libfastahack 1.0.0+dfsg-11 source package in Ubuntu
Changelog
libfastahack (1.0.0+dfsg-11) unstable; urgency=medium * d/libfastahack0.symbols: mark optional symbols. The compiler is leaking a certain number of functions to the library's symbols table. They are variable depending on compiler version, and build options such as link time optimization tend to clean them up, but in both cases this tends to interfere with the existing list. (Closes: #1015486) * autoconf.patch: mark forwarding unneeded. * d/control: declare compliance to standards version 4.6.2. -- Étienne Mollier <email address hidden> Tue, 05 Dec 2023 16:59:42 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Oracular | release | universe | misc | |
Noble | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
libfastahack_1.0.0+dfsg-11.dsc | 2.3 KiB | 783b03887c6f003ece983e6dbcb99e608be9549367e141446a1b38973afb0b77 |
libfastahack_1.0.0+dfsg.orig.tar.xz | 8.9 KiB | 41e512b34158564ae83355a1e11a5ae366f3ca9ac4a31ef80f3f26f3438a91af |
libfastahack_1.0.0+dfsg-11.debian.tar.xz | 7.4 KiB | aec68f5790fe2b9b7ac7557b1182987bf1a3a61b9f24bba99d6f7a5a5270ce23 |
Available diffs
- diff from 1.0.0+dfsg-10 to 1.0.0+dfsg-11 (1.7 KiB)
No changes file available.
Binary packages built by this source
- fastahack: utility for indexing and sequence extraction from FASTA files
fastahack is a small application for indexing and extracting sequences and
subsequences from FASTA files. The included Fasta.cpp library provides a FASTA
reader and indexer that can be embedded into applications which would benefit
from directly reading subsequences from FASTA files. The library automatically
handles index file generation and use.
.
Features:
* FASTA index (.fai) generation for FASTA files
* Sequence extraction
* Subsequence extraction
* Sequence statistics (currently only entropy is provided)
.
Sequence and subsequence extraction use fseek64 to provide fastest-possible
extraction without RAM-intensive file loading operations. This makes fastahack
a useful tool for bioinformaticists who need to quickly extract many
subsequences from a reference FASTA sequence.
- fastahack-dbgsym: debug symbols for fastahack
- libfastahack-dev: library for indexing and sequence extraction from FASTA files (devel)
fastahack is a small application for indexing and extracting sequences and
subsequences from FASTA files. The included Fasta.cpp library provides a FASTA
reader and indexer that can be embedded into applications which would benefit
from directly reading subsequences from FASTA files. The library automatically
handles index file generation and use.
.
Features:
* FASTA index (.fai) generation for FASTA files
* Sequence extraction
* Subsequence extraction
* Sequence statistics (currently only entropy is provided)
.
Sequence and subsequence extraction use fseek64 to provide fastest-possible
extraction without RAM-intensive file loading operations. This makes fastahack
a useful tool for bioinformaticists who need to quickly extract many
subsequences from a reference FASTA sequence.
.
This is the development package containing the statically linked
library and the header files.
- libfastahack0: library for indexing and sequence extraction from FASTA files (lib)
fastahack is a small application for indexing and extracting sequences and
subsequences from FASTA files. The included Fasta.cpp library provides a FASTA
reader and indexer that can be embedded into applications which would benefit
from directly reading subsequences from FASTA files. The library automatically
handles index file generation and use.
.
Features:
* FASTA index (.fai) generation for FASTA files
* Sequence extraction
* Subsequence extraction
* Sequence statistics (currently only entropy is provided)
.
Sequence and subsequence extraction use fseek64 to provide fastest-possible
extraction without RAM-intensive file loading operations. This makes fastahack
a useful tool for bioinformaticists who need to quickly extract many
subsequences from a reference FASTA sequence.
.
This package contains the dynamic library.
- libfastahack0-dbgsym: debug symbols for libfastahack0