/Parsers/go_ont_parser.pm cp GO/Parsers/go_def_parser.pm blib/lib/GO/Parsers/go_def_parser.pm cp GO/Parsers/base_parser.pm blib/lib/GO/Parsers/base_parser.pm cp GO/Parsers/locuslink_parser.pm blib/lib/GO/Parsers/locuslink_parser.pm cp GO/Parsers/ncbi_taxonomy_parser.pm blib/lib/GO/Parsers/ncbi_taxonomy_parser.pm cp GO/Model/Evidence.pm blib/lib/GO/Model/Evidence.pm cp GO/Model/Property.pm blib/lib/GO/Model/Property.pm cp GO/Parsers/generic_tagval_parser.pm blib/lib/GO/Parsers/generic_tagval_parser.pm cp GO/Model/Relationship.pm blib/lib/GO/Model/Relationship.pm cp GO/Parsers/obj_emitter.pm blib/lib/GO/Parsers/obj_emitter.pm cp GO/Parsers/mgi_assoc_parser.pm blib/lib/GO/Parsers/mgi_assoc_parser.pm cp GO/Model/Term.pm blib/lib/GO/Model/Term.pm cp GO/Model/GraphIterator.pm blib/lib/GO/Model/GraphIterator.pm cp GO/Parsers/go_xref_parser.pm blib/lib/GO/Parsers/go_xref_parser.pm cp GO/Model/LogicalDefinition.pm blib/lib/GO/Model/LogicalDefinition.pm cp GO/Model/Xref.pm blib/lib/GO/Model/Xref.pm cp GO/Model/TreeIterator.pm blib/lib/GO/Model/TreeIterator.pm cp GO/Model/Path.pm blib/lib/GO/Model/Path.pm cp GO/Parsers/obj_storable_parser.pm blib/lib/GO/Parsers/obj_storable_parser.pm cp GO/Model/Seq.pm blib/lib/GO/Model/Seq.pm cp GO/Parsers/obo_text_parser.pm blib/lib/GO/Parsers/obo_text_parser.pm cp GO/Model/Root.pm blib/lib/GO/Model/Root.pm cp GO/Parsers/ParserEventNames.pm blib/lib/GO/Parsers/ParserEventNames.pm cp GO/Model/Modification.pm blib/lib/GO/Model/Modification.pm cp GO/Model/GeneProduct.pm blib/lib/GO/Model/GeneProduct.pm cp GO/Parsers/go_assoc_parser.pm blib/lib/GO/Parsers/go_assoc_parser.pm cp GO/Parsers/obj_yaml_parser.pm blib/lib/GO/Parsers/obj_yaml_parser.pm cp GO/Model/GraphNodeInstance.pm blib/lib/GO/Model/GraphNodeInstance.pm cp GO/Model/Graph.pm blib/lib/GO/Model/Graph.pm cp GO/Parser.pm blib/lib/GO/Parser.pm cp GO/Parsers/mesh_parser.pm blib/lib/GO/Parsers/mesh_parser.pm cp GO/ObjFactory.pm blib/lib/GO/ObjFactory.pm cp GO/ObjCache.pm blib/lib/GO/ObjCache.pm cp GO/Model/Restriction.pm blib/lib/GO/Model/Restriction.pm cp GO/Parsers/ncbi_taxon_names_parser.pm blib/lib/GO/Parsers/ncbi_taxon_names_parser.pm cp GO/Model/Ontology.pm blib/lib/GO/Model/Ontology.pm cp GO/Model/Species.pm blib/lib/GO/Model/Species.pm cp GO/xsl/oboxml_to_racer.xsl blib/lib/GO/xsl/oboxml_to_racer.xsl cp GO/xsl/oboxml_to_summary_table.xsl blib/lib/GO/xsl/oboxml_to_summary_table.xsl cp GO/xsl/oboxml_to_owl.xsl blib/lib/GO/xsl/oboxml_to_owl.xsl cp GO/Parsers/owl_parser.pm blib/lib/GO/Parsers/owl_parser.pm cp GO/xsl/oboxml_to_simple_owl.xsl blib/lib/GO/xsl/oboxml_to_simple_owl.xsl cp GO/xsl/text_html.xsl blib/lib/GO/xsl/text_html.xsl cp go-perl.pod blib/lib/go-perl.pod cp GO/xsl/oboxml_to_obd_prestore.xsl blib/lib/GO/xsl/oboxml_to_obd_prestore.xsl cp GO/xsl/owl_to_oboxml.xsl blib/lib/GO/xsl/owl_to_oboxml.xsl cp GO/xsl/oboxml_to_chadoxml.xsl blib/lib/GO/xsl/oboxml_to_chadoxml.xsl cp GO/Parsers/xrf_abbs_parser.pm blib/lib/GO/Parsers/xrf_abbs_parser.pm cp GO/xsl/chadoxml_to_oboxml.xsl blib/lib/GO/xsl/chadoxml_to_oboxml.xsl cp GO/Parsers/unknown_format_parser.pm blib/lib/GO/Parsers/unknown_format_parser.pm cp GO/Parsers/refgenomes_parser.pm blib/lib/GO/Parsers/refgenomes_parser.pm cp GO/xsl/oboxml_to_obotext.xsl blib/lib/GO/xsl/oboxml_to_obotext.xsl cp GO/xsl/oboxml_to_dig.xsl blib/lib/GO/xsl/oboxml_to_dig.xsl cp GO/xsl/ipr_to_oboxml.xsl blib/lib/GO/xsl/ipr_to_oboxml.xsl cp GO/xsl/oboxml_filter.xsl blib/lib/GO/xsl/oboxml_filter.xsl cp GO/xsl/oboxml_to_godb_prestore.xsl blib/lib/GO/xsl/oboxml_to_godb_prestore.xsl cp GO/Parsers/references_parser.pm blib/lib/GO/Parsers/references_parser.pm cp GO/Utils.pm blib/lib/GO/Utils.pm cp GO/Parsers/obo_xml_parser.pm blib/lib/GO/Parsers/obo_xml_parser.pm cp scripts/go-apply-xslt blib/script/go-apply-xslt cp scripts/go-dag-summary.pl blib/script/go-dag-summary.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go-apply-xslt "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go-dag-summary.pl cp scripts/go-export-graph.pl blib/script/go-export-graph.pl cp scripts/go-export-prolog.pl blib/script/go-export-prolog.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go-export-graph.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go-export-prolog.pl cp scripts/go-filter-subset.pl blib/script/go-filter-subset.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go-filter-subset.pl cp scripts/go-show-assocs-by-node.pl blib/script/go-show-assocs-by-node.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go-show-assocs-by-node.pl cp scripts/go-show-paths-to-root.pl blib/script/go-show-paths-to-root.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go-show-paths-to-root.pl cp scripts/go2chadoxml blib/script/go2chadoxml "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2chadoxml cp scripts/go2fmt.pl blib/script/go2fmt.pl cp scripts/go2error_report blib/script/go2error_report "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2fmt.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2error_report cp scripts/go2godb_prestore blib/script/go2godb_prestore "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2godb_prestore cp scripts/go2obo blib/script/go2obo "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2obo cp scripts/go2obo_html blib/script/go2obo_html "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2obo_html cp scripts/go2obo_text blib/script/go2obo_text cp scripts/go2obo_xml blib/script/go2obo_xml "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2obo_text "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2obo_xml cp scripts/go2owl blib/script/go2owl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2owl cp scripts/go2pathlist blib/script/go2pathlist "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2pathlist cp scripts/go2prolog blib/script/go2prolog "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2prolog cp scripts/go2rdf blib/script/go2rdf "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2rdf cp scripts/go2rdfxml blib/script/go2rdfxml "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2rdfxml cp scripts/go2summary blib/script/go2summary "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2summary cp scripts/go2sxpr blib/script/go2sxpr "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2sxpr cp scripts/go2tbl blib/script/go2tbl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2tbl cp scripts/go2text_html blib/script/go2text_html "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2text_html cp scripts/go2xml blib/script/go2xml "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/go2xml cp scripts/map2slim blib/script/map2slim "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/map2slim Manifying 10 pod documents Manifying 38 pod documents Manifying 33 pod documents make[1]: Leaving directory '/<>' dh_auto_test make -j4 test TEST_VERBOSE=1 make[1]: Entering directory '/<>' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/t010build.t ............ 1..6 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:05 2018 # Current time GMT: Fri Nov 9 10:47:05 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok t/t020paths.t ............ 1..7 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:05 2018 # Current time GMT: Fri Nov 9 10:47:05 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok t/t030detecterror.t ...... 1..4 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:05 2018 # Current time GMT: Fri Nov 9 10:47:05 2018 # Using Test.pm version 1.31 ok 1 ok 2 '(error (message "\"synonym:krebs cycle\" doesn't look valid") (file "./t/data/test_bad_function.dat") (line " %high-potential iron-sulfur carrier ; synonym:krebs cycle" ) (line_no "6") (parse_class "GO::Parsers::go_ont_parser")) '(error (message "clash on GO:0015000; was 'obsolete' now 'not-polyferredoxin'" ) (file "./t/data/test_bad_function.dat") (line "%not-polyferredoxin ; GO:0015000") (line_no "8") (parse_class "GO::Parsers::go_ont_parser")) ok 3 '(error (message "\"synonym:krebs cycle\" doesn't look valid") (file "./t/data/test_bad_function.dat") (line " %high-potential iron-sulfur carrier ; synonym:krebs cycle" ) (line_no "6") (parse_class "GO::Parsers::go_ont_parser")) '(error (message "clash on GO:0015000; was 'obsolete' now 'not-polyferredoxin'" ) (file "./t/data/test_bad_function.dat") (line "%not-polyferredoxin ; GO:0015000") (line_no "8") (parse_class "GO::Parsers::go_ont_parser")) ok 4 ok t/t050oboformat.t ........ 1..6 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:06 2018 # Current time GMT: Fri Nov 9 10:47:06 2018 # Using Test.pm version 1.31 ok 1 ok 2 ROOT: biological_process ROOT: molecular_function ROOT: cellular_component ok 3 ok 4 EDGE|GO:0003717|GO:0003715|is_a EDGE|GO:0008301|GO:0003677|is_a EDGE|GO:0003700|GO:0003677|is_a EDGE|GO:0003681|GO:0003677|is_a EDGE|GO:0008301|GO:0003677|is_a EDGE|GO:0003680|GO:0003677|is_a EDGE|GO:0003685|GO:0003677|is_a EDGE|GO:0003697|GO:0003677|is_a EDGE|GO:0003692|GO:0003677|is_a EDGE|GO:0003696|GO:0003677|is_a EDGE|GO:0003720|GO:0003677|is_a EDGE|GO:0000217|GO:0003677|is_a EDGE|GO:0003678|GO:0003677|is_a EDGE|GO:0003684|GO:0003677|is_a EDGE|GO:0003694|GO:0003677|is_a EDGE|GO:0003693|GO:0003677|is_a EDGE|GO:0003687|GO:0003677|is_a EDGE|GO:0003682|GO:0003677|is_a EDGE|GO:0003695|GO:0003677|is_a EDGE|GO:0003690|GO:0003677|is_a EDGE|GO:0000182|GO:0003677|is_a EDGE|GO:0003677|GO:0003676|is_a EDGE|GO:0003709|GO:0003700|is_a EDGE|GO:0003702|GO:0003700|is_a EDGE|GO:0003715|GO:0003700|is_a EDGE|GO:0003710|GO:0003700|is_a EDGE|GO:0003701|GO:0003700|is_a EDGE|GO:0003711|GO:0003700|is_a EDGE|GO:0003700|GO:0003677|is_a EDGE|GO:0007610|GO:0008150|is_a EDGE|GO:0048150|GO:0030534|is_a EDGE|GO:0048150|GO:0045472|is_a EDGE|GO:0007636|GO:0007630|is_a EDGE|GO:0007636|GO:0007635|is_a EDGE|GO:0003834|GO:0003824|is_a EDGE|GO:0003706|GO:0003702|is_a EDGE|GO:0003704|GO:0003702|is_a EDGE|GO:0003703|GO:0003702|is_a EDGE|GO:0003705|GO:0003702|is_a EDGE|GO:0003702|GO:0003700|is_a EDGE|GO:0003707|GO:0004879|is_a EDGE|GO:0003707|GO:0003706|is_a EDGE|GO:0001662|GO:0007610|is_a EDGE|GO:0030534|GO:0007610|is_a EDGE|GO:0007610|GO:0008150|is_a EDGE|GO:0003710|GO:0003700|is_a EDGE|GO:0007628|GO:0008344|is_a EDGE|GO:0007630|GO:0008344|is_a EDGE|GO:0007629|GO:0008344|is_a EDGE|GO:0008344|GO:0007626|is_a EDGE|GO:0008344|GO:0030534|is_a EDGE|GO:0008111|GO:0003824|is_a EDGE|GO:0003684|GO:0003677|is_a EDGE|GO:0000217|GO:0003677|is_a EDGE|GO:0003721|GO:0003720|is_a EDGE|GO:0003691|GO:0003720|is_a EDGE|GO:0003720|GO:0003677|is_a EDGE|GO:0000299|GO:0005624|is_a EDGE|GO:0008263|GO:0003686|is_a EDGE|GO:0004844|GO:0003686|is_a EDGE|GO:0003907|GO:0003686|is_a EDGE|GO:0003686|GO:0003824|is_a EDGE|GO:0003686|GO:0003685|is_a EDGE|GO:0008263|GO:0003686|is_a EDGE|GO:0008263|GO:0008578|is_a EDGE|GO:0043025|GO:0005623|part_of EDGE|GO:0008488|GO:0003824|is_a EDGE|GO:0003716|GO:0003715|is_a EDGE|GO:0003704|GO:0003702|is_a EDGE|GO:0003908|GO:0003824|is_a EDGE|GO:0003908|GO:0008172|is_a EDGE|GO:0003677|GO:0003676|is_a EDGE|GO:0003676|GO:0003674|is_a EDGE|GO:0007636|GO:0007630|is_a EDGE|GO:0007630|GO:0008344|is_a EDGE|GO:0008461|GO:0003824|is_a EDGE|GO:0003832|GO:0003824|is_a EDGE|GO:0003837|GO:0003824|is_a EDGE|GO:0003691|GO:0003690|is_a EDGE|GO:0003691|GO:0003720|is_a EDGE|GO:0003707|GO:0003706|is_a EDGE|GO:0003708|GO:0003706|is_a EDGE|GO:0003706|GO:0003702|is_a EDGE|GO:0003676|GO:0003674|is_a EDGE|GO:0003824|GO:0003674|is_a EDGE|GO:0000133|GO:0005934|part_of EDGE|GO:0005934|GO:0000134|is_a EDGE|GO:0005934|GO:0005933|part_of EDGE|GO:0004844|GO:0008578|is_a EDGE|GO:0004844|GO:0003686|is_a EDGE|GO:0003826|GO:0003824|is_a EDGE|GO:0003680|GO:0003677|is_a EDGE|GO:0008456|GO:0003824|is_a EDGE|GO:0003683|GO:0003682|is_a EDGE|GO:0003682|GO:0003677|is_a EDGE|GO:0003693|GO:0003677|is_a EDGE|GO:0003688|GO:0003687|is_a EDGE|GO:0003689|GO:0003687|is_a EDGE|GO:0003687|GO:0003677|is_a EDGE|GO:0005933|GO:0005623|part_of EDGE|GO:0043025|GO:0005623|part_of EDGE|GO:0000267|GO:0005623|part_of EDGE|GO:0005623|GO:0005575|is_a EDGE|GO:0003695|GO:0003677|is_a EDGE|GO:0003905|GO:0003824|is_a EDGE|GO:0005624|GO:0000267|is_a EDGE|GO:0005626|GO:0000267|is_a EDGE|GO:0000267|GO:0005623|part_of EDGE|GO:0008488|GO:0003824|is_a EDGE|GO:0008336|GO:0003824|is_a EDGE|GO:0008578|GO:0003824|is_a EDGE|GO:0003839|GO:0003824|is_a EDGE|GO:0003833|GO:0003824|is_a EDGE|GO:0003905|GO:0003824|is_a EDGE|GO:0003686|GO:0003824|is_a EDGE|GO:0003825|GO:0003824|is_a EDGE|GO:0003840|GO:0003824|is_a EDGE|GO:0003904|GO:0003824|is_a EDGE|GO:0003834|GO:0003824|is_a EDGE|GO:0003826|GO:0003824|is_a EDGE|GO:0008111|GO:0003824|is_a EDGE|GO:0008461|GO:0003824|is_a EDGE|GO:0003906|GO:0003824|is_a EDGE|GO:0003832|GO:0003824|is_a EDGE|GO:0003837|GO:0003824|is_a EDGE|GO:0008456|GO:0003824|is_a EDGE|GO:0008464|GO:0003824|is_a EDGE|GO:0008416|GO:0003824|is_a EDGE|GO:0003908|GO:0003824|is_a EDGE|GO:0003824|GO:0003674|is_a EDGE|GO:0000182|GO:0003677|is_a EDGE|GO:0008534|GO:0008578|is_a EDGE|GO:0005623|GO:0005575|is_a EDGE|GO:0008159|GO:0003711|is_a EDGE|GO:0008464|GO:0003824|is_a EDGE|GO:0005935|GO:0005933|part_of EDGE|GO:0005934|GO:0005933|part_of EDGE|GO:0005933|GO:0005623|part_of EDGE|GO:0000133|GO:0005935|part_of EDGE|GO:0000142|GO:0005935|part_of EDGE|GO:0005935|GO:0005933|part_of EDGE|GO:0005935|GO:0000134|is_a EDGE|GO:0003709|GO:0003700|is_a EDGE|GO:0003678|GO:0003677|is_a EDGE|GO:0003678|GO:0004386|is_a EDGE|GO:0003696|GO:0003677|is_a EDGE|GO:0005626|GO:0000267|is_a EDGE|GO:0003718|GO:0003715|is_a EDGE|GO:0003701|GO:0003700|is_a EDGE|GO:0003906|GO:0003824|is_a EDGE|GO:0003825|GO:0003824|is_a EDGE|GO:0003904|GO:0003913|is_a EDGE|GO:0003904|GO:0003824|is_a EDGE|GO:0008148|GO:0003711|is_a EDGE|GO:0008159|GO:0003711|is_a EDGE|GO:0003711|GO:0003700|is_a EDGE|GO:0000299|GO:0005624|is_a EDGE|GO:0005624|GO:0000267|is_a EDGE|GO:0003708|GO:0004879|is_a EDGE|GO:0003708|GO:0003706|is_a EDGE|GO:0003694|GO:0003677|is_a EDGE|GO:0008336|GO:0003824|is_a EDGE|GO:0007629|GO:0008344|is_a EDGE|GO:0000133|GO:0005935|part_of EDGE|GO:0000133|GO:0005938|part_of EDGE|GO:0000133|GO:0005934|part_of EDGE|GO:0003703|GO:0003702|is_a EDGE|GO:0003705|GO:0003702|is_a EDGE|GO:0003721|GO:0003964|is_a EDGE|GO:0003721|GO:0003720|is_a EDGE|GO:0048149|GO:0030534|is_a EDGE|GO:0008343|GO:0030534|is_a EDGE|GO:0048150|GO:0030534|is_a EDGE|GO:0008344|GO:0030534|is_a EDGE|GO:0048148|GO:0030534|is_a EDGE|GO:0030534|GO:0007610|is_a EDGE|GO:0000144|GO:0000142|part_of EDGE|GO:0000142|GO:0005935|part_of EDGE|GO:0000142|GO:0030480|is_a EDGE|GO:0007628|GO:0008344|is_a EDGE|GO:0008534|GO:0008578|is_a EDGE|GO:0003907|GO:0008578|is_a EDGE|GO:0004844|GO:0008578|is_a EDGE|GO:0008263|GO:0008578|is_a EDGE|GO:0008578|GO:0003824|is_a EDGE|GO:0003717|GO:0003715|is_a EDGE|GO:0003716|GO:0003715|is_a EDGE|GO:0003718|GO:0003715|is_a EDGE|GO:0003715|GO:0003700|is_a EDGE|GO:0048149|GO:0030534|is_a EDGE|GO:0048149|GO:0045471|is_a EDGE|GO:0008343|GO:0007631|is_a EDGE|GO:0008343|GO:0030534|is_a EDGE|GO:0008416|GO:0003824|is_a EDGE|GO:0008148|GO:0003711|is_a EDGE|GO:0003907|GO:0003686|is_a EDGE|GO:0003907|GO:0008578|is_a EDGE|GO:0001662|GO:0007610|is_a EDGE|GO:0001662|GO:0042596|is_a EDGE|GO:0003686|GO:0003685|is_a EDGE|GO:0003685|GO:0003677|is_a EDGE|GO:0003697|GO:0003677|is_a EDGE|GO:0003683|GO:0003682|is_a EDGE|GO:0003692|GO:0003677|is_a EDGE|GO:0003691|GO:0003690|is_a EDGE|GO:0000150|GO:0003690|is_a EDGE|GO:0003690|GO:0003677|is_a EDGE|GO:0003839|GO:0003824|is_a EDGE|GO:0048148|GO:0042220|is_a EDGE|GO:0048148|GO:0030534|is_a EDGE|GO:0000144|GO:0030481|is_a EDGE|GO:0000144|GO:0000142|part_of EDGE|GO:0003689|GO:0003687|is_a EDGE|GO:0003681|GO:0003677|is_a EDGE|GO:0003833|GO:0003824|is_a EDGE|GO:0003840|GO:0003824|is_a EDGE|GO:0000150|GO:0003690|is_a EDGE|GO:0003688|GO:0003687|is_a total parent rels:118 total (both ways):218 ok 5 ok 6 ok t/t060oboformat2.t ....... 1..36 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:06 2018 # Current time GMT: Fri Nov 9 10:47:06 2018 # Using Test.pm version 1.31 ok 1 Parsing: ./t/data/go-truncated.obo ok 2 ROOT: Part of ROOT: spermidine catabolism to deoxyhypusine, using deoxyhypusine synthase ROOT: 1-phosphatidylinositol-4-phosphate kinase ROOT: root TERMS: 29 SYNS:[eIF-5A]-deoxyhypusine synthase|deoxyhypusine synthase|spermidine dehydrogenase XREFS:EC:2.5.1.46|MetaCyc:2.5.1.46-RXN COMMENT:Note that this reaction is catalyzed by a single enzyme but since it has multiple steps, it appears in the process ontology. DEFXREFS:MetaCyc:1.1.1.249-RXN EDGE|GO:0050983|GO:0046203|is_a DEFXREFS:ISBN:01928006X|GO:jl EDGE|GO:0043050|GO:0042755|is_a EDGE|GO:0042755|GO:0007631|is_a SYNS:pumping behavior DEFXREFS:PMID:2181052|WB:cab EDGE|GO:0043051|GO:0043050|part_of EDGE|GO:0043050|GO:0042755|is_a DEFXREFS:MGI:dph|MEDLINE:99119440 EDGE|GO:0001662|GO:0042596|is_a EDGE|GO:0001662|GO:0007610|is_a DEFXREFS:GO:ai EDGE|GO:0007630|GO:0008344|is_a EDGE|GO:0007629|GO:0008344|is_a EDGE|GO:0007628|GO:0008344|is_a EDGE|GO:0008344|GO:0030534|is_a EDGE|GO:0008344|GO:0007626|is_a DEFXREFS:GO:curators EDGE|GO:0042595|GO:0042594|is_a EDGE|GO:0042595|GO:0007631|is_a DEFXREFS:GO:curators EDGE|GO:0007610|GO:0008150|is_a EDGE|GO:0008150|root|is_a DEFXREFS:GO:jic|FBrf:0044924|URL:http://fbserver.gen.cam.ac.uk EDGE|GO:0007637|GO:0007635|is_a DEFXREFS:URL:http://cancerweb.ncl.ac.uk/|GO:jl EDGE|GO:0042756|GO:0007631|is_a DEFXREFS:GO:curators EDGE|GO:0042048|GO:0007635|is_a EDGE|GO:0007637|GO:0007635|is_a EDGE|GO:0007636|GO:0007635|is_a EDGE|GO:0007635|GO:0007610|is_a DEFXREFS:ISBN:0198506732|FB:bf EDGE|GO:0035095|GO:0030534|is_a EDGE|GO:0035095|GO:0035094|is_a DEFXREFS:GO:jic|ISBN:0198606907 EDGE|GO:0007629|GO:0008344|is_a DEFXREFS:WB:cab|PMID:2181052 EDGE|GO:0043051|GO:0043050|part_of DEFXREFS:GO:jic EDGE|GO:0007636|GO:0007635|is_a EDGE|GO:0007636|GO:0007630|is_a DEFXREFS:GO:mah|ISBN:0877797099 EDGE|GO:0008344|GO:0030534|is_a EDGE|GO:0048149|GO:0030534|is_a EDGE|GO:0008343|GO:0030534|is_a EDGE|GO:0035095|GO:0030534|is_a EDGE|GO:0048150|GO:0030534|is_a EDGE|GO:0048148|GO:0030534|is_a EDGE|GO:0030534|GO:0007610|is_a DEFXREFS:GO:jic EDGE|GO:0048149|GO:0030534|is_a EDGE|GO:0048149|GO:0045471|is_a SYNS:fake synonym|FAKE:0001|class I PI3K EXACT SYNS:fake synonym COMMENT:To update annotations, consider the molecular function term '1-phosphatidylinositol-4-phosphate 5-kinase activity ; GO:0016308'. DEFXREFS:GO:curators|EC:2.7.1.68 DEFXREFS:GO:jic EDGE|GO:0048150|GO:0030534|is_a EDGE|GO:0048150|GO:0045472|is_a DEFXREFS:GO:jic EDGE|GO:0042048|GO:0007635|is_a SYNS:behaviour DEFXREFS:WB:ems|ISBN:0395448956 EDGE|GO:0007631|GO:0007610|is_a EDGE|GO:0030534|GO:0007610|is_a EDGE|GO:0048266|GO:0007610|is_a EDGE|GO:0042630|GO:0007610|is_a EDGE|GO:0007635|GO:0007610|is_a EDGE|GO:0001662|GO:0007610|is_a EDGE|GO:0007610|GO:0008150|is_a SYNS:drinking|eating DEFXREFS:GO:mah EDGE|GO:0042755|GO:0007631|is_a EDGE|GO:0042756|GO:0007631|is_a EDGE|GO:0042595|GO:0007631|is_a EDGE|GO:0008343|GO:0007631|is_a EDGE|GO:0007631|GO:0007610|is_a DEFXREFS:GO:jic|URL:http://cancerweb.ncl.ac.uk EDGE|GO:0048266|GO:0007610|is_a EDGE|GO:0048266|GO:0048265|is_a DEFXREFS:GO:mah EDGE|GO:0008343|GO:0030534|is_a EDGE|GO:0008343|GO:0007631|is_a DEFXREFS:GO:jic EDGE|GO:0048148|GO:0042220|is_a EDGE|GO:0048148|GO:0030534|is_a DEFXREFS:GO:jic|ISBN:0198606907 EDGE|GO:0007636|GO:0007630|is_a EDGE|GO:0007630|GO:0008344|is_a EDGE|GO:0008150|root|is_a DEFXREFS:GO:jic|ISBN:0198606907 EDGE|GO:0007628|GO:0008344|is_a SYNS:behavioral response to drought|behavioral response to thirst DEFXREFS:GO:jl EDGE|GO:0042630|GO:0007610|is_a EDGE|GO:0042630|GO:0009414|is_a total defs:27 total def xrefs:42 total xrefs:2 total comments:2 total syns:12 total EXACT syns:1 total obs:1 total parent rels:37 total (both ways):64 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok 10 ok 11 ok 12 ./t/data/go-truncated.obo from:obo_text to:obo_xml ok 13 Parsing: ./t/data/go-truncated.obo.obo_xml ok 14 ROOT: 1-phosphatidylinositol-4-phosphate kinase ROOT: root ROOT: Part of ROOT: spermidine catabolism to deoxyhypusine, using deoxyhypusine synthase TERMS: 29 DEFXREFS:GO:jic EDGE|GO:0042048|GO:0007635|is_a SYNS:class I PI3K|fake synonym|FAKE:0001 EXACT SYNS:fake synonym COMMENT:To update annotations, consider the molecular function term '1-phosphatidylinositol-4-phosphate 5-kinase activity ; GO:0016308'. DEFXREFS:GO:curators|EC:2.7.1.68 DEFXREFS:GO:jic EDGE|GO:0048150|GO:0045472|is_a EDGE|GO:0048150|GO:0030534|is_a DEFXREFS:GO:jic|URL:http://cancerweb.ncl.ac.uk EDGE|GO:0048266|GO:0007610|is_a EDGE|GO:0048266|GO:0048265|is_a SYNS:drinking|eating DEFXREFS:GO:mah EDGE|GO:0042755|GO:0007631|is_a EDGE|GO:0042756|GO:0007631|is_a EDGE|GO:0042595|GO:0007631|is_a EDGE|GO:0008343|GO:0007631|is_a EDGE|GO:0007631|GO:0007610|is_a SYNS:behaviour DEFXREFS:WB:ems|ISBN:0395448956 EDGE|GO:0007631|GO:0007610|is_a EDGE|GO:0042630|GO:0007610|is_a EDGE|GO:0030534|GO:0007610|is_a EDGE|GO:0048266|GO:0007610|is_a EDGE|GO:0007635|GO:0007610|is_a EDGE|GO:0001662|GO:0007610|is_a EDGE|GO:0007610|GO:0008150|is_a DEFXREFS:GO:mah EDGE|GO:0008343|GO:0030534|is_a EDGE|GO:0008343|GO:0007631|is_a DEFXREFS:GO:jic EDGE|GO:0048148|GO:0042220|is_a EDGE|GO:0048148|GO:0030534|is_a DEFXREFS:GO:jic|ISBN:0198606907 EDGE|GO:0007628|GO:0008344|is_a SYNS:behavioral response to drought|behavioral response to thirst DEFXREFS:GO:jl EDGE|GO:0042630|GO:0007610|is_a EDGE|GO:0042630|GO:0009414|is_a DEFXREFS:GO:jic|ISBN:0198606907 EDGE|GO:0007636|GO:0007630|is_a EDGE|GO:0007630|GO:0008344|is_a EDGE|GO:0008150|root|is_a SYNS:pumping behavior DEFXREFS:PMID:2181052|WB:cab EDGE|GO:0043051|GO:0043050|part_of EDGE|GO:0043050|GO:0042755|is_a DEFXREFS:ISBN:01928006X|GO:jl EDGE|GO:0043050|GO:0042755|is_a EDGE|GO:0042755|GO:0007631|is_a DEFXREFS:GO:ai EDGE|GO:0007629|GO:0008344|is_a EDGE|GO:0007630|GO:0008344|is_a EDGE|GO:0007628|GO:0008344|is_a EDGE|GO:0008344|GO:0007626|is_a EDGE|GO:0008344|GO:0030534|is_a DEFXREFS:MGI:dph|MEDLINE:99119440 EDGE|GO:0001662|GO:0042596|is_a EDGE|GO:0001662|GO:0007610|is_a SYNS:[eIF-5A]-deoxyhypusine synthase|deoxyhypusine synthase|spermidine dehydrogenase XREFS:EC:2.5.1.46|MetaCyc:2.5.1.46-RXN COMMENT:Note that this reaction is catalyzed by a single enzyme but since it has multiple steps, it appears in the process ontology. DEFXREFS:MetaCyc:1.1.1.249-RXN EDGE|GO:0050983|GO:0046203|is_a DEFXREFS:GO:jic|FBrf:0044924|URL:http://fbserver.gen.cam.ac.uk EDGE|GO:0007637|GO:0007635|is_a DEFXREFS:URL:http://cancerweb.ncl.ac.uk/|GO:jl EDGE|GO:0042756|GO:0007631|is_a DEFXREFS:GO:curators EDGE|GO:0042595|GO:0042594|is_a EDGE|GO:0042595|GO:0007631|is_a DEFXREFS:GO:curators EDGE|GO:0007610|GO:0008150|is_a EDGE|GO:0008150|root|is_a DEFXREFS:WB:cab|PMID:2181052 EDGE|GO:0043051|GO:0043050|part_of DEFXREFS:GO:curators EDGE|GO:0042048|GO:0007635|is_a EDGE|GO:0007637|GO:0007635|is_a EDGE|GO:0007636|GO:0007635|is_a EDGE|GO:0007635|GO:0007610|is_a DEFXREFS:ISBN:0198506732|FB:bf EDGE|GO:0035095|GO:0035094|is_a EDGE|GO:0035095|GO:0030534|is_a DEFXREFS:GO:jic|ISBN:0198606907 EDGE|GO:0007629|GO:0008344|is_a DEFXREFS:GO:mah|ISBN:0877797099 EDGE|GO:0048149|GO:0030534|is_a EDGE|GO:0008344|GO:0030534|is_a EDGE|GO:0008343|GO:0030534|is_a EDGE|GO:0048150|GO:0030534|is_a EDGE|GO:0048148|GO:0030534|is_a EDGE|GO:0035095|GO:0030534|is_a EDGE|GO:0030534|GO:0007610|is_a DEFXREFS:GO:jic EDGE|GO:0048149|GO:0030534|is_a EDGE|GO:0048149|GO:0045471|is_a DEFXREFS:GO:jic EDGE|GO:0007636|GO:0007635|is_a EDGE|GO:0007636|GO:0007630|is_a total defs:27 total def xrefs:42 total xrefs:2 total comments:2 total syns:12 total EXACT syns:1 total obs:1 total parent rels:37 total (both ways):64 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 ok 21 ok 22 ok 23 ok 24 ./t/data/go-truncated.obo.obo_xml from:obo_xml to:obo_text ok 25 Parsing: ./t/data/go-truncated.obo.obo_xml.obo_text ok 26 ROOT: root ROOT: 1-phosphatidylinositol-4-phosphate kinase ROOT: Part of ROOT: spermidine catabolism to deoxyhypusine, using deoxyhypusine synthase TERMS: 29 DEFXREFS:GO:jic|ISBN:0198606907 EDGE|GO:0007636|GO:0007630|is_a EDGE|GO:0007630|GO:0008344|is_a EDGE|GO:0008150|root|is_a SYNS:behavioral response to drought|behavioral response to thirst DEFXREFS:GO:jl EDGE|GO:0042630|GO:0007610|is_a EDGE|GO:0042630|GO:0009414|is_a DEFXREFS:GO:jic|ISBN:0198606907 EDGE|GO:0007628|GO:0008344|is_a DEFXREFS:GO:mah EDGE|GO:0008343|GO:0030534|is_a EDGE|GO:0008343|GO:0007631|is_a DEFXREFS:GO:jic EDGE|GO:0048148|GO:0042220|is_a EDGE|GO:0048148|GO:0030534|is_a SYNS:drinking|eating DEFXREFS:GO:mah EDGE|GO:0042756|GO:0007631|is_a EDGE|GO:0042755|GO:0007631|is_a EDGE|GO:0008343|GO:0007631|is_a EDGE|GO:0042595|GO:0007631|is_a EDGE|GO:0007631|GO:0007610|is_a SYNS:behaviour DEFXREFS:WB:ems|ISBN:0395448956 EDGE|GO:0001662|GO:0007610|is_a EDGE|GO:0007635|GO:0007610|is_a EDGE|GO:0042630|GO:0007610|is_a EDGE|GO:0048266|GO:0007610|is_a EDGE|GO:0030534|GO:0007610|is_a EDGE|GO:0007631|GO:0007610|is_a EDGE|GO:0007610|GO:0008150|is_a DEFXREFS:GO:jic|URL:http://cancerweb.ncl.ac.uk EDGE|GO:0048266|GO:0048265|is_a EDGE|GO:0048266|GO:0007610|is_a SYNS:FAKE:0001|fake synonym|class I PI3K EXACT SYNS:fake synonym COMMENT:To update annotations, consider the molecular function term '1-phosphatidylinositol-4-phosphate 5-kinase activity ; GO:0016308'. DEFXREFS:GO:curators|EC:2.7.1.68 DEFXREFS:GO:jic EDGE|GO:0048150|GO:0045472|is_a EDGE|GO:0048150|GO:0030534|is_a DEFXREFS:GO:jic EDGE|GO:0042048|GO:0007635|is_a DEFXREFS:GO:jic EDGE|GO:0007636|GO:0007635|is_a EDGE|GO:0007636|GO:0007630|is_a DEFXREFS:GO:mah|ISBN:0877797099 EDGE|GO:0048149|GO:0030534|is_a EDGE|GO:0008344|GO:0030534|is_a EDGE|GO:0048150|GO:0030534|is_a EDGE|GO:0048148|GO:0030534|is_a EDGE|GO:0035095|GO:0030534|is_a EDGE|GO:0008343|GO:0030534|is_a EDGE|GO:0030534|GO:0007610|is_a DEFXREFS:GO:jic EDGE|GO:0048149|GO:0030534|is_a EDGE|GO:0048149|GO:0045471|is_a DEFXREFS:GO:jic|ISBN:0198606907 EDGE|GO:0007629|GO:0008344|is_a DEFXREFS:ISBN:0198506732|FB:bf EDGE|GO:0035095|GO:0035094|is_a EDGE|GO:0035095|GO:0030534|is_a DEFXREFS:GO:curators EDGE|GO:0007637|GO:0007635|is_a EDGE|GO:0042048|GO:0007635|is_a EDGE|GO:0007636|GO:0007635|is_a EDGE|GO:0007635|GO:0007610|is_a DEFXREFS:WB:cab|PMID:2181052 EDGE|GO:0043051|GO:0043050|part_of DEFXREFS:GO:curators EDGE|GO:0007610|GO:0008150|is_a EDGE|GO:0008150|root|is_a DEFXREFS:GO:curators EDGE|GO:0042595|GO:0007631|is_a EDGE|GO:0042595|GO:0042594|is_a DEFXREFS:URL:http://cancerweb.ncl.ac.uk/|GO:jl EDGE|GO:0042756|GO:0007631|is_a DEFXREFS:GO:jic|FBrf:0044924|URL:http://fbserver.gen.cam.ac.uk EDGE|GO:0007637|GO:0007635|is_a SYNS:[eIF-5A]-deoxyhypusine synthase|deoxyhypusine synthase|spermidine dehydrogenase XREFS:EC:2.5.1.46|MetaCyc:2.5.1.46-RXN COMMENT:Note that this reaction is catalyzed by a single enzyme but since it has multiple steps, it appears in the process ontology. DEFXREFS:MetaCyc:1.1.1.249-RXN EDGE|GO:0050983|GO:0046203|is_a SYNS:pumping behavior DEFXREFS:PMID:2181052|WB:cab EDGE|GO:0043051|GO:0043050|part_of EDGE|GO:0043050|GO:0042755|is_a DEFXREFS:ISBN:01928006X|GO:jl EDGE|GO:0043050|GO:0042755|is_a EDGE|GO:0042755|GO:0007631|is_a DEFXREFS:GO:ai EDGE|GO:0007628|GO:0008344|is_a EDGE|GO:0007630|GO:0008344|is_a EDGE|GO:0007629|GO:0008344|is_a EDGE|GO:0008344|GO:0007626|is_a EDGE|GO:0008344|GO:0030534|is_a DEFXREFS:MGI:dph|MEDLINE:99119440 EDGE|GO:0001662|GO:0007610|is_a EDGE|GO:0001662|GO:0042596|is_a total defs:27 total def xrefs:42 total xrefs:2 total comments:2 total syns:12 total EXACT syns:1 total obs:1 total parent rels:37 total (both ways):64 ok 27 ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok t/t070parseannot2obj.t ... 1..5 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:06 2018 # Current time GMT: Fri Nov 9 10:47:06 2018 # Using Test.pm version 1.31 ok 1 ok 2 TERM: GO:0003673 Gene_Ontology *DEEP: 86 TERM: GO:0008150 biological_process *DEEP: 52 TERM: GO:0007610 behavior *DEEP: 0 TERM: GO:0000004 biological_process unknown PROD: ziplock *DEEP: 1 TERM: GO:0007154 cell communication *DEEP: 3 TERM: GO:0008037 cell recognition *DEEP: 0 TERM: GO:0007267 cell-cell signaling *DEEP: 0 TERM: GO:0030383 host-pathogen interaction *DEEP: 0 TERM: GO:0009719 response to endogenous stimulus PROD: zip *DEEP: 1 TERM: GO:0009605 response to external stimulus *DEEP: 0 TERM: GO:0009628 response to abiotic stimulus *DEEP: 0 TERM: GO:0009607 response to biotic stimulus *DEEP: 0 TERM: GO:0007165 signal transduction PROD: zpg PROD: Zyx102EF *DEEP: 2 TERM: GO:0008151 cell growth and/or maintenance *DEEP: 18 TERM: GO:0007049 cell cycle PROD: zip PROD: zwilch *DEEP: 2 TERM: GO:0016049 cell growth *DEEP: 0 TERM: GO:0019725 cell homeostasis *DEEP: 0 TERM: GO:0016043 cell organization and biogenesis *DEEP: 3 TERM: GO:0007028 cytoplasm organization and biogenesis *DEEP: 3 TERM: GO:0006996 organelle organization and biogenesis *DEEP: 3 TERM: GO:0007010 cytoskeleton organization and biogenesis PROD: zip PROD: zip PROD: Zyx102EF *DEEP: 3 TERM: GO:0007005 mitochondrion organization and biogenesis *DEEP: 0 TERM: GO:0008283 cell proliferation PROD: zip *DEEP: 1 TERM: GO:0006943 chemi-mechanical coupling *DEEP: 0 TERM: GO:0008152 metabolism *DEEP: 10 TERM: GO:0006519 amino acid and derivative metabolism *DEEP: 0 TERM: GO:0009058 biosynthesis *DEEP: 0 TERM: GO:0005975 carbohydrate metabolism PROD: Zw *DEEP: 1 TERM: GO:0009056 catabolism PROD: Zw *DEEP: 1 TERM: GO:0006731 coenzymes and prosthetic group metabolism PROD: Zw *DEEP: 1 TERM: GO:0006118 electron transport *DEEP: 0 TERM: GO:0006091 energy pathways PROD: Zw *DEEP: 1 TERM: GO:0006629 lipid metabolism *DEEP: 0 TERM: GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolism PROD: Zw *DEEP: 6 TERM: GO:0006259 DNA metabolism *DEEP: 0 TERM: GO:0006350 transcription PROD: zfh2 PROD: Zfrp8 PROD: Zn72D PROD: Zpr1 PROD: Zyx102EF *DEEP: 5 TERM: GO:0019538 protein metabolism *DEEP: 0 TERM: GO:0006412 protein biosynthesis *DEEP: 0 TERM: GO:0006464 protein modification *DEEP: 0 TERM: GO:0019748 secondary metabolism *DEEP: 0 TERM: GO:0006950 response to stress *DEEP: 0 TERM: GO:0006810 transport *DEEP: 2 TERM: GO:0006811 ion transport PROD: ZIP1 PROD: Zip3 *DEEP: 2 TERM: GO:0015031 protein transport *DEEP: 0 TERM: GO:0016265 death *DEEP: 2 TERM: GO:0008219 cell death PROD: Zfrp8 PROD: zip *DEEP: 2 TERM: GO:0007275 development PROD: zip *DEEP: 23 TERM: GO:0030154 cell differentiation PROD: zip *DEEP: 1 TERM: GO:0009790 embryonic development PROD: zip PROD: zip PROD: zip PROD: zip PROD: zip *DEEP: 5 TERM: GO:0040007 growth *DEEP: 0 TERM: GO:0009653 morphogenesis PROD: zfh2 PROD: zfh2 PROD: zip PROD: zip PROD: zip PROD: zip PROD: zip PROD: zip PROD: zip PROD: zip PROD: Zwim *DEEP: 11 TERM: GO:0040029 regulation of gene expression, epigenetic *DEEP: 0 TERM: GO:0000003 reproduction PROD: zip PROD: ziti PROD: zpg PROD: zpg PROD: zuc *DEEP: 5 TERM: GO:0007582 physiological processes PROD: zip PROD: zip PROD: zip PROD: zormin PROD: Zyx102EF *DEEP: 5 TERM: GO:0016032 viral life cycle *DEEP: 0 TERM: GO:0005575 cellular_component *DEEP: 13 TERM: GO:0005623 cell PROD: zpg *DEEP: 11 TERM: GO:0005622 intracellular *DEEP: 10 TERM: GO:0005694 chromosome *DEEP: 0 TERM: GO:0005929 cilium *DEEP: 0 TERM: GO:0005737 cytoplasm PROD: zip *DEEP: 4 TERM: GO:0000229 cytoplasmic chromosome *DEEP: 0 TERM: GO:0016023 cytoplasmic vesicle *DEEP: 0 TERM: GO:0005856 cytoskeleton PROD: zip PROD: zip PROD: Zyx102EF *DEEP: 3 TERM: GO:0005829 cytosol *DEEP: 0 TERM: GO:0005783 endoplasmic reticulum *DEEP: 0 TERM: GO:0005768 endosome *DEEP: 0 TERM: GO:0005794 Golgi apparatus *DEEP: 0 TERM: GO:0005811 lipid particle *DEEP: 0 TERM: GO:0005815 microtubule organizing center *DEEP: 0 TERM: GO:0005739 mitochondrion *DEEP: 0 TERM: GO:0005777 peroxisome *DEEP: 0 TERM: GO:0009536 plastid *DEEP: 0 TERM: GO:0005840 ribosome *DEEP: 0 TERM: GO:0005773 vacuole *DEEP: 0 TERM: GO:0005764 lysosome *DEEP: 0 TERM: GO:0005634 nucleus PROD: zfh2 PROD: zfh2 PROD: Zfrp8 *DEEP: 4 TERM: GO:0000228 nuclear chromosome *DEEP: 0 TERM: GO:0005635 nuclear membrane *DEEP: 0 TERM: GO:0005730 nucleolus PROD: Zpr1 *DEEP: 1 TERM: GO:0005654 nucleoplasm *DEEP: 0 TERM: GO:0005886 plasma membrane PROD: zpg PROD: zpg *DEEP: 2 TERM: GO:0009579 thylakoid *DEEP: 0 TERM: GO:0008372 cellular_component unknown PROD: ziplock PROD: ziti *DEEP: 2 TERM: GO:0030312 external encapsulating structure *DEEP: 0 TERM: GO:0030313 cell envelope *DEEP: 0 TERM: GO:0005618 cell wall *DEEP: 0 TERM: GO:0005576 extracellular *DEEP: 0 TERM: GO:0005578 extracellular matrix *DEEP: 0 TERM: GO:0005615 extracellular space *DEEP: 0 TERM: GO:0005941 unlocalized *DEEP: 0 TERM: GO:0003674 molecular_function *DEEP: 21 TERM: GO:0016209 antioxidant activity *DEEP: 0 TERM: GO:0016329 apoptosis regulator activity *DEEP: 0 TERM: GO:0005488 binding *DEEP: 6 TERM: GO:0005509 calcium ion binding *DEEP: 0 TERM: GO:0030246 carbohydrate binding *DEEP: 0 TERM: GO:0008289 lipid binding *DEEP: 0 TERM: GO:0003676 nucleic acid binding *DEEP: 5 TERM: GO:0003677 DNA binding PROD: zfh2 PROD: zfh2 PROD: Zfrp8 *DEEP: 4 TERM: GO:0003682 chromatin binding PROD: Zfrp8 *DEEP: 1 TERM: GO:0003700 transcription factor activity *DEEP: 0 TERM: GO:0004518 nuclease activity *DEEP: 0 TERM: GO:0003723 RNA binding PROD: Zn72D *DEEP: 1 TERM: GO:0008135 translation factor activity, nucleic acid binding *DEEP: 0 TERM: GO:0000166 nucleotide binding *DEEP: 0 TERM: GO:0019825 oxygen binding *DEEP: 0 TERM: GO:0005515 protein binding *DEEP: 1 TERM: GO:0008092 cytoskeletal protein binding PROD: zip *DEEP: 1 TERM: GO:0003779 actin binding *DEEP: 0 TERM: GO:0003824 catalytic activity PROD: Zw PROD: Zw *DEEP: 4 TERM: GO:0016787 hydrolase PROD: zip *DEEP: 1 TERM: GO:0008233 peptidase activity *DEEP: 0 TERM: GO:0004721 protein phosphatase activity *DEEP: 0 TERM: GO:0016301 kinase *DEEP: 1 TERM: GO:0004672 protein kinase activity PROD: Zwim *DEEP: 1 TERM: GO:0016740 transferase *DEEP: 0 TERM: GO:0005194 cell adhesion molecule activity *DEEP: 0 TERM: GO:0003754 chaperone activity *DEEP: 0 TERM: GO:0030188 chaperone regulator activity *DEEP: 0 TERM: GO:0003793 defense/immunity protein activity *DEEP: 0 TERM: GO:0030234 enzyme regulator activity *DEEP: 0 TERM: GO:0005554 molecular_function unknown PROD: ziplock PROD: ziti *DEEP: 2 TERM: GO:0003774 motor activity PROD: zip *DEEP: 1 TERM: GO:0045735 nutrient reservoir activity *DEEP: 0 TERM: GO:0017028 protein stabilization activity *DEEP: 0 TERM: GO:0008638 protein tagging activity *DEEP: 0 TERM: GO:0004871 signal transducer activity *DEEP: 0 TERM: GO:0004872 receptor activity *DEEP: 0 TERM: GO:0005102 receptor binding *DEEP: 0 TERM: GO:0005198 structural molecule activity PROD: zip PROD: zormin PROD: Zyx102EF *DEEP: 3 TERM: GO:0030528 transcription regulator activity PROD: zfh2 PROD: Zyx102EF *DEEP: 2 TERM: GO:0045182 translation regulator *DEEP: 0 TERM: GO:0005215 transporter activity PROD: ZIP1 PROD: Zip3 PROD: zpg *DEEP: 3 TERM: GO:0005489 electron transporter activity *DEEP: 0 TERM: GO:0005216 ion channel activity *DEEP: 0 TERM: GO:0005326 neurotransmitter transporter activity *DEEP: 0 TERM: GO:0030533 triplet codon-amino acid adaptor activity *DEEP: 0 TERM: part_of part_of *DEEP: 0 ok 3 annots: 86 ok 4 Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene Type:gene ok 5 ok t/t080gofmt2.t ........... 1..3 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:07 2018 # Current time GMT: Fri Nov 9 10:47:07 2018 # Using Test.pm version 1.31 ok 1 ok 2 '(term (id "GO:0003673") (name "Gene_Ontology") (is_root "1") (namespace "Gene_Ontology")) '(term (id "GO:0003674") (name "molecular_function") (namespace "molecular_function") (relationship (type "part_of") (to "GO:0003673"))) '(term (id "X:1") (name "zoo") (namespace "molecular_function") (is_a "GO:0003674")) '(term (id "X:2") (name "goo") (namespace "molecular_function") (relationship (type "inverse_of") (to "X:1"))) '(term (id "X;3") (name "poo") (namespace "molecular_function") (relationship (type "disjoint_from") (to "X:2"))) '(term (id "X:5") (name "ooh") (namespace "molecular_function") (relationship (type "star") (to "X;3"))) '(term (id "X:6") (name "moo") (namespace "molecular_function") (relationship (type "hash") (to "X:5"))) ok 3 ok t/t100roundtrip.t ........ 1..2 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:07 2018 # Current time GMT: Fri Nov 9 10:47:07 2018 # Using Test.pm version 1.31 ./t/data/test-function.dat from:go_ont to:prolog ./t/data/test-function.dat from:go_ont to:obo_xml ./t/data/test-function.dat from:go_ont to:rdf ./t/data/test-function.dat from:go_ont to:pathlist ./t/data/test-function.dat from:go_ont to:summary TOTAL TERMS : 72 TOTAL SYNS : 2 TOTAL XREFS : 17 ./t/data/test-function.dat from:go_ont to:obo_text ./t/data/test-function.dat.obo_text from:obo_text to:prolog ./t/data/test-function.dat.obo_text from:obo_text to:rdf ./t/data/test-function.dat.obo_text from:obo_text to:pathlist ./t/data/test-function.dat.obo_text from:obo_text to:summary TOTAL TERMS : 72 TOTAL SYNS : 2 TOTAL XREFS : 17 ./t/data/test-function.dat.obo_text from:obo_text to:obo_xml ./t/data/test-function.dat.obo_text.obo_xml from:obo_xml to:go_ont ok 1 ./t/data/GO.defs from:go_def to:obo_xml ./t/data/GO.defs.obo_xml from:obo_xml to:go_def ok 2 ok t/t110basic.t ............ 1..4 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:09 2018 # Current time GMT: Fri Nov 9 10:47:09 2018 # Using Test.pm version 1.31 GO:0016604 GO:0016604 ok 1 PARENTS nucleoplasm ok 2 Gene_Ontology cell cellular_component intracellular nucleoplasm nucleus ok 3 GO:0005654 RENT complex chromatin remodeling complex chromatin silencing complex nuclear body nuclear speck ok 4 GO:0005654 ok t/t130relations.t ........ 1..7 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:09 2018 # Current time GMT: Fri Nov 9 10:47:09 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 OBO_REL:part_of ok 7 ok t/t140subgraph.t ......... 1..1 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:10 2018 # Current time GMT: Fri Nov 9 10:47:10 2018 # Using Test.pm version 1.31 $Gene_Ontology ; GO:0003673 %molecular_function ; GO:0003674 %nucleic acid binding ; GO:0003676 %DNA binding ; GO:0003677 %transcription factor ; GO:0003700 ; synonym:GO:0000130 ok 1 ok t/t150xref.t ............. 1..2 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:10 2018 # Current time GMT: Fri Nov 9 10:47:10 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok t/t160logicaldef.t ....... 1..5 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:11 2018 # Current time GMT: Fri Nov 9 10:47:11 2018 # Using Test.pm version 1.31 ok 1 ns: biological_process ok 2 ldef ns: foo ok 3 GO:0007626 OBOL:during FBdv:00005336 GO:0007626 ok 4 ok 5 ok t/t170chadoxml.t ......... 1..9 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:11 2018 # Current time GMT: Fri Nov 9 10:47:11 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok t/t175chadoxml_oborel.t .. 1..9 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:11 2018 # Current time GMT: Fri Nov 9 10:47:11 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 ok t/t180ncbi_taxonomy.t .... 1..4 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:12 2018 # Current time GMT: Fri Nov 9 10:47:12 2018 # Using Test.pm version 1.31 ./t/data/sample.ncbi_taxonomy from:ncbi_taxonomy to:obo ok 1 ok 2 ok 3 Phenylobacterium immobile {test} ok 4 ok t/t200impliedlinks.t ..... 1..2 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:12 2018 # Current time GMT: Fri Nov 9 10:47:12 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok t/t210cache.t ............ 1..6 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:13 2018 # Current time GMT: Fri Nov 9 10:47:13 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 ok t/t220xref_esc.t ......... 1..6 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:13 2018 # Current time GMT: Fri Nov 9 10:47:13 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 UM-BBD_pathwayID:2,4,5-t UM-BBD_pathwayID:2,4,5-t ok 4 ok 5 ok 6 ok t/t230term_expression.t .. 1..1 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:13 2018 # Current time GMT: Fri Nov 9 10:47:13 2018 # Using Test.pm version 1.31 GO:1234 part_of CL:abc GO:1234 part_of CL:abc part_of AO:999 GO:1234 part_of CL:abc part_of AO:999 has_coordinate x:left GO:1234 results_in_output_of CHEBI:765 ^part_of CL:abc part_of AO:999 has_coordinate x:left ok 1 ok t/t240ga2obj.t ........... 1..3 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:13 2018 # Current time GMT: Fri Nov 9 10:47:13 2018 # Using Test.pm version 1.31 ok 1 ok 2 ok 3 ok t/t260oborel_in_chado.t .. 1..6 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:14 2018 # Current time GMT: Fri Nov 9 10:47:14 2018 # Using Test.pm version 1.31 OBO_REL part_of part_of relationship internal is_transitive cvterm_property_type is_transitive 1 1 OBO_REL part_of ok 1 relationship ok 2 ok 3 ok 4 ok 5 ok 6 ok t/t270oborel_in_owl.t .... 1..4 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:14 2018 # Current time GMT: Fri Nov 9 10:47:14 2018 # Using Test.pm version 1.31 '(owl:TransitiveProperty (@ (rdf:about "http://purl.org/obo/owl/OBO_REL#part_of")) (oboInOwl:hasOBONamespace "relationship") (oboInOwl:hasDbXref (oboInOwl:DbXref (rdfs:label "OBO_REL:part_of") (oboInOwl:hasURI (@ (rdf:datatype "http://www.w3.org/2001/XMLSchema#anyURI")) (. "http://purl.org/obo/owl/OBO_REL#OBO_REL_part_of" ))))) ok 1 http://purl.org/obo/owl/OBO_REL#part_of ok 2 '(owl:ObjectProperty (@ (rdf:about "http://purl.org/obo/owl/obo#foo")) (rdfs:label (@ (xml:lang "en")) (. "foo")) (rdfs:comment (@ (rdf:datatype "http://www.w3.org/2001/XMLSchema#string")) (. "for testing purposes"))) ok 3 '(owl:AnnotationProperty (@ (rdf:about "http://purl.org/obo/owl/obo#bar")) (rdfs:label (@ (xml:lang "en")) (. "bar")) (rdfs:comment (@ (rdf:datatype "http://www.w3.org/2001/XMLSchema#string")) (. "for testing purposes"))) ok 4 ok t/t290disjoint.t ......... 1..2 # Running under perl version 5.028000 for linux # Current time local: Fri Nov 9 10:47:15 2018 # Current time GMT: Fri Nov 9 10:47:15 2018 # Using Test.pm version 1.31 ok 1 GO:0009987 GO:0051704 ok 2 ok All tests successful. Files=24, Tests=140, 10 wallclock secs ( 0.28 usr 0.04 sys + 9.55 cusr 0.44 csys = 10.31 CPU) Result: PASS make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install make -j4 install DESTDIR=/<>/debian/libgo-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/<>' Manifying 10 pod documents Manifying 38 pod documents Manifying 33 pod documents Installing /<>/debian/libgo-perl/usr/share/perl5/go-perl.pod Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Utils.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Basic.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/ObjFactory.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/ObjCache.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/xsl_base.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/obj_yaml.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/rdf.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/text_html.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/obo_godb_flat.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/tbl.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/obo_html.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/go_def.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/obj_storable.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/abstract_sql_writer.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/xml.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/owl_to_obo_text.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/abstract_prolog_writer.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/prolog.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/summary.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/lexanalysis2sql.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/obo.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/sxpr.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/base.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/pathlist.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/obo_xml.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/obo_sxpr.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/obo_text.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/owl.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/lexanalysis.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/go_ont.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/go_xref.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/obj.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Handlers/godb_prestore.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/IO/XML.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/IO/Dotty.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/IO/Analysis.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/IO/Blast.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/IO/OBDXML.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/IO/RDFXML.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/IO/ObanOwl.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/IO/go_assoc.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Metadata/Panther.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/obj_storable_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/unknown_format_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/refgenomes_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/go_xref_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/obo_text_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/references_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/go_ont_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/ncbi_taxonomy_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/base_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/obo_xml_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/obj_emitter.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/go_def_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/mesh_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/ncbi_taxon_names_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/owl_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/ParserEventNames.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/generic_tagval_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/go_ids_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/obo_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/locuslink_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/mgi_assoc_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/obj_yaml_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/go_assoc_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Parsers/xrf_abbs_parser.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_to_simple_owl.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/chadoxml_to_oboxml.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/ipr_to_oboxml.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_to_owl.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_to_chadoxml.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_filter.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_to_summary_table.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_to_obotext.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/owl_to_oboxml.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_to_dig.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_to_racer.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_to_obd_prestore.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/oboxml_to_godb_prestore.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/xsl/text_html.xsl Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/GeneProduct.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/DB.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Restriction.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Root.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Evidence.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Association.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Path.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Property.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/GraphIterator.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/CrossProduct.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Term.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/GraphNodeInstance.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Seq.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Graph.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Xref.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Modification.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/LogicalDefinition.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Species.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/TreeIterator.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Ontology.pm Installing /<>/debian/libgo-perl/usr/share/perl5/GO/Model/Relationship.pm Installing /<>/debian/libgo-perl/usr/share/man/man1/go-dag-summary.pl.1p Installing /<>/debian/libgo-perl/usr/share/man/man1/go-show-paths-to-root.pl.1p Installing /<>/debian/libgo-perl/usr/share/man/man1/go2fmt.pl.1p Installing /<>/debian/libgo-perl/usr/share/man/man1/go-filter-subset.pl.1p Installing /<>/debian/libgo-perl/usr/share/man/man1/go-export-prolog.pl.1p Installing /<>/debian/libgo-perl/usr/share/man/man1/map2slim.1p Installing /<>/debian/libgo-perl/usr/share/man/man1/go2error_report.1p Installing /<>/debian/libgo-perl/usr/share/man/man1/go-export-graph.pl.1p Installing /<>/debian/libgo-perl/usr/share/man/man1/go-show-assocs-by-node.pl.1p Installing /<>/debian/libgo-perl/usr/share/man/man1/go-apply-xslt.1p Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::owl_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::IO::Dotty.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::IO::RDFXML.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::summary.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::IO::OBDXML.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::go_def_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::godb_prestore.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::ParserEventNames.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::base.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::ncbi_taxonomy_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::refgenomes_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Utils.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::LogicalDefinition.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::ncbi_taxon_names_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Ontology.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::mgi_assoc_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Species.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Basic.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::owl.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Evidence.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::tbl.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::generic_tagval_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::go_ont.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Restriction.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Seq.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::obo_text.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::locuslink_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::GeneProduct.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::obj.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Modification.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::TreeIterator.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Metadata::Panther.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::obo_text_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::obo_godb_flat.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::go_xref.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::go_assoc_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::DB.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::mesh_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::go_xref_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Path.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Xref.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Term.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::unknown_format_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::ObjFactory.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Association.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::IO::ObanOwl.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::GraphNodeInstance.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::IO::go_assoc.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::obj_emitter.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::go_ont_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::go_def.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::GraphIterator.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::ObjCache.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::owl_to_obo_text.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::xsl_base.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Root.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Property.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::CrossProduct.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::base_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Relationship.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::obo_xml_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::obo_html.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::references_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::IO::Analysis.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::xrf_abbs_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Handlers::text_html.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::IO::Blast.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Model::Graph.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/GO::Parsers::go_ids_parser.3pm Installing /<>/debian/libgo-perl/usr/share/man/man3/go-perl.3pm Installing /<>/debian/libgo-perl/usr/bin/go2summary Installing /<>/debian/libgo-perl/usr/bin/go2fmt.pl Installing /<>/debian/libgo-perl/usr/bin/go2obo_text Installing /<>/debian/libgo-perl/usr/bin/go2obo_html Installing /<>/debian/libgo-perl/usr/bin/go2rdf Installing /<>/debian/libgo-perl/usr/bin/go2error_report Installing /<>/debian/libgo-perl/usr/bin/go2godb_prestore Installing /<>/debian/libgo-perl/usr/bin/go2prolog Installing /<>/debian/libgo-perl/usr/bin/go2rdfxml Installing /<>/debian/libgo-perl/usr/bin/go2obo Installing /<>/debian/libgo-perl/usr/bin/go-show-paths-to-root.pl Installing /<>/debian/libgo-perl/usr/bin/go-apply-xslt Installing /<>/debian/libgo-perl/usr/bin/go2xml Installing /<>/debian/libgo-perl/usr/bin/go2chadoxml Installing /<>/debian/libgo-perl/usr/bin/go-filter-subset.pl Installing /<>/debian/libgo-perl/usr/bin/go2sxpr Installing /<>/debian/libgo-perl/usr/bin/go2pathlist Installing /<>/debian/libgo-perl/usr/bin/go-dag-summary.pl Installing /<>/debian/libgo-perl/usr/bin/map2slim Installing /<>/debian/libgo-perl/usr/bin/go2tbl Installing /<>/debian/libgo-perl/usr/bin/go2text_html Installing /<>/debian/libgo-perl/usr/bin/go2owl Installing /<>/debian/libgo-perl/usr/bin/go2obo_xml Installing /<>/debian/libgo-perl/usr/bin/go-export-graph.pl Installing /<>/debian/libgo-perl/usr/bin/go-show-assocs-by-node.pl Installing /<>/debian/libgo-perl/usr/bin/go-export-prolog.pl make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install prename 's/\.pl//' /<>/debian/libgo-perl/usr/bin/* prename 's/\.pl//' /<>/debian/libgo-perl/usr/share/man/man1/*.pl* make[1]: Leaving directory '/<>' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb INFO: pkgstriptranslations version 143 pkgstriptranslations: processing libgo-perl (in debian/libgo-perl); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libgo-perl/DEBIAN/control, package libgo-perl, directory debian/libgo-perl pkgstripfiles: Truncating usr/share/doc/libgo-perl/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgo-perl ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgo-perl' in '../libgo-perl_0.15-7_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../libgo-perl_0.15-7_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build libgo-perl-0.15 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20181109-1047 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libgo-perl_0.15-7_amd64.changes: -------------------------------- Format: 1.8 Date: Thu, 25 Oct 2018 16:43:21 +0200 Source: libgo-perl Binary: libgo-perl Architecture: all Version: 0.15-7 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: libgo-perl - perl modules for GO and other OBO ontologies Changes: libgo-perl (0.15-7) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.2.1 Checksums-Sha1: 5cd832ca0215cee39691f00a3c63672473394b09 264152 libgo-perl_0.15-7_all.deb c482e9553adb20185d4f5dd3b5bf335d326cf048 6028 libgo-perl_0.15-7_amd64.buildinfo Checksums-Sha256: 99fe7aa66181475567916c32deea5f225371a85a59a9654ca1f9e5d45c24b814 264152 libgo-perl_0.15-7_all.deb 1ea89b4fa7af92ddcfe453e6cb906d61b806589a80a162d10069d9b2235a33e7 6028 libgo-perl_0.15-7_amd64.buildinfo Files: a01400cdd9509c9509fbcfb0c8d92be6 264152 perl optional libgo-perl_0.15-7_all.deb 7d17387a2cdd9b85c62f7114c70c005a 6028 perl optional libgo-perl_0.15-7_amd64.buildinfo +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libgo-perl_0.15-7_all.deb ------------------------- new debian package, version 2.0. size 264152 bytes: control archive=6108 bytes. 948 bytes, 18 lines control 15894 bytes, 213 lines md5sums Package: libgo-perl Version: 0.15-7 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 983 Depends: perl, libdata-stag-perl, libgraphviz-perl, libyaml-perl Recommends: libxml-libxml-perl, libxml-libxslt-perl, libxml-writer-perl, libxml-checker-perl, xsltproc Suggests: bioperl Section: perl Priority: optional Homepage: http://geneontology.sourceforge.net/ Description: perl modules for GO and other OBO ontologies This is a collection of perl code for dealing with Gene Ontologies (GO) and Open Biomedical Ontologies (OBO) style ontologies. It is part of the ‘go-dev’ distribution, but this Debian package is made from the CPAN archive. This package contains both scripts (which can be used with no knowledge of perl), and libraries which will be of use to perl programmers using GO or OBO. drwxr-xr-x root/root 0 2018-10-25 14:43 ./ drwxr-xr-x root/root 0 2018-10-25 14:43 ./usr/ drwxr-xr-x root/root 0 2018-10-25 14:43 ./usr/bin/ -rwxr-xr-x root/root 2679 2018-10-25 14:43 ./usr/bin/go-apply-xslt -rwxr-xr-x root/root 3933 2018-10-25 14:43 ./usr/bin/go-dag-summary -rwxr-xr-x root/root 2086 2018-10-25 14:43 ./usr/bin/go-export-graph -rwxr-xr-x root/root 916 2018-10-25 14:43 ./usr/bin/go-export-prolog -rwxr-xr-x root/root 4590 2018-10-25 14:43 ./usr/bin/go-filter-subset -rwxr-xr-x root/root 2379 2018-10-25 14:43 ./usr/bin/go-show-assocs-by-node -rwxr-xr-x root/root 2961 2018-10-25 14:43 ./usr/bin/go-show-paths-to-root -rwxr-xr-x root/root 111 2018-10-25 14:43 ./usr/bin/go2chadoxml -rwxr-xr-x root/root 728 2018-10-25 14:43 ./usr/bin/go2error_report -rwxr-xr-x root/root 6263 2018-10-25 14:43 ./usr/bin/go2fmt -rwxr-xr-x root/root 72 2018-10-25 14:43 ./usr/bin/go2godb_prestore -rwxr-xr-x root/root 30 2018-10-25 14:43 ./usr/bin/go2obo -rwxr-xr-x root/root 35 2018-10-25 14:43 ./usr/bin/go2obo_html -rwxr-xr-x root/root 35 2018-10-25 14:43 ./usr/bin/go2obo_text -rwxr-xr-x root/root 30 2018-10-25 14:43 ./usr/bin/go2obo_xml -rwxr-xr-x root/root 62 2018-10-25 14:43 ./usr/bin/go2owl -rwxr-xr-x root/root 35 2018-10-25 14:43 ./usr/bin/go2pathlist -rwxr-xr-x root/root 33 2018-10-25 14:43 ./usr/bin/go2prolog -rwxr-xr-x root/root 30 2018-10-25 14:43 ./usr/bin/go2rdf -rwxr-xr-x root/root 30 2018-10-25 14:43 ./usr/bin/go2rdfxml -rwxr-xr-x root/root 34 2018-10-25 14:43 ./usr/bin/go2summary -rwxr-xr-x root/root 31 2018-10-25 14:43 ./usr/bin/go2sxpr -rwxr-xr-x root/root 30 2018-10-25 14:43 ./usr/bin/go2tbl -rwxr-xr-x root/root 36 2018-10-25 14:43 ./usr/bin/go2text_html -rwxr-xr-x root/root 30 2018-10-25 14:43 ./usr/bin/go2xml -rwxr-xr-x root/root 21177 2018-10-25 14:43 ./usr/bin/map2slim drwxr-xr-x root/root 0 2018-10-25 14:43 ./usr/share/ drwxr-xr-x root/root 0 2018-10-25 14:43 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-10-25 14:43 ./usr/share/doc/libgo-perl/ -rw-r--r-- root/root 277 2018-10-25 14:43 ./usr/share/doc/libgo-perl/README.test -rw-r--r-- root/root 1550 2018-10-25 14:43 ./usr/share/doc/libgo-perl/changelog.Debian.gz -rw-r--r-- root/root 989 2018-10-25 14:43 ./usr/share/doc/libgo-perl/copyright drwxr-xr-x root/root 0 2018-10-25 14:43 ./usr/share/man/ drwxr-xr-x root/root 0 2018-10-25 14:43 ./usr/share/man/man1/ -rw-r--r-- root/root 1247 2018-10-25 14:43 ./usr/share/man/man1/go-apply-xslt.1p.gz -rw-r--r-- root/root 1931 2018-10-25 14:43 ./usr/share/man/man1/go-dag-summary.1p.gz -rw-r--r-- root/root 1763 2018-10-25 14:43 ./usr/share/man/man1/go-export-graph.1p.gz -rw-r--r-- root/root 1160 2018-10-25 14:43 ./usr/share/man/man1/go-export-prolog.1p.gz -rw-r--r-- root/root 2302 2018-10-25 14:43 ./usr/share/man/man1/go-filter-subset.1p.gz -rw-r--r-- root/root 1508 2018-10-25 14:43 ./usr/share/man/man1/go-show-assocs-by-node.1p.gz -rw-r--r-- root/root 1902 2018-10-25 14:43 ./usr/share/man/man1/go-show-paths-to-root.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2chadoxml.1p.gz -> go2fmt.1p.gz -rw-r--r-- root/root 1187 2018-10-25 14:43 ./usr/share/man/man1/go2error_report.1p.gz -rw-r--r-- root/root 2952 2018-10-25 14:43 ./usr/share/man/man1/go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2godb_prestore.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2obo.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2obo_html.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2obo_text.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2obo_xml.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2owl.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2pathlist.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2prolog.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2rdf.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2rdfxml.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2summary.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2sxpr.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2tbl.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2text_html.1p.gz -> go2fmt.1p.gz lrwxrwxrwx root/root 0 2018-10-25 14:43 ./usr/share/man/man1/go2xml.1p.gz -> go2fmt.1p.gz -rw-r--r-- root/root 4932 2018-10-25 14:43 ./usr/share/man/man1/map2slim.1p.gz drwxr-xr-x root/root 0 2018-10-25 14:43 ./usr/share/man/man3/ -rw-r--r-- root/root 1261 2018-10-25 14:43 ./usr/share/man/man3/GO::Basic.3pm.gz -rw-r--r-- root/root 1417 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::base.3pm.gz -rw-r--r-- root/root 1180 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::go_def.3pm.gz -rw-r--r-- root/root 1180 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::go_ont.3pm.gz -rw-r--r-- root/root 1181 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::go_xref.3pm.gz -rw-r--r-- root/root 1405 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::godb_prestore.3pm.gz -rw-r--r-- root/root 1486 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::obj.3pm.gz -rw-r--r-- root/root 1262 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::obo_godb_flat.3pm.gz -rw-r--r-- root/root 1188 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::obo_html.3pm.gz -rw-r--r-- root/root 1254 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::obo_text.3pm.gz -rw-r--r-- root/root 1343 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::owl.3pm.gz -rw-r--r-- root/root 1241 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::owl_to_obo_text.3pm.gz -rw-r--r-- root/root 1175 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::summary.3pm.gz -rw-r--r-- root/root 1179 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::tbl.3pm.gz -rw-r--r-- root/root 1187 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::text_html.3pm.gz -rw-r--r-- root/root 1194 2018-10-25 14:43 ./usr/share/man/man3/GO::Handlers::xsl_base.3pm.gz -rw-r--r-- root/root 1328 2018-10-25 14:43 ./usr/share/man/man3/GO::IO::Analysis.3pm.gz -rw-r--r-- root/root 1836 2018-10-25 14:43 ./usr/share/man/man3/GO::IO::Blast.3pm.gz -rw-r--r-- root/root 1270 2018-10-25 14:43 ./usr/share/man/man3/GO::IO::Dotty.3pm.gz -rw-r--r-- root/root 2006 2018-10-25 14:43 ./usr/share/man/man3/GO::IO::OBDXML.3pm.gz -rw-r--r-- root/root 2079 2018-10-25 14:43 ./usr/share/man/man3/GO::IO::ObanOwl.3pm.gz -rw-r--r-- root/root 2078 2018-10-25 14:43 ./usr/share/man/man3/GO::IO::RDFXML.3pm.gz -rw-r--r-- root/root 1838 2018-10-25 14:43 ./usr/share/man/man3/GO::IO::go_assoc.3pm.gz -rw-r--r-- root/root 1948 2018-10-25 14:43 ./usr/share/man/man3/GO::Metadata::Panther.3pm.gz -rw-r--r-- root/root 2066 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Association.3pm.gz -rw-r--r-- root/root 1221 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::CrossProduct.3pm.gz -rw-r--r-- root/root 1188 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::DB.3pm.gz -rw-r--r-- root/root 1929 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Evidence.3pm.gz -rw-r--r-- root/root 1683 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::GeneProduct.3pm.gz -rw-r--r-- root/root 6850 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Graph.3pm.gz -rw-r--r-- root/root 2019 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::GraphIterator.3pm.gz -rw-r--r-- root/root 1445 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::GraphNodeInstance.3pm.gz -rw-r--r-- root/root 1364 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::LogicalDefinition.3pm.gz -rw-r--r-- root/root 1310 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Modification.3pm.gz -rw-r--r-- root/root 1169 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Ontology.3pm.gz -rw-r--r-- root/root 1403 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Path.3pm.gz -rw-r--r-- root/root 1150 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Property.3pm.gz -rw-r--r-- root/root 2098 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Relationship.3pm.gz -rw-r--r-- root/root 1150 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Restriction.3pm.gz -rw-r--r-- root/root 1715 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Root.3pm.gz -rw-r--r-- root/root 1533 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Seq.3pm.gz -rw-r--r-- root/root 1225 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Species.3pm.gz -rw-r--r-- root/root 5055 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::Term.3pm.gz -rw-r--r-- root/root 1582 2018-10-25 14:43 ./usr/share/man/man3/GO::Model::TreeIterator.3pm.gz -rw-r--r-- 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./usr/share/perl5/go-perl.pod +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 11936 Build-Time: 26 Distribution: disco-proposed Host Architecture: amd64 Install-Time: 25 Job: libgo-perl_0.15-7.dsc Machine Architecture: amd64 Package: libgo-perl Package-Time: 53 Source-Version: 0.15-7 Space: 11936 Status: successful Version: 0.15-7 -------------------------------------------------------------------------------- Finished at 20181109-1047 Build needed 00:00:53, 11936k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15630166 Scanning for processes to kill in build PACKAGEBUILD-15630166