kmer 0~20150903+r2013-8build1 source package in Ubuntu
Changelog
kmer (0~20150903+r2013-8build1) hirsute; urgency=medium * No-change rebuild to build with python3.9 as default. -- Matthias Klose <email address hidden> Thu, 19 Nov 2020 18:32:50 +0100
Upload details
- Uploaded by:
- Matthias Klose
- Uploaded to:
- Hirsute
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| kmer_0~20150903+r2013.orig.tar.gz | 1.2 MiB | 8fd9c289244e69e38bb7709f3523d39edf1c2ced2cbcc687fcf00ecfca78ea47 |
| kmer_0~20150903+r2013-8build1.debian.tar.xz | 2.3 MiB | 71b2f5ff6048f7bc15e69f88555c64c870b1559def2211a9980b3571b9aa3f71 |
| kmer_0~20150903+r2013-8build1.dsc | 2.4 KiB | 3c5c5f5b18a179cd2f8759b4c102421184e3a5f559b65360f9b6246b5dfd8ce8 |
Available diffs
Binary packages built by this source
- atac: genome assembly-to-assembly comparison
atac computes a one-to-one pairwise alignment of large DNA sequences. It first
finds the unique k-mers in each sequence, chains them to larger blocks, and
fills in spaces between blocks. It was written primarily to transfer
annotations between different assemblies of the human genome.
.
The output is a set of ungapped 'matches', and a set of gapped 'runs' formed
from the matches. Each match or run associates one sequence with the other
sequence. The association is 'unique', in that there is no other (sizeable)
associations for either sequence. Thus, large repeats and duplications are not
present in the output - they appear as unmapped regions.
.
Though the output is always pairwise, atac can cache intermediate results to
speed a comparisons of multiple sequences.
.
This package is part of the Kmer suite.
- atac-dbgsym: No summary available for atac-dbgsym in ubuntu hirsute.
No description available for atac-dbgsym in ubuntu hirsute.
- kmer: No summary available for kmer in ubuntu hirsute.
No description available for kmer in ubuntu hirsute.
- kmer-examples: No summary available for kmer-examples in ubuntu hirsute.
No description available for kmer-examples in ubuntu hirsute.
- leaff: No summary available for leaff in ubuntu hirsute.
No description available for leaff in ubuntu hirsute.
- leaff-dbgsym: debug symbols for leaff
- libkmer-dev: No summary available for libkmer-dev in ubuntu hirsute.
No description available for libkmer-dev in ubuntu hirsute.
- libmeryl-dev: No summary available for libmeryl-dev in ubuntu hirsute.
No description available for libmeryl-dev in ubuntu hirsute.
- meryl: No summary available for meryl in ubuntu impish.
No description available for meryl in ubuntu impish.
- meryl-dbgsym: No summary available for meryl-dbgsym in ubuntu hirsute.
No description available for meryl-dbgsym in ubuntu hirsute.
- sim4db: No summary available for sim4db in ubuntu hirsute.
No description available for sim4db in ubuntu hirsute.
- sim4db-dbgsym: debug symbols for sim4db
