Ubuntu
kallisto package

kallisto 0.46.1+dfsg-2build1 source package in Ubuntu

Changelog

kallisto (0.46.1+dfsg-2build1) focal; urgency=medium

  * No-change rebuild for libgcc-s1 package name change.

 -- Matthias Klose <email address hidden>  Mon, 23 Mar 2020 07:16:54 +0100

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Uploaded by:
Matthias Klose
Uploaded to:
Focal
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal release universe misc

Downloads

File Size SHA-256 Checksum
kallisto_0.46.1+dfsg.orig.tar.xz 827.6 KiB 4d8b0bd6bac52eb714df53e81f4a5248c65ba46b70f0edf61a1dfe3dfde62f52
kallisto_0.46.1+dfsg-2build1.debian.tar.xz 5.7 KiB 97ab53dd4ab40599ff85319485e07b9836dad2ad2141ed02fad5880959df6bc9
kallisto_0.46.1+dfsg-2build1.dsc 2.1 KiB 1b1f5e093fd4cc9685041d2a22aeef7d9599b1c90ee8098d76d272641bf928c6

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Binary packages built by this source

kallisto: near-optimal RNA-Seq quantification

 Kallisto is a program for quantifying abundances of transcripts from
 RNA-Seq data, or more generally of target sequences using high-throughput
 sequencing reads. It is based on the novel idea of pseudoalignment for
 rapidly determining the compatibility of reads with targets, without the
 need for alignment. On benchmarks with standard RNA-Seq data, kallisto
 can quantify 30 million human reads in less than 3 minutes on a Mac
 desktop computer using only the read sequences and a transcriptome index
 that itself takes less than 10 minutes to build. Pseudoalignment of
 reads preserves the key information needed for quantification, and
 kallisto is therefore not only fast, but also as accurate than existing
 quantification tools. In fact, because the pseudoalignment procedure is
 robust to errors in the reads, in many benchmarks kallisto significantly
 outperforms existing tools.

kallisto-dbgsym: debug symbols for kallisto
kallisto-examples: No summary available for kallisto-examples in ubuntu groovy.

No description available for kallisto-examples in ubuntu groovy.