libfreecontact-perl 0.08-9build5 source package in Ubuntu
Changelog
libfreecontact-perl (0.08-9build5) noble; urgency=medium * No-change rebuild for CVE-2024-3094 -- William Grant <email address hidden> Mon, 01 Apr 2024 15:52:53 +1100
Upload details
- Uploaded by:
- William Grant
- Uploaded to:
- Noble
- Original maintainer:
- Ubuntu Developers
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Oracular | release | universe | misc | |
| Noble | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| libfreecontact-perl_0.08.orig.tar.gz | 57.3 KiB | 7386762985b9e36ec13379948528f1f18e49cf799ba5436a46aa60e9cb041911 |
| libfreecontact-perl_0.08-9build5.debian.tar.xz | 4.3 KiB | b588cbb96875d669d022181b889ace2f43502f67f3d54d9034bd5e7c46f10327 |
| libfreecontact-perl_0.08-9build5.dsc | 2.2 KiB | 463e730f3101b171ce81296b503a08f2323edd5c00005bb4ab6ad7bab62d5e81 |
Available diffs
- diff from 0.08-9build4 to 0.08-9build5 (533 bytes)
Binary packages built by this source
- libfreecontact-perl: fast protein contact predictor - binding for Perl
FreeContact is a protein residue contact predictor optimized for speed.
Its input is a multiple sequence alignment. FreeContact can function as an
accelerated drop-in for the published contact predictors
EVfold-mfDCA of DS. Marks (2011) and
PSICOV of D. Jones (2011).
.
FreeContact is accelerated by a combination of vector instructions, multiple
threads, and faster implementation of key parts.
Depending on the alignment, 8-fold or higher speedups are possible.
.
A sufficiently large alignment is required for meaningful results.
As a minimum, an alignment with an effective (after-weighting) sequence count
bigger than the length of the query sequence should be used. Alignments with
tens of thousands of (effective) sequences are considered good input.
.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
can be used to generate the alignments, for example.
.
This package contains the Perl binding.
- libfreecontact-perl-dbgsym: debug symbols for libfreecontact-perl
