Ubuntu
kissplice package

kissplice 1.8.3-1 source package in Ubuntu

Changelog

kissplice (1.8.3-1) unstable; urgency=low


  * Initial debian release (Closes: #711946)
  
 -- David Parsons <email address hidden>  Wed, 05 Jun 2013 12:00:35 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Low Urgency

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Downloads

File Size SHA-256 Checksum
kissplice_1.8.3-1.dsc 1.3 KiB 4e4a66e1eb5d14482d57f1e0133c2d3119ab84c544a2ca017dbdea9e4cc39751
kissplice_1.8.3.orig.tar.gz 333.7 KiB 0dae5bf4d624de16f81e587e6f8b77285d3be3502c7254a09f127bad94e300c2
kissplice_1.8.3-1.debian.tar.gz 4.2 KiB a79e401be1fa54b152d1707a20b8dd6cb11f9efeb00370fa07c9c01e93175f6e

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Binary packages built by this source

kissplice: Detection of various kinds of polymorphisms in RNA-seq data

 KisSplice is a piece of software that enables the analysis of RNA-seq data
 with or without a reference genome. It is an exact local transcriptome
 assembler that allows one to identify SNPs, indels and alternative splicing
 events. It can deal with an arbitrary number of biological conditions, and
 will quantify each variant in each condition.
 It has been tested on Illumina datasets of up to 1G reads.
 Its memory consumption is around 5Gb for 100M reads.