Ubuntu
idba package

idba 1.1.3-5build1 source package in Ubuntu

Changelog

idba (1.1.3-5build1) focal; urgency=medium

  * No-change rebuild for libgcc-s1 package name change.

 -- Matthias Klose <email address hidden>  Sun, 22 Mar 2020 16:44:10 +0100

Upload details

Uploaded by:
Matthias Klose
Uploaded to:
Focal
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal release universe misc

Downloads

File Size SHA-256 Checksum
idba_1.1.3.orig.tar.gz 435.8 KiB 030e24463c6d725c1c202baabf773b605b51e310844fd0f27f4688ecfbae26d0
idba_1.1.3-5build1.debian.tar.xz 7.2 KiB 2b9a9059b34638748fda7739435e03105202706594df5196129f0b5427809f0c
idba_1.1.3-5build1.dsc 1.9 KiB f3a010fb524e545c66bb74831ae41177c9872daa925383be0e32a8e22e93378e

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Binary packages built by this source

idba: iterative De Bruijn Graph short read assemblers

 IDBA stands for iterative de Bruijn graph assembler. In computational
 sequence biology, an assembler solves the puzzle coming from large
 sequencing machines that feature many gigabytes of short reads from a
 large genome.
 .
 This package provides several flavours of the IDBA assembler, as they all
 share the same source tree but serve different purposes and evolved over time.
 .
 IDBA is the basic iterative de Bruijn graph assembler for
 second-generation sequencing reads. IDBA-UD, an extension of IDBA,
 is designed to utilize paired-end reads to assemble low-depth regions
 and use progressive depth on contigs to reduce errors in high-depth
 regions. It is a generic purpose assembler and especially good for
 single-cell and metagenomic sequencing data. IDBA-Hybrid is another
 update version of IDBA-UD, which can make use of a similar reference
 genome to improve assembly result. IDBA-Tran is an iterative de Bruijn
 graph assembler for RNA-Seq data.

idba-dbgsym: debug symbols for idba