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libfreecontact-perl package

libfreecontact-perl 0.08-9build2 source package in Ubuntu

Changelog

libfreecontact-perl (0.08-9build2) lunar; urgency=medium

  * Rebuild against new perlapi-5.36.

 -- Gianfranco Costamagna <email address hidden>  Fri, 04 Nov 2022 16:32:43 +0100

Upload details

Uploaded by:
Gianfranco Costamagna
Uploaded to:
Lunar
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Mantic release universe misc
Lunar release universe misc

Downloads

File Size SHA-256 Checksum
libfreecontact-perl_0.08.orig.tar.gz 57.3 KiB 7386762985b9e36ec13379948528f1f18e49cf799ba5436a46aa60e9cb041911
libfreecontact-perl_0.08-9build2.debian.tar.xz 4.2 KiB b929f3a37f8fcd6cbf769848450d2d40083a23f945e0888c499ed69d5682ca1c
libfreecontact-perl_0.08-9build2.dsc 2.1 KiB 2801e52e62eef6dd47282e4cfe1920c3953013ca484af077e21cbd207e32f316

Available diffs

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Binary packages built by this source

libfreecontact-perl: fast protein contact predictor - binding for Perl

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains the Perl binding.

libfreecontact-perl-dbgsym: debug symbols for libfreecontact-perl