Ubuntu
idba package

idba 1.1.2-1 source package in Ubuntu

Changelog

idba (1.1.2-1) unstable; urgency=medium


  * New upstream version at github (adapted patches)
  * Adapt d/watch to fetch release tarball

 -- Andreas Tille <email address hidden>  Sat, 21 Jun 2014 00:10:01 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Xenial release universe misc

Downloads

File Size SHA-256 Checksum
idba_1.1.2-1.dsc 1.9 KiB 50e4333d262169b16bc60c410a50833e33e704ed89ed9635165ef73fdd2ea1b9
idba_1.1.2.orig.tar.gz 417.8 KiB b68e3b8e1c7c030f23a66892bf098d3dbfc359fba413ec33b4673398898f4088
idba_1.1.2-1.debian.tar.xz 3.4 KiB cebd5f1c4e26603b15ce35f63b789799e6deae8abab4350a3dfd9c206a306237

Available diffs

No changes file available.

Binary packages built by this source

idba: iterative De Bruijn Graph De Novo short read assembler for transcriptome

 IDBA-Tran is an iterative De Bruijn Graph De Novo short read assembler
 for transcriptome. It is purely de novo assembler based on only RNA
 sequencing reads. IDBA-Tran uses local assembly to reconstructing
 missing k-mers in low-expressed transcripts and then employs progressive
 cutoff on contigs to separate the graph into components. Each component
 corresponds to one gene in most cases and contains not many transcripts.
 A heuristic algorithm based on pair-end reads is then used to find the
 isoforms.

idba-dbgsym: No summary available for idba-dbgsym in ubuntu yakkety.

No description available for idba-dbgsym in ubuntu yakkety.