Ubuntu
hhsuite package

hhsuite 3.3.0+ds-8 source package in Ubuntu

Changelog

hhsuite (3.3.0+ds-8) unstable; urgency=medium

  * Team upload.
  * gcc-13.patch: new: fix ftbfs with gcc 13. (Closes: #1037689)
  * d/control: declare compliance to standards version 4.6.2.

 -- Étienne Mollier <email address hidden>  Sun, 13 Aug 2023 10:47:11 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe science
Noble release universe science
Mantic release universe science

Downloads

File Size SHA-256 Checksum
hhsuite_3.3.0+ds-8.dsc 2.2 KiB 61afd54c119d7bf8d60ffee1a9b5151f8c1bb20943a2f72671c8aa0ae4680171
hhsuite_3.3.0+ds.orig.tar.xz 4.6 MiB a81037f2e2a4801f1a42f5aa5939334fe038053d05ceabdc0899fefb8cc00a44
hhsuite_3.3.0+ds-8.debian.tar.xz 16.5 KiB d408a3d42581737068f06b96cd922c462f672beeb4faf94f41ac37340170b3cb

Available diffs

No changes file available.

Binary packages built by this source

hhsuite: sensitive protein sequence searching based on HMM-HMM alignment

 HH-suite is an open-source software package for sensitive protein sequence
 searching based on the pairwise alignment of hidden Markov models (HMMs).
 .
 This package contains HHsearch and HHblits among other programs and utilities.
 .
 HHsearch takes as input a multiple sequence alignment (MSA) or profile HMM
 and searches a database of HMMs (e.g. PDB, Pfam, or InterPro) for homologous
 proteins. HHsearch is often used for protein structure prediction to detect
 homologous templates and to build highly accurate query-template pairwise
 alignments for homology modeling.
 .
 HHblits can build high-quality MSAs starting from single sequences or from
 MSAs. It transforms these into a query HMM and, using an iterative search
 strategy, adds significantly similar sequences from the previous search to
 the updated query HMM for the next search iteration. Compared to PSI-BLAST,
 HHblits is faster, up to twice as sensitive and produces more accurate
 alignments.

hhsuite-data: sensitive protein sequence searching based on HMM-HMM alignment (data)

 HH-suite is an open-source software package for sensitive protein sequence
 searching based on the pairwise alignment of hidden Markov models (HMMs).
 .
 This package contains architecture independent scripts and data files.

hhsuite-dbgsym: debug symbols for hhsuite