RUN: /usr/share/launchpad-buildd/slavebin/slave-prep 
Forking launchpad-buildd slave process...
Kernel version: Linux lgw01-amd64-029 4.4.0-97-generic #120-Ubuntu SMP Tue Sep 19 17:28:18 UTC 2017 x86_64
Buildd toolchain package versions: launchpad-buildd_154 python-lpbuildd_154 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.3 dpkg-dev_1.18.4ubuntu1.2 python-debian_0.1.27ubuntu2.
Syncing the system clock with the buildd NTP service...
 3 Nov 05:46:03 ntpdate[1785]: adjust time server 10.211.37.1 offset -0.000003 sec
RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-13667868 /home/buildd/filecache-default/f027e517e95d0e91684230ee23be60d709f816c0
Creating target for build PACKAGEBUILD-13667868
RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-13667868
Starting target for build PACKAGEBUILD-13667868
RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-13667868 'deb http://ftpmaster.internal/ubuntu bionic main universe' 'deb http://ftpmaster.internal/ubuntu bionic-security main universe' 'deb http://ftpmaster.internal/ubuntu bionic-updates main universe' 'deb http://ftpmaster.internal/ubuntu bionic-proposed main universe'
Overriding sources.list in build-PACKAGEBUILD-13667868
RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-13667868
Updating target for build PACKAGEBUILD-13667868
Get:1 http://ftpmaster.internal/ubuntu bionic InRelease [235 kB]
Get:2 http://ftpmaster.internal/ubuntu bionic-security InRelease [65.4 kB]
Get:3 http://ftpmaster.internal/ubuntu bionic-updates InRelease [65.4 kB]
Get:4 http://ftpmaster.internal/ubuntu bionic-proposed InRelease [85.4 kB]
Get:5 http://ftpmaster.internal/ubuntu bionic/main amd64 Packages [1064 kB]
Get:6 http://ftpmaster.internal/ubuntu bionic/main Translation-en [541 kB]
Get:7 http://ftpmaster.internal/ubuntu bionic/universe amd64 Packages [8127 kB]
Get:8 http://ftpmaster.internal/ubuntu bionic/universe Translation-en [4799 kB]
Get:9 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 Packages [118 kB]
Get:10 http://ftpmaster.internal/ubuntu bionic-proposed/main Translation-en [69.6 kB]
Get:11 http://ftpmaster.internal/ubuntu bionic-proposed/universe amd64 Packages [562 kB]
Get:12 http://ftpmaster.internal/ubuntu bionic-proposed/universe Translation-en [456 kB]
Fetched 16.2 MB in 3s (4359 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages were automatically installed and are no longer required:
  libasn1-8-heimdal libcurl3-gnutls libgssapi-krb5-2 libgssapi3-heimdal
  libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal
  libhx509-5-heimdal libidn2-0 libk5crypto3 libkeyutils1 libkrb5-26-heimdal
  libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libpsl5
  libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libunistring0
  libustr-1.0-1 libwind0-heimdal
Use 'sudo apt autoremove' to remove them.
The following packages will be REMOVED:
  apt-transport-https*
The following packages will be upgraded:
  apt base-files base-passwd binutils binutils-common
  binutils-x86-64-linux-gnu build-essential coreutils cpp-7 debconf dpkg
  dpkg-dev e2fslibs e2fsprogs g++-7 gcc-7 gcc-7-base gnupg gnupg-agent gpgv
  libapparmor1 libapt-pkg5.0 libasan4 libatomic1 libbinutils libc-bin
  libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcilkrts5
  libcomerr2 libcurl3-gnutls libdpkg-perl libgcc-7-dev libgcc1 libgcrypt20
  libgmp10 libgomp1 libgpg-error0 libgssapi-krb5-2 libhogweed4 libitm1
  libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblsan0 libmpx2
  libnettle6 libp11-kit0 libpcre3 libperl5.26 libpng16-16 libpsl5 libquadmath0
  libseccomp2 libselinux1 libsemanage-common libsemanage1 libsqlite3-0 libss2
  libstdc++-7-dev libstdc++6 libsystemd0 libtsan0 libubsan0 libudev1
  linux-libc-dev multiarch-support perl perl-base perl-modules-5.26
  pinentry-curses systemd systemd-sysv sysvinit-utils tzdata
80 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
Need to get 58.1 MB of archives.
After this operation, 452 kB of additional disk space will be used.
Get:1 http://ftpmaster.internal/ubuntu bionic/main amd64 base-files amd64 10ubuntu1 [55.9 kB]
Get:2 http://ftpmaster.internal/ubuntu bionic/main amd64 coreutils amd64 8.26-3ubuntu4 [1213 kB]
Get:3 http://ftpmaster.internal/ubuntu bionic/main amd64 dpkg amd64 1.19.0.4ubuntu1 [1145 kB]
Get:4 http://ftpmaster.internal/ubuntu bionic/main amd64 libc6-dev amd64 2.26-0ubuntu2 [2524 kB]
Get:5 http://ftpmaster.internal/ubuntu bionic/main amd64 libc-dev-bin amd64 2.26-0ubuntu2 [69.6 kB]
Get:6 http://ftpmaster.internal/ubuntu bionic/main amd64 linux-libc-dev amd64 4.13.0-16.19 [954 kB]
Get:7 http://ftpmaster.internal/ubuntu bionic/main amd64 libquadmath0 amd64 7.2.0-12ubuntu1 [132 kB]
Get:8 http://ftpmaster.internal/ubuntu bionic/main amd64 libitm1 amd64 7.2.0-12ubuntu1 [27.6 kB]
Get:9 http://ftpmaster.internal/ubuntu bionic/main amd64 gcc-7-base amd64 7.2.0-12ubuntu1 [18.3 kB]
Get:10 http://ftpmaster.internal/ubuntu bionic/main amd64 libgcc1 amd64 1:7.2.0-12ubuntu1 [39.3 kB]
Get:11 http://ftpmaster.internal/ubuntu bionic/main amd64 libmpx2 amd64 7.2.0-12ubuntu1 [11.7 kB]
Get:12 http://ftpmaster.internal/ubuntu bionic/main amd64 libgomp1 amd64 7.2.0-12ubuntu1 [76.4 kB]
Get:13 http://ftpmaster.internal/ubuntu bionic/main amd64 libatomic1 amd64 7.2.0-12ubuntu1 [8954 B]
Get:14 http://ftpmaster.internal/ubuntu bionic/main amd64 libasan4 amd64 7.2.0-12ubuntu1 [360 kB]
Get:15 http://ftpmaster.internal/ubuntu bionic/main amd64 liblsan0 amd64 7.2.0-12ubuntu1 [133 kB]
Get:16 http://ftpmaster.internal/ubuntu bionic/main amd64 libtsan0 amd64 7.2.0-12ubuntu1 [282 kB]
Get:17 http://ftpmaster.internal/ubuntu bionic/main amd64 libubsan0 amd64 7.2.0-12ubuntu1 [126 kB]
Get:18 http://ftpmaster.internal/ubuntu bionic/main amd64 libcilkrts5 amd64 7.2.0-12ubuntu1 [42.5 kB]
Get:19 http://ftpmaster.internal/ubuntu bionic/main amd64 cpp-7 amd64 7.2.0-12ubuntu1 [6728 kB]
Get:20 http://ftpmaster.internal/ubuntu bionic/main amd64 libcc1-0 amd64 7.2.0-12ubuntu1 [38.7 kB]
Get:21 http://ftpmaster.internal/ubuntu bionic/main amd64 g++-7 amd64 7.2.0-12ubuntu1 [7554 kB]
Get:22 http://ftpmaster.internal/ubuntu bionic/main amd64 gcc-7 amd64 7.2.0-12ubuntu1 [7414 kB]
Get:23 http://ftpmaster.internal/ubuntu bionic/main amd64 libgcc-7-dev amd64 7.2.0-12ubuntu1 [2377 kB]
Get:24 http://ftpmaster.internal/ubuntu bionic/main amd64 libstdc++-7-dev amd64 7.2.0-12ubuntu1 [1457 kB]
Get:25 http://ftpmaster.internal/ubuntu bionic/main amd64 libstdc++6 amd64 7.2.0-12ubuntu1 [405 kB]
Get:26 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgmp10 amd64 2:6.1.2+dfsg-1.1 [241 kB]
Get:27 http://ftpmaster.internal/ubuntu bionic/main amd64 libbinutils amd64 2.29.1-6ubuntu1 [502 kB]
Get:28 http://ftpmaster.internal/ubuntu bionic/main amd64 binutils amd64 2.29.1-6ubuntu1 [3344 B]
Get:29 http://ftpmaster.internal/ubuntu bionic/main amd64 binutils-common amd64 2.29.1-6ubuntu1 [190 kB]
Get:30 http://ftpmaster.internal/ubuntu bionic/main amd64 binutils-x86-64-linux-gnu amd64 2.29.1-6ubuntu1 [1825 kB]
Get:31 http://ftpmaster.internal/ubuntu bionic/main amd64 libc6 amd64 2.26-0ubuntu2 [2778 kB]
Get:32 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 e2fslibs amd64 1.43.7-1 [157 kB]
Get:33 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 e2fsprogs amd64 1.43.7-1 [498 kB]
Get:34 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 perl-modules-5.26 all 5.26.1-2ubuntu1 [2760 kB]
Get:35 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libperl5.26 amd64 5.26.1-2ubuntu1 [3535 kB]
Get:36 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 perl amd64 5.26.1-2ubuntu1 [201 kB]
Get:37 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 perl-base amd64 5.26.1-2ubuntu1 [1389 kB]
Get:38 http://ftpmaster.internal/ubuntu bionic/main amd64 base-passwd amd64 3.5.44 [47.2 kB]
Get:39 http://ftpmaster.internal/ubuntu bionic/main amd64 libc-bin amd64 2.26-0ubuntu2 [593 kB]
Get:40 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 sysvinit-utils amd64 2.88dsf-59.10ubuntu1 [18.6 kB]
Get:41 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libudev1 amd64 235-2ubuntu1 [54.5 kB]
Get:42 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libapt-pkg5.0 amd64 1.6~alpha3 [779 kB]
Get:43 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgpg-error0 amd64 1.27-4 [36.8 kB]
Get:44 http://ftpmaster.internal/ubuntu bionic/main amd64 libgcrypt20 amd64 1.7.9-1 [400 kB]
Get:45 http://ftpmaster.internal/ubuntu bionic/main amd64 gpgv amd64 2.1.15-1ubuntu8 [186 kB]
Get:46 http://ftpmaster.internal/ubuntu bionic/main amd64 libseccomp2 amd64 2.3.1-2.1ubuntu3 [37.3 kB]
Get:47 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 apt amd64 1.6~alpha3 [1144 kB]
Get:48 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 debconf all 1.5.64 [124 kB]
Get:49 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libapparmor1 amd64 2.11.0-2ubuntu18 [28.8 kB]
Get:50 http://ftpmaster.internal/ubuntu bionic/main amd64 libcap2 amd64 1:2.25-1.1 [13.2 kB]
Get:51 http://ftpmaster.internal/ubuntu bionic/main amd64 libpcre3 amd64 2:8.39-5ubuntu3 [229 kB]
Get:52 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libselinux1 amd64 2.7-2 [68.3 kB]
Get:53 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 systemd amd64 235-2ubuntu1 [2832 kB]
Get:54 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libsystemd0 amd64 235-2ubuntu1 [196 kB]
Get:55 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 systemd-sysv amd64 235-2ubuntu1 [12.7 kB]
Get:56 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libcap-ng0 amd64 0.7.7-3.1 [11.1 kB]
Get:57 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libcomerr2 amd64 1.43.7-1 [11.4 kB]
Get:58 http://ftpmaster.internal/ubuntu bionic/main amd64 libsemanage-common all 2.7-2 [6916 B]
Get:59 http://ftpmaster.internal/ubuntu bionic/main amd64 libsemanage1 amd64 2.7-2 [84.6 kB]
Get:60 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libss2 amd64 1.43.7-1 [11.1 kB]
Get:61 http://ftpmaster.internal/ubuntu bionic/main amd64 libnettle6 amd64 3.3-2 [91.7 kB]
Get:62 http://ftpmaster.internal/ubuntu bionic/main amd64 libhogweed4 amd64 3.3-2 [135 kB]
Get:63 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libp11-kit0 amd64 0.23.9-2 [187 kB]
Get:64 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 pinentry-curses amd64 1.0.0-3 [34.7 kB]
Get:65 http://ftpmaster.internal/ubuntu bionic/main amd64 gnupg amd64 2.1.15-1ubuntu8 [780 kB]
Get:66 http://ftpmaster.internal/ubuntu bionic/main amd64 gnupg-agent amd64 2.1.15-1ubuntu8 [255 kB]
Get:67 http://ftpmaster.internal/ubuntu bionic/main amd64 libsqlite3-0 amd64 3.20.1-2 [491 kB]
Get:68 http://ftpmaster.internal/ubuntu bionic/main amd64 multiarch-support amd64 2.26-0ubuntu2 [6832 B]
Get:69 http://ftpmaster.internal/ubuntu bionic/main amd64 tzdata all 2017c-1 [188 kB]
Get:70 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgssapi-krb5-2 amd64 1.15.2-2 [121 kB]
Get:71 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libkrb5-3 amd64 1.15.2-2 [278 kB]
Get:72 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libkrb5support0 amd64 1.15.2-2 [31.5 kB]
Get:73 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libk5crypto3 amd64 1.15.2-2 [85.4 kB]
Get:74 http://ftpmaster.internal/ubuntu bionic/main amd64 libkeyutils1 amd64 1.5.9-9.1ubuntu1 [9488 B]
Get:75 http://ftpmaster.internal/ubuntu bionic/main amd64 libpng16-16 amd64 1.6.34-1 [176 kB]
Get:76 http://ftpmaster.internal/ubuntu bionic/main amd64 dpkg-dev all 1.19.0.4ubuntu1 [607 kB]
Get:77 http://ftpmaster.internal/ubuntu bionic/main amd64 libdpkg-perl all 1.19.0.4ubuntu1 [211 kB]
Get:78 http://ftpmaster.internal/ubuntu bionic/main amd64 build-essential amd64 12.4ubuntu1 [4758 B]
Get:79 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libpsl5 amd64 0.18.0-4 [40.7 kB]
Get:80 http://ftpmaster.internal/ubuntu bionic/main amd64 libcurl3-gnutls amd64 7.55.1-1ubuntu2.1 [193 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Installing new version of config file /etc/logrotate.d/dpkg ...
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RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-13667868 amd64 bionic-proposed -c chroot:build-PACKAGEBUILD-13667868 --arch=amd64 --dist=bionic-proposed --nolog -A libbio-samtools-perl_1.43-1build3.dsc
Initiating build PACKAGEBUILD-13667868 with 4 jobs across 4 processor cores.
Kernel reported to sbuild: 4.4.0-97-generic #120-Ubuntu SMP Tue Sep 19 17:28:18 UTC 2017 x86_64
sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-029.buildd

+==============================================================================+
| libbio-samtools-perl 1.43-1build3 (amd64)                  03 Nov 2017 05:46 |
+==============================================================================+

Package: libbio-samtools-perl
Version: 1.43-1build3
Source Version: 1.43-1build3
Distribution: bionic-proposed
Machine Architecture: amd64
Host Architecture: amd64
Build Architecture: amd64

I: NOTICE: Log filtering will replace 'build/libbio-samtools-perl-cnW33f/libbio-samtools-perl-1.43' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libbio-samtools-perl-cnW33f' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-13667868/chroot-autobuild' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Local sources
-------------

libbio-samtools-perl_1.43-1build3.dsc exists in .; copying to chroot

Check architectures
-------------------


Check dependencies
------------------

Merged Build-Depends: build-essential, fakeroot
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+------------------------------------------------------------------------------+
| Install core build dependencies (apt-based resolver)                         |
+------------------------------------------------------------------------------+

Installing build dependencies
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Reading state information...
The following packages were automatically installed and are no longer required:
  libasn1-8-heimdal libcurl3-gnutls libgssapi-krb5-2 libgssapi3-heimdal
  libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal
  libhx509-5-heimdal libidn2-0 libk5crypto3 libkeyutils1 libkrb5-26-heimdal
  libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libpsl5
  libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libunistring0
  libustr-1.0-1 libwind0-heimdal
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
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Merged Build-Depends: debhelper (>= 9.20120312~), perl, libmodule-build-perl, zlib1g-dev, libbam-dev (>= 0.1.16-1~), libbio-perl-perl
Filtered Build-Depends: debhelper (>= 9.20120312~), perl, libmodule-build-perl, zlib1g-dev, libbam-dev (>= 0.1.16-1~), libbio-perl-perl
dpkg-deb: building package 'sbuild-build-depends-libbio-samtools-perl-dummy' in '/<<BUILDDIR>>/resolver-c0tDeC/apt_archive/sbuild-build-depends-libbio-samtools-perl-dummy.deb'.
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Reading package lists...

+------------------------------------------------------------------------------+
| Install libbio-samtools-perl build dependencies (apt-based resolver)         |
+------------------------------------------------------------------------------+

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libasn1-8-heimdal libcurl3-gnutls libgssapi-krb5-2 libgssapi3-heimdal
  libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal
  libhx509-5-heimdal libidn2-0 libk5crypto3 libkeyutils1 libkrb5-26-heimdal
  libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libpsl5
  libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libustr-1.0-1
  libwind0-heimdal
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
  intltool-debian libarchive-zip-perl libbam-dev libbio-perl-perl libbsd0
  libcroco3 libdata-stag-perl libfile-stripnondeterminism-perl libglib2.0-0
  libicu59 libio-string-perl libmagic-mgc libmagic1 libmodule-build-perl
  libpipeline1 libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db
  po-debconf zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff
  bioperl libxml-sax-expatxs-perl libtool-doc gfortran | fortran95-compiler
  gcj-jdk m4-doc less www-browser libmail-box-perl
Recommended packages:
  curl | wget | lynx-cur bioperl-run | libbio-perl-run-perl libace-perl
  libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl
  libclone-perl libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl
  libdbd-pg-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-parser-perl
  libhtml-tableextract-perl liblist-moreutils-perl libpostscript-perl
  libset-scalar-perl libsoap-lite-perl libsort-naturally-perl
  libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl
  libsvg-graph-perl liburi-perl libxml-dom-xpath-perl libxml-parser-perl
  libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl
  libxml-writer-perl libxml-libxml-perl libwww-perl perl-tk libgd-gd2-perl
  | libgd-gd2-noxpm-perl libxml-libxslt-perl libmldbm-perl libxml-perl
  libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs
  libmodule-signature-perl libpod-readme-perl libsoftware-license-perl
  libltdl-dev libmail-sendmail-perl
The following packages will be REMOVED:
  pkg-create-dbgsym*
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
  intltool-debian libarchive-zip-perl libbam-dev libbio-perl-perl libbsd0
  libcroco3 libdata-stag-perl libfile-stripnondeterminism-perl libglib2.0-0
  libicu59 libio-string-perl libmagic-mgc libmagic1 libmodule-build-perl
  libpipeline1 libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db
  po-debconf sbuild-build-depends-libbio-samtools-perl-dummy zlib1g-dev
0 upgraded, 36 newly installed, 1 to remove and 0 not upgraded.
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After this operation, 79.3 MB of additional disk space will be used.
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Get:2 http://ftpmaster.internal/ubuntu bionic/main amd64 groff-base amd64 1.22.3-9 [1144 kB]
Get:3 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libbsd0 amd64 0.8.6-2 [41.8 kB]
Get:4 http://ftpmaster.internal/ubuntu bionic/main amd64 bsdmainutils amd64 9.0.12+nmu1ubuntu1 [179 kB]
Get:5 http://ftpmaster.internal/ubuntu bionic/main amd64 libpipeline1 amd64 1.4.2-1 [25.2 kB]
Get:6 http://ftpmaster.internal/ubuntu bionic/main amd64 man-db amd64 2.7.6.1-2 [895 kB]
Get:7 http://ftpmaster.internal/ubuntu bionic/main amd64 libmagic-mgc amd64 1:5.32-1 [184 kB]
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Get:9 http://ftpmaster.internal/ubuntu bionic/main amd64 file amd64 1:5.32-1 [22.0 kB]
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Get:14 http://ftpmaster.internal/ubuntu bionic/main amd64 libsigsegv2 amd64 2.11-1 [13.2 kB]
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Get:16 http://ftpmaster.internal/ubuntu bionic/main amd64 autoconf all 2.69-11 [322 kB]
Get:17 http://ftpmaster.internal/ubuntu bionic/main amd64 autotools-dev all 20161112.1+nmu1 [40.2 kB]
Get:18 http://ftpmaster.internal/ubuntu bionic/main amd64 automake all 1:1.15.1-3ubuntu1 [509 kB]
Get:19 http://ftpmaster.internal/ubuntu bionic/main amd64 autopoint all 0.19.8.1-4ubuntu1 [412 kB]
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Get:31 http://ftpmaster.internal/ubuntu bionic/universe amd64 libbam-dev amd64 0.1.19-2 [124 kB]
Get:32 http://ftpmaster.internal/ubuntu bionic/main amd64 libio-string-perl all 1.08-3 [11.1 kB]
Get:33 http://ftpmaster.internal/ubuntu bionic/universe amd64 libdata-stag-perl all 0.14-1ubuntu2 [366 kB]
Get:34 http://ftpmaster.internal/ubuntu bionic/universe amd64 libbio-perl-perl all 1.7.1-3 [4558 kB]
Get:35 http://ftpmaster.internal/ubuntu bionic/universe amd64 libmodule-build-perl all 0.422400-1 [201 kB]
Get:36 http://ftpmaster.internal/ubuntu bionic/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-0ubuntu2 [176 kB]
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+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.4.0-97-generic amd64 (x86_64)
Toolchain package versions: binutils_2.29.1-6ubuntu1 dpkg-dev_1.19.0.4ubuntu1 g++-7_7.2.0-12ubuntu1 gcc-7_7.2.0-12ubuntu1 libc6-dev_2.26-0ubuntu2 libstdc++-7-dev_7.2.0-12ubuntu1 libstdc++6_7.2.0-12ubuntu1 linux-libc-dev_4.13.0-16.19
Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_2.0-1 apt_1.6~alpha3 autoconf_2.69-11 automake_1:1.15.1-3ubuntu1 autopoint_0.19.8.1-4ubuntu1 autotools-dev_20161112.1+nmu1 base-files_10ubuntu1 base-passwd_3.5.44 bash_4.4-5ubuntu1 binutils_2.29.1-6ubuntu1 binutils-common_2.29.1-6ubuntu1 binutils-x86-64-linux-gnu_2.29.1-6ubuntu1 bsdmainutils_9.0.12+nmu1ubuntu1 bsdutils_1:2.30.1-0ubuntu4 build-essential_12.4ubuntu1 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.26-3ubuntu4 cpp_4:7.2.0-1ubuntu1 cpp-7_7.2.0-12ubuntu1 dash_0.5.8-2.3ubuntu1 debconf_1.5.64 debhelper_10.10.5ubuntu1 debianutils_4.8.2 dh-autoreconf_14 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dmsetup_2:1.02.137-2ubuntu3 dpkg_1.19.0.4ubuntu1 dpkg-dev_1.19.0.4ubuntu1 e2fslibs_1.43.7-1 e2fsprogs_1.43.7-1 fakeroot_1.21-1ubuntu2 fdisk_2.30.1-0ubuntu4 file_1:5.32-1 findutils_4.6.0+git+20170729-2 g++_4:7.2.0-1ubuntu1 g++-7_7.2.0-12ubuntu1 gcc_4:7.2.0-1ubuntu1 gcc-7_7.2.0-12ubuntu1 gcc-7-base_7.2.0-12ubuntu1 gettext_0.19.8.1-4ubuntu1 gettext-base_0.19.8.1-4ubuntu1 gnupg_2.1.15-1ubuntu8 gnupg-agent_2.1.15-1ubuntu8 gpgv_2.1.15-1ubuntu8 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5ubuntu1 hostname_3.18 init_1.49ubuntu1 init-system-helpers_1.49ubuntu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.11.0-2ubuntu18 libapt-pkg5.0_1.6~alpha3 libarchive-zip-perl_1.59-1 libasan4_7.2.0-12ubuntu1 libasn1-8-heimdal_7.4.0.dfsg.1-2 libassuan0_2.4.3-3 libatomic1_7.2.0-12ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.7.7-1ubuntu2 libaudit1_1:2.7.7-1ubuntu2 libbam-dev_0.1.19-2 libbinutils_2.29.1-6ubuntu1 libbio-perl-perl_1.7.1-3 libblkid1_2.30.1-0ubuntu4 libbsd0_0.8.6-2 libbz2-1.0_1.0.6-8.1 libc-bin_2.26-0ubuntu2 libc-dev-bin_2.26-0ubuntu2 libc6_2.26-0ubuntu2 libc6-dev_2.26-0ubuntu2 libcap-ng0_0.7.7-3.1 libcap2_1:2.25-1.1 libcc1-0_7.2.0-12ubuntu1 libcilkrts5_7.2.0-12ubuntu1 libcomerr2_1.43.7-1 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.3-4ubuntu1 libcurl3-gnutls_7.55.1-1ubuntu2.1 libdata-stag-perl_0.14-1ubuntu2 libdb5.3_5.3.28-13.1 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.137-2ubuntu3 libdpkg-perl_1.19.0.4ubuntu1 libfakeroot_1.21-1ubuntu2 libfdisk1_2.30.1-0ubuntu4 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.040-1 libgcc-7-dev_7.2.0-12ubuntu1 libgcc1_1:7.2.0-12ubuntu1 libgcrypt20_1.7.9-1 libgdbm3_1.8.3-14 libglib2.0-0_2.54.1-1ubuntu1 libgmp10_2:6.1.2+dfsg-1.1 libgnutls30_3.5.8-6ubuntu3 libgomp1_7.2.0-12ubuntu1 libgpg-error0_1.27-4 libgssapi-krb5-2_1.15.2-2 libgssapi3-heimdal_7.4.0.dfsg.1-2 libhcrypto4-heimdal_7.4.0.dfsg.1-2 libheimbase1-heimdal_7.4.0.dfsg.1-2 libheimntlm0-heimdal_7.4.0.dfsg.1-2 libhogweed4_3.3-2 libhx509-5-heimdal_7.4.0.dfsg.1-2 libicu59_59.1-3ubuntu1 libidn11_1.33-2 libidn2-0_2.0.2-5 libio-string-perl_1.08-3 libip4tc0_1.6.1-2ubuntu1 libisl15_0.18-1 libitm1_7.2.0-12ubuntu1 libk5crypto3_1.15.2-2 libkeyutils1_1.5.9-9.1ubuntu1 libkmod2_24-1ubuntu2 libkrb5-26-heimdal_7.4.0.dfsg.1-2 libkrb5-3_1.15.2-2 libkrb5support0_1.15.2-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1ubuntu1 libldap-common_2.4.45+dfsg-1ubuntu1 liblockfile-bin_1.14-1 liblockfile1_1.14-1 liblsan0_7.2.0-12ubuntu1 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmodule-build-perl_0.422400-1 libmount1_2.30.1-0ubuntu4 libmpc3_1.0.3-2 libmpfr4_3.1.6-1 libmpx2_7.2.0-12ubuntu1 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.3-2 libnpth0_1.5-2 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.2ubuntu3 libpam-modules-bin_1.1.8-3.2ubuntu3 libpam-runtime_1.1.8-3.2ubuntu3 libpam0g_1.1.8-3.2ubuntu3 libpcre3_2:8.39-5ubuntu3 libperl5.26_5.26.1-2ubuntu1 libpipeline1_1.4.2-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-1ubuntu2 libpsl5_0.18.0-4 libquadmath0_7.2.0-12ubuntu1 libreadline7_7.0-0ubuntu2 libroken18-heimdal_7.4.0.dfsg.1-2 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3ubuntu1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3ubuntu1 libseccomp2_2.3.1-2.1ubuntu3 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.11-1 libslang2_2.3.1-5ubuntu1 libsmartcols1_2.30.1-0ubuntu4 libsqlite3-0_3.20.1-2 libss2_1.43.7-1 libssl1.0.0_1.0.2g-1ubuntu13 libstdc++-7-dev_7.2.0-12ubuntu1 libstdc++6_7.2.0-12ubuntu1 libsystemd0_235-2ubuntu1 libtasn1-6_4.12-2.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-2 libtsan0_7.2.0-12ubuntu1 libubsan0_7.2.0-12ubuntu1 libudev1_235-2ubuntu1 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-31 libustr-1.0-1_1.0.4-6 libuuid1_2.30.1-0ubuntu4 libwind0-heimdal_7.4.0.dfsg.1-2 libxml2_2.9.4+dfsg1-5ubuntu1 linux-libc-dev_4.13.0-16.19 lockfile-progs_0.1.17build1 login_1:4.2-3.2ubuntu4 lsb-base_9.20160110ubuntu5 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17ubuntu2 mount_2.30.1-0ubuntu4 multiarch-support_2.26-0ubuntu2 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 openssl_1.0.2g-1ubuntu13 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu4 patch_2.7.5-1build1 perl_5.26.1-2ubuntu1 perl-base_5.26.1-2ubuntu1 perl-modules-5.26_5.26.1-2ubuntu1 pinentry-curses_1.0.0-3 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libbio-samtools-perl-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 systemd_235-2ubuntu1 systemd-sysv_235-2ubuntu1 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu1 tar_1.29b-2 tzdata_2017c-1 ubuntu-keyring_2016.10.27 util-linux_2.30.1-0ubuntu4 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: Signature made Thu Nov  2 05:44:18 2017 UTC
gpgv:                using RSA key 
gpgv:                issuer "steve.langasek@ubuntu.com"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libbio-samtools-perl_1.43-1build3.dsc
dpkg-source: info: extracting libbio-samtools-perl in libbio-samtools-perl-1.43
dpkg-source: info: unpacking libbio-samtools-perl_1.43.orig.tar.gz
dpkg-source: info: unpacking libbio-samtools-perl_1.43-1build3.debian.tar.xz

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=C.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-13667868
SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-13667868
SCHROOT_COMMAND=env
SCHROOT_GID=2501
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=build-PACKAGEBUILD-13667868
SCHROOT_UID=2001
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=unknown
USER=buildd
V=1

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package libbio-samtools-perl
dpkg-buildpackage: info: source version 1.43-1build3
dpkg-buildpackage: info: source distribution bionic
 dpkg-source --before-build libbio-samtools-perl-1.43
dpkg-buildpackage: info: host architecture amd64
 fakeroot debian/rules clean
dh clean
   dh_auto_clean
   dh_clean
 debian/rules build
dh build
   dh_update_autotools_config
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
SAMTOOLS=/usr/include/samtools dh_auto_configure
	perl -I. Build.PL --installdirs vendor --config "optimize=-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" --config "ld=x86_64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro"
Found /usr/include/samtools/bam.h and /usr/lib/libbam.a.
Created MYMETA.yml and MYMETA.json
Creating new 'Build' script for 'Bio-SamTools' version '1.43'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_build
	perl Build
Building Bio-SamTools
x86_64-linux-gnu-gcc -I/usr/include/samtools -Ic_bin -I/usr/lib/x86_64-linux-gnu/perl/5.26/CORE -fPIC -D_IOLIB=2 -D_FILE_OFFSET_BITS=64 -Wformat=0 -c -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o c_bin/bam2bedgraph.o c_bin/bam2bedgraph.c
x86_64-linux-gnu-gcc -I/usr/include/samtools -Ic_bin -I/usr/lib/x86_64-linux-gnu/perl/5.26/CORE -DVERSION="1.43" -DXS_VERSION="1.43" -fPIC -D_IOLIB=2 -D_FILE_OFFSET_BITS=64 -Wformat=0 -c -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o lib/Bio/DB/Sam.o lib/Bio/DB/Sam.c
lib/Bio/DB/Sam.xs: In function ‘XS_Bio__DB__Bam_sort_core’:
lib/Bio/DB/Sam.xs:324:4: warning: implicit declaration of function ‘bam_sort_core’; did you mean ‘bam_format1_core’? [-Wimplicit-function-declaration]
    bam_sort_core(is_by_qname,filename,prefix,max_mem);
    ^~~~~~~~~~~~~
    bam_format1_core
lib/Bio/DB/Sam.xs: In function ‘XS_Bio__DB__Bam__Header_view1’:
lib/Bio/DB/Sam.xs:916:8: warning: implicit declaration of function ‘bam_view1’; did you mean ‘bam_dup1’? [-Wimplicit-function-declaration]
        bam_view1(bamh,alignment);
        ^~~~~~~~~
        bam_dup1
ExtUtils::Mkbootstrap::Mkbootstrap('blib/arch/auto/Bio/DB/Sam/Sam.bs')
x86_64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -L/usr/local/lib -fstack-protector-strong -o blib/arch/auto/Bio/DB/Sam/Sam.so lib/Bio/DB/Sam.o c_bin/bam2bedgraph.o -L/usr/lib -lbam -lpthread -lz
make[1]: Entering directory '/<<PKGBUILDDIR>>/c_bin'
gcc -g -Wall -O2 -fPIC -o bam2bedgraph bam2bedgraph.o -Wl,-Bsymbolic-functions -Wl,-z,relro -L/usr/lib -lbam -lpthread -lm -lz
make[1]: Leaving directory '/<<PKGBUILDDIR>>/c_bin'
   dh_auto_test
	perl Build test --verbose 1
make[1]: Entering directory '/<<PKGBUILDDIR>>/c_bin'
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory '/<<PKGBUILDDIR>>/c_bin'
[fai_load] build FASTA index.
[bam_parse_region] fail to determine the sequence name.
t/01sam.t .. 
1..268
# Running under perl version 5.026001 for linux
# Current time local: Fri Nov  3 05:46:48 2017
# Current time GMT:   Fri Nov  3 05:46:48 2017
# Using Test.pm version 1.30
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All tests successful.
Files=1, Tests=268,  1 wallclock secs ( 0.03 usr  0.00 sys +  0.90 cusr  0.05 csys =  0.98 CPU)
Result: PASS
 fakeroot debian/rules binary
dh binary
   dh_testroot
   dh_prep
   dh_auto_install
	perl Build install --destdir /<<PKGBUILDDIR>>/debian/libbio-samtools-perl --create_packlist 0
Building Bio-SamTools
make[1]: Entering directory '/<<PKGBUILDDIR>>/c_bin'
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory '/<<PKGBUILDDIR>>/c_bin'
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/auto/Bio/DB/Sam/Sam.bs
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/auto/Bio/DB/Sam/Sam.so
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/bin/bam2bedgraph
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Sam.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/Query.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/Alignment.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/PileupWrapper.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/Target.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/Pileup.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/FetchIterator.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/ReadIterator.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/AlignWrapper.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Sam/SamToGBrowse.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Sam/Constants.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Sam/Segment.pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Target.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Alignment.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Sam.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Pileup.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Sam::Constants.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::AlignWrapper.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Query.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::PileupWrapper.3pm
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/bin/bamToGBrowse.pl
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/bin/genomeCoverageBed.pl
Installing /<<PKGBUILDDIR>>/debian/libbio-samtools-perl/usr/bin/chrom_sizes.pl
   dh_installdocs
   dh_installchangelogs
   dh_installman
   dh_perl
   dh_link
   dh_strip_nondeterminism
   dh_compress
   dh_fixperms
   dh_missing
   dh_strip
   dh_makeshlibs
   dh_shlibdeps
   dh_installdeb
   dh_gencontrol
   dh_md5sums
   dh_builddeb
INFO: pkgstriptranslations version 131
INFO: pkgstriptranslations version 131
pkgstriptranslations: processing libbio-samtools-perl (in debian/libbio-samtools-perl); do_strip: , oemstrip: 
pkgstriptranslations: processing libbio-samtools-perl-dbgsym (in debian/.debhelper/libbio-samtools-perl/dbgsym-root); do_strip: , oemstrip: 
pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com
pkgstripfiles: processing control file: debian/libbio-samtools-perl/DEBIAN/control, package libbio-samtools-perl, directory debian/libbio-samtools-perl
pkgstripfiles: Truncating usr/share/doc/libbio-samtools-perl/changelog.Debian.gz to topmost ten records
pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbio-samtools-perl ...
pkgstripfiles: No PNG files.
dpkg-deb: building package 'libbio-samtools-perl' in '../libbio-samtools-perl_1.43-1build3_amd64.deb'.
pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com
pkgstripfiles: processing control file: debian/.debhelper/libbio-samtools-perl/dbgsym-root/DEBIAN/control, package libbio-samtools-perl-dbgsym, directory debian/.debhelper/libbio-samtools-perl/dbgsym-root
pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbio-samtools-perl-dbgsym ...
pkgstripfiles: No PNG files.
dpkg-deb: building package 'libbio-samtools-perl-dbgsym' in 'debian/.debhelper/scratch-space/build-libbio-samtools-perl/libbio-samtools-perl-dbgsym_1.43-1build3_amd64.deb'.
	Renaming libbio-samtools-perl-dbgsym_1.43-1build3_amd64.deb to libbio-samtools-perl-dbgsym_1.43-1build3_amd64.ddeb
 dpkg-genbuildinfo --build=binary
 dpkg-genchanges --build=binary -mLaunchpad Build Daemon <buildd@lgw01-amd64-029.buildd> >../libbio-samtools-perl_1.43-1build3_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build libbio-samtools-perl-1.43
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 20171103-0546

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


libbio-samtools-perl_1.43-1build3_amd64.changes:
------------------------------------------------

Format: 1.8
Date: Thu, 02 Nov 2017 05:44:16 +0000
Source: libbio-samtools-perl
Binary: libbio-samtools-perl
Architecture: amd64
Version: 1.43-1build3
Distribution: bionic-proposed
Urgency: medium
Maintainer: Launchpad Build Daemon <buildd@lgw01-amd64-029.buildd>
Changed-By: Steve Langasek <steve.langasek@ubuntu.com>
Description:
 libbio-samtools-perl - Perl interface to SamTools library for DNA sequencing
Changes:
 libbio-samtools-perl (1.43-1build3) bionic; urgency=medium
 .
   * No-change rebuild against perlapi-5.26.1
Checksums-Sha1:
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 0f9e251026079546d56de1a03bf7f31d6a6feaf1 5343 libbio-samtools-perl_1.43-1build3_amd64.buildinfo
 f861ea8db52d1be0bf85a1410ab9068b0aae2ad3 190384 libbio-samtools-perl_1.43-1build3_amd64.deb
Checksums-Sha256:
 44a45c96f54292a7c25cf624883d8de7c5a074b81f9b274f4fe3428accb6c24f 90376 libbio-samtools-perl-dbgsym_1.43-1build3_amd64.ddeb
 655ce826b3d476a9c82d75f4c025e0289162166855450af6f507d7412453d24a 5343 libbio-samtools-perl_1.43-1build3_amd64.buildinfo
 a0903993c72b7e20e81b3bb52bda948709a8289fb8e940dcf713c826bc9de72e 190384 libbio-samtools-perl_1.43-1build3_amd64.deb
Files:
 700012f8be435b36b8ff1ba44a2decbc 90376 debug optional libbio-samtools-perl-dbgsym_1.43-1build3_amd64.ddeb
 eb73a98fd955ca87c6d0cff2e800298e 5343 perl optional libbio-samtools-perl_1.43-1build3_amd64.buildinfo
 c639ce6abefc103b2f274a0cfe61f814 190384 perl optional libbio-samtools-perl_1.43-1build3_amd64.deb
Original-Maintainer: Debian Perl Group <pkg-perl-maintainers@lists.alioth.debian.org>

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


libbio-samtools-perl_1.43-1build3_amd64.deb
-------------------------------------------

 new debian package, version 2.0.
 size 190384 bytes: control archive=1736 bytes.
    1077 bytes,    20 lines      control              
    2368 bytes,    28 lines      md5sums              
 Package: libbio-samtools-perl
 Version: 1.43-1build3
 Architecture: amd64
 Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
 Installed-Size: 615
 Depends: perl (>= 5.26.1-2ubuntu1), perlapi-5.26.1, libc6 (>= 2.15), zlib1g (>= 1:1.2.3.3), libbio-perl-perl
 Enhances: gbrowse, samtools
 Section: perl
 Priority: optional
 Homepage: https://metacpan.org/release/Bio-SamTools
 Description: Perl interface to SamTools library for DNA sequencing
  Bio::SamTools provides a Perl interface to the libbam library for indexed and
  unindexed SAM/BAM sequence alignment databases. It provides support for
  retrieving information on individual alignments, read pairs, and alignment
  coverage information across large regions. It also provides callback
  functionality for calling SNPs and performing other base-by-base functions.
  Most operations are compatible with the BioPerl Bio::SeqFeatureI interface,
  allowing BAM files to be used as a backend to the GBrowse genome browser
  application.
 Original-Maintainer: Debian Perl Group <pkg-perl-maintainers@lists.alioth.debian.org>

drwxr-xr-x root/root         0 2017-11-02 05:44 ./
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/bin/
-rwxr-xr-x root/root    142728 2017-11-02 05:44 ./usr/bin/bam2bedgraph
-rwxr-xr-x root/root      2087 2017-11-02 05:44 ./usr/bin/bamToGBrowse.pl
-rwxr-xr-x root/root       331 2017-11-02 05:44 ./usr/bin/chrom_sizes.pl
-rwxr-xr-x root/root       283 2017-11-02 05:44 ./usr/bin/genomeCoverageBed.pl
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/
-rw-r--r-- root/root     11925 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/AlignWrapper.pm
-rw-r--r-- root/root     17627 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/Alignment.pm
-rw-r--r-- root/root       335 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/FetchIterator.pm
-rw-r--r-- root/root      2404 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/Pileup.pm
-rw-r--r-- root/root      1891 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/PileupWrapper.pm
-rw-r--r-- root/root      4636 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/Query.pm
-rw-r--r-- root/root       402 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/ReadIterator.pm
-rw-r--r-- root/root      1046 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Bam/Target.pm
-rw-r--r-- root/root     77823 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Sam.pm
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Sam/
-rw-r--r-- root/root      2296 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Sam/Constants.pm
-rw-r--r-- root/root     12026 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Sam/SamToGBrowse.pm
-rw-r--r-- root/root      2284 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/Bio/DB/Sam/Segment.pm
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/auto/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/auto/Bio/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/auto/Bio/DB/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/auto/Bio/DB/Sam/
-rw-r--r-- root/root         0 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/auto/Bio/DB/Sam/Sam.bs
-rw-r--r-- root/root    254328 2017-11-02 05:44 ./usr/lib/x86_64-linux-gnu/perl5/5.26/auto/Bio/DB/Sam/Sam.so
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/share/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/share/doc/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/share/doc/libbio-samtools-perl/
-rw-r--r-- root/root      1300 2017-11-02 05:44 ./usr/share/doc/libbio-samtools-perl/changelog.Debian.gz
-rw-r--r-- root/root     11608 2016-02-13 09:24 ./usr/share/doc/libbio-samtools-perl/copyright
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/share/man/
drwxr-xr-x root/root         0 2017-11-02 05:44 ./usr/share/man/man3/
-rw-r--r-- root/root      2539 2017-11-02 05:44 ./usr/share/man/man3/Bio::DB::Bam::AlignWrapper.3pm.gz
-rw-r--r-- root/root      7584 2017-11-02 05:44 ./usr/share/man/man3/Bio::DB::Bam::Alignment.3pm.gz
-rw-r--r-- root/root      2923 2017-11-02 05:44 ./usr/share/man/man3/Bio::DB::Bam::Pileup.3pm.gz
-rw-r--r-- root/root      2266 2017-11-02 05:44 ./usr/share/man/man3/Bio::DB::Bam::PileupWrapper.3pm.gz
-rw-r--r-- root/root      2932 2017-11-02 05:44 ./usr/share/man/man3/Bio::DB::Bam::Query.3pm.gz
-rw-r--r-- root/root      1938 2017-11-02 05:44 ./usr/share/man/man3/Bio::DB::Bam::Target.3pm.gz
-rw-r--r-- root/root     20866 2017-11-02 05:44 ./usr/share/man/man3/Bio::DB::Sam.3pm.gz
-rw-r--r-- root/root      2422 2017-11-02 05:44 ./usr/share/man/man3/Bio::DB::Sam::Constants.3pm.gz


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not removing build depends: as requested

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: amd64
Build-Space: 3852
Build-Time: 14
Distribution: bionic-proposed
Host Architecture: amd64
Install-Time: 13
Job: libbio-samtools-perl_1.43-1build3.dsc
Machine Architecture: amd64
Package: libbio-samtools-perl
Package-Time: 27
Source-Version: 1.43-1build3
Space: 3852
Status: successful
Version: 1.43-1build3
--------------------------------------------------------------------------------
Finished at 20171103-0546
Build needed 00:00:27, 3852k disc space
RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-13667868
Scanning for processes to kill in build PACKAGEBUILD-13667868
RUN: /usr/share/launchpad-buildd/slavebin/in-target umount-chroot --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-13667868
Stopping target for build PACKAGEBUILD-13667868
RUN: /usr/share/launchpad-buildd/slavebin/in-target remove-build --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-13667868
Removing build PACKAGEBUILD-13667868