jellyfish1 1.1.11-6 source package in Ubuntu
Changelog
jellyfish1 (1.1.11-6) unstable; urgency=medium * Team Upload. * Get package building with autoconf 2.70 (Closes: #978842) * Bump Standards-Version to 4.6.0 (no changes needed) -- Nilesh Patra <email address hidden> Sun, 29 Aug 2021 03:40:58 +0530
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Jammy | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| jellyfish1_1.1.11-6.dsc | 2.0 KiB | 4b921deb09f2fd7b6635718e972060b8b8e5d6282e70b0db7045e4fbe57b8072 |
| jellyfish1_1.1.11.orig.tar.gz | 1.0 MiB | 496645d96b08ba35db1f856d857a159798c73cbc1eccb852ef1b253d1678c8e2 |
| jellyfish1_1.1.11-6.debian.tar.xz | 5.4 KiB | dbd798dbe86cfcc01c2ad0e283d0bf28c4af1c51700549e6e7b27a6cf81896bf |
Available diffs
- diff from 1.1.11-5 to 1.1.11-6 (1.1 KiB)
No changes file available.
Binary packages built by this source
- jellyfish1: count k-mers in DNA sequences
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
.
This is the latest version of the 1.x series of jellyfish which is
used by some other applications that are not compatible with version
2.x which is provided inside the jellyfish package.
- jellyfish1-dbgsym: debug symbols for jellyfish1
