Ubuntu
last-align package

last-align 1257-1 source package in Ubuntu

Changelog

last-align (1257-1) unstable; urgency=medium

  [ Vagrant Cascadian ]
  * Do not embed cpu-specific features in manpages
    Closes: #1003379

  [ Andreas Tille ]
  * Re-enable reprotest in Salca-CI to see whether the means above are
    working properly
  * New upstream version
  * Standards-Version: 4.6.0 (routine-update)

 -- Andreas Tille <email address hidden>  Mon, 10 Jan 2022 09:53:09 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
science
Urgency:
Medium Urgency

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Downloads

File Size SHA-256 Checksum
last-align_1257-1.dsc 2.1 KiB 5a7ddd41d70d01881bcae848830885aa1b9c4e46533004aace86292d51a40e96
last-align_1257.orig.tar.xz 1.2 MiB d26fc716f737f8783c96dd7e9cf57e69c8f50c1185b4fd9db6dbf00ab4c5c347
last-align_1257-1.debian.tar.xz 16.3 KiB adf65d9cf6d7eda5da10a974f7ea51dcfc34f51d22cb9b0373699c2cb1d2eabb

Available diffs

No changes file available.

Binary packages built by this source

last-align: genome-scale comparison of biological sequences

 LAST is software for comparing and aligning sequences, typically DNA or
 protein sequences. LAST is similar to BLAST, but it copes better with very
 large amounts of sequence data. Here are two things LAST is good at:
 .
  * Comparing large (e.g. mammalian) genomes.
  * Mapping lots of sequence tags onto a genome.
 .
 The main technical innovation is that LAST finds initial matches based on
 their multiplicity, instead of using a fixed size (e.g. BLAST uses 10-mers).
 This allows one to map tags to genomes without repeat-masking, without becoming
 overwhelmed by repetitive hits. To find these variable-sized matches, it uses
 a suffix array (inspired by Vmatch). To achieve high sensitivity, it uses a
 discontiguous suffix array, analogous to spaced seeds.

last-align-dbgsym: debug symbols for last-align