libfreecontact-perl 0.08-9 source package in Ubuntu
Changelog
libfreecontact-perl (0.08-9) unstable; urgency=medium * Upstream download vanished * Standards-Version: 4.6.0 (routine-update) * Add missing build dependency on dh addon. -- Andreas Tille <email address hidden> Wed, 19 Jan 2022 21:31:25 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| libfreecontact-perl_0.08-9.dsc | 2.1 KiB | 642b566874e9232ab0baba88e4d1f4dc520b5793dbc0f49dd0f15dcb1a6bf85c |
| libfreecontact-perl_0.08.orig.tar.gz | 57.3 KiB | 7386762985b9e36ec13379948528f1f18e49cf799ba5436a46aa60e9cb041911 |
| libfreecontact-perl_0.08-9.debian.tar.xz | 4.1 KiB | 7264029a96308f34c90fc201b3b7ee6f75cd12f5412f34b57098cb32ab6fdea5 |
Available diffs
- diff from 0.08-8 to 0.08-9 (730 bytes)
No changes file available.
Binary packages built by this source
- libfreecontact-perl: fast protein contact predictor - binding for Perl
FreeContact is a protein residue contact predictor optimized for speed.
Its input is a multiple sequence alignment. FreeContact can function as an
accelerated drop-in for the published contact predictors
EVfold-mfDCA of DS. Marks (2011) and
PSICOV of D. Jones (2011).
.
FreeContact is accelerated by a combination of vector instructions, multiple
threads, and faster implementation of key parts.
Depending on the alignment, 8-fold or higher speedups are possible.
.
A sufficiently large alignment is required for meaningful results.
As a minimum, an alignment with an effective (after-weighting) sequence count
bigger than the length of the query sequence should be used. Alignments with
tens of thousands of (effective) sequences are considered good input.
.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
can be used to generate the alignments, for example.
.
This package contains the Perl binding.
- libfreecontact-perl-dbgsym: debug symbols for libfreecontact-perl
