RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux bos02-arm64-026 4.4.0-109-generic #132-Ubuntu SMP Tue Jan 9 20:00:40 UTC 2018 aarch64 Buildd toolchain package versions: launchpad-buildd_157 python-lpbuildd_157 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.3 dpkg-dev_1.18.4ubuntu1.3 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 20 Jan 22:27:42 ntpdate[1837]: adjust time server 10.211.37.1 offset 0.018842 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=bionic --arch=arm64 PACKAGEBUILD-14229464 /home/buildd/filecache-default/78cf3583c71e53d2c7312b9d7596a64d82c6adad Creating target for build PACKAGEBUILD-14229464 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=bionic --arch=arm64 PACKAGEBUILD-14229464 Starting target for build PACKAGEBUILD-14229464 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=bionic --arch=arm64 PACKAGEBUILD-14229464 'deb http://ftpmaster.internal/ubuntu bionic main universe' 'deb http://ftpmaster.internal/ubuntu bionic-security main universe' 'deb http://ftpmaster.internal/ubuntu bionic-updates main universe' 'deb http://ftpmaster.internal/ubuntu bionic-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-14229464 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=bionic --arch=arm64 PACKAGEBUILD-14229464 Updating target for build PACKAGEBUILD-14229464 Get:1 http://ftpmaster.internal/ubuntu bionic InRelease [235 kB] Get:2 http://ftpmaster.internal/ubuntu bionic-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu bionic-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu bionic-proposed InRelease [235 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/main arm64 Packages [972 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main Translation-en [517 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/universe arm64 Packages [8176 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/universe Translation-en [4941 kB] Get:9 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 Packages [144 kB] Get:10 http://ftpmaster.internal/ubuntu bionic-proposed/main Translation-en [84.5 kB] Get:11 http://ftpmaster.internal/ubuntu bionic-proposed/universe arm64 Packages [486 kB] Get:12 http://ftpmaster.internal/ubuntu bionic-proposed/universe Translation-en [366 kB] Fetched 16.3 MB in 8s (2024 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: gnupg-agent libcurl3-gnutls libgssapi-krb5-2 libidn2-0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libnghttp2-14 libpsl5 librtmp1 libunistring0 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: dirmngr gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpg-wks-server gpgconf gpgsm liblsan0 libnghttp2-14 libtsan0 The following packages will be upgraded: adduser apt apt-transport-https base-files base-passwd binutils binutils-aarch64-linux-gnu binutils-common bsdutils build-essential coreutils cpp-7 dash debconf debianutils dpkg dpkg-dev e2fslibs e2fsprogs fakeroot fdisk findutils g++-7 gcc-7 gcc-7-base gnupg gnupg-agent gpgv init init-system-helpers libapparmor1 libapt-pkg5.0 libasan4 libasn1-8-heimdal libassuan0 libatomic1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcomerr2 libcryptsetup4 libcurl3-gnutls libdpkg-perl libfakeroot libfdisk1 libffi6 libgcc-7-dev libgcc1 libgcrypt20 libgmp10 libgomp1 libgpg-error0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libidn11 libidn2-0 libip4tc0 libitm1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblockfile-bin liblockfile1 libmount1 libncurses5 libncursesw5 libnettle6 libnpth0 libp11-kit0 libpcre3 libperl5.26 libpng16-16 libprocps6 libpsl5 libroken18-heimdal libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libssl1.0.0 libstdc++-7-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo5 libubsan0 libudev1 libuuid1 libwind0-heimdal linux-libc-dev lsb-base mount multiarch-support ncurses-base ncurses-bin openssl optipng perl perl-base perl-modules-5.26 pinentry-curses procps sensible-utils systemd systemd-sysv sysvinit-utils tzdata util-linux 124 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. Need to get 55.5 MB of archives. After this operation, 8450 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 perl-modules-5.26 all 5.26.1-4 [2761 kB] Get:2 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libperl5.26 arm64 5.26.1-4 [3311 kB] Get:3 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 perl arm64 5.26.1-4 [201 kB] Get:4 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 perl-base arm64 5.26.1-4 [1235 kB] Get:5 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libc6-dev arm64 2.26-0ubuntu3 [2011 kB] Get:6 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libc-dev-bin arm64 2.26-0ubuntu3 [59.1 kB] Get:7 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 linux-libc-dev arm64 4.13.0-30.33 [932 kB] Get:8 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libitm1 arm64 7.2.0-19ubuntu1 [25.5 kB] Get:9 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gcc-7-base arm64 7.2.0-19ubuntu1 [19.3 kB] Get:10 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libgcc1 arm64 1:7.2.0-19ubuntu1 [33.5 kB] Get:11 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libgomp1 arm64 7.2.0-19ubuntu1 [62.0 kB] Get:12 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libatomic1 arm64 7.2.0-19ubuntu1 [6632 B] Get:13 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libasan4 arm64 7.2.0-19ubuntu1 [335 kB] Get:14 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 liblsan0 arm64 7.2.0-19ubuntu1 [123 kB] Get:15 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libtsan0 arm64 7.2.0-19ubuntu1 [265 kB] Get:16 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libubsan0 arm64 7.2.0-19ubuntu1 [117 kB] Get:17 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 cpp-7 arm64 7.2.0-19ubuntu1 [5317 kB] Get:18 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libcc1-0 arm64 7.2.0-19ubuntu1 [35.4 kB] Get:19 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 g++-7 arm64 7.2.0-19ubuntu1 [6127 kB] Get:20 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gcc-7 arm64 7.2.0-19ubuntu1 [5969 kB] Get:21 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libgcc-7-dev arm64 7.2.0-19ubuntu1 [835 kB] Get:22 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libstdc++-7-dev arm64 7.2.0-19ubuntu1 [1457 kB] Get:23 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libstdc++6 arm64 7.2.0-19ubuntu1 [377 kB] Get:24 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libgmp10 arm64 2:6.1.2+dfsg-1.2 [204 kB] Get:25 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libbinutils arm64 2.29.1-13ubuntu1 [427 kB] Get:26 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 binutils arm64 2.29.1-13ubuntu1 [3384 B] Get:27 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 binutils-common arm64 2.29.1-13ubuntu1 [190 kB] Get:28 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 binutils-aarch64-linux-gnu arm64 2.29.1-13ubuntu1 [2155 kB] Get:29 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libc6 arm64 2.26-0ubuntu3 [2235 kB] Get:30 http://ftpmaster.internal/ubuntu bionic/main arm64 init-system-helpers all 1.51 [37.3 kB] Get:31 http://ftpmaster.internal/ubuntu bionic/main arm64 base-files arm64 10ubuntu1 [55.9 kB] Get:32 http://ftpmaster.internal/ubuntu bionic/main arm64 bsdutils arm64 1:2.30.2-0.1ubuntu1 [54.6 kB] Get:33 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 coreutils arm64 8.28-1ubuntu1 [1076 kB] Get:34 http://ftpmaster.internal/ubuntu bionic/main arm64 debianutils arm64 4.8.4 [84.7 kB] Get:35 http://ftpmaster.internal/ubuntu bionic/main arm64 dpkg arm64 1.19.0.4ubuntu1 [1100 kB] Get:36 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 dash arm64 0.5.8-2.5ubuntu1 [102 kB] Get:37 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 e2fslibs arm64 1.43.8-2 [138 kB] Get:38 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 e2fsprogs arm64 1.43.8-2 [455 kB] Get:39 http://ftpmaster.internal/ubuntu bionic/main arm64 findutils arm64 4.6.0+git+20170828-2 [278 kB] Get:40 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libncurses5 arm64 6.0+20171125-1ubuntu1 [77.0 kB] Get:41 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libtinfo5 arm64 6.0+20171125-1ubuntu1 [71.4 kB] Get:42 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libncursesw5 arm64 6.0+20171125-1ubuntu1 [96.4 kB] Get:43 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 ncurses-bin arm64 6.0+20171125-1ubuntu1 [153 kB] Get:44 http://ftpmaster.internal/ubuntu bionic/main arm64 libuuid1 arm64 2.30.2-0.1ubuntu1 [14.1 kB] Get:45 http://ftpmaster.internal/ubuntu bionic/main arm64 libblkid1 arm64 2.30.2-0.1ubuntu1 [100 kB] Get:46 http://ftpmaster.internal/ubuntu bionic/main arm64 libsmartcols1 arm64 2.30.2-0.1ubuntu1 [67.0 kB] Get:47 http://ftpmaster.internal/ubuntu bionic/main arm64 libfdisk1 arm64 2.30.2-0.1ubuntu1 [132 kB] Get:48 http://ftpmaster.internal/ubuntu bionic/main arm64 libpcre3 arm64 2:8.39-8 [203 kB] Get:49 http://ftpmaster.internal/ubuntu bionic/main arm64 libselinux1 arm64 2.7-2 [57.4 kB] Get:50 http://ftpmaster.internal/ubuntu bionic/main arm64 libmount1 arm64 2.30.2-0.1ubuntu1 [111 kB] Get:51 http://ftpmaster.internal/ubuntu bionic/main arm64 fdisk arm64 2.30.2-0.1ubuntu1 [93.9 kB] Get:52 http://ftpmaster.internal/ubuntu bionic/main arm64 util-linux arm64 2.30.2-0.1ubuntu1 [796 kB] Get:53 http://ftpmaster.internal/ubuntu bionic/main arm64 base-passwd arm64 3.5.44 [45.6 kB] Get:54 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libc-bin arm64 2.26-0ubuntu3 [469 kB] Get:55 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 ncurses-base all 6.0+20171125-1ubuntu1 [17.3 kB] Get:56 http://ftpmaster.internal/ubuntu bionic/main arm64 sysvinit-utils arm64 2.88dsf-59.10ubuntu1 [17.7 kB] Get:57 http://ftpmaster.internal/ubuntu bionic/main arm64 libudev1 arm64 235-3ubuntu3 [46.3 kB] Get:58 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libapt-pkg5.0 arm64 1.6~alpha7 [756 kB] Get:59 http://ftpmaster.internal/ubuntu bionic/main arm64 debconf all 1.5.65 [124 kB] Get:60 http://ftpmaster.internal/ubuntu bionic/main arm64 adduser all 3.116ubuntu1 [163 kB] Get:61 http://ftpmaster.internal/ubuntu bionic/main arm64 libgpg-error0 arm64 1.27-5 [32.8 kB] Get:62 http://ftpmaster.internal/ubuntu bionic/main arm64 libgcrypt20 arm64 1.8.1-4 [325 kB] Get:63 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gpgv arm64 2.2.4-1ubuntu1 [165 kB] Get:64 http://ftpmaster.internal/ubuntu bionic/main arm64 libseccomp2 arm64 2.3.1-2.1ubuntu3 [33.9 kB] Get:65 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 apt arm64 1.6~alpha7 [1119 kB] Get:66 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libapparmor1 arm64 2.11.0-2ubuntu19 [26.0 kB] Get:67 http://ftpmaster.internal/ubuntu bionic/main arm64 libcap2 arm64 1:2.25-1.2 [12.2 kB] Get:68 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libcryptsetup4 arm64 2:1.7.5-1ubuntu1 [65.1 kB] Get:69 http://ftpmaster.internal/ubuntu bionic/main arm64 libidn11 arm64 1.33-2.1 [43.0 kB] Get:70 http://ftpmaster.internal/ubuntu bionic/main arm64 libip4tc0 arm64 1.6.1-2ubuntu2 [18.3 kB] Get:71 http://ftpmaster.internal/ubuntu bionic/main arm64 mount arm64 2.30.2-0.1ubuntu1 [102 kB] Get:72 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libprocps6 arm64 2:3.3.12-3ubuntu1 [28.2 kB] Get:73 http://ftpmaster.internal/ubuntu bionic/main arm64 lsb-base all 9.20170808ubuntu1 [12.5 kB] Get:74 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 procps arm64 2:3.3.12-3ubuntu1 [207 kB] Get:75 http://ftpmaster.internal/ubuntu bionic/main arm64 systemd arm64 235-3ubuntu3 [2487 kB] Get:76 http://ftpmaster.internal/ubuntu bionic/main arm64 libsystemd0 arm64 235-3ubuntu3 [165 kB] Get:77 http://ftpmaster.internal/ubuntu bionic/main arm64 init arm64 1.51 [5864 B] Get:78 http://ftpmaster.internal/ubuntu bionic/main arm64 systemd-sysv arm64 235-3ubuntu3 [13.1 kB] Get:79 http://ftpmaster.internal/ubuntu bionic/main arm64 libcap-ng0 arm64 0.7.7-3.1 [10.0 kB] Get:80 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libcomerr2 arm64 1.43.8-2 [10.7 kB] Get:81 http://ftpmaster.internal/ubuntu bionic/main arm64 libsemanage-common all 2.7-2 [6916 B] Get:82 http://ftpmaster.internal/ubuntu bionic/main arm64 libsemanage1 arm64 2.7-2 [70.1 kB] Get:83 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libss2 arm64 1.43.8-2 [9888 B] Get:84 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libffi6 arm64 3.2.1-8 [17.0 kB] Get:85 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libnettle6 arm64 3.4-1 [114 kB] Get:86 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libhogweed4 arm64 3.4-1 [130 kB] Get:87 http://ftpmaster.internal/ubuntu bionic/main arm64 libp11-kit0 arm64 0.23.9-2 [138 kB] Get:88 http://ftpmaster.internal/ubuntu bionic/main arm64 libtasn1-6 arm64 4.12-3 [32.1 kB] Get:89 http://ftpmaster.internal/ubuntu bionic/main arm64 sensible-utils all 0.0.11 [14.8 kB] Get:90 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gnupg-l10n all 2.2.4-1ubuntu1 [48.6 kB] Get:91 http://ftpmaster.internal/ubuntu bionic/main arm64 libassuan0 arm64 2.5.1-1 [28.8 kB] Get:92 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gnupg arm64 2.2.4-1ubuntu1 [249 kB] Get:93 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gnupg-agent all 2.2.4-1ubuntu1 [4544 B] Get:94 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gpgconf arm64 2.2.4-1ubuntu1 [106 kB] Get:95 http://ftpmaster.internal/ubuntu bionic/main arm64 pinentry-curses arm64 1.0.0-3 [31.3 kB] Get:96 http://ftpmaster.internal/ubuntu bionic/main arm64 libnpth0 arm64 1.5-3 [6844 B] Get:97 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gpg-agent arm64 2.2.4-1ubuntu1 [190 kB] Get:98 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gnupg-utils arm64 2.2.4-1ubuntu1 [107 kB] Get:99 http://ftpmaster.internal/ubuntu bionic/main arm64 libsqlite3-0 arm64 3.21.0-1 [422 kB] Get:100 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gpg arm64 2.2.4-1ubuntu1 [401 kB] Get:101 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gpg-wks-client arm64 2.2.4-1ubuntu1 [76.6 kB] Get:102 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gpg-wks-server arm64 2.2.4-1ubuntu1 [71.4 kB] Get:103 http://ftpmaster.internal/ubuntu bionic-proposed/universe arm64 gpgsm arm64 2.2.4-1ubuntu1 [182 kB] Get:104 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 dirmngr arm64 2.2.4-1ubuntu1 [275 kB] Get:105 http://ftpmaster.internal/ubuntu bionic/main arm64 libroken18-heimdal arm64 7.5.0+dfsg-1 [35.4 kB] Get:106 http://ftpmaster.internal/ubuntu bionic/main arm64 libasn1-8-heimdal arm64 7.5.0+dfsg-1 [130 kB] Get:107 http://ftpmaster.internal/ubuntu bionic/main arm64 libheimbase1-heimdal arm64 7.5.0+dfsg-1 [24.9 kB] Get:108 http://ftpmaster.internal/ubuntu bionic/main arm64 libhcrypto4-heimdal arm64 7.5.0+dfsg-1 [76.4 kB] Get:109 http://ftpmaster.internal/ubuntu bionic/main arm64 libwind0-heimdal arm64 7.5.0+dfsg-1 [47.0 kB] Get:110 http://ftpmaster.internal/ubuntu bionic/main arm64 libhx509-5-heimdal arm64 7.5.0+dfsg-1 [88.5 kB] Get:111 http://ftpmaster.internal/ubuntu bionic/main arm64 libkrb5-26-heimdal arm64 7.5.0+dfsg-1 [170 kB] Get:112 http://ftpmaster.internal/ubuntu bionic/main arm64 libheimntlm0-heimdal arm64 7.5.0+dfsg-1 [13.3 kB] Get:113 http://ftpmaster.internal/ubuntu bionic/main arm64 libgssapi3-heimdal arm64 7.5.0+dfsg-1 [79.1 kB] Get:114 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libssl1.0.0 arm64 1.0.2n-1ubuntu1 [721 kB] Get:115 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 multiarch-support arm64 2.26-0ubuntu3 [6916 B] Get:116 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 openssl arm64 1.0.2n-1ubuntu1 [469 kB] Get:117 http://ftpmaster.internal/ubuntu bionic/main arm64 tzdata all 2017c-1 [188 kB] Get:118 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libgssapi-krb5-2 arm64 1.15.2-2 [101 kB] Get:119 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libkrb5-3 arm64 1.15.2-2 [240 kB] Get:120 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libkrb5support0 arm64 1.15.2-2 [28.5 kB] Get:121 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libk5crypto3 arm64 1.15.2-2 [79.7 kB] Get:122 http://ftpmaster.internal/ubuntu bionic/main arm64 libkeyutils1 arm64 1.5.9-9.2ubuntu1 [8708 B] Get:123 http://ftpmaster.internal/ubuntu bionic/main arm64 libidn2-0 arm64 2.0.4-1 [89.1 kB] Get:124 http://ftpmaster.internal/ubuntu bionic/main arm64 libpng16-16 arm64 1.6.34-1 [161 kB] Get:125 http://ftpmaster.internal/ubuntu bionic-proposed/universe arm64 apt-transport-https all 1.6~alpha7 [1692 B] Get:126 http://ftpmaster.internal/ubuntu bionic/main arm64 dpkg-dev all 1.19.0.4ubuntu1 [607 kB] Get:127 http://ftpmaster.internal/ubuntu bionic/main arm64 libdpkg-perl all 1.19.0.4ubuntu1 [211 kB] Get:128 http://ftpmaster.internal/ubuntu bionic/main arm64 build-essential arm64 12.4ubuntu1 [4754 B] Get:129 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libfakeroot arm64 1.22-2ubuntu1 [21.8 kB] Get:130 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 fakeroot arm64 1.22-2ubuntu1 [59.9 kB] Get:131 http://ftpmaster.internal/ubuntu bionic/main arm64 libnghttp2-14 arm64 1.29.0-1 [68.7 kB] Get:132 http://ftpmaster.internal/ubuntu bionic/main arm64 libpsl5 arm64 0.19.1-4 [40.3 kB] Get:133 http://ftpmaster.internal/ubuntu bionic/main arm64 libcurl3-gnutls arm64 7.57.0-1ubuntu1 [177 kB] Get:134 http://ftpmaster.internal/ubuntu bionic/main arm64 liblockfile-bin arm64 1.14-1.1 [11.1 kB] Get:135 http://ftpmaster.internal/ubuntu bionic/main arm64 liblockfile1 arm64 1.14-1.1 [6192 B] Get:136 http://ftpmaster.internal/ubuntu bionic/main arm64 optipng arm64 0.7.6-1.1 [78.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 55.5 MB in 5s (11.1 MB/s) (Reading database ... 12563 files and directories currently installed.) 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Setting up sensible-utils (0.0.11) ... Processing triggers for libc-bin (2.26-0ubuntu3) ... Setting up libperl5.26:arm64 (5.26.1-4) ... Setting up libheimbase1-heimdal:arm64 (7.5.0+dfsg-1) ... Setting up libfakeroot:arm64 (1.22-2ubuntu1) ... Setting up libsqlite3-0:arm64 (3.21.0-1) ... Setting up libc-dev-bin (2.26-0ubuntu3) ... Setting up libkeyutils1:arm64 (1.5.9-9.2ubuntu1) ... Setting up libc6-dev:arm64 (2.26-0ubuntu3) ... Setting up libassuan0:arm64 (2.5.1-1) ... Setting up libitm1:arm64 (7.2.0-19ubuntu1) ... Setting up libk5crypto3:arm64 (1.15.2-2) ... Setting up libwind0-heimdal:arm64 (7.5.0+dfsg-1) ... Setting up libbinutils:arm64 (2.29.1-13ubuntu1) ... Setting up init (1.51) ... Setting up libasn1-8-heimdal:arm64 (7.5.0+dfsg-1) ... Setting up gpgconf (2.2.4-1ubuntu1) ... Setting up libhcrypto4-heimdal:arm64 (7.5.0+dfsg-1) ... Setting up fakeroot (1.22-2ubuntu1) ... Setting up libhx509-5-heimdal:arm64 (7.5.0+dfsg-1) ... Setting up libgcc-7-dev:arm64 (7.2.0-19ubuntu1) ... Setting up libstdc++-7-dev:arm64 (7.2.0-19ubuntu1) ... Setting up perl (5.26.1-4) ... Setting up binutils-aarch64-linux-gnu (2.29.1-13ubuntu1) ... Setting up gpgsm (2.2.4-1ubuntu1) ... Setting up openssl (1.0.2n-1ubuntu1) ... Setting up gnupg-utils (2.2.4-1ubuntu1) ... Setting up pinentry-curses (1.0.0-3) ... Setting up libkrb5-3:arm64 (1.15.2-2) ... Setting up binutils (2.29.1-13ubuntu1) ... Setting up libkrb5-26-heimdal:arm64 (7.5.0+dfsg-1) ... Setting up dirmngr (2.2.4-1ubuntu1) ... Setting up libheimntlm0-heimdal:arm64 (7.5.0+dfsg-1) ... Setting up gpg (2.2.4-1ubuntu1) ... Setting up gcc-7 (7.2.0-19ubuntu1) ... Setting up g++-7 (7.2.0-19ubuntu1) ... Setting up libdpkg-perl (1.19.0.4ubuntu1) ... Setting up gpg-agent (2.2.4-1ubuntu1) ... Installing new version of config file /etc/X11/Xsession.d/90gpg-agent ... Setting up gpg-wks-server (2.2.4-1ubuntu1) ... Setting up gpg-wks-client (2.2.4-1ubuntu1) ... Setting up libgssapi-krb5-2:arm64 (1.15.2-2) ... Setting up dpkg-dev (1.19.0.4ubuntu1) ... Setting up gnupg-agent (2.2.4-1ubuntu1) ... Setting up libgssapi3-heimdal:arm64 (7.5.0+dfsg-1) ... Setting up build-essential (12.4ubuntu1) ... Setting up libcurl3-gnutls:arm64 (7.57.0-1ubuntu1) ... Setting up gnupg (2.2.4-1ubuntu1) ... Processing triggers for libc-bin (2.26-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-14229464 arm64 bionic-proposed -c chroot:build-PACKAGEBUILD-14229464 --arch=arm64 --dist=bionic-proposed --nolog gromacs_2018-1.dsc Initiating build PACKAGEBUILD-14229464 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-109-generic #132-Ubuntu SMP Tue Jan 9 20:00:40 UTC 2018 aarch64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-026.buildd +==============================================================================+ | gromacs 2018-1 (arm64) 20 Jan 2018 22:29 | +==============================================================================+ Package: gromacs Version: 2018-1 Source Version: 2018-1 Distribution: bionic-proposed Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 I: NOTICE: Log filtering will replace 'build/gromacs-7NRucJ/gromacs-2018' with '<>' I: NOTICE: Log filtering will replace 'build/gromacs-7NRucJ' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-14229464/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- gromacs_2018-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-HJ5zMD/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-HJ5zMD/apt_archive ./ InRelease Get:2 copy:/<>/resolver-HJ5zMD/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-HJ5zMD/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-HJ5zMD/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-HJ5zMD/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (22.8 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: gnupg-agent libcurl3-gnutls libgssapi-krb5-2 libidn2-0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libnghttp2-14 libpsl5 librtmp1 libunistring0 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-HJ5zMD/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (35.5 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12724 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: chrpath, cmake, debhelper (>= 10), libblas-dev, libboost-dev, libfftw3-dev, liblapack-dev, libmpich-dev (>= 3.0.4-6), libopenmpi-dev (>= 1.10.2-7), libtinyxml-dev, libx11-dev, mpich, openmpi-bin, zlib1g-dev Filtered Build-Depends: chrpath, cmake, debhelper (>= 10), libblas-dev, libboost-dev, libfftw3-dev, liblapack-dev, libmpich-dev (>= 3.0.4-6), libopenmpi-dev (>= 1.10.2-7), libtinyxml-dev, libx11-dev, mpich, openmpi-bin, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-gromacs-dummy' in '/<>/resolver-a8Vh_l/apt_archive/sbuild-build-depends-gromacs-dummy.deb'. Ign:1 copy:/<>/resolver-a8Vh_l/apt_archive ./ InRelease Get:2 copy:/<>/resolver-a8Vh_l/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-a8Vh_l/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-a8Vh_l/apt_archive ./ Sources [301 B] Get:5 copy:/<>/resolver-a8Vh_l/apt_archive ./ Packages [621 B] Fetched 3041 B in 0s (22.6 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install gromacs build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: gnupg-agent libcurl3-gnutls Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils chrpath cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base hwloc-nox ibverbs-providers intltool-debian libarchive-zip-perl libarchive13 libblas-dev libblas3 libboost-dev libboost1.65-dev libbsd0 libcroco3 libcurl3 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-stripnondeterminism-perl libfreetype6 libgfortran-7-dev libgfortran4 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu-le-hb0 libicu60 libjsoncpp1 liblapack-dev liblapack3 libltdl-dev libltdl7 liblzo2-2 libmagic-mgc libmagic1 libmpich-dev libmpich12 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpipeline1 libpthread-stubs0-dev librhash0 libsigsegv2 libtimedate-perl libtinyxml-dev libtinyxml2.6.2v5 libtool libuv1 libx11-6 libx11-data libx11-dev libxau-dev libxau6 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxml2 m4 man-db mpich ocl-icd-libopencl1 openmpi-bin openmpi-common po-debconf x11proto-core-dev x11proto-input-dev x11proto-kb-dev xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation ninja-build dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff lrzip liblapack-doc libboost-doc libboost1.65-doc libboost-atomic1.65-dev libboost-chrono1.65-dev libboost-container1.65-dev libboost-context1.65-dev libboost-coroutine1.65-dev libboost-date-time1.65-dev libboost-exception1.65-dev libboost-fiber1.65-dev libboost-filesystem1.65-dev libboost-graph1.65-dev libboost-graph-parallel1.65-dev libboost-iostreams1.65-dev libboost-locale1.65-dev libboost-log1.65-dev libboost-math1.65-dev libboost-mpi1.65-dev libboost-mpi-python1.65-dev libboost-numpy1.65-dev libboost-program-options1.65-dev libboost-python1.65-dev libboost-random1.65-dev libboost-regex1.65-dev libboost-serialization1.65-dev libboost-signals1.65-dev libboost-stacktrace1.65-dev libboost-system1.65-dev libboost-test1.65-dev libboost-thread1.65-dev libboost-timer1.65-dev libboost-type-erasure1.65-dev libboost-wave1.65-dev libboost1.65-tools-dev libmpfrc++-dev libntl-dev libfftw3-doc libhwloc-contrib-plugins libtool-doc openmpi-doc pciutils libtinyxml-doc gcj-jdk libxcb-doc m4-doc less www-browser apparmor blcr-util mpich-doc opencl-icd libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libx11-doc libmail-sendmail-perl The following packages will be REMOVED: pkg-create-dbgsym* The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils chrpath cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base hwloc-nox ibverbs-providers intltool-debian libarchive-zip-perl libarchive13 libblas-dev libblas3 libboost-dev libboost1.65-dev libbsd0 libcroco3 libcurl3 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-stripnondeterminism-perl libfreetype6 libgfortran-7-dev libgfortran4 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu-le-hb0 libicu60 libjsoncpp1 liblapack-dev liblapack3 libltdl-dev libltdl7 liblzo2-2 libmagic-mgc libmagic1 libmpich-dev libmpich12 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpipeline1 libpthread-stubs0-dev librhash0 libsigsegv2 libtimedate-perl libtinyxml-dev libtinyxml2.6.2v5 libtool libuv1 libx11-6 libx11-data libx11-dev libxau-dev libxau6 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxml2 m4 man-db mpich ocl-icd-libopencl1 openmpi-bin openmpi-common po-debconf sbuild-build-depends-gromacs-dummy x11proto-core-dev x11proto-input-dev x11proto-kb-dev xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 99 newly installed, 1 to remove and 0 not upgraded. Need to get 49.5 MB of archives. After this operation, 297 MB of additional disk space will be used. Get:1 copy:/<>/resolver-a8Vh_l/apt_archive ./ sbuild-build-depends-gromacs-dummy 0.invalid.0 [948 B] Get:2 http://ftpmaster.internal/ubuntu bionic/main arm64 libxau6 arm64 1:1.0.8-1 [7590 B] Get:3 http://ftpmaster.internal/ubuntu bionic/main arm64 groff-base arm64 1.22.3-9 [1129 kB] Get:4 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libbsd0 arm64 0.8.7-1 [36.4 kB] Get:5 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 bsdmainutils arm64 11.1.2ubuntu1 [175 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main arm64 libpipeline1 arm64 1.5.0-1 [22.0 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/main arm64 man-db arm64 2.7.6.1-4 [873 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/main arm64 cmake-data all 3.9.5-1 [1268 kB] Get:9 http://ftpmaster.internal/ubuntu bionic/main arm64 liblzo2-2 arm64 2.08-1.2 [42.2 kB] Get:10 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libfreetype6 arm64 2.8.1-0.1ubuntu2 [289 kB] Get:11 http://ftpmaster.internal/ubuntu bionic/main arm64 libglib2.0-0 arm64 2.54.1-1ubuntu1 [980 kB] Get:12 http://ftpmaster.internal/ubuntu bionic/main arm64 libgraphite2-3 arm64 1.3.10-8 [65.7 kB] Get:13 http://ftpmaster.internal/ubuntu bionic/main arm64 libharfbuzz0b arm64 1.7.2-1 [207 kB] Get:14 http://ftpmaster.internal/ubuntu bionic/main arm64 libicu-le-hb0 arm64 1.0.3+git161113-4 [14.4 kB] Get:15 http://ftpmaster.internal/ubuntu bionic/main arm64 libicu60 arm64 60.2-1ubuntu1 [7998 kB] Get:16 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libxml2 arm64 2.9.4+dfsg1-6.1ubuntu1 [547 kB] Get:17 http://ftpmaster.internal/ubuntu bionic/main arm64 libarchive13 arm64 3.2.2-3.1 [246 kB] Get:18 http://ftpmaster.internal/ubuntu bionic/main arm64 libcurl3 arm64 7.57.0-1ubuntu1 [179 kB] Get:19 http://ftpmaster.internal/ubuntu bionic/main arm64 libexpat1 arm64 2.2.5-3 [69.2 kB] Get:20 http://ftpmaster.internal/ubuntu bionic/main arm64 libjsoncpp1 arm64 1.7.4-3 [69.2 kB] Get:21 http://ftpmaster.internal/ubuntu bionic/main arm64 librhash0 arm64 1.3.4-3 [71.0 kB] Get:22 http://ftpmaster.internal/ubuntu bionic/main arm64 libuv1 arm64 1.18.0-3 [53.7 kB] Get:23 http://ftpmaster.internal/ubuntu bionic/main arm64 cmake arm64 3.9.5-1 [2921 kB] Get:24 http://ftpmaster.internal/ubuntu bionic/main arm64 libmagic-mgc arm64 1:5.32-1 [184 kB] Get:25 http://ftpmaster.internal/ubuntu bionic/main arm64 libmagic1 arm64 1:5.32-1 [61.7 kB] Get:26 http://ftpmaster.internal/ubuntu bionic/main arm64 file arm64 1:5.32-1 [21.6 kB] Get:27 http://ftpmaster.internal/ubuntu bionic/main arm64 gettext-base arm64 0.19.8.1-4ubuntu2 [46.4 kB] Get:28 http://ftpmaster.internal/ubuntu bionic/main arm64 libnuma1 arm64 2.0.11-2.1 [19.1 kB] Get:29 http://ftpmaster.internal/ubuntu bionic/main arm64 libxdmcp6 arm64 1:1.1.2-3 [9694 B] Get:30 http://ftpmaster.internal/ubuntu bionic/main arm64 libxcb1 arm64 1.12-1ubuntu1 [37.0 kB] Get:31 http://ftpmaster.internal/ubuntu bionic/main arm64 libx11-data all 2:1.6.4-3 [114 kB] Get:32 http://ftpmaster.internal/ubuntu bionic/main arm64 libx11-6 arm64 2:1.6.4-3 [515 kB] Get:33 http://ftpmaster.internal/ubuntu bionic/main arm64 libsigsegv2 arm64 2.11-1 [12.5 kB] Get:34 http://ftpmaster.internal/ubuntu bionic/main arm64 m4 arm64 1.4.18-1 [185 kB] Get:35 http://ftpmaster.internal/ubuntu bionic/main arm64 autoconf all 2.69-11 [322 kB] Get:36 http://ftpmaster.internal/ubuntu bionic/main arm64 autotools-dev all 20171216.1 [39.7 kB] Get:37 http://ftpmaster.internal/ubuntu bionic/main arm64 automake all 1:1.15.1-3ubuntu1 [509 kB] Get:38 http://ftpmaster.internal/ubuntu bionic/main arm64 autopoint all 0.19.8.1-4ubuntu2 [412 kB] Get:39 http://ftpmaster.internal/ubuntu bionic/universe arm64 chrpath arm64 0.16-2 [12.1 kB] Get:40 http://ftpmaster.internal/ubuntu bionic/main arm64 libtool all 2.4.6-2 [194 kB] Get:41 http://ftpmaster.internal/ubuntu bionic/main arm64 dh-autoreconf all 15 [15.8 kB] Get:42 http://ftpmaster.internal/ubuntu bionic/main arm64 libarchive-zip-perl all 1.60-1 [83.9 kB] Get:43 http://ftpmaster.internal/ubuntu bionic/main arm64 libfile-stripnondeterminism-perl all 0.040-1 [13.9 kB] Get:44 http://ftpmaster.internal/ubuntu bionic/main arm64 libtimedate-perl all 2.3000-2 [37.5 kB] Get:45 http://ftpmaster.internal/ubuntu bionic/main arm64 dh-strip-nondeterminism all 0.040-1 [5196 B] Get:46 http://ftpmaster.internal/ubuntu bionic/main arm64 libcroco3 arm64 0.6.12-2 [68.2 kB] Get:47 http://ftpmaster.internal/ubuntu bionic/main arm64 gettext arm64 0.19.8.1-4ubuntu2 [1027 kB] Get:48 http://ftpmaster.internal/ubuntu bionic/main arm64 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:49 http://ftpmaster.internal/ubuntu bionic/main arm64 po-debconf all 1.0.20 [232 kB] Get:50 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 debhelper all 11.1.2ubuntu1 [900 kB] Get:51 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libgfortran4 arm64 7.2.0-19ubuntu1 [248 kB] Get:52 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libgfortran-7-dev arm64 7.2.0-19ubuntu1 [298 kB] Get:53 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 gfortran-7 arm64 7.2.0-19ubuntu1 [5694 kB] Get:54 http://ftpmaster.internal/ubuntu bionic/main arm64 gfortran arm64 4:7.2.0-1ubuntu1 [1270 B] Get:55 http://ftpmaster.internal/ubuntu bionic/main arm64 libnl-3-200 arm64 3.2.29-0ubuntu3 [44.4 kB] Get:56 http://ftpmaster.internal/ubuntu bionic/main arm64 libnl-route-3-200 arm64 3.2.29-0ubuntu3 [116 kB] Get:57 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libibverbs1 arm64 16.1-2 [39.5 kB] Get:58 http://ftpmaster.internal/ubuntu bionic-proposed/universe arm64 ibverbs-providers arm64 16.1-2 [131 kB] Get:59 http://ftpmaster.internal/ubuntu bionic/main arm64 libblas3 arm64 3.7.1-4ubuntu1 [83.1 kB] Get:60 http://ftpmaster.internal/ubuntu bionic/main arm64 libblas-dev arm64 3.7.1-4ubuntu1 [87.2 kB] Get:61 http://ftpmaster.internal/ubuntu bionic/main arm64 libboost1.65-dev arm64 1.65.1+dfsg-0ubuntu4 [7217 kB] Get:62 http://ftpmaster.internal/ubuntu bionic/main arm64 libboost-dev arm64 1.65.1.0ubuntu1 [3128 B] Get:63 http://ftpmaster.internal/ubuntu bionic/main arm64 libfftw3-double3 arm64 3.3.7-1 [317 kB] Get:64 http://ftpmaster.internal/ubuntu bionic/main arm64 libfftw3-long3 arm64 3.3.7-1 [515 kB] Get:65 http://ftpmaster.internal/ubuntu bionic/main arm64 libfftw3-single3 arm64 3.3.7-1 [525 kB] Get:66 http://ftpmaster.internal/ubuntu bionic/main arm64 libfftw3-bin arm64 3.3.7-1 [26.4 kB] Get:67 http://ftpmaster.internal/ubuntu bionic/main arm64 libfftw3-dev arm64 3.3.7-1 [1243 kB] Get:68 http://ftpmaster.internal/ubuntu bionic/main arm64 liblapack3 arm64 3.7.1-4ubuntu1 [1371 kB] Get:69 http://ftpmaster.internal/ubuntu bionic/main arm64 liblapack-dev arm64 3.7.1-4ubuntu1 [1393 kB] Get:70 http://ftpmaster.internal/ubuntu bionic/main arm64 libltdl7 arm64 2.4.6-2 [35.9 kB] Get:71 http://ftpmaster.internal/ubuntu bionic/main arm64 libltdl-dev arm64 2.4.6-2 [160 kB] Get:72 http://ftpmaster.internal/ubuntu bionic/main arm64 libpciaccess0 arm64 0.13.4-1ubuntu1 [15.1 kB] Get:73 http://ftpmaster.internal/ubuntu bionic/main arm64 libpthread-stubs0-dev arm64 0.3-4 [4078 B] Get:74 http://ftpmaster.internal/ubuntu bionic/universe arm64 libtinyxml2.6.2v5 arm64 2.6.2-4 [28.3 kB] Get:75 http://ftpmaster.internal/ubuntu bionic/universe arm64 libtinyxml-dev arm64 2.6.2-4 [43.6 kB] Get:76 http://ftpmaster.internal/ubuntu bionic/main arm64 xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:77 http://ftpmaster.internal/ubuntu bionic/main arm64 x11proto-core-dev all 7.0.31-1 [700 kB] Get:78 http://ftpmaster.internal/ubuntu bionic/main arm64 libxau-dev arm64 1:1.0.8-1 [9768 B] Get:79 http://ftpmaster.internal/ubuntu bionic/main arm64 libxdmcp-dev arm64 1:1.1.2-3 [24.1 kB] Get:80 http://ftpmaster.internal/ubuntu bionic/main arm64 x11proto-input-dev all 2.3.2-1 [118 kB] Get:81 http://ftpmaster.internal/ubuntu bionic/main arm64 x11proto-kb-dev all 1.0.7-1 [226 kB] Get:82 http://ftpmaster.internal/ubuntu bionic/main arm64 xtrans-dev all 1.3.5-1 [70.5 kB] Get:83 http://ftpmaster.internal/ubuntu bionic/main arm64 libxcb1-dev arm64 1.12-1ubuntu1 [74.3 kB] Get:84 http://ftpmaster.internal/ubuntu bionic/main arm64 libx11-dev arm64 2:1.6.4-3 [591 kB] Get:85 http://ftpmaster.internal/ubuntu bionic-proposed/universe arm64 libhwloc5 arm64 1.11.9-1 [84.4 kB] Get:86 http://ftpmaster.internal/ubuntu bionic/main arm64 ocl-icd-libopencl1 arm64 2.2.11-1ubuntu1 [29.2 kB] Get:87 http://ftpmaster.internal/ubuntu bionic-proposed/universe arm64 libhwloc-plugins arm64 1.11.9-1 [11.2 kB] Get:88 http://ftpmaster.internal/ubuntu bionic/universe arm64 libopenmpi2 arm64 2.1.1-7 [1751 kB] Get:89 http://ftpmaster.internal/ubuntu bionic/universe arm64 openmpi-common all 2.1.1-7 [140 kB] Get:90 http://ftpmaster.internal/ubuntu bionic/universe arm64 openmpi-bin arm64 2.1.1-7 [81.3 kB] Get:91 http://ftpmaster.internal/ubuntu bionic/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-0ubuntu2 [171 kB] Get:92 http://ftpmaster.internal/ubuntu bionic-proposed/universe arm64 hwloc-nox arm64 1.11.9-1 [143 kB] Get:93 http://ftpmaster.internal/ubuntu bionic/main arm64 libnuma-dev arm64 2.0.11-2.1 [31.0 kB] Get:94 http://ftpmaster.internal/ubuntu bionic-proposed/universe arm64 libhwloc-dev arm64 1.11.9-1 [149 kB] Get:95 http://ftpmaster.internal/ubuntu bionic-proposed/main arm64 libibverbs-dev arm64 16.1-2 [102 kB] Get:96 http://ftpmaster.internal/ubuntu bionic/universe arm64 libmpich12 arm64 3.3~a2-4 [740 kB] Get:97 http://ftpmaster.internal/ubuntu bionic/universe arm64 libmpich-dev arm64 3.3~a2-4 [1196 kB] Get:98 http://ftpmaster.internal/ubuntu bionic/universe arm64 libopenmpi-dev arm64 2.1.1-7 [918 kB] Get:99 http://ftpmaster.internal/ubuntu bionic/universe arm64 mpich arm64 3.3~a2-4 [160 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 49.5 MB in 7s (7572 kB/s) (Reading database ... 12724 files and directories currently installed.) Removing pkg-create-dbgsym (0.73) ... Selecting previously unselected package libxau6:arm64. (Reading database ... 12715 files and directories currently installed.) Preparing to unpack .../00-libxau6_1%3a1.0.8-1_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.8-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../01-groff-base_1.22.3-9_arm64.deb ... Unpacking groff-base (1.22.3-9) ... Selecting previously unselected package libbsd0:arm64. Preparing to unpack .../02-libbsd0_0.8.7-1_arm64.deb ... Unpacking libbsd0:arm64 (0.8.7-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../03-bsdmainutils_11.1.2ubuntu1_arm64.deb ... Unpacking bsdmainutils (11.1.2ubuntu1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../04-libpipeline1_1.5.0-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.0-1) ... Selecting previously unselected package man-db. 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Selecting previously unselected package libibverbs-dev:arm64. Preparing to unpack .../93-libibverbs-dev_16.1-2_arm64.deb ... Unpacking libibverbs-dev:arm64 (16.1-2) ... Selecting previously unselected package libmpich12:arm64. Preparing to unpack .../94-libmpich12_3.3~a2-4_arm64.deb ... Unpacking libmpich12:arm64 (3.3~a2-4) ... Selecting previously unselected package libmpich-dev. Preparing to unpack .../95-libmpich-dev_3.3~a2-4_arm64.deb ... Unpacking libmpich-dev (3.3~a2-4) ... Selecting previously unselected package libopenmpi-dev. Preparing to unpack .../96-libopenmpi-dev_2.1.1-7_arm64.deb ... Unpacking libopenmpi-dev (2.1.1-7) ... Selecting previously unselected package mpich. Preparing to unpack .../97-mpich_3.3~a2-4_arm64.deb ... Unpacking mpich (3.3~a2-4) ... Selecting previously unselected package sbuild-build-depends-gromacs-dummy. Preparing to unpack .../98-sbuild-build-depends-gromacs-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-gromacs-dummy (0.invalid.0) ... Setting up chrpath (0.16-2) ... Setting up libexpat1:arm64 (2.2.5-3) ... Setting up libmpich12:arm64 (3.3~a2-4) ... Setting up libtinyxml2.6.2v5:arm64 (2.6.2-4) ... Setting up libarchive-zip-perl (1.60-1) ... Setting up libtinyxml-dev:arm64 (2.6.2-4) ... Setting up libgfortran4:arm64 (7.2.0-19ubuntu1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsigsegv2:arm64 (2.11-1) ... Setting up libpthread-stubs0-dev:arm64 (0.3-4) ... Setting up libcurl3:arm64 (7.57.0-1ubuntu1) ... Setting up libuv1:arm64 (1.18.0-3) ... Setting up libnuma1:arm64 (2.0.11-2.1) ... Setting up groff-base (1.22.3-9) ... Setting up libglib2.0-0:arm64 (2.54.1-1ubuntu1) ... No schema files found: doing nothing. Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up gettext-base (0.19.8.1-4ubuntu2) ... Setting up cmake-data (3.9.5-1) ... Setting up libpipeline1:arm64 (1.5.0-1) ... Setting up x11proto-kb-dev (1.0.7-1) ... Setting up m4 (1.4.18-1) ... Setting up libfftw3-double3:arm64 (3.3.7-1) ... Setting up libbsd0:arm64 (0.8.7-1) ... Setting up libfreetype6:arm64 (2.8.1-0.1ubuntu2) ... Setting up libmagic-mgc (1:5.32-1) ... Setting up libmagic1:arm64 (1:5.32-1) ... Setting up libgraphite2-3:arm64 (1.3.10-8) ... Setting up librhash0 (1.3.4-3) ... Setting up xtrans-dev (1.3.5-1) ... Setting up libblas3:arm64 (3.7.1-4ubuntu1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up openmpi-common (2.1.1-7) ... Processing triggers for libc-bin (2.26-0ubuntu3) ... Setting up autotools-dev (20171216.1) ... Setting up libltdl7:arm64 (2.4.6-2) ... Setting up libgfortran-7-dev:arm64 (7.2.0-19ubuntu1) ... Setting up libpciaccess0:arm64 (0.13.4-1ubuntu1) ... Setting up libfftw3-single3:arm64 (3.3.7-1) ... Setting up gfortran-7 (7.2.0-19ubuntu1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up libnuma-dev:arm64 (2.0.11-2.1) ... Setting up ocl-icd-libopencl1:arm64 (2.2.11-1ubuntu1) ... Setting up bsdmainutils (11.1.2ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libnl-3-200:arm64 (3.2.29-0ubuntu3) ... Setting up libfftw3-long3:arm64 (3.3.7-1) ... Setting up libboost1.65-dev:arm64 (1.65.1+dfsg-0ubuntu4) ... Setting up libx11-data (2:1.6.4-3) ... Setting up libxau6:arm64 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-4ubuntu2) ... Setting up liblzo2-2:arm64 (2.08-1.2) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (0.040-1) ... Setting up libjsoncpp1:arm64 (1.7.4-3) ... Setting up gfortran (4:7.2.0-1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libfftw3-bin (3.3.7-1) ... Setting up x11proto-core-dev (7.0.31-1) ... Setting up libltdl-dev:arm64 (2.4.6-2) ... Setting up libblas-dev:arm64 (3.7.1-4ubuntu1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode Setting up liblapack3:arm64 (3.7.1-4ubuntu1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libharfbuzz0b:arm64 (1.7.2-1) ... Setting up libxau-dev:arm64 (1:1.0.8-1) ... Setting up libnl-route-3-200:arm64 (3.2.29-0ubuntu3) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.32-1) ... Setting up libhwloc5:arm64 (1.11.9-1) ... Setting up libmpich-dev (3.3~a2-4) ... update-alternatives: using /usr/include/mpich to provide /usr/include/mpi (mpi) in auto mode Setting up libxdmcp-dev:arm64 (1:1.1.2-3) ... Setting up libfftw3-dev:arm64 (3.3.7-1) ... Setting up automake (1:1.15.1-3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.7.6.1-4) ... Not building database; man-db/auto-update is not 'true'. Setting up libboost-dev:arm64 (1.65.1.0ubuntu1) ... Setting up libxcb1:arm64 (1.12-1ubuntu1) ... Setting up x11proto-input-dev (2.3.2-1) ... Setting up liblapack-dev:arm64 (3.7.1-4ubuntu1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode Setting up libtool (2.4.6-2) ... Setting up hwloc-nox (1.11.9-1) ... Setting up libibverbs1:arm64 (16.1-2) ... Setting up mpich (3.3~a2-4) ... update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode Setting up libhwloc-dev:arm64 (1.11.9-1) ... Setting up libx11-6:arm64 (2:1.6.4-3) ... Setting up ibverbs-providers:arm64 (16.1-2) ... Setting up libxcb1-dev:arm64 (1.12-1ubuntu1) ... Setting up libx11-dev:arm64 (2:1.6.4-3) ... Setting up libibverbs-dev:arm64 (16.1-2) ... Setting up libicu-le-hb0:arm64 (1.0.3+git161113-4) ... Setting up dh-strip-nondeterminism (0.040-1) ... Setting up libicu60:arm64 (60.2-1ubuntu1) ... Setting up libxml2:arm64 (2.9.4+dfsg1-6.1ubuntu1) ... Setting up libcroco3:arm64 (0.6.12-2) ... Setting up libhwloc-plugins (1.11.9-1) ... Setting up libopenmpi2:arm64 (2.1.1-7) ... Setting up gettext (0.19.8.1-4ubuntu2) ... Setting up libarchive13:arm64 (3.2.2-3.1) ... Setting up libopenmpi-dev (2.1.1-7) ... update-alternatives: renaming libmpi.so slave link from /usr/lib/libmpi.so to /usr/lib/aarch64-linux-gnu/libmpi.so update-alternatives: renaming libmpi++.so slave link from /usr/lib/libmpi++.so to /usr/lib/aarch64-linux-gnu/libmpi++.so update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up openmpi-bin (2.1.1-7) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode Setting up intltool-debian (0.35.0+20060710.4) ... Setting up cmake (3.9.5-1) ... Setting up po-debconf (1.0.20) ... Setting up debhelper (11.1.2ubuntu1) ... Setting up dh-autoreconf (15) ... Setting up sbuild-build-depends-gromacs-dummy (0.invalid.0) ... (Reading database ... 32771 files and directories currently installed.) Purging configuration files for pkg-create-dbgsym (0.73) ... Processing triggers for libc-bin (2.26-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-109-generic arm64 (aarch64) Toolchain package versions: binutils_2.29.1-13ubuntu1 dpkg-dev_1.19.0.4ubuntu1 g++-7_7.2.0-19ubuntu1 gcc-7_7.2.0-19ubuntu1 libc6-dev_2.26-0ubuntu3 libstdc++-7-dev_7.2.0-19ubuntu1 libstdc++6_7.2.0-19ubuntu1 linux-libc-dev_4.13.0-30.33 Package versions: adduser_3.116ubuntu1 advancecomp_2.0-1 apt_1.6~alpha7 apt-transport-https_1.6~alpha7 autoconf_2.69-11 automake_1:1.15.1-3ubuntu1 autopoint_0.19.8.1-4ubuntu2 autotools-dev_20171216.1 base-files_10ubuntu1 base-passwd_3.5.44 bash_4.4-5ubuntu1 binutils_2.29.1-13ubuntu1 binutils-aarch64-linux-gnu_2.29.1-13ubuntu1 binutils-common_2.29.1-13ubuntu1 bsdmainutils_11.1.2ubuntu1 bsdutils_1:2.30.2-0.1ubuntu1 build-essential_12.4ubuntu1 bzip2_1.0.6-8.1 ca-certificates_20170717 chrpath_0.16-2 cmake_3.9.5-1 cmake-data_3.9.5-1 coreutils_8.28-1ubuntu1 cpp_4:7.2.0-1ubuntu1 cpp-7_7.2.0-19ubuntu1 dash_0.5.8-2.5ubuntu1 debconf_1.5.65 debhelper_11.1.2ubuntu1 debianutils_4.8.4 dh-autoreconf_15 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dirmngr_2.2.4-1ubuntu1 dmsetup_2:1.02.137-2ubuntu3 dpkg_1.19.0.4ubuntu1 dpkg-dev_1.19.0.4ubuntu1 e2fslibs_1.43.8-2 e2fsprogs_1.43.8-2 fakeroot_1.22-2ubuntu1 fdisk_2.30.2-0.1ubuntu1 file_1:5.32-1 findutils_4.6.0+git+20170828-2 g++_4:7.2.0-1ubuntu1 g++-7_7.2.0-19ubuntu1 gcc_4:7.2.0-1ubuntu1 gcc-7_7.2.0-19ubuntu1 gcc-7-base_7.2.0-19ubuntu1 gettext_0.19.8.1-4ubuntu2 gettext-base_0.19.8.1-4ubuntu2 gfortran_4:7.2.0-1ubuntu1 gfortran-7_7.2.0-19ubuntu1 gnupg_2.2.4-1ubuntu1 gnupg-agent_2.2.4-1ubuntu1 gnupg-l10n_2.2.4-1ubuntu1 gnupg-utils_2.2.4-1ubuntu1 gpg_2.2.4-1ubuntu1 gpg-agent_2.2.4-1ubuntu1 gpg-wks-client_2.2.4-1ubuntu1 gpg-wks-server_2.2.4-1ubuntu1 gpgconf_2.2.4-1ubuntu1 gpgsm_2.2.4-1ubuntu1 gpgv_2.2.4-1ubuntu1 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5ubuntu1 hostname_3.18 hwloc-nox_1.11.9-1 ibverbs-providers_16.1-2 init_1.51 init-system-helpers_1.51 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.11.0-2ubuntu19 libapt-pkg5.0_1.6~alpha7 libarchive-zip-perl_1.60-1 libarchive13_3.2.2-3.1 libasan4_7.2.0-19ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-1 libassuan0_2.5.1-1 libatomic1_7.2.0-19ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.7.7-1ubuntu2 libaudit1_1:2.7.7-1ubuntu2 libbinutils_2.29.1-13ubuntu1 libblas-dev_3.7.1-4ubuntu1 libblas3_3.7.1-4ubuntu1 libblkid1_2.30.2-0.1ubuntu1 libboost-dev_1.65.1.0ubuntu1 libboost1.65-dev_1.65.1+dfsg-0ubuntu4 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.26-0ubuntu3 libc-dev-bin_2.26-0ubuntu3 libc6_2.26-0ubuntu3 libc6-dev_2.26-0ubuntu3 libcap-ng0_0.7.7-3.1 libcap2_1:2.25-1.2 libcc1-0_7.2.0-19ubuntu1 libcomerr2_1.43.8-2 libcroco3_0.6.12-2 libcryptsetup4_2:1.7.5-1ubuntu1 libcurl3_7.57.0-1ubuntu1 libcurl3-gnutls_7.57.0-1ubuntu1 libdb5.3_5.3.28-13.1 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.137-2ubuntu3 libdpkg-perl_1.19.0.4ubuntu1 libexpat1_2.2.5-3 libfakeroot_1.22-2ubuntu1 libfdisk1_2.30.2-0.1ubuntu1 libffi6_3.2.1-8 libfftw3-bin_3.3.7-1 libfftw3-dev_3.3.7-1 libfftw3-double3_3.3.7-1 libfftw3-long3_3.3.7-1 libfftw3-single3_3.3.7-1 libfile-stripnondeterminism-perl_0.040-1 libfreetype6_2.8.1-0.1ubuntu2 libgcc-7-dev_7.2.0-19ubuntu1 libgcc1_1:7.2.0-19ubuntu1 libgcrypt20_1.8.1-4 libgdbm3_1.8.3-14 libgfortran-7-dev_7.2.0-19ubuntu1 libgfortran4_7.2.0-19ubuntu1 libglib2.0-0_2.54.1-1ubuntu1 libgmp10_2:6.1.2+dfsg-1.2 libgnutls30_3.5.8-6ubuntu3 libgomp1_7.2.0-19ubuntu1 libgpg-error0_1.27-5 libgraphite2-3_1.3.10-8 libgssapi-krb5-2_1.15.2-2 libgssapi3-heimdal_7.5.0+dfsg-1 libharfbuzz0b_1.7.2-1 libhcrypto4-heimdal_7.5.0+dfsg-1 libheimbase1-heimdal_7.5.0+dfsg-1 libheimntlm0-heimdal_7.5.0+dfsg-1 libhogweed4_3.4-1 libhwloc-dev_1.11.9-1 libhwloc-plugins_1.11.9-1 libhwloc5_1.11.9-1 libhx509-5-heimdal_7.5.0+dfsg-1 libibverbs-dev_16.1-2 libibverbs1_16.1-2 libicu-le-hb0_1.0.3+git161113-4 libicu60_60.2-1ubuntu1 libidn11_1.33-2.1 libidn2-0_2.0.4-1 libip4tc0_1.6.1-2ubuntu2 libisl15_0.18-1 libitm1_7.2.0-19ubuntu1 libjsoncpp1_1.7.4-3 libk5crypto3_1.15.2-2 libkeyutils1_1.5.9-9.2ubuntu1 libkmod2_24-1ubuntu2 libkrb5-26-heimdal_7.5.0+dfsg-1 libkrb5-3_1.15.2-2 libkrb5support0_1.15.2-2 libksba8_1.3.5-2 liblapack-dev_3.7.1-4ubuntu1 liblapack3_3.7.1-4ubuntu1 libldap-2.4-2_2.4.45+dfsg-1ubuntu1 libldap-common_2.4.45+dfsg-1ubuntu1 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblsan0_7.2.0-19ubuntu1 libltdl-dev_2.4.6-2 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.2.2-1.3 liblzo2-2_2.08-1.2 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmount1_2.30.2-0.1ubuntu1 libmpc3_1.0.3-2 libmpfr4_3.1.6-1 libmpich-dev_3.3~a2-4 libmpich12_3.3~a2-4 libncurses5_6.0+20171125-1ubuntu1 libncursesw5_6.0+20171125-1ubuntu1 libnettle6_3.4-1 libnghttp2-14_1.29.0-1 libnl-3-200_3.2.29-0ubuntu3 libnl-route-3-200_3.2.29-0ubuntu3 libnpth0_1.5-3 libnuma-dev_2.0.11-2.1 libnuma1_2.0.11-2.1 libopenmpi-dev_2.1.1-7 libopenmpi2_2.1.1-7 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.2ubuntu3 libpam-modules-bin_1.1.8-3.2ubuntu3 libpam-runtime_1.1.8-3.2ubuntu3 libpam0g_1.1.8-3.2ubuntu3 libpciaccess0_0.13.4-1ubuntu1 libpcre3_2:8.39-8 libperl5.26_5.26.1-4 libpipeline1_1.5.0-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-3ubuntu1 libpsl5_0.19.1-4 libpthread-stubs0-dev_0.3-4 libreadline7_7.0-0ubuntu2 librhash0_1.3.4-3 libroken18-heimdal_7.5.0+dfsg-1 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3ubuntu1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3ubuntu1 libseccomp2_2.3.1-2.1ubuntu3 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.11-1 libslang2_2.3.1-5ubuntu1 libsmartcols1_2.30.2-0.1ubuntu1 libsqlite3-0_3.21.0-1 libss2_1.43.8-2 libssl1.0.0_1.0.2n-1ubuntu1 libstdc++-7-dev_7.2.0-19ubuntu1 libstdc++6_7.2.0-19ubuntu1 libsystemd0_235-3ubuntu3 libtasn1-6_4.12-3 libtimedate-perl_2.3000-2 libtinfo5_6.0+20171125-1ubuntu1 libtinyxml-dev_2.6.2-4 libtinyxml2.6.2v5_2.6.2-4 libtool_2.4.6-2 libtsan0_7.2.0-19ubuntu1 libubsan0_7.2.0-19ubuntu1 libudev1_235-3ubuntu3 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-31 libustr-1.0-1_1.0.4-6 libuuid1_2.30.2-0.1ubuntu1 libuv1_1.18.0-3 libwind0-heimdal_7.5.0+dfsg-1 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libx11-dev_2:1.6.4-3 libxau-dev_1:1.0.8-1 libxau6_1:1.0.8-1 libxcb1_1.12-1ubuntu1 libxcb1-dev_1.12-1ubuntu1 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxml2_2.9.4+dfsg1-6.1ubuntu1 linux-libc-dev_4.13.0-30.33 lockfile-progs_0.1.17build1 login_1:4.2-3.2ubuntu4 lsb-base_9.20170808ubuntu1 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-4 mawk_1.3.3-17ubuntu2 mount_2.30.2-0.1ubuntu1 mpich_3.3~a2-4 multiarch-support_2.26-0ubuntu3 ncurses-base_6.0+20171125-1ubuntu1 ncurses-bin_6.0+20171125-1ubuntu1 ocl-icd-libopencl1_2.2.11-1ubuntu1 openmpi-bin_2.1.1-7 openmpi-common_2.1.1-7 openssl_1.0.2n-1ubuntu1 optipng_0.7.6-1.1 passwd_1:4.2-3.2ubuntu4 patch_2.7.5-1build1 perl_5.26.1-4 perl-base_5.26.1-4 perl-modules-5.26_5.26.1-4 pinentry-curses_1.0.0-3 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-3ubuntu1 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gromacs-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.11 systemd_235-3ubuntu3 systemd-sysv_235-3ubuntu3 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu1 tar_1.29b-2 tzdata_2017c-1 ubuntu-keyring_2016.10.27 util-linux_2.30.2-0.1ubuntu1 x11proto-core-dev_7.0.31-1 x11proto-input-dev_2.3.2-1 x11proto-kb-dev_1.0.7-1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Jan 11 18:10:25 2018 UTC gpgv: using RSA key 843E5FA61E6063389876D2E5EE4AFD69EC65108F gpgv: issuer "nbreen@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gromacs_2018-1.dsc dpkg-source: info: extracting gromacs in gromacs-2018 dpkg-source: info: unpacking gromacs_2018.orig.tar.gz dpkg-source: info: unpacking gromacs_2018-1.debian.tar.xz dpkg-source: info: applying readme.patch dpkg-source: info: applying copyright-file.patch dpkg-source: info: applying reproducible-builds.patch dpkg-source: info: applying doxygen.patch dpkg-source: info: applying disable-cpuinfotest.patch dpkg-source: info: applying hurd-disable-numa-test.patch dpkg-source: info: applying gtest-death-test.patch dpkg-source: info: applying mdrun-test-timeout.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-14229464 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-14229464 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-14229464 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package gromacs dpkg-buildpackage: info: source version 2018-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build gromacs-2018 dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh_testdir dh_testroot rm -rf build docs/doxygen/*.pyc dh_clean build-basic build-mpich build-openmpi build-manual configure-stamp \ debian/gromacs-mpich.README.Debian debian/gromacs-openmpi.README.Debian debian/rules build-arch dh_testdir (mkdir -p build/basic; cd build/basic; cmake /<> -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_RULE_MESSAGES=OFF -DCMAKE_INSTALL_PREFIX="/usr" -DCMAKE_EXE_LINKER_FLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" -DCMAKE_SKIP_RPATH=ON -DGMX_EXTERNAL_ZLIB=ON -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI=OFF -DGMX_X11=ON -DBUILD_SHARED_LIBS=ON) -- The C compiler identification is GNU 7.2.0 -- The CXX compiler identification is GNU 7.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Performing Test CXXFLAG_STD_CXX0X -- Performing Test CXXFLAG_STD_CXX0X - Success -- Performing Test CXX11_SUPPORTED -- Performing Test CXX11_SUPPORTED - Success -- Performing Test CXX11_STDLIB_PRESENT -- Performing Test CXX11_STDLIB_PRESENT - Success -- Looking for NVIDIA GPUs present in the system -- Could not detect NVIDIA GPUs -- No compatible CUDA toolkit found (v5.0+), disabling native GPU acceleration -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file regex.h -- Looking for include file regex.h - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- hwloc version: 1.11.9 -- Found Hwloc: /usr/lib/aarch64-linux-gnu/libhwloc.so (found suitable version "1.11.9", minimum required is "1.5") -- Looking for XOpenDisplay in /usr/lib/aarch64-linux-gnu/libX11.so -- Looking for XOpenDisplay in /usr/lib/aarch64-linux-gnu/libX11.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Found X11: /usr/lib/aarch64-linux-gnu/libX11.so -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so - found -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Setting build time - 2018-01-11 06:23:18 -- Setting build host - Linux aarch64 -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 0 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd -- Disabling RDTSCP support -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Looking for C++ include regex -- Looking for C++ include regex - found -- Checking for system XDR support -- Checking for system XDR support - present -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- pkg-config could not detect fftw3f, trying generic detection -- Looking for fftwf_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3f.so - found -- Looking for fftwf_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3f.so - found -- Using external FFT library - FFTW3 -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- Using dynamic plugins (e.g VMD-supported file formats) -- Checking for suitable VMD version -- VMD plugins not found. Path to VMD can be set with VMDDIR. -- Using default binary suffix: "" -- Using default library suffix: "" -- Could NOT find PythonInterp (missing: PYTHON_EXECUTABLE) (Required is at least version "2.7") -- Could NOT find PythonInterp (missing: PYTHON_EXECUTABLE) (Required is at least version "2.7") -- Performing Test HAS_NO_UNUSED_VARIABLE -- Performing Test HAS_NO_UNUSED_VARIABLE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for inttypes.h -- Looking for inttypes.h - found -- Configuring done -- Generating done -- Build files have been written to: /<>/build/basic (mkdir -p build/basic-dp; cd build/basic-dp; cmake /<> -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_RULE_MESSAGES=OFF -DCMAKE_INSTALL_PREFIX="/usr" -DCMAKE_EXE_LINKER_FLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" -DCMAKE_SKIP_RPATH=ON -DGMX_EXTERNAL_ZLIB=ON -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI=OFF -DGMX_X11=ON -DBUILD_SHARED_LIBS=ON -DGMX_DOUBLE=ON) -- The C compiler identification is GNU 7.2.0 -- The CXX compiler identification is GNU 7.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Performing Test CXXFLAG_STD_CXX0X -- Performing Test CXXFLAG_STD_CXX0X - Success -- Performing Test CXX11_SUPPORTED -- Performing Test CXX11_SUPPORTED - Success -- Performing Test CXX11_STDLIB_PRESENT -- Performing Test CXX11_STDLIB_PRESENT - Success CMake Warning at cmake/gmxManageGPU.cmake:57 (message): GPU acceleration is not available in double precision, disabled! Call Stack (most recent call first): CMakeLists.txt:225 (include) -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file regex.h -- Looking for include file regex.h - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- hwloc version: 1.11.9 -- Found Hwloc: /usr/lib/aarch64-linux-gnu/libhwloc.so (found suitable version "1.11.9", minimum required is "1.5") -- Looking for XOpenDisplay in /usr/lib/aarch64-linux-gnu/libX11.so -- Looking for XOpenDisplay in /usr/lib/aarch64-linux-gnu/libX11.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Found X11: /usr/lib/aarch64-linux-gnu/libX11.so -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so - found -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Setting build time - 2018-01-11 06:23:18 -- Setting build host - Linux aarch64 -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 0 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd -- Disabling RDTSCP support -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Looking for C++ include regex -- Looking for C++ include regex - found -- Checking for system XDR support -- Checking for system XDR support - present -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- pkg-config could not detect fftw3, trying generic detection -- Looking for fftw_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3.so - found -- Looking for fftw_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_vsx in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_vsx in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Using external FFT library - FFTW3 -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- Using dynamic plugins (e.g VMD-supported file formats) -- Checking for suitable VMD version -- VMD plugins not found. Path to VMD can be set with VMDDIR. -- Using default binary suffix: "_d" -- Using default library suffix: "_d" -- Could NOT find PythonInterp (missing: PYTHON_EXECUTABLE) (Required is at least version "2.7") -- Could NOT find PythonInterp (missing: PYTHON_EXECUTABLE) (Required is at least version "2.7") -- Performing Test HAS_NO_UNUSED_VARIABLE -- Performing Test HAS_NO_UNUSED_VARIABLE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for inttypes.h -- Looking for inttypes.h - found -- Configuring done -- Generating done -- Build files have been written to: /<>/build/basic-dp (mkdir -p build/mpich; cd build/mpich; CC=/usr/bin/mpicc.mpich CXX=/usr/bin/mpicxx.mpich cmake \ /<> -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_RULE_MESSAGES=OFF -DCMAKE_INSTALL_PREFIX="/usr" -DCMAKE_EXE_LINKER_FLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" -DCMAKE_SKIP_RPATH=ON -DGMX_EXTERNAL_ZLIB=ON -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI=ON -DGMX_X11=OFF -DGMX_DEFAULT_SUFFIX=OFF -DMPIEXEC="/usr/bin/mpiexec.mpich" -DGMX_BUILD_MDRUN_ONLY=ON -DGMX_BINARY_SUFFIX="_mpi.mpich" -DGMX_LIBS_SUFFIX="_mpi.mpich") -- The C compiler identification is GNU 7.2.0 -- The CXX compiler identification is GNU 7.2.0 -- Check for working C compiler: /usr/bin/mpicc.mpich -- Check for working C compiler: /usr/bin/mpicc.mpich -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/mpicxx.mpich -- Check for working CXX compiler: /usr/bin/mpicxx.mpich -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Performing Test CXXFLAG_STD_CXX0X -- Performing Test CXXFLAG_STD_CXX0X - Success -- Performing Test CXX11_SUPPORTED -- Performing Test CXX11_SUPPORTED - Success -- Performing Test CXX11_STDLIB_PRESENT -- Performing Test CXX11_STDLIB_PRESENT - Success -- Looking for NVIDIA GPUs present in the system -- Could not detect NVIDIA GPUs -- No compatible CUDA toolkit found (v5.0+), disabling native GPU acceleration -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file regex.h -- Looking for include file regex.h - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- MPI is not compatible with thread-MPI. Disabling thread-MPI. -- Checking for MPI_IN_PLACE -- Performing Test MPI_IN_PLACE_COMPILE_OK -- Performing Test MPI_IN_PLACE_COMPILE_OK - Success -- Checking for MPI_IN_PLACE - yes -- Defaulting to building static libraries -- hwloc version: 1.11.9 -- Found Hwloc: /usr/lib/aarch64-linux-gnu/libhwloc.so (found suitable version "1.11.9", minimum required is "1.5") -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so - found -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Setting build time - 2018-01-11 06:23:18 -- Setting build host - Linux aarch64 -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 0 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd -- Disabling RDTSCP support -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Looking for C++ include regex -- Looking for C++ include regex - found -- Checking for system XDR support -- Checking for system XDR support - present -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- pkg-config could not detect fftw3f, trying generic detection -- Looking for fftwf_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3f.so - found -- Looking for fftwf_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3f.so - found -- Using external FFT library - FFTW3 -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- GROMACS only supports plugins in a build that uses shared libraries, which can be disabled for various reasons. BUILD_SHARED_LIBS=on and a toolchain that supports dynamic linking is required. (Hint: GMX_PREFER_STATIC_LIBS and GMX_BUILD_MDRUN_ONLY can influence the default BUILD_SHARED_LIBS, so if you need plugins, reconsider those choices.) -- Not using dynamic plugins (e.g VMD-supported file formats) -- Using manually set binary suffix: "_mpi.mpich" -- Using manually set library suffix: "_mpi.mpich" -- Performing Test HAS_NO_UNUSED_VARIABLE -- Performing Test HAS_NO_UNUSED_VARIABLE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for inttypes.h -- Looking for inttypes.h - found -- Configuring done -- Generating done -- Build files have been written to: /<>/build/mpich (mkdir -p build/mpich-dp; cd build/mpich-dp; CC=/usr/bin/mpicc.mpich CXX=/usr/bin/mpicxx.mpich cmake \ /<> -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_RULE_MESSAGES=OFF -DCMAKE_INSTALL_PREFIX="/usr" -DCMAKE_EXE_LINKER_FLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" -DCMAKE_SKIP_RPATH=ON -DGMX_EXTERNAL_ZLIB=ON -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI=ON -DGMX_X11=OFF -DGMX_DEFAULT_SUFFIX=OFF -DMPIEXEC="/usr/bin/mpiexec.mpich" -DGMX_BUILD_MDRUN_ONLY=ON -DGMX_DOUBLE=ON -DGMX_BINARY_SUFFIX="_mpi_d.mpich" -DGMX_LIBS_SUFFIX="_mpi_d.mpich") -- The C compiler identification is GNU 7.2.0 -- The CXX compiler identification is GNU 7.2.0 -- Check for working C compiler: /usr/bin/mpicc.mpich -- Check for working C compiler: /usr/bin/mpicc.mpich -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/mpicxx.mpich -- Check for working CXX compiler: /usr/bin/mpicxx.mpich -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Performing Test CXXFLAG_STD_CXX0X -- Performing Test CXXFLAG_STD_CXX0X - Success -- Performing Test CXX11_SUPPORTED -- Performing Test CXX11_SUPPORTED - Success -- Performing Test CXX11_STDLIB_PRESENT -- Performing Test CXX11_STDLIB_PRESENT - Success CMake Warning at cmake/gmxManageGPU.cmake:57 (message): GPU acceleration is not available in double precision, disabled! Call Stack (most recent call first): CMakeLists.txt:225 (include) -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file regex.h -- Looking for include file regex.h - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- MPI is not compatible with thread-MPI. Disabling thread-MPI. -- Checking for MPI_IN_PLACE -- Performing Test MPI_IN_PLACE_COMPILE_OK -- Performing Test MPI_IN_PLACE_COMPILE_OK - Success -- Checking for MPI_IN_PLACE - yes -- Defaulting to building static libraries -- hwloc version: 1.11.9 -- Found Hwloc: /usr/lib/aarch64-linux-gnu/libhwloc.so (found suitable version "1.11.9", minimum required is "1.5") -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so - found -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Setting build time - 2018-01-11 06:23:18 -- Setting build host - Linux aarch64 -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 0 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd -- Disabling RDTSCP support -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Looking for C++ include regex -- Looking for C++ include regex - found -- Checking for system XDR support -- Checking for system XDR support - present -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- pkg-config could not detect fftw3, trying generic detection -- Looking for fftw_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3.so - found -- Looking for fftw_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_vsx in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_vsx in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Using external FFT library - FFTW3 -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- GROMACS only supports plugins in a build that uses shared libraries, which can be disabled for various reasons. BUILD_SHARED_LIBS=on and a toolchain that supports dynamic linking is required. (Hint: GMX_PREFER_STATIC_LIBS and GMX_BUILD_MDRUN_ONLY can influence the default BUILD_SHARED_LIBS, so if you need plugins, reconsider those choices.) -- Not using dynamic plugins (e.g VMD-supported file formats) -- Using manually set binary suffix: "_mpi_d.mpich" -- Using manually set library suffix: "_mpi_d.mpich" -- Performing Test HAS_NO_UNUSED_VARIABLE -- Performing Test HAS_NO_UNUSED_VARIABLE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for inttypes.h -- Looking for inttypes.h - found -- Configuring done -- Generating done -- Build files have been written to: /<>/build/mpich-dp (mkdir -p build/openmpi; cd build/openmpi; CC=/usr/bin/mpicc.openmpi CXX=/usr/bin/mpicxx.openmpi cmake \ /<> -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_RULE_MESSAGES=OFF -DCMAKE_INSTALL_PREFIX="/usr" -DCMAKE_EXE_LINKER_FLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" -DCMAKE_SKIP_RPATH=ON -DGMX_EXTERNAL_ZLIB=ON -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI=ON -DGMX_X11=OFF -DGMX_DEFAULT_SUFFIX=OFF -DCMAKE_EXE_LINKER_FLAGS="-L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" -DMPIEXEC="/usr/bin/mpiexec.openmpi" -DGMX_BUILD_MDRUN_ONLY=ON -DGMX_BINARY_SUFFIX="_mpi.openmpi" -DGMX_LIBS_SUFFIX="_mpi.openmpi") -- The C compiler identification is GNU 7.2.0 -- The CXX compiler identification is GNU 7.2.0 -- Check for working C compiler: /usr/bin/mpicc.openmpi -- Check for working C compiler: /usr/bin/mpicc.openmpi -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/mpicxx.openmpi -- Check for working CXX compiler: /usr/bin/mpicxx.openmpi -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- Performing Test CXXFLAG_STD_CXX0X -- Performing Test CXXFLAG_STD_CXX0X - Success -- Performing Test CXX11_SUPPORTED -- Performing Test CXX11_SUPPORTED - Success -- Performing Test CXX11_STDLIB_PRESENT -- Performing Test CXX11_STDLIB_PRESENT - Success -- Looking for NVIDIA GPUs present in the system -- Could not detect NVIDIA GPUs -- No compatible CUDA toolkit found (v5.0+), disabling native GPU acceleration -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file regex.h -- Looking for include file regex.h - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- MPI is not compatible with thread-MPI. Disabling thread-MPI. -- Checking for MPI_IN_PLACE -- Performing Test MPI_IN_PLACE_COMPILE_OK -- Performing Test MPI_IN_PLACE_COMPILE_OK - Success -- Checking for MPI_IN_PLACE - yes -- Defaulting to building static libraries -- hwloc version: 1.11.9 -- Found Hwloc: /usr/lib/aarch64-linux-gnu/libhwloc.so (found suitable version "1.11.9", minimum required is "1.5") -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so - found -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Setting build time - 2018-01-11 06:23:18 -- Setting build host - Linux aarch64 -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 0 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd -- Disabling RDTSCP support -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Looking for C++ include regex -- Looking for C++ include regex - found -- Checking for system XDR support -- Checking for system XDR support - present -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- pkg-config could not detect fftw3f, trying generic detection -- Looking for fftwf_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3f.so - found -- Looking for fftwf_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3f.so - not found -- Looking for fftwf_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3f.so -- Looking for fftwf_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3f.so - found -- Using external FFT library - FFTW3 -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- GROMACS only supports plugins in a build that uses shared libraries, which can be disabled for various reasons. BUILD_SHARED_LIBS=on and a toolchain that supports dynamic linking is required. (Hint: GMX_PREFER_STATIC_LIBS and GMX_BUILD_MDRUN_ONLY can influence the default BUILD_SHARED_LIBS, so if you need plugins, reconsider those choices.) -- Not using dynamic plugins (e.g VMD-supported file formats) -- Using manually set binary suffix: "_mpi.openmpi" -- Using manually set library suffix: "_mpi.openmpi" -- Performing Test HAS_NO_UNUSED_VARIABLE -- Performing Test HAS_NO_UNUSED_VARIABLE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for inttypes.h -- Looking for inttypes.h - found -- Configuring done -- Generating done -- Build files have been written to: /<>/build/openmpi (mkdir -p build/openmpi-dp; cd build/openmpi-dp; CC=/usr/bin/mpicc.openmpi CXX=/usr/bin/mpicxx.openmpi cmake \ /<> -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_RULE_MESSAGES=OFF -DCMAKE_INSTALL_PREFIX="/usr" -DCMAKE_EXE_LINKER_FLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" -DCMAKE_SKIP_RPATH=ON -DGMX_EXTERNAL_ZLIB=ON -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI=ON -DGMX_X11=OFF -DGMX_DEFAULT_SUFFIX=OFF -DCMAKE_EXE_LINKER_FLAGS="-L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" -DMPIEXEC="/usr/bin/mpiexec.openmpi" -DGMX_BUILD_MDRUN_ONLY=ON -DGMX_DOUBLE=ON -DGMX_BINARY_SUFFIX="_mpi_d.openmpi" -DGMX_LIBS_SUFFIX="_mpi_d.openmpi") -- The C compiler identification is GNU 7.2.0 -- The CXX compiler identification is GNU 7.2.0 -- Check for working C compiler: /usr/bin/mpicc.openmpi -- Check for working C compiler: /usr/bin/mpicc.openmpi -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/mpicxx.openmpi -- Check for working CXX compiler: /usr/bin/mpicxx.openmpi -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- Performing Test CXXFLAG_STD_CXX0X -- Performing Test CXXFLAG_STD_CXX0X - Success -- Performing Test CXX11_SUPPORTED -- Performing Test CXX11_SUPPORTED - Success -- Performing Test CXX11_STDLIB_PRESENT -- Performing Test CXX11_STDLIB_PRESENT - Success CMake Warning at cmake/gmxManageGPU.cmake:57 (message): GPU acceleration is not available in double precision, disabled! Call Stack (most recent call first): CMakeLists.txt:225 (include) -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file regex.h -- Looking for include file regex.h - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- MPI is not compatible with thread-MPI. Disabling thread-MPI. -- Checking for MPI_IN_PLACE -- Performing Test MPI_IN_PLACE_COMPILE_OK -- Performing Test MPI_IN_PLACE_COMPILE_OK - Success -- Checking for MPI_IN_PLACE - yes -- Defaulting to building static libraries -- hwloc version: 1.11.9 -- Found Hwloc: /usr/lib/aarch64-linux-gnu/libhwloc.so (found suitable version "1.11.9", minimum required is "1.5") -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so -- Looking for zlibVersion in /usr/lib/aarch64-linux-gnu/libz.so - found -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Setting build time - 2018-01-11 06:23:18 -- Setting build host - Linux aarch64 -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 0 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd -- Disabling RDTSCP support -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Looking for C++ include regex -- Looking for C++ include regex - found -- Checking for system XDR support -- Checking for system XDR support - present -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- pkg-config could not detect fftw3, trying generic detection -- Looking for fftw_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_plan_r2r_1d in /usr/lib/aarch64-linux-gnu/libfftw3.so - found -- Looking for fftw_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_sse in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_sse2 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx2 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx2_128 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx512 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx_128_fma in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_avx_512 in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_kcvi in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_neon in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_vsx in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_vsx in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_simd_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Looking for fftw_have_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so -- Looking for fftw_have_altivec in /usr/lib/aarch64-linux-gnu/libfftw3.so - not found -- Using external FFT library - FFTW3 -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- GROMACS only supports plugins in a build that uses shared libraries, which can be disabled for various reasons. BUILD_SHARED_LIBS=on and a toolchain that supports dynamic linking is required. (Hint: GMX_PREFER_STATIC_LIBS and GMX_BUILD_MDRUN_ONLY can influence the default BUILD_SHARED_LIBS, so if you need plugins, reconsider those choices.) -- Not using dynamic plugins (e.g VMD-supported file formats) -- Using manually set binary suffix: "_mpi_d.openmpi" -- Using manually set library suffix: "_mpi_d.openmpi" -- Performing Test HAS_NO_UNUSED_VARIABLE -- Performing Test HAS_NO_UNUSED_VARIABLE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for inttypes.h -- Looking for inttypes.h - found -- Configuring done -- Generating done -- Build files have been written to: /<>/build/openmpi-dp touch configure-stamp dh_testdir /usr/bin/make -j4 -C build/basic make[1]: Entering directory '/<>/build/basic' /usr/bin/cmake -H/<> -B/<>/build/basic --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/basic/CMakeFiles /<>/build/basic/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/basic' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/depend make[3]: Entering directory '/<>/build/basic' make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic /<>/build/basic/src/programs /<>/build/basic/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic /<>/build/basic/src/gromacs /<>/build/basic/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic /<>/build/basic/src/programs/mdrun/tests /<>/build/basic/src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic /<>/build/basic/src/programs /<>/build/basic/src/programs/CMakeFiles/view_objlib.dir/DependInfo.cmake --color= Scanning dependencies of target tng_io_obj make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwlzh.c.o -c /<>/src/external/tng_io/src/compression/bwlzh.c Scanning dependencies of target mdrun_test_objlib make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build Scanning dependencies of target view_objlib make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/build make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_test_objlib.dir/energyreader.cpp.o -c /<>/src/programs/mdrun/tests/energyreader.cpp make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/3dview.cpp.o -c /<>/src/programs/view/3dview.cpp Scanning dependencies of target mdrun_objlib make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o -c /<>/src/programs/mdrun/md.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/buttons.cpp.o -c /<>/src/programs/view/buttons.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/dialogs.cpp.o -c /<>/src/programs/view/dialogs.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwt.c.o -c /<>/src/external/tng_io/src/compression/bwt.c cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/fgrid.cpp.o -c /<>/src/programs/view/fgrid.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/coder.c.o -c /<>/src/external/tng_io/src/compression/coder.c cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/filter.cpp.o -c /<>/src/programs/view/filter.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/dict.c.o -c /<>/src/external/tng_io/src/compression/dict.c cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/logo.cpp.o -c /<>/src/programs/view/logo.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/fixpoint.c.o -c /<>/src/external/tng_io/src/compression/fixpoint.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffman.c.o -c /<>/src/external/tng_io/src/compression/huffman.c cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/manager.cpp.o -c /<>/src/programs/view/manager.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffmem.c.o -c /<>/src/external/tng_io/src/compression/huffmem.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/lz77.c.o -c /<>/src/external/tng_io/src/compression/lz77.c cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/molps.cpp.o -c /<>/src/programs/view/molps.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/merge_sort.c.o -c /<>/src/external/tng_io/src/compression/merge_sort.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/mtf.c.o -c /<>/src/external/tng_io/src/compression/mtf.c cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/nleg.cpp.o -c /<>/src/programs/view/nleg.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/rle.c.o -c /<>/src/external/tng_io/src/compression/rle.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/tng_compress.c.o -c /<>/src/external/tng_io/src/compression/tng_compress.c cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_test_objlib.dir/mdruncomparisonfixture.cpp.o -c /<>/src/programs/mdrun/tests/mdruncomparisonfixture.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/nmol.cpp.o -c /<>/src/programs/view/nmol.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -c /<>/src/programs/mdrun/mdrun.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/popup.cpp.o -c /<>/src/programs/view/popup.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/pulldown.cpp.o -c /<>/src/programs/view/pulldown.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/view.cpp.o -c /<>/src/programs/view/view.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o -c /<>/src/programs/mdrun/membed.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/x11.cpp.o -c /<>/src/programs/view/x11.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xdlg.cpp.o -c /<>/src/programs/view/xdlg.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/vals16.c.o -c /<>/src/external/tng_io/src/compression/vals16.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/warnmalloc.c.o -c /<>/src/external/tng_io/src/compression/warnmalloc.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/widemuldiv.c.o -c /<>/src/external/tng_io/src/compression/widemuldiv.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc2.c.o -c /<>/src/external/tng_io/src/compression/xtc2.c cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xdlghi.cpp.o -c /<>/src/programs/view/xdlghi.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_test_objlib.dir/moduletest.cpp.o -c /<>/src/programs/mdrun/tests/moduletest.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xdlgitem.cpp.o -c /<>/src/programs/view/xdlgitem.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xmb.cpp.o -c /<>/src/programs/view/xmb.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xutil.cpp.o -c /<>/src/programs/view/xutil.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc3.c.o -c /<>/src/external/tng_io/src/compression/xtc3.c make[3]: Leaving directory '/<>/build/basic' [ 1%] Built target view_objlib cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/tng_io.c.o -c /<>/src/external/tng_io/src/lib/tng_io.c cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_test_objlib.dir/terminationhelper.cpp.o -c /<>/src/programs/mdrun/tests/terminationhelper.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o -c /<>/src/programs/mdrun/repl_ex.cpp make[3]: Leaving directory '/<>/build/basic' [ 1%] Built target mdrun_test_objlib cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -c /<>/src/programs/mdrun/runner.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/md5.c.o -c /<>/src/external/tng_io/src/lib/md5.c make[3]: Leaving directory '/<>/build/basic' [ 1%] Built target mdrun_objlib make[3]: Leaving directory '/<>/build/basic' [ 2%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/<>/build/basic/VersionInfo.cmake -D VERSION_CMAKEIN=/<>/src/gromacs/utility/baseversion-gen.c.cmakein -D VERSION_OUT=utility/baseversion-gen.c -P /<>/cmake/gmxConfigureVersionInfo.cmake cd /<>/build/basic/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.c cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic /<>/build/basic/src/gromacs /<>/build/basic/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= Scanning dependencies of target libgromacs make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/bonded.cpp.o -c /<>/src/gromacs/listed-forces/bonded.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/disre.cpp.o -c /<>/src/gromacs/listed-forces/disre.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-forces.cpp.o -c /<>/src/gromacs/listed-forces/listed-forces.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-internal.cpp.o -c /<>/src/gromacs/listed-forces/listed-internal.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/manage-threading.cpp.o -c /<>/src/gromacs/listed-forces/manage-threading.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/orires.cpp.o -c /<>/src/gromacs/listed-forces/orires.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/pairs.cpp.o -c /<>/src/gromacs/listed-forces/pairs.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/position-restraints.cpp.o -c /<>/src/gromacs/listed-forces/position-restraints.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/restcbt.cpp.o -c /<>/src/gromacs/listed-forces/restcbt.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpcontext.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpmodule.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpwriter.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineinit.cpp.o -c /<>/src/gromacs/commandline/cmdlineinit.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinemodule.cpp.o -c /<>/src/gromacs/commandline/cmdlinemodule.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/cmdlinemodulemanager.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineoptionsmodule.cpp.o -c /<>/src/gromacs/commandline/cmdlineoptionsmodule.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineparser.cpp.o -c /<>/src/gromacs/commandline/cmdlineparser.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineprogramcontext.cpp.o -c /<>/src/gromacs/commandline/cmdlineprogramcontext.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/filenm.cpp.o -c /<>/src/gromacs/commandline/filenm.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/pargs.cpp.o -c /<>/src/gromacs/commandline/pargs.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/shellcompletions.cpp.o -c /<>/src/gromacs/commandline/shellcompletions.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/viewit.cpp.o -c /<>/src/gromacs/commandline/viewit.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o -c /<>/src/gromacs/domdec/dlbtiming.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o -c /<>/src/gromacs/domdec/domdec.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_box.cpp.o -c 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-I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o -c /<>/src/gromacs/domdec/domdec_specatomcomm.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/ewald/calculate-spline-moduli.cpp.o -c /<>/src/gromacs/ewald/calculate-spline-moduli.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/ewald/ewald-utils.cpp.o -c /<>/src/gromacs/ewald/ewald-utils.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H 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-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-gpu-internal.cpp.o -c /<>/src/gromacs/ewald/pme-gpu-internal.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-gpu.cpp.o -c /<>/src/gromacs/ewald/pme-gpu.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H 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-O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o -c /<>/src/gromacs/tables/splineutil.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o -c /<>/src/gromacs/timing/cyclecounter.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H 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/<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/topology/mtop_util.cpp.o -c /<>/src/gromacs/topology/mtop_util.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/fileredirector.cpp.o -c /<>/src/gromacs/utility/fileredirector.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/filestream.cpp.o -c /<>/src/gromacs/utility/filestream.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/futil.cpp.o -c /<>/src/gromacs/utility/futil.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o -c /<>/src/gromacs/utility/keyvaluetree.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/keyvaluetreeserializer.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H 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-I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/messagestringcollector.cpp.o -c /<>/src/gromacs/utility/messagestringcollector.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/niceheader.cpp.o -c /<>/src/gromacs/utility/niceheader.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ 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-I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/qsort_threadsafe.cpp.o -c /<>/src/gromacs/utility/qsort_threadsafe.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/smalloc.cpp.o -c /<>/src/gromacs/utility/smalloc.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 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-DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/textreader.cpp.o -c /<>/src/gromacs/utility/textreader.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast 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-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/variant.cpp.o -c /<>/src/gromacs/utility/variant.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/checkpoint.cpp.o -c /<>/src/gromacs/fileio/checkpoint.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/filetypes.cpp.o -c /<>/src/gromacs/fileio/filetypes.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o -c /<>/src/gromacs/fileio/g96io.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o -c /<>/src/gromacs/fileio/gmx_internal_xdr.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio-xdr.cpp.o 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -c /<>/src/gromacs/fileio/matio.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/md5.cpp.o -c /<>/src/gromacs/fileio/md5.cpp cd 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-I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/readinp.cpp.o -c /<>/src/gromacs/fileio/readinp.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/timecontrol.cpp.o -c /<>/src/gromacs/fileio/timecontrol.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ 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/<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/imd/imdsocket.cpp.o -c /<>/src/gromacs/imd/imdsocket.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/anadih.cpp.o 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/dlist.cpp.o -c /<>/src/gromacs/gmxana/dlist.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/eigio.cpp.o -c /<>/src/gromacs/gmxana/eigio.cpp cd 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-I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_analyze.cpp.o -c /<>/src/gromacs/gmxana/gmx_analyze.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_angle.cpp.o -c /<>/src/gromacs/gmxana/gmx_angle.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ 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-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_tune_pme.cpp.o -c /<>/src/gromacs/gmxana/gmx_tune_pme.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_vanhove.cpp.o -c /<>/src/gromacs/gmxana/gmx_vanhove.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_velacc.cpp.o -c /<>/src/gromacs/gmxana/gmx_velacc.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_xpm2ps.cpp.o -c /<>/src/gromacs/gmxana/gmx_xpm2ps.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/hxprops.cpp.o -c /<>/src/gromacs/gmxana/hxprops.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/nrama.cpp.o -c /<>/src/gromacs/gmxana/nrama.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/nsfactor.cpp.o 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/pp2shift.cpp.o -c /<>/src/gromacs/gmxana/pp2shift.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/princ.cpp.o -c /<>/src/gromacs/gmxana/princ.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/sfactor.cpp.o -c /<>/src/gromacs/gmxana/sfactor.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/add_par.cpp.o -c /<>/src/gromacs/gmxpreprocess/add_par.cpp 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.cpp.o -c /<>/src/gromacs/gmxpreprocess/gen_ad.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gen_maxwell_velocities.cpp.o -c /<>/src/gromacs/gmxpreprocess/gen_maxwell_velocities.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gen_vsite.cpp.o -c /<>/src/gromacs/gmxpreprocess/gen_vsite.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/genconf.cpp.o -c /<>/src/gromacs/gmxpreprocess/genconf.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/genhydro.cpp.o -c /<>/src/gromacs/gmxpreprocess/genhydro.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS 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-I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/readpull.cpp.o -c /<>/src/gromacs/gmxpreprocess/readpull.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/readrot.cpp.o -c /<>/src/gromacs/gmxpreprocess/readrot.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/correlationfunctions/gmx_lmcurve.cpp.o -c /<>/src/gromacs/correlationfunctions/gmx_lmcurve.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/correlationfunctions/integrate.cpp.o -c /<>/src/gromacs/correlationfunctions/integrate.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H 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-I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/analysisdata/abstractdata.cpp.o -c /<>/src/gromacs/analysisdata/abstractdata.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/analysisdata/analysisdata.cpp.o -c /<>/src/gromacs/analysisdata/analysisdata.cpp cd 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/analysisdata/datamodulemanager.cpp.o -c /<>/src/gromacs/analysisdata/datamodulemanager.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/analysisdata/dataproxy.cpp.o -c 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/poscalc.cpp.o -c /<>/src/gromacs/selection/poscalc.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/position.cpp.o -c /<>/src/gromacs/selection/position.cpp 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-I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selectionoptionmanager.cpp.o -c /<>/src/gromacs/selection/selectionoptionmanager.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selelem.cpp.o -c /<>/src/gromacs/selection/selelem.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ 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-I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_compare.cpp.o -c /<>/src/gromacs/selection/sm_compare.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_distance.cpp.o -c /<>/src/gromacs/selection/sm_distance.cpp cd /<>/build/basic/src/gromacs && 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/tools/dump.cpp.o -c /<>/src/gromacs/tools/dump.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/chargegroup.cpp.o -c /<>/src/gromacs/gmxlib/chargegroup.cpp cd 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-Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops 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-Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 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/<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC 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-Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 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-I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops 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-Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 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-DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security 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/usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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/<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src 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/<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops 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-Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 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-DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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-DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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/<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. 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/<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src 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-I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC 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/<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops 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-Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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-DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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/<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c.o -c 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/<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops 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-Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 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-DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops 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/<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops 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-Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops 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/<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC 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-I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/broadcaststructs.cpp.o -c /<>/src/gromacs/mdlib/broadcaststructs.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/calc_verletbuf.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/compute_io.cpp.o -c /<>/src/gromacs/mdlib/compute_io.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -c /<>/src/gromacs/mdlib/constr.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/coupling.cpp.o -c /<>/src/gromacs/mdlib/coupling.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/csettle.cpp.o -c 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-I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/update.cpp.o -c /<>/src/gromacs/mdlib/update.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/vcm.cpp.o -c /<>/src/gromacs/mdlib/vcm.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 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/<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/options/optionsection.cpp.o -c /<>/src/gromacs/options/optionsection.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/options/treesupport.cpp.o -c /<>/src/gromacs/options/treesupport.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o -c /<>/src/gromacs/taskassignment/decidegpuusage.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H 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-I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o -c /<>/src/gromacs/taskassignment/taskassignment.cpp cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o -c 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/usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/collective.c.o -c /<>/src/external/thread_mpi/src/collective.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce.c.o -c /<>/src/external/thread_mpi/src/reduce.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/event.c.o -c /<>/src/external/thread_mpi/src/event.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce_fast.c.o -c /<>/src/external/thread_mpi/src/reduce_fast.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/gather.c.o -c /<>/src/external/thread_mpi/src/gather.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scatter.c.o -c /<>/src/external/thread_mpi/src/scatter.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/group.c.o -c /<>/src/external/thread_mpi/src/group.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/tmpi_init.c.o -c /<>/src/external/thread_mpi/src/tmpi_init.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/topology.c.o -c /<>/src/external/thread_mpi/src/topology.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/list.c.o -c /<>/src/external/thread_mpi/src/list.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/type.c.o -c /<>/src/external/thread_mpi/src/type.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scan.c.o -c /<>/src/external/thread_mpi/src/scan.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/numa_malloc.c.o -c /<>/src/external/thread_mpi/src/numa_malloc.c cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/once.c.o -c /<>/src/external/thread_mpi/src/once.c cd /<>/build/basic/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/lmfit/lmmin.cpp.o -c /<>/src/external/lmfit/lmmin.cpp cd /<>/build/basic/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/baseversion-gen.c.o -c /<>/build/basic/src/gromacs/utility/baseversion-gen.c cd /<>/build/basic/src/gromacs && /usr/bin/cmake -E cmake_link_script CMakeFiles/libgromacs.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libgromacs.so.3 -o ../../lib/libgromacs.so.3.0.0 @CMakeFiles/libgromacs.dir/objects1.rsp /usr/lib/aarch64-linux-gnu/libhwloc.so -ldl -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so -lpthread -fopenmp -lm /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/liblapack.so -lpthread -lm cd /<>/build/basic/src/gromacs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libgromacs.so.3.0.0 ../../lib/libgromacs.so.3 ../../lib/libgromacs.so make[3]: Leaving directory '/<>/build/basic' [ 98%] Built target libgromacs /usr/bin/make -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/depend /usr/bin/make -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/depend make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic /<>/build/basic/src/programs /<>/build/basic/src/programs/CMakeFiles/gmx.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/share/template /<>/build/basic /<>/build/basic/share/template /<>/build/basic/share/template/CMakeFiles/template.dir/DependInfo.cmake --color= Scanning dependencies of target template Scanning dependencies of target gmx make[3]: Leaving directory '/<>/build/basic' make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/gmx.dir/gmx.cpp.o -c /<>/src/programs/gmx.cpp cd /<>/build/basic/src/programs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/gmx.dir/legacymodules.cpp.o -c /<>/src/programs/legacymodules.cpp /usr/bin/make -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/build make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic/share/template && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/template.dir/template.cpp.o -c /<>/share/template/template.cpp cd /<>/build/basic/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gmx.dir/gmx.cpp.o CMakeFiles/gmx.dir/legacymodules.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o 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/<>/build/basic-dp/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/depend make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic-dp /<>/build/basic-dp/src/programs /<>/build/basic-dp/src/programs/CMakeFiles/view_objlib.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic-dp /<>/build/basic-dp/src/gromacs /<>/build/basic-dp/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic-dp' make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic-dp /<>/build/basic-dp/src/programs /<>/build/basic-dp/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic-dp /<>/build/basic-dp/src/programs/mdrun/tests /<>/build/basic-dp/src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/DependInfo.cmake --color= Scanning dependencies of target tng_io_obj make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build Scanning dependencies of target view_objlib make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/build make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/3dview.cpp.o -c /<>/src/programs/view/3dview.cpp make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwlzh.c.o -c /<>/src/external/tng_io/src/compression/bwlzh.c Scanning dependencies of target mdrun_test_objlib Scanning dependencies of target mdrun_objlib make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o -c /<>/src/programs/mdrun/md.cpp make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_test_objlib.dir/energyreader.cpp.o -c /<>/src/programs/mdrun/tests/energyreader.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/buttons.cpp.o -c /<>/src/programs/view/buttons.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/dialogs.cpp.o -c /<>/src/programs/view/dialogs.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwt.c.o -c /<>/src/external/tng_io/src/compression/bwt.c cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/fgrid.cpp.o -c /<>/src/programs/view/fgrid.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/coder.c.o -c /<>/src/external/tng_io/src/compression/coder.c cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/filter.cpp.o -c /<>/src/programs/view/filter.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/dict.c.o -c /<>/src/external/tng_io/src/compression/dict.c cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/logo.cpp.o -c /<>/src/programs/view/logo.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/fixpoint.c.o -c /<>/src/external/tng_io/src/compression/fixpoint.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffman.c.o -c /<>/src/external/tng_io/src/compression/huffman.c cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/manager.cpp.o -c /<>/src/programs/view/manager.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffmem.c.o -c /<>/src/external/tng_io/src/compression/huffmem.c cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/molps.cpp.o -c /<>/src/programs/view/molps.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/lz77.c.o -c /<>/src/external/tng_io/src/compression/lz77.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/merge_sort.c.o -c /<>/src/external/tng_io/src/compression/merge_sort.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/mtf.c.o -c /<>/src/external/tng_io/src/compression/mtf.c cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/nleg.cpp.o -c /<>/src/programs/view/nleg.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/nmol.cpp.o -c /<>/src/programs/view/nmol.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/rle.c.o -c /<>/src/external/tng_io/src/compression/rle.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/tng_compress.c.o -c /<>/src/external/tng_io/src/compression/tng_compress.c cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_test_objlib.dir/mdruncomparisonfixture.cpp.o -c /<>/src/programs/mdrun/tests/mdruncomparisonfixture.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/popup.cpp.o -c /<>/src/programs/view/popup.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -c /<>/src/programs/mdrun/mdrun.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/pulldown.cpp.o -c /<>/src/programs/view/pulldown.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/view.cpp.o -c /<>/src/programs/view/view.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/x11.cpp.o -c /<>/src/programs/view/x11.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o -c /<>/src/programs/mdrun/membed.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xdlg.cpp.o -c /<>/src/programs/view/xdlg.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/vals16.c.o -c /<>/src/external/tng_io/src/compression/vals16.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/warnmalloc.c.o -c /<>/src/external/tng_io/src/compression/warnmalloc.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/widemuldiv.c.o -c /<>/src/external/tng_io/src/compression/widemuldiv.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc2.c.o -c /<>/src/external/tng_io/src/compression/xtc2.c cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xdlghi.cpp.o -c /<>/src/programs/view/xdlghi.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_test_objlib.dir/moduletest.cpp.o -c /<>/src/programs/mdrun/tests/moduletest.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xdlgitem.cpp.o -c /<>/src/programs/view/xdlgitem.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xmb.cpp.o -c /<>/src/programs/view/xmb.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/view_objlib.dir/view/xutil.cpp.o -c /<>/src/programs/view/xutil.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc3.c.o -c /<>/src/external/tng_io/src/compression/xtc3.c make[3]: Leaving directory '/<>/build/basic-dp' [ 1%] Built target view_objlib cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/tng_io.c.o -c /<>/src/external/tng_io/src/lib/tng_io.c cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_test_objlib.dir/terminationhelper.cpp.o -c /<>/src/programs/mdrun/tests/terminationhelper.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o -c /<>/src/programs/mdrun/repl_ex.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/md5.c.o -c /<>/src/external/tng_io/src/lib/md5.c cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -c /<>/src/programs/mdrun/runner.cpp make[3]: Leaving directory '/<>/build/basic-dp' [ 1%] Built target mdrun_test_objlib make[3]: Leaving directory '/<>/build/basic-dp' [ 1%] Built target mdrun_objlib make[3]: Leaving directory '/<>/build/basic-dp' [ 2%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/<>/build/basic-dp/VersionInfo.cmake -D VERSION_CMAKEIN=/<>/src/gromacs/utility/baseversion-gen.c.cmakein -D VERSION_OUT=utility/baseversion-gen.c -P /<>/cmake/gmxConfigureVersionInfo.cmake cd /<>/build/basic-dp/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.c cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic-dp /<>/build/basic-dp/src/gromacs /<>/build/basic-dp/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= Scanning dependencies of target libgromacs make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/bonded.cpp.o -c /<>/src/gromacs/listed-forces/bonded.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/disre.cpp.o -c /<>/src/gromacs/listed-forces/disre.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-forces.cpp.o -c /<>/src/gromacs/listed-forces/listed-forces.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-internal.cpp.o -c /<>/src/gromacs/listed-forces/listed-internal.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/manage-threading.cpp.o -c /<>/src/gromacs/listed-forces/manage-threading.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/orires.cpp.o -c /<>/src/gromacs/listed-forces/orires.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/pairs.cpp.o -c /<>/src/gromacs/listed-forces/pairs.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/position-restraints.cpp.o -c /<>/src/gromacs/listed-forces/position-restraints.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/restcbt.cpp.o -c /<>/src/gromacs/listed-forces/restcbt.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpwriter.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineinit.cpp.o 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/cmdlinemodulemanager.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineoptionsmodule.cpp.o -c /<>/src/gromacs/commandline/cmdlineoptionsmodule.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/pargs.cpp.o -c /<>/src/gromacs/commandline/pargs.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/commandline/shellcompletions.cpp.o -c 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o -c /<>/src/gromacs/domdec/dlbtiming.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o -c /<>/src/gromacs/domdec/domdec.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_box.cpp.o -c /<>/src/gromacs/domdec/domdec_box.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o -c /<>/src/gromacs/domdec/domdec_setup.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o -c /<>/src/gromacs/domdec/domdec_specatomcomm.cpp cd /<>/build/basic-dp/src/gromacs && 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/ewald/ewald-utils.cpp.o -c /<>/src/gromacs/ewald/ewald-utils.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/ewald/ewald.cpp.o -c /<>/src/gromacs/ewald/ewald.cpp 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/<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-redistribute.cpp.o -c /<>/src/gromacs/ewald/pme-redistribute.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/math/invertmatrix.cpp.o -c /<>/src/gromacs/math/invertmatrix.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/math/units.cpp.o -c /<>/src/gromacs/math/units.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdtypes/state.cpp.o -c /<>/src/gromacs/mdtypes/state.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/onlinehelp/helpformat.cpp.o -c 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-I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/topology/index.cpp.o -c /<>/src/gromacs/topology/index.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/topology/invblock.cpp.o -c /<>/src/gromacs/topology/invblock.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/topology/topology.cpp.o -c /<>/src/gromacs/topology/topology.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/topology/topsort.cpp.o -c /<>/src/gromacs/topology/topsort.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/alignedallocator.cpp.o -c /<>/src/gromacs/utility/alignedallocator.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/binaryinformation.cpp.o -c /<>/src/gromacs/utility/binaryinformation.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/compare.cpp.o -c 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-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/cstringutil.cpp.o -c /<>/src/gromacs/utility/cstringutil.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/datafilefinder.cpp.o -c /<>/src/gromacs/utility/datafilefinder.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/directoryenumerator.cpp.o -c /<>/src/gromacs/utility/directoryenumerator.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/exceptions.cpp.o -c /<>/src/gromacs/utility/exceptions.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/fatalerror.cpp.o -c /<>/src/gromacs/utility/fatalerror.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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-I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/gmxassert.cpp.o -c /<>/src/gromacs/utility/gmxassert.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/gmxomp.cpp.o -c /<>/src/gromacs/utility/gmxomp.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/inmemoryserializer.cpp.o -c /<>/src/gromacs/utility/inmemoryserializer.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/int64_to_int.cpp.o -c /<>/src/gromacs/utility/int64_to_int.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o -c /<>/src/gromacs/utility/keyvaluetree.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/keyvaluetreeserializer.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetreetransform.cpp.o -c /<>/src/gromacs/utility/keyvaluetreetransform.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/logger.cpp.o -c /<>/src/gromacs/utility/logger.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/niceheader.cpp.o -c /<>/src/gromacs/utility/niceheader.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/path.cpp.o -c /<>/src/gromacs/utility/path.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 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-I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/smalloc.cpp.o -c /<>/src/gromacs/utility/smalloc.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/strconvert.cpp.o -c /<>/src/gromacs/utility/strconvert.cpp cd 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o -c /<>/src/gromacs/utility/sysinfo.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/textreader.cpp.o -c 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/espio.cpp.o -c /<>/src/gromacs/fileio/espio.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/filetypes.cpp.o -c /<>/src/gromacs/fileio/filetypes.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o -c /<>/src/gromacs/fileio/g96io.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o -c 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -c /<>/src/gromacs/fileio/gmxfio.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -c /<>/src/gromacs/fileio/groio.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -c /<>/src/gromacs/fileio/libxdrf.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/mtxio.cpp.o -c /<>/src/gromacs/fileio/mtxio.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/oenv.cpp.o -c /<>/src/gromacs/fileio/oenv.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/pdbio.cpp.o -c /<>/src/gromacs/fileio/pdbio.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/readinp.cpp.o -c /<>/src/gromacs/fileio/readinp.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/timecontrol.cpp.o -c /<>/src/gromacs/fileio/timecontrol.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/tngio.cpp.o -c /<>/src/gromacs/fileio/tngio.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/tpxio.cpp.o -c /<>/src/gromacs/fileio/tpxio.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/trrio.cpp.o -c /<>/src/gromacs/fileio/trrio.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/fileio/trxio.cpp.o -c /<>/src/gromacs/fileio/trxio.cpp 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/essentialdynamics/edsam.cpp.o -c /<>/src/gromacs/essentialdynamics/edsam.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/pulling/pull.cpp.o -c 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/awh/bias.cpp.o -c /<>/src/gromacs/awh/bias.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/awh/biasparams.cpp.o -c /<>/src/gromacs/awh/biasparams.cpp cd 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/awh/coordstate.cpp.o -c /<>/src/gromacs/awh/coordstate.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/awh/correlationgrid.cpp.o -c 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/<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/awh/histogramsize.cpp.o -c /<>/src/gromacs/awh/histogramsize.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_enemat.cpp.o -c /<>/src/gromacs/gmxana/gmx_enemat.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_energy.cpp.o -c /<>/src/gromacs/gmxana/gmx_energy.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_filter.cpp.o -c /<>/src/gromacs/gmxana/gmx_filter.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_gyrate.cpp.o -c /<>/src/gromacs/gmxana/gmx_gyrate.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_h2order.cpp.o -c 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-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_helix.cpp.o -c /<>/src/gromacs/gmxana/gmx_helix.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_helixorient.cpp.o -c /<>/src/gromacs/gmxana/gmx_helixorient.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_hydorder.cpp.o -c /<>/src/gromacs/gmxana/gmx_hydorder.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rama.cpp.o -c /<>/src/gromacs/gmxana/gmx_rama.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rms.cpp.o -c /<>/src/gromacs/gmxana/gmx_rms.cpp cd /<>/build/basic-dp/src/gromacs && 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_rotmat.cpp.o -c /<>/src/gromacs/gmxana/gmx_rotmat.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_saltbr.cpp.o -c /<>/src/gromacs/gmxana/gmx_saltbr.cpp cd /<>/build/basic-dp/src/gromacs 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_sigeps.cpp.o -c /<>/src/gromacs/gmxana/gmx_sigeps.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_sorient.cpp.o -c /<>/src/gromacs/gmxana/gmx_sorient.cpp cd /<>/build/basic-dp/src/gromacs 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-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_wheel.cpp.o -c /<>/src/gromacs/gmxana/gmx_wheel.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/gmx_xpm2ps.cpp.o -c /<>/src/gromacs/gmxana/gmx_xpm2ps.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/hxprops.cpp.o -c /<>/src/gromacs/gmxana/hxprops.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/nrama.cpp.o -c /<>/src/gromacs/gmxana/nrama.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/nsfactor.cpp.o -c /<>/src/gromacs/gmxana/nsfactor.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/powerspect.cpp.o -c /<>/src/gromacs/gmxana/powerspect.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/pp2shift.cpp.o -c /<>/src/gromacs/gmxana/pp2shift.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/princ.cpp.o -c /<>/src/gromacs/gmxana/princ.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxana/sfactor.cpp.o -c /<>/src/gromacs/gmxana/sfactor.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/add_par.cpp.o -c /<>/src/gromacs/gmxpreprocess/add_par.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/calch.cpp.o -c /<>/src/gromacs/gmxpreprocess/calch.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/convparm.cpp.o -c /<>/src/gromacs/gmxpreprocess/convparm.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gen_vsite.cpp.o -c /<>/src/gromacs/gmxpreprocess/gen_vsite.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/genconf.cpp.o -c /<>/src/gromacs/gmxpreprocess/genconf.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/genhydro.cpp.o -c /<>/src/gromacs/gmxpreprocess/genhydro.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security 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-I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/gpp_bond_atomtype.cpp.o -c /<>/src/gromacs/gmxpreprocess/gpp_bond_atomtype.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/pgutil.cpp.o -c /<>/src/gromacs/gmxpreprocess/pgutil.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/read-conformation.cpp.o -c /<>/src/gromacs/gmxpreprocess/read-conformation.cpp cd /<>/build/basic-dp/src/gromacs 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/resall.cpp.o -c /<>/src/gromacs/gmxpreprocess/resall.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxpreprocess/solvate.cpp.o -c 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-I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/position.cpp.o -c /<>/src/gromacs/selection/position.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -Wno-unused-parameter -Wno-unused-function -o CMakeFiles/libgromacs.dir/selection/scanner.cpp.o -c /<>/src/gromacs/selection/scanner.cpp cd 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/<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selectionoption.cpp.o -c /<>/src/gromacs/selection/selectionoption.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selelem.cpp.o -c /<>/src/gromacs/selection/selelem.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/selhelp.cpp.o -c /<>/src/gromacs/selection/selhelp.cpp cd /<>/build/basic-dp/src/gromacs 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_distance.cpp.o -c /<>/src/gromacs/selection/sm_distance.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/selection/sm_insolidangle.cpp.o -c 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/<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nrnb.cpp.o -c /<>/src/gromacs/gmxlib/nrnb.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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/<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include 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-isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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/<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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/<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 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/<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include 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/<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security 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/<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 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/<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include 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-isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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/<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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/<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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/<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops 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-DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong 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-DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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/<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o 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-isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 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-DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong 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/<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS 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-DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong 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/<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src 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/<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG 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&& /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC 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-Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG 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-I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/broadcaststructs.cpp.o -c /<>/src/gromacs/mdlib/broadcaststructs.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o -c 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/compute_io.cpp.o -c /<>/src/gromacs/mdlib/compute_io.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -c 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/expanded.cpp.o -c /<>/src/gromacs/mdlib/expanded.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/force.cpp.o -c /<>/src/gromacs/mdlib/force.cpp cd 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o -c /<>/src/gromacs/mdlib/gmx_omp_nthreads.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o -c /<>/src/gromacs/mdlib/groupcoord.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/main.cpp.o -c /<>/src/gromacs/mdlib/main.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -c /<>/src/gromacs/mdlib/md_support.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o -c /<>/src/gromacs/mdlib/mdatoms.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdebin.cpp.o -c /<>/src/gromacs/mdlib/mdebin.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o -c /<>/src/gromacs/mdlib/mdebin_bar.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdoutf.cpp.o -c /<>/src/gromacs/mdlib/mdoutf.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdsetup.cpp.o -c /<>/src/gromacs/mdlib/mdsetup.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/minimize.cpp.o -c /<>/src/gromacs/mdlib/minimize.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_atomdata.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_atomdata.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_grid.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_grid.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_search.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_search.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_tuning.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_tuning.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/ns.cpp.o -c /<>/src/gromacs/mdlib/ns.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nsgrid.cpp.o -c /<>/src/gromacs/mdlib/nsgrid.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o -c /<>/src/gromacs/mdlib/perf_est.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_gamess.cpp.o -c /<>/src/gromacs/mdlib/qm_gamess.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_gaussian.cpp.o -c /<>/src/gromacs/mdlib/qm_gaussian.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_mopac.cpp.o -c /<>/src/gromacs/mdlib/qm_mopac.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_orca.cpp.o -c /<>/src/gromacs/mdlib/qm_orca.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qmmm.cpp.o -c 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-I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/vcm.cpp.o -c /<>/src/gromacs/mdlib/vcm.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/vsite.cpp.o -c 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdrunutility/handlerestart.cpp.o -c /<>/src/gromacs/mdrunutility/handlerestart.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/mdrunutility/mdmodules.cpp.o -c 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/options/timeunitmanager.cpp.o -c /<>/src/gromacs/options/timeunitmanager.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/options/treesupport.cpp.o -c 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CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/system_error.cpp.o -c /<>/src/external/thread_mpi/src/system_error.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/alltoall.c.o -c /<>/src/external/thread_mpi/src/alltoall.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_protocol.c.o -c /<>/src/external/thread_mpi/src/p2p_protocol.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/barrier.c.o -c /<>/src/external/thread_mpi/src/barrier.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_send_recv.c.o -c /<>/src/external/thread_mpi/src/p2p_send_recv.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/bcast.c.o -c /<>/src/external/thread_mpi/src/bcast.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/p2p_wait.c.o -c /<>/src/external/thread_mpi/src/p2p_wait.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/collective.c.o -c /<>/src/external/thread_mpi/src/collective.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/profile.c.o -c /<>/src/external/thread_mpi/src/profile.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/comm.c.o -c /<>/src/external/thread_mpi/src/comm.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce.c.o -c /<>/src/external/thread_mpi/src/reduce.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/event.c.o -c /<>/src/external/thread_mpi/src/event.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/reduce_fast.c.o -c /<>/src/external/thread_mpi/src/reduce_fast.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/gather.c.o -c /<>/src/external/thread_mpi/src/gather.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scatter.c.o -c /<>/src/external/thread_mpi/src/scatter.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/group.c.o -c /<>/src/external/thread_mpi/src/group.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/tmpi_init.c.o -c /<>/src/external/thread_mpi/src/tmpi_init.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/topology.c.o -c /<>/src/external/thread_mpi/src/topology.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/scan.c.o -c /<>/src/external/thread_mpi/src/scan.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/numa_malloc.c.o -c /<>/src/external/thread_mpi/src/numa_malloc.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/once.c.o -c /<>/src/external/thread_mpi/src/once.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/__/external/lmfit/lmmin.cpp.o -c /<>/src/external/lmfit/lmmin.cpp cd /<>/build/basic-dp/src/gromacs && /usr/bin/cc -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/basic-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fPIC -fopenmp -o CMakeFiles/libgromacs.dir/utility/baseversion-gen.c.o -c /<>/build/basic-dp/src/gromacs/utility/baseversion-gen.c cd /<>/build/basic-dp/src/gromacs && /usr/bin/cmake -E cmake_link_script CMakeFiles/libgromacs.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libgromacs_d.so.3 -o ../../lib/libgromacs_d.so.3.0.0 @CMakeFiles/libgromacs.dir/objects1.rsp /usr/lib/aarch64-linux-gnu/libhwloc.so -ldl -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so -lpthread -fopenmp -lm /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/liblapack.so -lpthread -lm cd /<>/build/basic-dp/src/gromacs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libgromacs_d.so.3.0.0 ../../lib/libgromacs_d.so.3 ../../lib/libgromacs_d.so make[3]: Leaving directory '/<>/build/basic-dp' [ 98%] Built target libgromacs /usr/bin/make -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/depend /usr/bin/make -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/depend make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/share/template /<>/build/basic-dp /<>/build/basic-dp/share/template /<>/build/basic-dp/share/template/CMakeFiles/template.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic-dp /<>/build/basic-dp/src/programs /<>/build/basic-dp/src/programs/CMakeFiles/gmx.dir/DependInfo.cmake --color= Scanning dependencies of target gmx make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build Scanning dependencies of target template make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/gmx.dir/gmx.cpp.o -c /<>/src/programs/gmx.cpp make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/build cd /<>/build/basic-dp/src/programs && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/gmx.dir/legacymodules.cpp.o -c /<>/src/programs/legacymodules.cpp make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/share/template && /usr/bin/c++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/template.dir/template.cpp.o -c /<>/share/template/template.cpp cd /<>/build/basic-dp/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gmx.dir/gmx.cpp.o CMakeFiles/gmx.dir/legacymodules.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o CMakeFiles/view_objlib.dir/view/3dview.cpp.o CMakeFiles/view_objlib.dir/view/buttons.cpp.o CMakeFiles/view_objlib.dir/view/dialogs.cpp.o CMakeFiles/view_objlib.dir/view/fgrid.cpp.o CMakeFiles/view_objlib.dir/view/filter.cpp.o CMakeFiles/view_objlib.dir/view/logo.cpp.o CMakeFiles/view_objlib.dir/view/manager.cpp.o CMakeFiles/view_objlib.dir/view/molps.cpp.o CMakeFiles/view_objlib.dir/view/nleg.cpp.o CMakeFiles/view_objlib.dir/view/nmol.cpp.o CMakeFiles/view_objlib.dir/view/popup.cpp.o CMakeFiles/view_objlib.dir/view/pulldown.cpp.o CMakeFiles/view_objlib.dir/view/view.cpp.o CMakeFiles/view_objlib.dir/view/x11.cpp.o CMakeFiles/view_objlib.dir/view/xdlg.cpp.o CMakeFiles/view_objlib.dir/view/xdlghi.cpp.o CMakeFiles/view_objlib.dir/view/xdlgitem.cpp.o CMakeFiles/view_objlib.dir/view/xmb.cpp.o CMakeFiles/view_objlib.dir/view/xutil.cpp.o -o ../../bin/gmx_d ../../lib/libgromacs_d.so.3.0.0 -fopenmp /usr/lib/aarch64-linux-gnu/libX11.so -lm make[3]: Leaving directory '/<>/build/basic-dp' [100%] Built target gmx cd /<>/build/basic-dp/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/template.dir/template.cpp.o -o ../../bin/template ../../lib/libgromacs_d.so.3.0.0 -fopenmp -lm make[3]: Leaving directory '/<>/build/basic-dp' [100%] Built target template make[2]: Leaving directory '/<>/build/basic-dp' /usr/bin/cmake -E cmake_progress_start /<>/build/basic-dp/CMakeFiles 0 make[1]: Leaving directory '/<>/build/basic-dp' LD_LIBRARY_PATH=/<>/build/basic/lib /usr/bin/make -j4 -C build/basic check make[1]: Entering directory '/<>/build/basic' /usr/bin/cmake -H/<> -B/<>/build/basic --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/make -f CMakeFiles/Makefile2 check make[2]: Entering directory '/<>/build/basic' /usr/bin/cmake -H/<> -B/<>/build/basic --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/basic/CMakeFiles 96 /usr/bin/make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all make[3]: Entering directory '/<>/build/basic' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/depend /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/depend /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[4]: Entering directory '/<>/build/basic' make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/external/gmock-1.7.0 /<>/build/basic /<>/build/basic/src/external/gmock-1.7.0 /<>/build/basic/src/external/gmock-1.7.0/CMakeFiles/gmock.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic /<>/build/basic/src/programs/mdrun/tests /<>/build/basic/src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/DependInfo.cmake --color= cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic /<>/build/basic/src/gromacs /<>/build/basic/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic /<>/build/basic/src/programs /<>/build/basic/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[4]: Entering directory '/<>/build/basic' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[4]: Leaving directory '/<>/build/basic' make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build [ 1%] Built target tng_io_obj /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend Scanning dependencies of target gmock make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/basic /<>/build/basic/src/gromacs/onlinehelp/tests /<>/build/basic/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/external/gmock-1.7.0 && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /<>/src/external/gmock-1.7.0/src/gmock-all.cc make[4]: Entering directory '/<>/build/basic' make[4]: Nothing to be done for 'src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build'. make[4]: Leaving directory '/<>/build/basic' make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build Scanning dependencies of target onlinehelp-test-shared make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /<>/src/gromacs/onlinehelp/tests/mock_helptopic.cpp [ 1%] Built target mdrun_test_objlib make[4]: Entering directory '/<>/build/basic' make[4]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/basic /<>/build/basic/src/gromacs/mdrunutility/tests /<>/build/basic/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake --color= [ 1%] Built target mdrun_objlib /usr/bin/make -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/analysisdata/tests /<>/build/basic /<>/build/basic/src/gromacs/analysisdata/tests /<>/build/basic/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-test-shared make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp Scanning dependencies of target analysisdata-test-shared make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -c /<>/src/gromacs/analysisdata/tests/datatest.cpp cd /<>/build/basic/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -c /<>/src/gromacs/analysisdata/tests/mock_datamodule.cpp make[4]: Leaving directory '/<>/build/basic' [ 1%] Built target mdrunutility-test-shared /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[4]: Leaving directory '/<>/build/basic' [ 1%] Built target onlinehelp-test-shared cd /<>/build/basic/src/external/gmock-1.7.0 && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -Wno-unused-variable -o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o -c /<>/src/external/gmock-1.7.0/gtest/src/gtest-all.cc make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic /<>/build/basic/src/gromacs /<>/build/basic/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[4]: Entering directory '/<>/build/basic' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[4]: Leaving directory '/<>/build/basic' [ 78%] Built target libgromacs make[4]: Leaving directory '/<>/build/basic' [ 78%] Built target analysisdata-test-shared cd /<>/build/basic/src/external/gmock-1.7.0 && /usr/bin/cmake -P CMakeFiles/gmock.dir/cmake_clean_target.cmake cd /<>/build/basic/src/external/gmock-1.7.0 && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libgmock.a CMakeFiles/gmock.dir/src/gmock-all.cc.o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o /usr/bin/ranlib ../../../lib/libgmock.a make[4]: Leaving directory '/<>/build/basic' [ 78%] Built target gmock /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils /<>/build/basic /<>/build/basic/src/testutils /<>/build/basic/src/testutils/CMakeFiles/testutils.dir/DependInfo.cmake --color= Scanning dependencies of target testutils make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/cmdlinetest.cpp.o -c /<>/src/testutils/cmdlinetest.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/conftest.cpp.o -c /<>/src/testutils/conftest.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/filematchers.cpp.o -c /<>/src/testutils/filematchers.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/interactivetest.cpp.o -c /<>/src/testutils/interactivetest.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/loggertest.cpp.o -c /<>/src/testutils/loggertest.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpi-printer.cpp.o -c /<>/src/testutils/mpi-printer.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /<>/src/testutils/mpitest.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata.cpp.o -c /<>/src/testutils/refdata.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata-xml.cpp.o -c /<>/src/testutils/refdata-xml.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stdiohelper.cpp.o -c /<>/src/testutils/stdiohelper.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stringtest.cpp.o -c /<>/src/testutils/stringtest.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testasserts.cpp.o -c /<>/src/testutils/testasserts.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfilemanager.cpp.o -c /<>/src/testutils/testfilemanager.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfileredirector.cpp.o -c /<>/src/testutils/testfileredirector.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testinit.cpp.o -c /<>/src/testutils/testinit.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testoptions.cpp.o -c /<>/src/testutils/testoptions.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/textblockmatchers.cpp.o -c /<>/src/testutils/textblockmatchers.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/xvgtest.cpp.o -c /<>/src/testutils/xvgtest.cpp cd /<>/build/basic/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o -c /<>/src/external/tinyxml2/tinyxml2.cpp cd /<>/build/basic/src/testutils && /usr/bin/cmake -P CMakeFiles/testutils.dir/cmake_clean_target.cmake cd /<>/build/basic/src/testutils && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils.dir/link.txt --verbose=1 /usr/bin/ar qc ../../lib/libtestutils.a CMakeFiles/testutils.dir/cmdlinetest.cpp.o CMakeFiles/testutils.dir/conftest.cpp.o CMakeFiles/testutils.dir/filematchers.cpp.o CMakeFiles/testutils.dir/interactivetest.cpp.o CMakeFiles/testutils.dir/loggertest.cpp.o CMakeFiles/testutils.dir/mpi-printer.cpp.o CMakeFiles/testutils.dir/mpitest.cpp.o CMakeFiles/testutils.dir/refdata.cpp.o CMakeFiles/testutils.dir/refdata-xml.cpp.o CMakeFiles/testutils.dir/stdiohelper.cpp.o CMakeFiles/testutils.dir/stringtest.cpp.o CMakeFiles/testutils.dir/testasserts.cpp.o CMakeFiles/testutils.dir/testfilemanager.cpp.o CMakeFiles/testutils.dir/testfileredirector.cpp.o CMakeFiles/testutils.dir/testinit.cpp.o CMakeFiles/testutils.dir/testoptions.cpp.o CMakeFiles/testutils.dir/textblockmatchers.cpp.o CMakeFiles/testutils.dir/xvgtest.cpp.o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o /usr/bin/ranlib ../../lib/libtestutils.a make[4]: Leaving directory '/<>/build/basic' [ 80%] Built target testutils /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/depend make[4]: Entering directory '/<>/build/basic' make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic /<>/build/basic/src/programs/mdrun/tests /<>/build/basic/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/DependInfo.cmake --color= cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/basic /<>/build/basic/src/testutils/tests /<>/build/basic/src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/DependInfo.cmake --color= /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/depend /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdlib/tests /<>/build/basic /<>/build/basic/src/gromacs/mdlib/tests /<>/build/basic/src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/basic /<>/build/basic/src/testutils/tests /<>/build/basic/src/testutils/tests/CMakeFiles/testutils-test.dir/DependInfo.cmake --color= Scanning dependencies of target testutils-mpi-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build Scanning dependencies of target mdrun-mpi-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o -c /<>/src/testutils/tests/mpitest.cpp make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/multisim.cpp.o -c /<>/src/programs/mdrun/tests/multisim.cpp Scanning dependencies of target mdlib-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/tests/calc_verletbuf.cpp Scanning dependencies of target testutils-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/interactivetest.cpp.o -c /<>/src/testutils/tests/interactivetest.cpp cd /<>/build/basic/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /<>/src/gromacs/mdlib/tests/settle.cpp cd /<>/build/basic/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-mpi-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-mpi-test ../../../lib/libtestutils.a ../../../lib/libgromacs.so.3.0.0 ../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 80%] Built target testutils-mpi-test /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/applied-forces/tests /<>/build/basic /<>/build/basic/src/gromacs/applied-forces/tests /<>/build/basic/src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target applied-forces-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/applied-forces/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/electricfield.cpp.o -c /<>/src/gromacs/applied-forces/tests/electricfield.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/multisimtest.cpp.o -c /<>/src/programs/mdrun/tests/multisimtest.cpp cd /<>/build/basic/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o -c /<>/src/testutils/tests/refdata_tests.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/replicaexchange.cpp.o -c /<>/src/programs/mdrun/tests/replicaexchange.cpp cd /<>/build/basic/src/gromacs/applied-forces/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/applied-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied-forces-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/applied-forces-test.dir/electricfield.cpp.o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/applied-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 81%] Built target applied-forces-test /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/listed-forces/tests /<>/build/basic /<>/build/basic/src/gromacs/listed-forces/tests /<>/build/basic/src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target listed-forces-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/listed-forces/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/bonded.cpp.o -c /<>/src/gromacs/listed-forces/tests/bonded.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o -c /<>/src/programs/mdrun/tests/domain_decomposition.cpp cd /<>/build/basic/src/gromacs/listed-forces/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /<>/src/gromacs/mdlib/tests/shake.cpp cd /<>/build/basic/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /<>/src/testutils/tests/testasserts_tests.cpp cd /<>/build/basic/src/gromacs/listed-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed-forces-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/listed-forces-test.dir/bonded.cpp.o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/listed-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 81%] Built target listed-forces-test /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/commandline/tests /<>/build/basic /<>/build/basic/src/gromacs/commandline/tests /<>/build/basic/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake --color= cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-test.dir/link.txt --verbose=1 Scanning dependencies of target commandline-test /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrun-mpi-test.dir/multisim.cpp.o CMakeFiles/mdrun-mpi-test.dir/multisimtest.cpp.o CMakeFiles/mdrun-mpi-test.dir/replicaexchange.cpp.o CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrun_test_objlib.dir/energyreader.cpp.o CMakeFiles/mdrun_test_objlib.dir/mdruncomparisonfixture.cpp.o CMakeFiles/mdrun_test_objlib.dir/moduletest.cpp.o CMakeFiles/mdrun_test_objlib.dir/terminationhelper.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -o ../../../../bin/mdrun-mpi-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp make[4]: Leaving directory '/<>/build/basic' [ 81%] Built target mdrun-mpi-test /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/ewald/tests /<>/build/basic /<>/build/basic/src/gromacs/ewald/tests /<>/build/basic/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake --color= Scanning dependencies of target ewald-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmebsplinetest.cpp cd /<>/build/basic/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -c /<>/src/testutils/tests/xvgtest_tests.cpp cd /<>/build/basic/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /<>/src/gromacs/mdlib/tests/simulationsignal.cpp cd /<>/build/basic/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /<>/src/gromacs/ewald/tests/pmegathertest.cpp cd /<>/build/basic/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp cd /<>/build/basic/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-test.dir/interactivetest.cpp.o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-test ../../../lib/libtestutils.a ../../../lib/libgromacs.so.3.0.0 ../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 82%] Built target testutils-test /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fft/tests /<>/build/basic /<>/build/basic/src/gromacs/fft/tests /<>/build/basic/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake --color= Scanning dependencies of target fft-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/fft/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/fft.cpp.o -c /<>/src/gromacs/fft/tests/fft.cpp cd /<>/build/basic/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp cd /<>/build/basic/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o CMakeFiles/mdlib-test.dir/settle.cpp.o CMakeFiles/mdlib-test.dir/shake.cpp.o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/mdlib-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 83%] Built target mdlib-test /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gpu_utils/tests /<>/build/basic /<>/build/basic/src/gromacs/gpu_utils/tests /<>/build/basic/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake --color= Scanning dependencies of target gpu_utils-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/gpu_utils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/gputest.cpp.o -c /<>/src/gromacs/gpu_utils/tests/gputest.cpp cd /<>/build/basic/src/gromacs/gpu_utils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /<>/src/gromacs/gpu_utils/tests/hostallocator.cpp cd /<>/build/basic/src/gromacs/fft/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fft-test.dir/fft.cpp.o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fft-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 84%] Built target fft-test /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/hardware/tests /<>/build/basic /<>/build/basic/src/gromacs/hardware/tests /<>/build/basic/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake --color= Scanning dependencies of target hardware-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/hardware/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /<>/src/gromacs/hardware/tests/hardwaretopology.cpp cd /<>/build/basic/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp cd /<>/build/basic/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesolvetest.cpp cd /<>/build/basic/src/gromacs/gpu_utils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -c /<>/src/gromacs/gpu_utils/tests/devicetransfers.cpp cd /<>/build/basic/src/gromacs/gpu_utils/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gpu_utils-test.dir/gputest.cpp.o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gpu_utils-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 85%] Built target gpu_utils-test /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/math/tests /<>/build/basic /<>/build/basic/src/gromacs/math/tests /<>/build/basic/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake --color= Scanning dependencies of target math-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/math/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/functions.cpp.o -c /<>/src/gromacs/math/tests/functions.cpp cd /<>/build/basic/src/gromacs/hardware/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineparser.cpp cd /<>/build/basic/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/hardware-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 85%] Built target hardware-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/basic /<>/build/basic/src/gromacs/mdrunutility/tests /<>/build/basic/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity.cpp cd /<>/build/basic/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesplinespreadtest.cpp cd /<>/build/basic/src/gromacs/math/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/invertmatrix.cpp.o -c /<>/src/gromacs/math/tests/invertmatrix.cpp cd /<>/build/basic/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp cd /<>/build/basic/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 85%] Built target mdrunutility-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/basic /<>/build/basic/src/gromacs/mdrunutility/tests /<>/build/basic/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-mpi-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity-mpi.cpp cd /<>/build/basic/src/gromacs/math/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /<>/src/gromacs/math/tests/vectypes.cpp cd /<>/build/basic/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c /<>/src/gromacs/commandline/tests/pargs.cpp cd /<>/build/basic/src/gromacs/math/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/math-test.dir/functions.cpp.o CMakeFiles/math-test.dir/invertmatrix.cpp.o CMakeFiles/math-test.dir/vectypes.cpp.o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/math-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 85%] Built target math-test /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/basic /<>/build/basic/src/gromacs/onlinehelp/tests /<>/build/basic/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake --color= Scanning dependencies of target onlinehelp-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpformat.cpp cd /<>/build/basic/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /<>/src/gromacs/ewald/tests/pmetestcommon.cpp cd /<>/build/basic/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpmanager.cpp cd /<>/build/basic/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-mpi-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp make[4]: Leaving directory '/<>/build/basic' [ 86%] Built target mdrunutility-mpi-test /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/options/tests /<>/build/basic /<>/build/basic/src/gromacs/options/tests /<>/build/basic/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake --color= Scanning dependencies of target options-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /<>/src/gromacs/options/tests/abstractoptionstorage.cpp cd /<>/build/basic/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o -c /<>/src/gromacs/ewald/tests/testhardwarecontexts.cpp cd /<>/build/basic/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o CMakeFiles/commandline-test.dir/pargs.cpp.o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o ../../onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/commandline-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 87%] Built target commandline-test /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/random/tests /<>/build/basic /<>/build/basic/src/gromacs/random/tests /<>/build/basic/src/gromacs/random/tests/CMakeFiles/random-test.dir/DependInfo.cmake --color= Scanning dependencies of target random-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -c /<>/src/gromacs/random/tests/exponentialdistribution.cpp cd /<>/build/basic/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/ewald-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpwritercontext.cpp make[4]: Leaving directory '/<>/build/basic' [ 87%] Built target ewald-test /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/tables/tests /<>/build/basic /<>/build/basic/src/gromacs/tables/tests /<>/build/basic/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake --color= Scanning dependencies of target table-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/tables/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/splinetable.cpp.o -c /<>/src/gromacs/tables/tests/splinetable.cpp cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /<>/src/gromacs/random/tests/gammadistribution.cpp cd /<>/build/basic/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/onlinehelp-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 88%] Built target onlinehelp-test /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/taskassignment/tests /<>/build/basic /<>/build/basic/src/gromacs/taskassignment/tests /<>/build/basic/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake --color= Scanning dependencies of target taskassignment-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/taskassignment/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -c /<>/src/gromacs/taskassignment/tests/usergpuids.cpp cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /<>/src/gromacs/random/tests/normaldistribution.cpp cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /<>/src/gromacs/options/tests/filenameoption.cpp cd /<>/build/basic/src/gromacs/taskassignment/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/seed.cpp.o -c /<>/src/gromacs/random/tests/seed.cpp cd /<>/build/basic/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/taskassignment-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 88%] Built target taskassignment-test /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/utility/tests /<>/build/basic /<>/build/basic/src/gromacs/utility/tests /<>/build/basic/src/gromacs/utility/tests/CMakeFiles/utility-test.dir/DependInfo.cmake --color= Scanning dependencies of target utility-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/alignedallocator.cpp.o -c /<>/src/gromacs/utility/tests/alignedallocator.cpp cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -c /<>/src/gromacs/options/tests/filenameoptionmanager.cpp cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /<>/src/gromacs/random/tests/tabulatednormaldistribution.cpp cd /<>/build/basic/src/gromacs/tables/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/table-test.dir/splinetable.cpp.o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/table-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 89%] Built target table-test cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/threefry.cpp.o -c /<>/src/gromacs/random/tests/threefry.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/arrayref.cpp.o -c /<>/src/gromacs/utility/tests/arrayref.cpp cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformintdistribution.cpp cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/option.cpp.o -c /<>/src/gromacs/options/tests/option.cpp cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /<>/src/gromacs/options/tests/optionsassigner.cpp cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformrealdistribution.cpp cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /<>/src/gromacs/options/tests/repeatingsection.cpp cd /<>/build/basic/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/random-test.dir/exponentialdistribution.cpp.o CMakeFiles/random-test.dir/gammadistribution.cpp.o CMakeFiles/random-test.dir/normaldistribution.cpp.o CMakeFiles/random-test.dir/seed.cpp.o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o CMakeFiles/random-test.dir/threefry.cpp.o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/random-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 90%] Built target random-test /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fileio/tests /<>/build/basic /<>/build/basic/src/gromacs/fileio/tests /<>/build/basic/src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/DependInfo.cmake --color= Scanning dependencies of target fileio-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/fileio/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /<>/src/gromacs/fileio/tests/confio.cpp cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /<>/src/gromacs/options/tests/timeunitmanager.cpp cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/treesupport.cpp.o -c /<>/src/gromacs/options/tests/treesupport.cpp cd /<>/build/basic/src/gromacs/fileio/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/readinp.cpp.o -c /<>/src/gromacs/fileio/tests/readinp.cpp cd /<>/build/basic/src/gromacs/fileio/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /<>/src/gromacs/fileio/tests/tngio.cpp cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/fileio/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /<>/src/gromacs/utility/tests/bitmask32.cpp cd /<>/build/basic/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fileio-test.dir/confio.cpp.o CMakeFiles/fileio-test.dir/readinp.cpp.o CMakeFiles/fileio-test.dir/tngio.cpp.o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fileio-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 90%] Built target fileio-test /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/pulling/tests /<>/build/basic /<>/build/basic/src/gromacs/pulling/tests /<>/build/basic/src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/DependInfo.cmake --color= Scanning dependencies of target pull-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/pulling/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/pull.cpp.o -c /<>/src/gromacs/pulling/tests/pull.cpp cd /<>/build/basic/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o CMakeFiles/options-test.dir/filenameoption.cpp.o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o CMakeFiles/options-test.dir/option.cpp.o CMakeFiles/options-test.dir/optionsassigner.cpp.o CMakeFiles/options-test.dir/repeatingsection.cpp.o CMakeFiles/options-test.dir/timeunitmanager.cpp.o CMakeFiles/options-test.dir/treesupport.cpp.o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/options-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 91%] Built target options-test /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/awh/tests /<>/build/basic /<>/build/basic/src/gromacs/awh/tests /<>/build/basic/src/gromacs/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake --color= Scanning dependencies of target awh-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/awh/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/bias.cpp.o -c /<>/src/gromacs/awh/tests/bias.cpp cd /<>/build/basic/src/gromacs/pulling/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/pull-test.dir/pull.cpp.o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/pull-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask64.cpp.o -c /<>/src/gromacs/utility/tests/bitmask64.cpp make[4]: Leaving directory '/<>/build/basic' [ 91%] Built target pull-test /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/simd/tests /<>/build/basic /<>/build/basic/src/gromacs/simd/tests /<>/build/basic/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake --color= Scanning dependencies of target simd-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /<>/src/gromacs/simd/tests/bootstrap_loadstore.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/base.cpp.o -c /<>/src/gromacs/simd/tests/base.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /<>/src/gromacs/utility/tests/bitmask128.cpp cd /<>/build/basic/src/gromacs/awh/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /<>/src/gromacs/awh/tests/biasstate.cpp cd /<>/build/basic/src/gromacs/awh/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/grid.cpp.o -c /<>/src/gromacs/awh/tests/grid.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/data.cpp.o -c /<>/src/gromacs/simd/tests/data.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd.cpp.o -c /<>/src/gromacs/simd/tests/simd.cpp cd /<>/build/basic/src/gromacs/awh/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreeserializer.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreetransform.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint.cpp cd /<>/build/basic/src/gromacs/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/awh-test.dir/bias.cpp.o CMakeFiles/awh-test.dir/biasstate.cpp.o CMakeFiles/awh-test.dir/grid.cpp.o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/awh-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 91%] Built target awh-test /usr/bin/make -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gmxana/tests /<>/build/basic /<>/build/basic/src/gromacs/gmxana/tests /<>/build/basic/src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/DependInfo.cmake --color= Scanning dependencies of target gmxana-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/gmxana/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gmxana/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o -c /<>/src/gromacs/gmxana/tests/gmx_traj.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/logger.cpp.o -c /<>/src/gromacs/utility/tests/logger.cpp cd /<>/build/basic/src/gromacs/gmxana/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gmxana/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxana-test.dir/gmx_trjconv.cpp.o -c /<>/src/gromacs/gmxana/tests/gmx_trjconv.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/mutex.cpp.o -c /<>/src/gromacs/utility/tests/mutex.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint_util.cpp cd /<>/build/basic/src/gromacs/gmxana/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gmxana/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/path.cpp.o -c /<>/src/gromacs/utility/tests/path.cpp cd /<>/build/basic/src/gromacs/gmxana/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxana-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o CMakeFiles/gmxana-test.dir/gmx_trjconv.cpp.o CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gmxana-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 91%] Built target gmxana-test /usr/bin/make -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gmxpreprocess/tests /<>/build/basic /<>/build/basic/src/gromacs/gmxpreprocess/tests /<>/build/basic/src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/DependInfo.cmake --color= Scanning dependencies of target gmxpreprocess-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -c /<>/src/gromacs/gmxpreprocess/tests/genconf.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /<>/src/gromacs/utility/tests/stringutil.cpp cd /<>/build/basic/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/insert-molecules.cpp.o -c /<>/src/gromacs/gmxpreprocess/tests/insert-molecules.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /<>/src/gromacs/utility/tests/textreader.cpp cd /<>/build/basic/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -c /<>/src/gromacs/gmxpreprocess/tests/readir.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd_vector_operations.cpp cd /<>/build/basic/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -c /<>/src/gromacs/gmxpreprocess/tests/solvate.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /<>/src/gromacs/simd/tests/simd_math.cpp cd /<>/build/basic/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxpreprocess-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o CMakeFiles/gmxpreprocess-test.dir/insert-molecules.cpp.o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gmxpreprocess-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 91%] Built target gmxpreprocess-test /usr/bin/make -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/correlationfunctions/tests /<>/build/basic /<>/build/basic/src/gromacs/correlationfunctions/tests /<>/build/basic/src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/DependInfo.cmake --color= Scanning dependencies of target correlations-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/autocorr.cpp.o -c /<>/src/gromacs/correlationfunctions/tests/autocorr.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /<>/src/gromacs/utility/tests/textwriter.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /<>/src/gromacs/utility/tests/typetraits.cpp cd /<>/build/basic/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -c /<>/src/gromacs/correlationfunctions/tests/manyautocorrelation.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_memory.cpp.o -c /<>/src/gromacs/simd/tests/simd_memory.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_integer.cpp.o -c /<>/src/gromacs/simd/tests/simd_integer.cpp cd /<>/build/basic/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/utility-test.dir/alignedallocator.cpp.o CMakeFiles/utility-test.dir/arrayref.cpp.o CMakeFiles/utility-test.dir/bitmask32.cpp.o CMakeFiles/utility-test.dir/bitmask64.cpp.o CMakeFiles/utility-test.dir/bitmask128.cpp.o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o CMakeFiles/utility-test.dir/logger.cpp.o CMakeFiles/utility-test.dir/mutex.cpp.o CMakeFiles/utility-test.dir/path.cpp.o CMakeFiles/utility-test.dir/stringutil.cpp.o CMakeFiles/utility-test.dir/textreader.cpp.o CMakeFiles/utility-test.dir/textwriter.cpp.o CMakeFiles/utility-test.dir/typetraits.cpp.o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/utility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/correlationdataset.cpp.o -c /<>/src/gromacs/correlationfunctions/tests/correlationdataset.cpp make[4]: Leaving directory '/<>/build/basic' [ 93%] Built target utility-test /usr/bin/make -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/analysisdata/tests /<>/build/basic /<>/build/basic/src/gromacs/analysisdata/tests /<>/build/basic/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/DependInfo.cmake --color= Scanning dependencies of target analysisdata-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -c /<>/src/gromacs/analysisdata/tests/analysisdata.cpp cd /<>/build/basic/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/expfit.cpp.o -c /<>/src/gromacs/correlationfunctions/tests/expfit.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /<>/src/gromacs/simd/tests/simd4.cpp cd /<>/build/basic/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/correlationfunctions/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/correlations-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/correlations-test.dir/autocorr.cpp.o CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o CMakeFiles/correlations-test.dir/correlationdataset.cpp.o CMakeFiles/correlations-test.dir/expfit.cpp.o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/correlations-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 94%] Built target correlations-test /usr/bin/make -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/selection/tests /<>/build/basic /<>/build/basic/src/gromacs/selection/tests /<>/build/basic/src/gromacs/selection/tests/CMakeFiles/selection-test.dir/DependInfo.cmake --color= Scanning dependencies of target selection-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/indexutil.cpp.o -c /<>/src/gromacs/selection/tests/indexutil.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd4_floatingpoint.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd4_vector_operations.cpp cd /<>/build/basic/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/nbsearch.cpp.o -c /<>/src/gromacs/selection/tests/nbsearch.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /<>/src/gromacs/simd/tests/simd4_math.cpp cd /<>/build/basic/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -c /<>/src/gromacs/analysisdata/tests/arraydata.cpp cd /<>/build/basic/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/average.cpp.o -c /<>/src/gromacs/analysisdata/tests/average.cpp cd /<>/build/basic/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/histogram.cpp.o -c /<>/src/gromacs/analysisdata/tests/histogram.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /<>/src/gromacs/simd/tests/scalar.cpp cd /<>/build/basic/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -c /<>/src/gromacs/analysisdata/tests/lifetime.cpp cd /<>/build/basic/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/poscalc.cpp.o -c /<>/src/gromacs/selection/tests/poscalc.cpp cd /<>/build/basic/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /<>/src/gromacs/simd/tests/scalar_util.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /<>/src/gromacs/simd/tests/scalar_math.cpp cd /<>/build/basic/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o CMakeFiles/analysisdata-test.dir/arraydata.cpp.o CMakeFiles/analysisdata-test.dir/average.cpp.o CMakeFiles/analysisdata-test.dir/histogram.cpp.o CMakeFiles/analysisdata-test.dir/lifetime.cpp.o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -o ../../../../bin/analysisdata-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 94%] Built target analysisdata-test /usr/bin/make -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/trajectoryanalysis/tests /<>/build/basic /<>/build/basic/src/gromacs/trajectoryanalysis/tests /<>/build/basic/src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/DependInfo.cmake --color= Scanning dependencies of target trajectoryanalysis-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/moduletest.cpp cd /<>/build/basic/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/selectioncollection.cpp.o -c /<>/src/gromacs/selection/tests/selectioncollection.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/clustsize.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp cd /<>/build/basic/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o CMakeFiles/simd-test.dir/base.cpp.o CMakeFiles/simd-test.dir/data.cpp.o CMakeFiles/simd-test.dir/simd.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd_math.cpp.o CMakeFiles/simd-test.dir/simd_memory.cpp.o CMakeFiles/simd-test.dir/simd_integer.cpp.o CMakeFiles/simd-test.dir/simd4.cpp.o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd4_math.cpp.o CMakeFiles/simd-test.dir/scalar.cpp.o CMakeFiles/simd-test.dir/scalar_util.cpp.o CMakeFiles/simd-test.dir/scalar_math.cpp.o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/simd-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 95%] Built target simd-test /usr/bin/make -f src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build.make src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/energyanalysis/tests /<>/build/basic /<>/build/basic/src/gromacs/energyanalysis/tests /<>/build/basic/src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/DependInfo.cmake --color= Scanning dependencies of target energyanalysis-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build.make src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/energyanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/energyanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/energyanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o -c /<>/src/gromacs/energyanalysis/tests/legacyenergy.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/angle.cpp cd /<>/build/basic/src/gromacs/energyanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/energyanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/energyanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/distance.cpp cd /<>/build/basic/src/gromacs/energyanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/energyanalysis-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/energyanalysis-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 95%] Built target energyanalysis-test /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/compat/tests /<>/build/basic /<>/build/basic/src/gromacs/compat/tests /<>/build/basic/src/gromacs/compat/tests/CMakeFiles/compat-test.dir/DependInfo.cmake --color= Scanning dependencies of target compat-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/gromacs/compat/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/make_unique.cpp.o -c /<>/src/gromacs/compat/tests/make_unique.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/freevolume.cpp cd /<>/build/basic/src/gromacs/compat/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/pairdist.cpp cd /<>/build/basic/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/compat-test.dir/make_unique.cpp.o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/compat-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 95%] Built target compat-test /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic /<>/build/basic/src/programs/mdrun/tests /<>/build/basic/src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrun-test make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -c /<>/src/programs/mdrun/tests/tabulated_bonded_interactions.cpp cd /<>/build/basic/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/selectionoption.cpp.o -c /<>/src/gromacs/selection/tests/selectionoption.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/rdf.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/sasa.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/grompp.cpp.o -c /<>/src/programs/mdrun/tests/grompp.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/select.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/surfacearea.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/initialconstraints.cpp.o -c /<>/src/programs/mdrun/tests/initialconstraints.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/trajectory.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/unionfind.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/rerun.cpp.o -c /<>/src/programs/mdrun/tests/rerun.cpp cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/toputils.cpp.o -c /<>/src/gromacs/selection/tests/toputils.cpp cd /<>/build/basic/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/trajectory_writing.cpp.o -c /<>/src/programs/mdrun/tests/trajectory_writing.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/trajectoryreader.cpp.o -c /<>/src/programs/mdrun/tests/trajectoryreader.cpp cd /<>/build/basic/src/gromacs/selection/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/selection-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/selection-test.dir/indexutil.cpp.o CMakeFiles/selection-test.dir/nbsearch.cpp.o CMakeFiles/selection-test.dir/poscalc.cpp.o CMakeFiles/selection-test.dir/selectioncollection.cpp.o CMakeFiles/selection-test.dir/selectionoption.cpp.o CMakeFiles/selection-test.dir/toputils.cpp.o CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/selection-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic/src/gromacs/trajectoryanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryanalysis-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o ../../analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o ../../analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -o ../../../../bin/trajectoryanalysis-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [ 96%] Built target selection-test cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/compressed_x_output.cpp.o -c /<>/src/programs/mdrun/tests/compressed_x_output.cpp make[4]: Leaving directory '/<>/build/basic' [ 97%] Built target trajectoryanalysis-test cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -c /<>/src/programs/mdrun/tests/swapcoords.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/interactiveMD.cpp.o -c /<>/src/programs/mdrun/tests/interactiveMD.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/termination.cpp.o -c /<>/src/programs/mdrun/tests/termination.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/pmetest.cpp.o -c /<>/src/programs/mdrun/tests/pmetest.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o CMakeFiles/mdrun-test.dir/grompp.cpp.o CMakeFiles/mdrun-test.dir/initialconstraints.cpp.o CMakeFiles/mdrun-test.dir/rerun.cpp.o CMakeFiles/mdrun-test.dir/trajectory_writing.cpp.o CMakeFiles/mdrun-test.dir/trajectoryreader.cpp.o CMakeFiles/mdrun-test.dir/compressed_x_output.cpp.o CMakeFiles/mdrun-test.dir/swapcoords.cpp.o CMakeFiles/mdrun-test.dir/interactiveMD.cpp.o CMakeFiles/mdrun-test.dir/termination.cpp.o CMakeFiles/mdrun-test.dir/pmetest.cpp.o CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrun_test_objlib.dir/energyreader.cpp.o CMakeFiles/mdrun_test_objlib.dir/mdruncomparisonfixture.cpp.o CMakeFiles/mdrun_test_objlib.dir/moduletest.cpp.o CMakeFiles/mdrun_test_objlib.dir/terminationhelper.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -o ../../../../bin/mdrun-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic' [100%] Built target mdrun-test /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/basic /<>/build/basic /<>/build/basic/CMakeFiles/tests.dir/DependInfo.cmake --color= Scanning dependencies of target tests make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build make[4]: Entering directory '/<>/build/basic' make[4]: Nothing to be done for 'CMakeFiles/tests.dir/build'. make[4]: Leaving directory '/<>/build/basic' [100%] Built target tests /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/basic /<>/build/basic /<>/build/basic/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake --color= Scanning dependencies of target run-ctest-nophys make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build make[4]: Entering directory '/<>/build/basic' /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /<>/build/basic Start 1: TestUtilsUnitTests 1/33 Test #1: TestUtilsUnitTests ............... Passed 0.18 sec Start 2: TestUtilsMpiUnitTests 2/33 Test #2: TestUtilsMpiUnitTests ............ Passed 0.07 sec Start 3: MdlibUnitTest 3/33 Test #3: MdlibUnitTest .................... Passed 0.04 sec Start 4: AppliedForcesUnitTest 4/33 Test #4: AppliedForcesUnitTest ............ Passed 0.03 sec Start 5: ListedForcesTest 5/33 Test #5: ListedForcesTest ................. Passed 0.05 sec Start 6: CommandLineUnitTests 6/33 Test #6: CommandLineUnitTests ............. Passed 0.12 sec Start 7: EwaldUnitTests 7/33 Test #7: EwaldUnitTests ................... Passed 0.96 sec Start 8: FFTUnitTests 8/33 Test #8: FFTUnitTests ..................... Passed 0.15 sec Start 9: GpuUtilsUnitTests 9/33 Test #9: GpuUtilsUnitTests ................ Passed 0.07 sec Start 10: HardwareUnitTests 10/33 Test #10: HardwareUnitTests ................ Passed 0.12 sec Start 11: MathUnitTests 11/33 Test #11: MathUnitTests .................... Passed 0.07 sec Start 12: MdrunUtilityUnitTests 12/33 Test #12: MdrunUtilityUnitTests ............ Passed 0.06 sec Start 13: MdrunUtilityMpiUnitTests 13/33 Test #13: MdrunUtilityMpiUnitTests ......... Passed 2.94 sec Start 14: OnlineHelpUnitTests 14/33 Test #14: OnlineHelpUnitTests .............. Passed 0.07 sec Start 15: OptionsUnitTests 15/33 Test #15: OptionsUnitTests ................. Passed 0.08 sec Start 16: RandomUnitTests 16/33 Test #16: RandomUnitTests .................. Passed 0.11 sec Start 17: TableUnitTests 17/33 Test #17: TableUnitTests ................... Passed 0.51 sec Start 18: TaskAssignmentUnitTests 18/33 Test #18: TaskAssignmentUnitTests .......... Passed 0.05 sec Start 19: UtilityUnitTests 19/33 Test #19: UtilityUnitTests ................. Passed 0.17 sec Start 20: FileIOTests 20/33 Test #20: FileIOTests ...................... Passed 0.07 sec Start 21: PullTest 21/33 Test #21: PullTest ......................... Passed 0.04 sec Start 22: AwhTest 22/33 Test #22: AwhTest .......................... Passed 0.10 sec Start 23: SimdUnitTests 23/33 Test #23: SimdUnitTests .................... Passed 0.29 sec Start 24: GmxAnaTest 24/33 Test #24: GmxAnaTest ....................... Passed 0.15 sec Start 25: GmxPreprocessTests 25/33 Test #25: GmxPreprocessTests ............... Passed 0.64 sec Start 26: CorrelationsTest 26/33 Test #26: CorrelationsTest ................. Passed 0.67 sec Start 27: AnalysisDataUnitTests 27/33 Test #27: AnalysisDataUnitTests ............ Passed 0.22 sec Start 28: SelectionUnitTests 28/33 Test #28: SelectionUnitTests ............... Passed 0.73 sec Start 29: TrajectoryAnalysisUnitTests 29/33 Test #29: TrajectoryAnalysisUnitTests ...... Passed 1.84 sec Start 30: EnergyAnalysisUnitTests 30/33 Test #30: EnergyAnalysisUnitTests .......... Passed 0.28 sec Start 31: CompatibilityHelpersTests 31/33 Test #31: CompatibilityHelpersTests ........ Passed 0.04 sec Start 32: MdrunTests 32/33 Test #32: MdrunTests ....................... Passed 13.88 sec Start 33: MdrunMpiTests 33/33 Test #33: MdrunMpiTests .................... Passed 1.34 sec 100% tests passed, 0 tests failed out of 33 Label Time Summary: GTest = 26.13 sec (33 tests) IntegrationTest = 15.37 sec (3 tests) MpiTest = 4.35 sec (3 tests) UnitTest = 10.76 sec (30 tests) Total Test time (real) = 26.34 sec make[4]: Leaving directory '/<>/build/basic' [100%] Built target run-ctest-nophys /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/tests /<>/build/basic /<>/build/basic/tests /<>/build/basic/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake --color= Scanning dependencies of target missing-tests-notice make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. make[4]: Leaving directory '/<>/build/basic' [100%] Built target missing-tests-notice /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend make[4]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/basic /<>/build/basic /<>/build/basic/CMakeFiles/check.dir/DependInfo.cmake --color= Scanning dependencies of target check make[4]: Leaving directory '/<>/build/basic' /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build make[4]: Entering directory '/<>/build/basic' make[4]: Nothing to be done for 'CMakeFiles/check.dir/build'. make[4]: Leaving directory '/<>/build/basic' [100%] Built target check make[3]: Leaving directory '/<>/build/basic' /usr/bin/cmake -E cmake_progress_start /<>/build/basic/CMakeFiles 0 make[2]: Leaving directory '/<>/build/basic' make[1]: Leaving directory '/<>/build/basic' LD_LIBRARY_PATH=/<>/build/basic-dp/lib /usr/bin/make -j4 -C build/basic-dp check make[1]: Entering directory '/<>/build/basic-dp' /usr/bin/cmake -H/<> -B/<>/build/basic-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/make -f CMakeFiles/Makefile2 check make[2]: Entering directory '/<>/build/basic-dp' /usr/bin/cmake -H/<> -B/<>/build/basic-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/basic-dp/CMakeFiles 96 /usr/bin/make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all make[3]: Entering directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/depend /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/depend /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic-dp /<>/build/basic-dp/src/programs /<>/build/basic-dp/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic-dp /<>/build/basic-dp/src/gromacs /<>/build/basic-dp/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic-dp /<>/build/basic-dp/src/programs/mdrun/tests /<>/build/basic-dp/src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/external/gmock-1.7.0 /<>/build/basic-dp /<>/build/basic-dp/src/external/gmock-1.7.0 /<>/build/basic-dp/src/external/gmock-1.7.0/CMakeFiles/gmock.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[4]: Entering directory '/<>/build/basic-dp' make[4]: Entering directory '/<>/build/basic-dp' make[4]: Nothing to be done for 'src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build'. make[4]: Leaving directory '/<>/build/basic-dp' make[4]: Leaving directory '/<>/build/basic-dp' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[4]: Leaving directory '/<>/build/basic-dp' Scanning dependencies of target gmock make[4]: Entering directory '/<>/build/basic-dp' make[4]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. make[4]: Leaving directory '/<>/build/basic-dp' make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/external/gmock-1.7.0 && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /<>/src/external/gmock-1.7.0/src/gmock-all.cc [ 0%] Built target mdrun_test_objlib /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/onlinehelp/tests /<>/build/basic-dp/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake --color= [ 0%] Built target mdrun_objlib /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/mdrunutility/tests /<>/build/basic-dp/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake --color= [ 1%] Built target tng_io_obj /usr/bin/make -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/analysisdata/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/analysisdata/tests /<>/build/basic-dp/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-test-shared make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp Scanning dependencies of target onlinehelp-test-shared make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /<>/src/gromacs/onlinehelp/tests/mock_helptopic.cpp Scanning dependencies of target analysisdata-test-shared make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -c /<>/src/gromacs/analysisdata/tests/datatest.cpp cd /<>/build/basic-dp/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -c /<>/src/gromacs/analysisdata/tests/mock_datamodule.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 1%] Built target onlinehelp-test-shared /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic-dp /<>/build/basic-dp/src/gromacs /<>/build/basic-dp/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/basic-dp' [ 1%] Built target mdrunutility-test-shared cd /<>/build/basic-dp/src/external/gmock-1.7.0 && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -Wno-unused-variable -o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o -c /<>/src/external/gmock-1.7.0/gtest/src/gtest-all.cc make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[4]: Entering directory '/<>/build/basic-dp' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[4]: Leaving directory '/<>/build/basic-dp' [ 78%] Built target libgromacs make[4]: Leaving directory '/<>/build/basic-dp' [ 78%] Built target analysisdata-test-shared cd /<>/build/basic-dp/src/external/gmock-1.7.0 && /usr/bin/cmake -P CMakeFiles/gmock.dir/cmake_clean_target.cmake cd /<>/build/basic-dp/src/external/gmock-1.7.0 && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libgmock.a CMakeFiles/gmock.dir/src/gmock-all.cc.o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o /usr/bin/ranlib ../../../lib/libgmock.a make[4]: Leaving directory '/<>/build/basic-dp' [ 78%] Built target gmock /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils /<>/build/basic-dp /<>/build/basic-dp/src/testutils /<>/build/basic-dp/src/testutils/CMakeFiles/testutils.dir/DependInfo.cmake --color= Scanning dependencies of target testutils make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/cmdlinetest.cpp.o -c /<>/src/testutils/cmdlinetest.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/conftest.cpp.o -c /<>/src/testutils/conftest.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/filematchers.cpp.o -c /<>/src/testutils/filematchers.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/interactivetest.cpp.o -c /<>/src/testutils/interactivetest.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/loggertest.cpp.o -c /<>/src/testutils/loggertest.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpi-printer.cpp.o -c /<>/src/testutils/mpi-printer.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /<>/src/testutils/mpitest.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata.cpp.o -c /<>/src/testutils/refdata.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata-xml.cpp.o -c /<>/src/testutils/refdata-xml.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stdiohelper.cpp.o -c /<>/src/testutils/stdiohelper.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stringtest.cpp.o -c /<>/src/testutils/stringtest.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testasserts.cpp.o -c /<>/src/testutils/testasserts.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfilemanager.cpp.o -c /<>/src/testutils/testfilemanager.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfileredirector.cpp.o -c /<>/src/testutils/testfileredirector.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testinit.cpp.o -c /<>/src/testutils/testinit.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testoptions.cpp.o -c /<>/src/testutils/testoptions.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/textblockmatchers.cpp.o -c /<>/src/testutils/textblockmatchers.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/xvgtest.cpp.o -c /<>/src/testutils/xvgtest.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o -c /<>/src/external/tinyxml2/tinyxml2.cpp cd /<>/build/basic-dp/src/testutils && /usr/bin/cmake -P CMakeFiles/testutils.dir/cmake_clean_target.cmake cd /<>/build/basic-dp/src/testutils && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils.dir/link.txt --verbose=1 /usr/bin/ar qc ../../lib/libtestutils.a CMakeFiles/testutils.dir/cmdlinetest.cpp.o CMakeFiles/testutils.dir/conftest.cpp.o CMakeFiles/testutils.dir/filematchers.cpp.o CMakeFiles/testutils.dir/interactivetest.cpp.o CMakeFiles/testutils.dir/loggertest.cpp.o CMakeFiles/testutils.dir/mpi-printer.cpp.o CMakeFiles/testutils.dir/mpitest.cpp.o CMakeFiles/testutils.dir/refdata.cpp.o CMakeFiles/testutils.dir/refdata-xml.cpp.o CMakeFiles/testutils.dir/stdiohelper.cpp.o CMakeFiles/testutils.dir/stringtest.cpp.o CMakeFiles/testutils.dir/testasserts.cpp.o CMakeFiles/testutils.dir/testfilemanager.cpp.o CMakeFiles/testutils.dir/testfileredirector.cpp.o CMakeFiles/testutils.dir/testinit.cpp.o CMakeFiles/testutils.dir/testoptions.cpp.o CMakeFiles/testutils.dir/textblockmatchers.cpp.o CMakeFiles/testutils.dir/xvgtest.cpp.o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o /usr/bin/ranlib ../../lib/libtestutils.a make[4]: Leaving directory '/<>/build/basic-dp' [ 80%] Built target testutils /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/depend /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/basic-dp /<>/build/basic-dp/src/testutils/tests /<>/build/basic-dp/src/testutils/tests/CMakeFiles/testutils-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic-dp /<>/build/basic-dp/src/programs/mdrun/tests /<>/build/basic-dp/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/basic-dp /<>/build/basic-dp/src/testutils/tests /<>/build/basic-dp/src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdlib/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/mdlib/tests /<>/build/basic-dp/src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/DependInfo.cmake --color= Scanning dependencies of target testutils-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/interactivetest.cpp.o -c /<>/src/testutils/tests/interactivetest.cpp Scanning dependencies of target testutils-mpi-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o -c /<>/src/testutils/tests/mpitest.cpp Scanning dependencies of target mdlib-test Scanning dependencies of target mdrun-mpi-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/tests/calc_verletbuf.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/multisim.cpp.o -c /<>/src/programs/mdrun/tests/multisim.cpp cd /<>/build/basic-dp/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-mpi-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-mpi-test ../../../lib/libtestutils.a ../../../lib/libgromacs_d.so.3.0.0 ../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 80%] Built target testutils-mpi-test /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/applied-forces/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/applied-forces/tests /<>/build/basic-dp/src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target applied-forces-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/applied-forces/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/electricfield.cpp.o -c /<>/src/gromacs/applied-forces/tests/electricfield.cpp cd /<>/build/basic-dp/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /<>/src/gromacs/mdlib/tests/settle.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/multisimtest.cpp.o -c /<>/src/programs/mdrun/tests/multisimtest.cpp cd /<>/build/basic-dp/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o -c /<>/src/testutils/tests/refdata_tests.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/replicaexchange.cpp.o -c /<>/src/programs/mdrun/tests/replicaexchange.cpp cd /<>/build/basic-dp/src/gromacs/applied-forces/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/applied-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied-forces-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/applied-forces-test.dir/electricfield.cpp.o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/applied-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 81%] Built target applied-forces-test cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o -c /<>/src/programs/mdrun/tests/domain_decomposition.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /<>/src/testutils/tests/testasserts_tests.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrun-mpi-test.dir/multisim.cpp.o CMakeFiles/mdrun-mpi-test.dir/multisimtest.cpp.o CMakeFiles/mdrun-mpi-test.dir/replicaexchange.cpp.o CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrun_test_objlib.dir/energyreader.cpp.o CMakeFiles/mdrun_test_objlib.dir/mdruncomparisonfixture.cpp.o CMakeFiles/mdrun_test_objlib.dir/moduletest.cpp.o CMakeFiles/mdrun_test_objlib.dir/terminationhelper.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -o ../../../../bin/mdrun-mpi-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /<>/src/gromacs/mdlib/tests/shake.cpp cd /<>/build/basic-dp/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -c /<>/src/testutils/tests/xvgtest_tests.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 81%] Built target mdrun-mpi-test /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/listed-forces/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/listed-forces/tests /<>/build/basic-dp/src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target listed-forces-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/listed-forces/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/bonded.cpp.o -c /<>/src/gromacs/listed-forces/tests/bonded.cpp cd /<>/build/basic-dp/src/testutils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/listed-forces/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /<>/src/gromacs/mdlib/tests/simulationsignal.cpp cd /<>/build/basic-dp/src/gromacs/listed-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed-forces-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/listed-forces-test.dir/bonded.cpp.o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/listed-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 81%] Built target listed-forces-test /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/commandline/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/commandline/tests /<>/build/basic-dp/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake --color= Scanning dependencies of target commandline-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp cd /<>/build/basic-dp/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-test.dir/interactivetest.cpp.o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-test ../../../lib/libtestutils.a ../../../lib/libgromacs_d.so.3.0.0 ../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 82%] Built target testutils-test /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/ewald/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/ewald/tests /<>/build/basic-dp/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake --color= Scanning dependencies of target ewald-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmebsplinetest.cpp cd /<>/build/basic-dp/src/gromacs/mdlib/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp cd /<>/build/basic-dp/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o CMakeFiles/mdlib-test.dir/settle.cpp.o CMakeFiles/mdlib-test.dir/shake.cpp.o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/mdlib-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 83%] Built target mdlib-test /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fft/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/fft/tests /<>/build/basic-dp/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake --color= Scanning dependencies of target fft-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/fft/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/fft.cpp.o -c /<>/src/gromacs/fft/tests/fft.cpp cd /<>/build/basic-dp/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp cd /<>/build/basic-dp/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp cd /<>/build/basic-dp/src/gromacs/fft/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /<>/src/gromacs/ewald/tests/pmegathertest.cpp cd /<>/build/basic-dp/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fft-test.dir/fft.cpp.o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fft-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 84%] Built target fft-test /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gpu_utils/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/gpu_utils/tests /<>/build/basic-dp/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake --color= Scanning dependencies of target gpu_utils-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/gpu_utils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/gputest.cpp.o -c /<>/src/gromacs/gpu_utils/tests/gputest.cpp cd /<>/build/basic-dp/src/gromacs/gpu_utils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /<>/src/gromacs/gpu_utils/tests/hostallocator.cpp cd /<>/build/basic-dp/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineparser.cpp cd /<>/build/basic-dp/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp cd /<>/build/basic-dp/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesolvetest.cpp cd /<>/build/basic-dp/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c /<>/src/gromacs/commandline/tests/pargs.cpp cd /<>/build/basic-dp/src/gromacs/gpu_utils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -c /<>/src/gromacs/gpu_utils/tests/devicetransfers.cpp cd /<>/build/basic-dp/src/gromacs/commandline/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/gpu_utils/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesplinespreadtest.cpp cd /<>/build/basic-dp/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gpu_utils-test.dir/gputest.cpp.o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gpu_utils-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 85%] Built target gpu_utils-test /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/hardware/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/hardware/tests /<>/build/basic-dp/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake --color= Scanning dependencies of target hardware-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/hardware/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /<>/src/gromacs/hardware/tests/hardwaretopology.cpp cd /<>/build/basic-dp/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o CMakeFiles/commandline-test.dir/pargs.cpp.o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o ../../onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/commandline-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 86%] Built target commandline-test /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/math/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/math/tests /<>/build/basic-dp/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake --color= Scanning dependencies of target math-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/math/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/functions.cpp.o -c /<>/src/gromacs/math/tests/functions.cpp cd /<>/build/basic-dp/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /<>/src/gromacs/ewald/tests/pmetestcommon.cpp cd /<>/build/basic-dp/src/gromacs/hardware/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o -c /<>/src/gromacs/ewald/tests/testhardwarecontexts.cpp cd /<>/build/basic-dp/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/hardware-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/math/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/invertmatrix.cpp.o -c /<>/src/gromacs/math/tests/invertmatrix.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 86%] Built target hardware-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/mdrunutility/tests /<>/build/basic-dp/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity.cpp cd /<>/build/basic-dp/src/gromacs/ewald/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/math/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /<>/src/gromacs/math/tests/vectypes.cpp cd /<>/build/basic-dp/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/ewald-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 86%] Built target ewald-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/mdrunutility/tests /<>/build/basic-dp/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-mpi-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity-mpi.cpp cd /<>/build/basic-dp/src/gromacs/math/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/math-test.dir/functions.cpp.o CMakeFiles/math-test.dir/invertmatrix.cpp.o CMakeFiles/math-test.dir/vectypes.cpp.o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/math-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/mdrunutility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 86%] Built target math-test /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/onlinehelp/tests /<>/build/basic-dp/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake --color= Scanning dependencies of target onlinehelp-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpformat.cpp cd /<>/build/basic-dp/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpmanager.cpp cd /<>/build/basic-dp/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpwritercontext.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 86%] Built target mdrunutility-test /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/options/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/options/tests /<>/build/basic-dp/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake --color= Scanning dependencies of target options-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /<>/src/gromacs/options/tests/abstractoptionstorage.cpp cd /<>/build/basic-dp/src/gromacs/onlinehelp/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-mpi-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/random/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/random/tests /<>/build/basic-dp/src/gromacs/random/tests/CMakeFiles/random-test.dir/DependInfo.cmake --color= Scanning dependencies of target random-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -c /<>/src/gromacs/random/tests/exponentialdistribution.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 87%] Built target mdrunutility-mpi-test /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/tables/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/tables/tests /<>/build/basic-dp/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake --color= Scanning dependencies of target table-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/tables/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/splinetable.cpp.o -c /<>/src/gromacs/tables/tests/splinetable.cpp cd /<>/build/basic-dp/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/onlinehelp-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 88%] Built target onlinehelp-test /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/taskassignment/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/taskassignment/tests /<>/build/basic-dp/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake --color= Scanning dependencies of target taskassignment-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/taskassignment/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -c /<>/src/gromacs/taskassignment/tests/usergpuids.cpp cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /<>/src/gromacs/random/tests/gammadistribution.cpp cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /<>/src/gromacs/options/tests/filenameoption.cpp cd /<>/build/basic-dp/src/gromacs/taskassignment/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /<>/src/gromacs/random/tests/normaldistribution.cpp cd /<>/build/basic-dp/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/taskassignment-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 88%] Built target taskassignment-test /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/utility/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/utility/tests /<>/build/basic-dp/src/gromacs/utility/tests/CMakeFiles/utility-test.dir/DependInfo.cmake --color= Scanning dependencies of target utility-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/alignedallocator.cpp.o -c /<>/src/gromacs/utility/tests/alignedallocator.cpp cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -c /<>/src/gromacs/options/tests/filenameoptionmanager.cpp cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/seed.cpp.o -c /<>/src/gromacs/random/tests/seed.cpp cd /<>/build/basic-dp/src/gromacs/tables/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /<>/src/gromacs/random/tests/tabulatednormaldistribution.cpp cd /<>/build/basic-dp/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/table-test.dir/splinetable.cpp.o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/table-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/arrayref.cpp.o -c /<>/src/gromacs/utility/tests/arrayref.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 89%] Built target table-test /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fileio/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/fileio/tests /<>/build/basic-dp/src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/DependInfo.cmake --color= Scanning dependencies of target fileio-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/fileio/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /<>/src/gromacs/fileio/tests/confio.cpp cd /<>/build/basic-dp/src/gromacs/fileio/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/readinp.cpp.o -c /<>/src/gromacs/fileio/tests/readinp.cpp cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/option.cpp.o -c /<>/src/gromacs/options/tests/option.cpp cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/threefry.cpp.o -c /<>/src/gromacs/random/tests/threefry.cpp cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /<>/src/gromacs/options/tests/optionsassigner.cpp cd /<>/build/basic-dp/src/gromacs/fileio/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /<>/src/gromacs/fileio/tests/tngio.cpp cd /<>/build/basic-dp/src/gromacs/fileio/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fileio-test.dir/confio.cpp.o CMakeFiles/fileio-test.dir/readinp.cpp.o CMakeFiles/fileio-test.dir/tngio.cpp.o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fileio-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 89%] Built target fileio-test /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/pulling/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/pulling/tests /<>/build/basic-dp/src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/DependInfo.cmake --color= Scanning dependencies of target pull-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/pulling/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/pull.cpp.o -c /<>/src/gromacs/pulling/tests/pull.cpp cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformintdistribution.cpp cd /<>/build/basic-dp/src/gromacs/pulling/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/pull-test.dir/pull.cpp.o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/pull-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 89%] Built target pull-test /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/depend cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformrealdistribution.cpp make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/awh/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/awh/tests /<>/build/basic-dp/src/gromacs/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake --color= Scanning dependencies of target awh-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/awh/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/bias.cpp.o -c /<>/src/gromacs/awh/tests/bias.cpp cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /<>/src/gromacs/options/tests/repeatingsection.cpp cd /<>/build/basic-dp/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/random-test.dir/exponentialdistribution.cpp.o CMakeFiles/random-test.dir/gammadistribution.cpp.o CMakeFiles/random-test.dir/normaldistribution.cpp.o CMakeFiles/random-test.dir/seed.cpp.o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o CMakeFiles/random-test.dir/threefry.cpp.o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/random-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 90%] Built target random-test /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/simd/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/simd/tests /<>/build/basic-dp/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake --color= Scanning dependencies of target simd-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /<>/src/gromacs/simd/tests/bootstrap_loadstore.cpp cd /<>/build/basic-dp/src/gromacs/awh/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /<>/src/gromacs/awh/tests/biasstate.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/base.cpp.o -c /<>/src/gromacs/simd/tests/base.cpp cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /<>/src/gromacs/options/tests/timeunitmanager.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/data.cpp.o -c /<>/src/gromacs/simd/tests/data.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd.cpp.o -c /<>/src/gromacs/simd/tests/simd.cpp cd /<>/build/basic-dp/src/gromacs/awh/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/grid.cpp.o -c /<>/src/gromacs/awh/tests/grid.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /<>/src/gromacs/utility/tests/bitmask32.cpp cd /<>/build/basic-dp/src/gromacs/awh/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/treesupport.cpp.o -c /<>/src/gromacs/options/tests/treesupport.cpp cd /<>/build/basic-dp/src/gromacs/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/awh-test.dir/bias.cpp.o CMakeFiles/awh-test.dir/biasstate.cpp.o CMakeFiles/awh-test.dir/grid.cpp.o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/awh-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 90%] Built target awh-test /usr/bin/make -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gmxana/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/gmxana/tests /<>/build/basic-dp/src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/DependInfo.cmake --color= Scanning dependencies of target gmxana-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/gmxana/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gmxana/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o -c /<>/src/gromacs/gmxana/tests/gmx_traj.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask64.cpp.o -c /<>/src/gromacs/utility/tests/bitmask64.cpp cd /<>/build/basic-dp/src/gromacs/gmxana/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gmxana/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxana-test.dir/gmx_trjconv.cpp.o -c /<>/src/gromacs/gmxana/tests/gmx_trjconv.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint_util.cpp cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/gmxana/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gmxana/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o CMakeFiles/options-test.dir/filenameoption.cpp.o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o CMakeFiles/options-test.dir/option.cpp.o CMakeFiles/options-test.dir/optionsassigner.cpp.o CMakeFiles/options-test.dir/repeatingsection.cpp.o CMakeFiles/options-test.dir/timeunitmanager.cpp.o CMakeFiles/options-test.dir/treesupport.cpp.o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/options-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 91%] Built target options-test /usr/bin/make -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gmxpreprocess/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/gmxpreprocess/tests /<>/build/basic-dp/src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/DependInfo.cmake --color= Scanning dependencies of target gmxpreprocess-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -c /<>/src/gromacs/gmxpreprocess/tests/genconf.cpp cd /<>/build/basic-dp/src/gromacs/gmxana/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxana-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o CMakeFiles/gmxana-test.dir/gmx_trjconv.cpp.o CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gmxana-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /<>/src/gromacs/utility/tests/bitmask128.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 91%] Built target gmxana-test /usr/bin/make -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/correlationfunctions/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/correlationfunctions/tests /<>/build/basic-dp/src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/DependInfo.cmake --color= Scanning dependencies of target correlations-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/autocorr.cpp.o -c /<>/src/gromacs/correlationfunctions/tests/autocorr.cpp cd /<>/build/basic-dp/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/insert-molecules.cpp.o -c /<>/src/gromacs/gmxpreprocess/tests/insert-molecules.cpp cd /<>/build/basic-dp/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -c /<>/src/gromacs/correlationfunctions/tests/manyautocorrelation.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd_vector_operations.cpp cd /<>/build/basic-dp/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -c /<>/src/gromacs/gmxpreprocess/tests/readir.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreeserializer.cpp cd /<>/build/basic-dp/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/correlationdataset.cpp.o -c /<>/src/gromacs/correlationfunctions/tests/correlationdataset.cpp cd /<>/build/basic-dp/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/expfit.cpp.o -c /<>/src/gromacs/correlationfunctions/tests/expfit.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /<>/src/gromacs/simd/tests/simd_math.cpp cd /<>/build/basic-dp/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -c /<>/src/gromacs/gmxpreprocess/tests/solvate.cpp cd /<>/build/basic-dp/src/gromacs/gmxpreprocess/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/correlationfunctions/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/correlationfunctions/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/correlations-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/correlations-test.dir/autocorr.cpp.o CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o CMakeFiles/correlations-test.dir/correlationdataset.cpp.o CMakeFiles/correlations-test.dir/expfit.cpp.o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/correlations-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 92%] Built target correlations-test /usr/bin/make -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/analysisdata/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/analysisdata/tests /<>/build/basic-dp/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/DependInfo.cmake --color= Scanning dependencies of target analysisdata-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -c /<>/src/gromacs/analysisdata/tests/analysisdata.cpp cd /<>/build/basic-dp/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxpreprocess-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o CMakeFiles/gmxpreprocess-test.dir/insert-molecules.cpp.o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gmxpreprocess-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 92%] Built target gmxpreprocess-test /usr/bin/make -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/selection/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/selection/tests /<>/build/basic-dp/src/gromacs/selection/tests/CMakeFiles/selection-test.dir/DependInfo.cmake --color= Scanning dependencies of target selection-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/indexutil.cpp.o -c /<>/src/gromacs/selection/tests/indexutil.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreetransform.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_memory.cpp.o -c /<>/src/gromacs/simd/tests/simd_memory.cpp cd /<>/build/basic-dp/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/nbsearch.cpp.o -c /<>/src/gromacs/selection/tests/nbsearch.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/logger.cpp.o -c /<>/src/gromacs/utility/tests/logger.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_integer.cpp.o -c /<>/src/gromacs/simd/tests/simd_integer.cpp cd /<>/build/basic-dp/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/poscalc.cpp.o -c /<>/src/gromacs/selection/tests/poscalc.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/mutex.cpp.o -c /<>/src/gromacs/utility/tests/mutex.cpp cd /<>/build/basic-dp/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -c /<>/src/gromacs/analysisdata/tests/arraydata.cpp cd /<>/build/basic-dp/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/average.cpp.o -c /<>/src/gromacs/analysisdata/tests/average.cpp cd /<>/build/basic-dp/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/selectioncollection.cpp.o -c /<>/src/gromacs/selection/tests/selectioncollection.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /<>/src/gromacs/simd/tests/simd4.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd4_floatingpoint.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/path.cpp.o -c /<>/src/gromacs/utility/tests/path.cpp cd /<>/build/basic-dp/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/histogram.cpp.o -c /<>/src/gromacs/analysisdata/tests/histogram.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd4_vector_operations.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /<>/src/gromacs/utility/tests/stringutil.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /<>/src/gromacs/simd/tests/simd4_math.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /<>/src/gromacs/simd/tests/scalar.cpp cd /<>/build/basic-dp/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -c /<>/src/gromacs/analysisdata/tests/lifetime.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /<>/src/gromacs/simd/tests/scalar_util.cpp cd /<>/build/basic-dp/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/selectionoption.cpp.o -c /<>/src/gromacs/selection/tests/selectionoption.cpp cd /<>/build/basic-dp/src/gromacs/analysisdata/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/analysisdata/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /<>/src/gromacs/utility/tests/textreader.cpp cd /<>/build/basic-dp/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o CMakeFiles/analysisdata-test.dir/arraydata.cpp.o CMakeFiles/analysisdata-test.dir/average.cpp.o CMakeFiles/analysisdata-test.dir/histogram.cpp.o CMakeFiles/analysisdata-test.dir/lifetime.cpp.o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -o ../../../../bin/analysisdata-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 92%] Built target analysisdata-test /usr/bin/make -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/trajectoryanalysis/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/DependInfo.cmake --color= Scanning dependencies of target trajectoryanalysis-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/moduletest.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /<>/src/gromacs/simd/tests/scalar_math.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/clustsize.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o CMakeFiles/simd-test.dir/base.cpp.o CMakeFiles/simd-test.dir/data.cpp.o CMakeFiles/simd-test.dir/simd.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd_math.cpp.o CMakeFiles/simd-test.dir/simd_memory.cpp.o CMakeFiles/simd-test.dir/simd_integer.cpp.o CMakeFiles/simd-test.dir/simd4.cpp.o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd4_math.cpp.o CMakeFiles/simd-test.dir/scalar.cpp.o CMakeFiles/simd-test.dir/scalar_util.cpp.o CMakeFiles/simd-test.dir/scalar_math.cpp.o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/simd-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /<>/src/gromacs/utility/tests/textwriter.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 93%] Built target simd-test /usr/bin/make -f src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build.make src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/energyanalysis/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/energyanalysis/tests /<>/build/basic-dp/src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/DependInfo.cmake --color= Scanning dependencies of target energyanalysis-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build.make src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/energyanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/energyanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/energyanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o -c /<>/src/gromacs/energyanalysis/tests/legacyenergy.cpp cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /<>/src/gromacs/utility/tests/typetraits.cpp cd /<>/build/basic-dp/src/gromacs/energyanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/energyanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/energyanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/toputils.cpp.o -c /<>/src/gromacs/selection/tests/toputils.cpp cd /<>/build/basic-dp/src/gromacs/energyanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/energyanalysis-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/energyanalysis-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 93%] Built target energyanalysis-test /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/compat/tests /<>/build/basic-dp /<>/build/basic-dp/src/gromacs/compat/tests /<>/build/basic-dp/src/gromacs/compat/tests/CMakeFiles/compat-test.dir/DependInfo.cmake --color= Scanning dependencies of target compat-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/gromacs/selection/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/selection/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/compat/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/make_unique.cpp.o -c /<>/src/gromacs/compat/tests/make_unique.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/angle.cpp cd /<>/build/basic-dp/src/gromacs/selection/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/selection-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/selection-test.dir/indexutil.cpp.o CMakeFiles/selection-test.dir/nbsearch.cpp.o CMakeFiles/selection-test.dir/poscalc.cpp.o CMakeFiles/selection-test.dir/selectioncollection.cpp.o CMakeFiles/selection-test.dir/selectionoption.cpp.o CMakeFiles/selection-test.dir/toputils.cpp.o CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/selection-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/utility-test.dir/alignedallocator.cpp.o CMakeFiles/utility-test.dir/arrayref.cpp.o CMakeFiles/utility-test.dir/bitmask32.cpp.o CMakeFiles/utility-test.dir/bitmask64.cpp.o CMakeFiles/utility-test.dir/bitmask128.cpp.o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o CMakeFiles/utility-test.dir/logger.cpp.o CMakeFiles/utility-test.dir/mutex.cpp.o CMakeFiles/utility-test.dir/path.cpp.o CMakeFiles/utility-test.dir/stringutil.cpp.o CMakeFiles/utility-test.dir/textreader.cpp.o CMakeFiles/utility-test.dir/textwriter.cpp.o CMakeFiles/utility-test.dir/typetraits.cpp.o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/utility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 94%] Built target selection-test /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic-dp /<>/build/basic-dp/src/programs/mdrun/tests /<>/build/basic-dp/src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrun-test make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -c /<>/src/programs/mdrun/tests/tabulated_bonded_interactions.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 96%] Built target utility-test cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/grompp.cpp.o -c /<>/src/programs/mdrun/tests/grompp.cpp cd /<>/build/basic-dp/src/gromacs/compat/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/distance.cpp cd /<>/build/basic-dp/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/compat-test.dir/make_unique.cpp.o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/compat-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/freevolume.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/initialconstraints.cpp.o -c /<>/src/programs/mdrun/tests/initialconstraints.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/rerun.cpp.o -c /<>/src/programs/mdrun/tests/rerun.cpp make[4]: Leaving directory '/<>/build/basic-dp' [ 96%] Built target compat-test cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/pairdist.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/trajectory_writing.cpp.o -c /<>/src/programs/mdrun/tests/trajectory_writing.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/rdf.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/trajectoryreader.cpp.o -c /<>/src/programs/mdrun/tests/trajectoryreader.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/sasa.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/select.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/compressed_x_output.cpp.o -c /<>/src/programs/mdrun/tests/compressed_x_output.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/surfacearea.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/trajectory.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -c /<>/src/programs/mdrun/tests/swapcoords.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/interactiveMD.cpp.o -c /<>/src/programs/mdrun/tests/interactiveMD.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -c /<>/src/gromacs/trajectoryanalysis/tests/unionfind.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/termination.cpp.o -c /<>/src/programs/mdrun/tests/termination.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/pmetest.cpp.o -c /<>/src/programs/mdrun/tests/pmetest.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/programs/mdrun/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/c++ -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/basic-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/basic-dp/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o CMakeFiles/mdrun-test.dir/grompp.cpp.o CMakeFiles/mdrun-test.dir/initialconstraints.cpp.o CMakeFiles/mdrun-test.dir/rerun.cpp.o CMakeFiles/mdrun-test.dir/trajectory_writing.cpp.o CMakeFiles/mdrun-test.dir/trajectoryreader.cpp.o CMakeFiles/mdrun-test.dir/compressed_x_output.cpp.o CMakeFiles/mdrun-test.dir/swapcoords.cpp.o CMakeFiles/mdrun-test.dir/interactiveMD.cpp.o CMakeFiles/mdrun-test.dir/termination.cpp.o CMakeFiles/mdrun-test.dir/pmetest.cpp.o CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrun_test_objlib.dir/energyreader.cpp.o CMakeFiles/mdrun_test_objlib.dir/mdruncomparisonfixture.cpp.o CMakeFiles/mdrun_test_objlib.dir/moduletest.cpp.o CMakeFiles/mdrun_test_objlib.dir/terminationhelper.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -o ../../../../bin/mdrun-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [ 98%] Built target mdrun-test cd /<>/build/basic-dp/src/gromacs/trajectoryanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryanalysis-test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o ../../analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o ../../analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -o ../../../../bin/trajectoryanalysis-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.3.0.0 ../../../../lib/libgmock.a -lpthread -fopenmp -lm make[4]: Leaving directory '/<>/build/basic-dp' [100%] Built target trajectoryanalysis-test /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/basic-dp /<>/build/basic-dp /<>/build/basic-dp/CMakeFiles/tests.dir/DependInfo.cmake --color= Scanning dependencies of target tests make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build make[4]: Entering directory '/<>/build/basic-dp' make[4]: Nothing to be done for 'CMakeFiles/tests.dir/build'. make[4]: Leaving directory '/<>/build/basic-dp' [100%] Built target tests /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/basic-dp /<>/build/basic-dp /<>/build/basic-dp/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake --color= Scanning dependencies of target run-ctest-nophys make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build make[4]: Entering directory '/<>/build/basic-dp' /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /<>/build/basic-dp Start 1: TestUtilsUnitTests 1/33 Test #1: TestUtilsUnitTests ............... Passed 0.15 sec Start 2: TestUtilsMpiUnitTests 2/33 Test #2: TestUtilsMpiUnitTests ............ Passed 0.04 sec Start 3: MdlibUnitTest 3/33 Test #3: MdlibUnitTest .................... Passed 0.03 sec Start 4: AppliedForcesUnitTest 4/33 Test #4: AppliedForcesUnitTest ............ Passed 0.05 sec Start 5: ListedForcesTest 5/33 Test #5: ListedForcesTest ................. Passed 0.12 sec Start 6: CommandLineUnitTests 6/33 Test #6: CommandLineUnitTests ............. Passed 0.08 sec Start 7: EwaldUnitTests 7/33 Test #7: EwaldUnitTests ................... Passed 1.36 sec Start 8: FFTUnitTests 8/33 Test #8: FFTUnitTests ..................... Passed 0.18 sec Start 9: GpuUtilsUnitTests 9/33 Test #9: GpuUtilsUnitTests ................ Passed 0.09 sec Start 10: HardwareUnitTests 10/33 Test #10: HardwareUnitTests ................ Passed 0.11 sec Start 11: MathUnitTests 11/33 Test #11: MathUnitTests .................... Passed 0.05 sec Start 12: MdrunUtilityUnitTests 12/33 Test #12: MdrunUtilityUnitTests ............ Passed 0.10 sec Start 13: MdrunUtilityMpiUnitTests 13/33 Test #13: MdrunUtilityMpiUnitTests ......... Passed 3.28 sec Start 14: OnlineHelpUnitTests 14/33 Test #14: OnlineHelpUnitTests .............. Passed 0.05 sec Start 15: OptionsUnitTests 15/33 Test #15: OptionsUnitTests ................. Passed 0.09 sec Start 16: RandomUnitTests 16/33 Test #16: RandomUnitTests .................. Passed 0.08 sec Start 17: TableUnitTests 17/33 Test #17: TableUnitTests ................... Passed 1.21 sec Start 18: TaskAssignmentUnitTests 18/33 Test #18: TaskAssignmentUnitTests .......... Passed 0.03 sec Start 19: UtilityUnitTests 19/33 Test #19: UtilityUnitTests ................. Passed 0.15 sec Start 20: FileIOTests 20/33 Test #20: FileIOTests ...................... Passed 0.05 sec Start 21: PullTest 21/33 Test #21: PullTest ......................... Passed 0.04 sec Start 22: AwhTest 22/33 Test #22: AwhTest .......................... Passed 0.06 sec Start 23: SimdUnitTests 23/33 Test #23: SimdUnitTests .................... Passed 0.24 sec Start 24: GmxAnaTest 24/33 Test #24: GmxAnaTest ....................... Passed 0.26 sec Start 25: GmxPreprocessTests 25/33 Test #25: GmxPreprocessTests ............... Passed 0.77 sec Start 26: CorrelationsTest 26/33 Test #26: CorrelationsTest ................. Passed 0.70 sec Start 27: AnalysisDataUnitTests 27/33 Test #27: AnalysisDataUnitTests ............ Passed 0.27 sec Start 28: SelectionUnitTests 28/33 Test #28: SelectionUnitTests ............... Passed 0.74 sec Start 29: TrajectoryAnalysisUnitTests 29/33 Test #29: TrajectoryAnalysisUnitTests ...... Passed 1.92 sec Start 30: EnergyAnalysisUnitTests 30/33 Test #30: EnergyAnalysisUnitTests .......... Passed 0.30 sec Start 31: CompatibilityHelpersTests 31/33 Test #31: CompatibilityHelpersTests ........ Passed 0.03 sec Start 32: MdrunTests 32/33 Test #32: MdrunTests ....................... Passed 6.77 sec Start 33: MdrunMpiTests 33/33 Test #33: MdrunMpiTests .................... Passed 1.12 sec 100% tests passed, 0 tests failed out of 33 Label Time Summary: GTest = 20.52 sec (33 tests) IntegrationTest = 8.15 sec (3 tests) MpiTest = 4.44 sec (3 tests) UnitTest = 12.37 sec (30 tests) Total Test time (real) = 20.70 sec make[4]: Leaving directory '/<>/build/basic-dp' [100%] Built target run-ctest-nophys /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/tests /<>/build/basic-dp /<>/build/basic-dp/tests /<>/build/basic-dp/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake --color= Scanning dependencies of target missing-tests-notice make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. make[4]: Leaving directory '/<>/build/basic-dp' [100%] Built target missing-tests-notice /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend make[4]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/basic-dp /<>/build/basic-dp /<>/build/basic-dp/CMakeFiles/check.dir/DependInfo.cmake --color= Scanning dependencies of target check make[4]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build make[4]: Entering directory '/<>/build/basic-dp' make[4]: Nothing to be done for 'CMakeFiles/check.dir/build'. make[4]: Leaving directory '/<>/build/basic-dp' [100%] Built target check make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/cmake -E cmake_progress_start /<>/build/basic-dp/CMakeFiles 0 make[2]: Leaving directory '/<>/build/basic-dp' make[1]: Leaving directory '/<>/build/basic-dp' touch build-basic dh_testdir /usr/bin/make -j4 -C build/mpich make[1]: Entering directory '/<>/build/mpich' /usr/bin/cmake -H/<> -B/<>/build/mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/mpich/CMakeFiles /<>/build/mpich/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich /<>/build/mpich/src/gromacs /<>/build/mpich/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/mpich /<>/build/mpich/src/programs /<>/build/mpich/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= Scanning dependencies of target tng_io_obj make[3]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwlzh.c.o -c /<>/src/external/tng_io/src/compression/bwlzh.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwt.c.o -c /<>/src/external/tng_io/src/compression/bwt.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/coder.c.o -c /<>/src/external/tng_io/src/compression/coder.c Scanning dependencies of target mdrun_objlib make[3]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o -c /<>/src/programs/mdrun/md.cpp cd /<>/build/mpich/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -c /<>/src/programs/mdrun/mdrun.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/dict.c.o -c /<>/src/external/tng_io/src/compression/dict.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/fixpoint.c.o -c /<>/src/external/tng_io/src/compression/fixpoint.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffman.c.o -c /<>/src/external/tng_io/src/compression/huffman.c cd /<>/build/mpich/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o -c /<>/src/programs/mdrun/membed.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffmem.c.o -c /<>/src/external/tng_io/src/compression/huffmem.c cd /<>/build/mpich/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o -c /<>/src/programs/mdrun/repl_ex.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/lz77.c.o -c /<>/src/external/tng_io/src/compression/lz77.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/merge_sort.c.o -c /<>/src/external/tng_io/src/compression/merge_sort.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/mtf.c.o -c /<>/src/external/tng_io/src/compression/mtf.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/rle.c.o -c /<>/src/external/tng_io/src/compression/rle.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/tng_compress.c.o -c /<>/src/external/tng_io/src/compression/tng_compress.c cd /<>/build/mpich/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -c /<>/src/programs/mdrun/runner.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/vals16.c.o -c /<>/src/external/tng_io/src/compression/vals16.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/warnmalloc.c.o -c /<>/src/external/tng_io/src/compression/warnmalloc.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/widemuldiv.c.o -c /<>/src/external/tng_io/src/compression/widemuldiv.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc2.c.o -c /<>/src/external/tng_io/src/compression/xtc2.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc3.c.o -c /<>/src/external/tng_io/src/compression/xtc3.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/tng_io.c.o -c /<>/src/external/tng_io/src/lib/tng_io.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/md5.c.o -c /<>/src/external/tng_io/src/lib/md5.c make[3]: Leaving directory '/<>/build/mpich' [ 1%] Built target mdrun_objlib make[3]: Leaving directory '/<>/build/mpich' [ 5%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/<>/build/mpich/VersionInfo.cmake -D VERSION_CMAKEIN=/<>/src/gromacs/utility/baseversion-gen.c.cmakein -D VERSION_OUT=utility/baseversion-gen.c -P /<>/cmake/gmxConfigureVersionInfo.cmake cd /<>/build/mpich/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.c cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich /<>/build/mpich/src/gromacs /<>/build/mpich/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= Scanning dependencies of target libgromacs make[3]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/bonded.cpp.o -c /<>/src/gromacs/listed-forces/bonded.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/disre.cpp.o -c /<>/src/gromacs/listed-forces/disre.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-forces.cpp.o -c /<>/src/gromacs/listed-forces/listed-forces.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-internal.cpp.o -c /<>/src/gromacs/listed-forces/listed-internal.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-gather.cpp.o -c /<>/src/gromacs/ewald/pme-gather.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-gpu-internal.cpp.o -c 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-I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-only.cpp.o -c /<>/src/gromacs/ewald/pme-only.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-pp.cpp.o -c /<>/src/gromacs/ewald/pme-pp.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-spread.cpp.o -c /<>/src/gromacs/ewald/pme-spread.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme.cpp.o -c /<>/src/gromacs/ewald/pme.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/linearalgebra/eigensolver.cpp.o -c /<>/src/gromacs/linearalgebra/eigensolver.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/linearalgebra/gmx_arpack.cpp.o -c 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/math/3dtransforms.cpp.o -c /<>/src/gromacs/math/3dtransforms.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/math/do_fit.cpp.o -c /<>/src/gromacs/math/do_fit.cpp cd /<>/build/mpich/src/gromacs && 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/<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/ifunc.cpp.o -c /<>/src/gromacs/topology/ifunc.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/index.cpp.o -c /<>/src/gromacs/topology/index.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/invblock.cpp.o -c /<>/src/gromacs/topology/invblock.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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-I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/symtab.cpp.o -c /<>/src/gromacs/topology/symtab.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/topology.cpp.o -c /<>/src/gromacs/topology/topology.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -c /<>/src/gromacs/utility/baseversion.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/binaryinformation.cpp.o -c /<>/src/gromacs/utility/binaryinformation.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/compare.cpp.o -c /<>/src/gromacs/utility/compare.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/coolstuff.cpp.o -c /<>/src/gromacs/utility/coolstuff.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/cstringutil.cpp.o -c /<>/src/gromacs/utility/cstringutil.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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-I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/errorcodes.cpp.o -c /<>/src/gromacs/utility/errorcodes.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/errorformat.cpp.o -c /<>/src/gromacs/utility/errorformat.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich 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-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/inmemoryserializer.cpp.o -c /<>/src/gromacs/utility/inmemoryserializer.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/int64_to_int.cpp.o -c /<>/src/gromacs/utility/int64_to_int.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o -c /<>/src/gromacs/utility/keyvaluetree.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/logger.cpp.o -c /<>/src/gromacs/utility/logger.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/loggerbuilder.cpp.o -c /<>/src/gromacs/utility/loggerbuilder.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/messagestringcollector.cpp.o -c /<>/src/gromacs/utility/messagestringcollector.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/pleasecite.cpp.o -c /<>/src/gromacs/utility/pleasecite.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/programcontext.cpp.o -c /<>/src/gromacs/utility/programcontext.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/qsort_threadsafe.cpp.o -c /<>/src/gromacs/utility/qsort_threadsafe.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/smalloc.cpp.o -c /<>/src/gromacs/utility/smalloc.cpp cd 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-O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/stringutil.cpp.o -c /<>/src/gromacs/utility/stringutil.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o -c /<>/src/gromacs/utility/sysinfo.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/textreader.cpp.o -c /<>/src/gromacs/utility/textreader.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/textwriter.cpp.o -c /<>/src/gromacs/utility/textwriter.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/txtdump.cpp.o -c /<>/src/gromacs/utility/txtdump.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -c /<>/src/gromacs/fileio/gmxfio.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -c /<>/src/gromacs/fileio/groio.cpp cd /<>/build/mpich/src/gromacs && 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/pdbio.cpp.o -c /<>/src/gromacs/fileio/pdbio.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/readinp.cpp.o -c /<>/src/gromacs/fileio/readinp.cpp cd /<>/build/mpich/src/gromacs && 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/warninp.cpp.o -c /<>/src/gromacs/fileio/warninp.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/writeps.cpp.o -c /<>/src/gromacs/fileio/writeps.cpp cd /<>/build/mpich/src/gromacs && 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/biasparams.cpp.o -c /<>/src/gromacs/awh/biasparams.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/biassharing.cpp.o -c /<>/src/gromacs/awh/biassharing.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/biasstate.cpp.o -c /<>/src/gromacs/awh/biasstate.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/biaswriter.cpp.o -c /<>/src/gromacs/awh/biaswriter.cpp cd /<>/build/mpich/src/gromacs && 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-O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/correlationtensor.cpp.o -c /<>/src/gromacs/awh/correlationtensor.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/grid.cpp.o -c /<>/src/gromacs/awh/grid.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/histogramsize.cpp.o -c /<>/src/gromacs/awh/histogramsize.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/pointstate.cpp.o -c /<>/src/gromacs/awh/pointstate.cpp 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-I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/conformation-utilities.cpp.o -c /<>/src/gromacs/gmxlib/conformation-utilities.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/network.cpp.o -c /<>/src/gromacs/gmxlib/network.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nrnb.cpp.o -c /<>/src/gromacs/gmxlib/nrnb.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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-DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast 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-I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_cpu.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_cpu.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/broadcaststructs.cpp.o -c /<>/src/gromacs/mdlib/broadcaststructs.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/calc_verletbuf.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o -c /<>/src/gromacs/mdlib/calcmu.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calcvir.cpp.o -c /<>/src/gromacs/mdlib/calcvir.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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-I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -c /<>/src/gromacs/mdlib/constr.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/coupling.cpp.o -c /<>/src/gromacs/mdlib/coupling.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/csettle.cpp.o -c /<>/src/gromacs/mdlib/csettle.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/ebin.cpp.o -c /<>/src/gromacs/mdlib/ebin.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/expanded.cpp.o -c /<>/src/gromacs/mdlib/expanded.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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-I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/genborn.cpp.o -c /<>/src/gromacs/mdlib/genborn.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/genborn_allvsall.cpp.o -c /<>/src/gromacs/mdlib/genborn_allvsall.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -c /<>/src/gromacs/mdlib/md_support.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o -c /<>/src/gromacs/mdlib/mdatoms.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdebin.cpp.o -c /<>/src/gromacs/mdlib/mdebin.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o -c /<>/src/gromacs/mdlib/mdebin_bar.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_mopac.cpp.o -c /<>/src/gromacs/mdlib/qm_mopac.cpp cd /<>/build/mpich/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/qm_orca.cpp.o -c /<>/src/gromacs/mdlib/qm_orca.cpp cd /<>/build/mpich/src/gromacs && 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CMakeFiles/libgromacs.dir/fft/parallel_3dfft.cpp.o CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o CMakeFiles/libgromacs.dir/gpu_utils/gpu_utils.cpp.o CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o CMakeFiles/libgromacs.dir/hardware/detecthardware.cpp.o CMakeFiles/libgromacs.dir/hardware/gpu_hw_info.cpp.o CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o CMakeFiles/libgromacs.dir/hardware/identifyavx512fmaunits.cpp.o CMakeFiles/libgromacs.dir/mdrunutility/handlerestart.cpp.o CMakeFiles/libgromacs.dir/mdrunutility/mdmodules.cpp.o CMakeFiles/libgromacs.dir/mdrunutility/threadaffinity.cpp.o CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o CMakeFiles/libgromacs.dir/options/abstractsection.cpp.o CMakeFiles/libgromacs.dir/options/basicoptions.cpp.o CMakeFiles/libgromacs.dir/options/behaviorcollection.cpp.o CMakeFiles/libgromacs.dir/options/filenameoption.cpp.o CMakeFiles/libgromacs.dir/options/filenameoptionmanager.cpp.o CMakeFiles/libgromacs.dir/options/options.cpp.o CMakeFiles/libgromacs.dir/options/optionsassigner.cpp.o CMakeFiles/libgromacs.dir/options/optionsection.cpp.o CMakeFiles/libgromacs.dir/options/optionsvisitor.cpp.o CMakeFiles/libgromacs.dir/options/timeunitmanager.cpp.o CMakeFiles/libgromacs.dir/options/treesupport.cpp.o CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o CMakeFiles/libgromacs.dir/trajectory/trajectoryframe.cpp.o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/errhandler.c.o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/tmpi_malloc.c.o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/atomic.c.o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/lock.c.o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/pthreads.c.o CMakeFiles/libgromacs.dir/__/external/thread_mpi/src/system_error.cpp.o CMakeFiles/libgromacs.dir/__/external/lmfit/lmmin.cpp.o CMakeFiles/libgromacs.dir/utility/baseversion-gen.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwlzh.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwt.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/coder.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/dict.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/fixpoint.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffman.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffmem.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/lz77.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/merge_sort.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/mtf.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/rle.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/tng_compress.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/vals16.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/warnmalloc.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/widemuldiv.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc2.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc3.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/tng_io.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/md5.c.o /usr/bin/ranlib ../../lib/libgromacs_mdrun_mpi.mpich.a make[3]: Leaving directory '/<>/build/mpich' [100%] Built target libgromacs /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/depend make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/mpich /<>/build/mpich/src/programs /<>/build/mpich/src/programs/CMakeFiles/mdrun.dir/DependInfo.cmake --color= Scanning dependencies of target mdrun make[3]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/build make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/mdrun.dir/mdrun_main.cpp.o -c /<>/src/programs/mdrun_main.cpp cd /<>/build/mpich/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrun.dir/mdrun_main.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -o ../../bin/mdrun_mpi.mpich ../../lib/libgromacs_mdrun_mpi.mpich.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lpthread -lm make[3]: Leaving directory '/<>/build/mpich' [100%] Built target mdrun make[2]: Leaving directory '/<>/build/mpich' /usr/bin/cmake -E cmake_progress_start /<>/build/mpich/CMakeFiles 0 make[1]: Leaving directory '/<>/build/mpich' /usr/bin/make -j4 -C build/mpich-dp make[1]: Entering directory '/<>/build/mpich-dp' /usr/bin/cmake -H/<> -B/<>/build/mpich-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/mpich-dp/CMakeFiles /<>/build/mpich-dp/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/mpich-dp /<>/build/mpich-dp/src/programs /<>/build/mpich-dp/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs /<>/build/mpich-dp/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= Scanning dependencies of target tng_io_obj make[3]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwlzh.c.o -c /<>/src/external/tng_io/src/compression/bwlzh.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwt.c.o -c /<>/src/external/tng_io/src/compression/bwt.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/coder.c.o -c /<>/src/external/tng_io/src/compression/coder.c Scanning dependencies of target mdrun_objlib make[3]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o -c /<>/src/programs/mdrun/md.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/dict.c.o -c /<>/src/external/tng_io/src/compression/dict.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/fixpoint.c.o -c /<>/src/external/tng_io/src/compression/fixpoint.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffman.c.o -c /<>/src/external/tng_io/src/compression/huffman.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffmem.c.o -c /<>/src/external/tng_io/src/compression/huffmem.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/lz77.c.o -c /<>/src/external/tng_io/src/compression/lz77.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/merge_sort.c.o -c /<>/src/external/tng_io/src/compression/merge_sort.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/mtf.c.o -c /<>/src/external/tng_io/src/compression/mtf.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/rle.c.o -c /<>/src/external/tng_io/src/compression/rle.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/tng_compress.c.o -c /<>/src/external/tng_io/src/compression/tng_compress.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/vals16.c.o -c /<>/src/external/tng_io/src/compression/vals16.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/warnmalloc.c.o -c /<>/src/external/tng_io/src/compression/warnmalloc.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/widemuldiv.c.o -c /<>/src/external/tng_io/src/compression/widemuldiv.c cd /<>/build/mpich-dp/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -c /<>/src/programs/mdrun/mdrun.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc2.c.o -c /<>/src/external/tng_io/src/compression/xtc2.c cd /<>/build/mpich-dp/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o -c /<>/src/programs/mdrun/membed.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc3.c.o -c /<>/src/external/tng_io/src/compression/xtc3.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/tng_io.c.o -c /<>/src/external/tng_io/src/lib/tng_io.c cd /<>/build/mpich-dp/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o -c /<>/src/programs/mdrun/repl_ex.cpp cd /<>/build/mpich-dp/src/programs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -c /<>/src/programs/mdrun/runner.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/md5.c.o -c /<>/src/external/tng_io/src/lib/md5.c make[3]: Leaving directory '/<>/build/mpich-dp' [ 1%] Built target mdrun_objlib make[3]: Leaving directory '/<>/build/mpich-dp' [ 5%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/<>/build/mpich-dp/VersionInfo.cmake -D VERSION_CMAKEIN=/<>/src/gromacs/utility/baseversion-gen.c.cmakein -D VERSION_OUT=utility/baseversion-gen.c -P /<>/cmake/gmxConfigureVersionInfo.cmake cd /<>/build/mpich-dp/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.c cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs /<>/build/mpich-dp/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= Scanning dependencies of target libgromacs make[3]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/bonded.cpp.o -c /<>/src/gromacs/listed-forces/bonded.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/disre.cpp.o -c /<>/src/gromacs/listed-forces/disre.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-forces.cpp.o -c /<>/src/gromacs/listed-forces/listed-forces.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-internal.cpp.o -c /<>/src/gromacs/listed-forces/listed-internal.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/manage-threading.cpp.o -c /<>/src/gromacs/listed-forces/manage-threading.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/orires.cpp.o -c /<>/src/gromacs/listed-forces/orires.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/pairs.cpp.o -c /<>/src/gromacs/listed-forces/pairs.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/position-restraints.cpp.o -c /<>/src/gromacs/listed-forces/position-restraints.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/restcbt.cpp.o -c /<>/src/gromacs/listed-forces/restcbt.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpcontext.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpmodule.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpwriter.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineinit.cpp.o -c /<>/src/gromacs/commandline/cmdlineinit.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinemodule.cpp.o -c /<>/src/gromacs/commandline/cmdlinemodule.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/cmdlinemodulemanager.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/long-range-correction.cpp.o -c /<>/src/gromacs/ewald/long-range-correction.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-gather.cpp.o 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-I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -c /<>/src/gromacs/utility/baseversion.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/binaryinformation.cpp.o -c /<>/src/gromacs/utility/binaryinformation.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/compare.cpp.o -c /<>/src/gromacs/utility/compare.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops 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-I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/datafilefinder.cpp.o -c /<>/src/gromacs/utility/datafilefinder.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/directoryenumerator.cpp.o -c /<>/src/gromacs/utility/directoryenumerator.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/errorcodes.cpp.o -c /<>/src/gromacs/utility/errorcodes.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops 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-I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/fatalerror.cpp.o -c /<>/src/gromacs/utility/fatalerror.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/fileredirector.cpp.o -c /<>/src/gromacs/utility/fileredirector.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/filestream.cpp.o -c /<>/src/gromacs/utility/filestream.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/gmxomp.cpp.o -c /<>/src/gromacs/utility/gmxomp.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/gmxregex.cpp.o -c /<>/src/gromacs/utility/gmxregex.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/ikeyvaluetreeerror.cpp.o -c /<>/src/gromacs/utility/ikeyvaluetreeerror.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/init.cpp.o -c /<>/src/gromacs/utility/init.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/inmemoryserializer.cpp.o -c /<>/src/gromacs/utility/inmemoryserializer.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/int64_to_int.cpp.o -c /<>/src/gromacs/utility/int64_to_int.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o -c /<>/src/gromacs/utility/keyvaluetree.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/keyvaluetreeserializer.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetreetransform.cpp.o -c /<>/src/gromacs/utility/keyvaluetreetransform.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/logger.cpp.o -c /<>/src/gromacs/utility/logger.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/loggerbuilder.cpp.o -c /<>/src/gromacs/utility/loggerbuilder.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/messagestringcollector.cpp.o -c /<>/src/gromacs/utility/messagestringcollector.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/niceheader.cpp.o -c /<>/src/gromacs/utility/niceheader.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/path.cpp.o -c /<>/src/gromacs/utility/path.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/pleasecite.cpp.o -c /<>/src/gromacs/utility/pleasecite.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/programcontext.cpp.o -c /<>/src/gromacs/utility/programcontext.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/qsort_threadsafe.cpp.o -c /<>/src/gromacs/utility/qsort_threadsafe.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/smalloc.cpp.o -c /<>/src/gromacs/utility/smalloc.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/strconvert.cpp.o -c /<>/src/gromacs/utility/strconvert.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/strdb.cpp.o -c /<>/src/gromacs/utility/strdb.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 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-I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o -c /<>/src/gromacs/utility/sysinfo.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/textreader.cpp.o -c /<>/src/gromacs/utility/textreader.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/textwriter.cpp.o -c /<>/src/gromacs/utility/textwriter.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops 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-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/checkpoint.cpp.o -c /<>/src/gromacs/fileio/checkpoint.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/confio.cpp.o -c /<>/src/gromacs/fileio/confio.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/enxio.cpp.o -c /<>/src/gromacs/fileio/enxio.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/espio.cpp.o -c /<>/src/gromacs/fileio/espio.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/filetypes.cpp.o -c /<>/src/gromacs/fileio/filetypes.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o -c /<>/src/gromacs/fileio/g96io.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o -c /<>/src/gromacs/fileio/gmx_internal_xdr.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio-xdr.cpp.o -c /<>/src/gromacs/fileio/gmxfio-xdr.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -c /<>/src/gromacs/fileio/gmxfio.cpp cd /<>/build/mpich-dp/src/gromacs && 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/read-params.cpp.o -c /<>/src/gromacs/awh/read-params.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/simd/support.cpp.o -c 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-I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/conformation-utilities.cpp.o -c /<>/src/gromacs/gmxlib/conformation-utilities.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/network.cpp.o -c /<>/src/gromacs/gmxlib/network.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nrnb.cpp.o -c /<>/src/gromacs/gmxlib/nrnb.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops 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-I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_generic_cg.cpp.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_generic_cg.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel.cpp.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nonbonded.cpp.o -c /<>/src/gromacs/gmxlib/nonbonded/nonbonded.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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-DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicc.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_cpu.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_cpu.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/broadcaststructs.cpp.o -c /<>/src/gromacs/mdlib/broadcaststructs.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/calc_verletbuf.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o -c /<>/src/gromacs/mdlib/calcmu.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security 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-I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/compute_io.cpp.o -c /<>/src/gromacs/mdlib/compute_io.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -c /<>/src/gromacs/mdlib/constr.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o -c /<>/src/gromacs/mdlib/forcerec.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/genborn.cpp.o -c /<>/src/gromacs/mdlib/genborn.cpp cd 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-I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/main.cpp.o -c /<>/src/gromacs/mdlib/main.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -c /<>/src/gromacs/mdlib/md_support.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdoutf.cpp.o -c /<>/src/gromacs/mdlib/mdoutf.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdsetup.cpp.o -c /<>/src/gromacs/mdlib/mdsetup.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/minimize.cpp.o -c /<>/src/gromacs/mdlib/minimize.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_atomdata.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_atomdata.cpp cd 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-I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/sighandler.cpp.o -c /<>/src/gromacs/mdlib/sighandler.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/sim_util.cpp.o -c /<>/src/gromacs/mdlib/sim_util.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/trajectory_writing.cpp.o -c /<>/src/gromacs/mdlib/trajectory_writing.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/update.cpp.o -c /<>/src/gromacs/mdlib/update.cpp cd 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-I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o -c /<>/src/gromacs/gpu_utils/hostallocator.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gpu_utils/gpu_utils.cpp.o -c /<>/src/gromacs/gpu_utils/gpu_utils.cpp cd /<>/build/mpich-dp/src/gromacs && 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/options/filenameoption.cpp.o -c /<>/src/gromacs/options/filenameoption.cpp cd /<>/build/mpich-dp/src/gromacs && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/mpich-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/options/filenameoptionmanager.cpp.o -c 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CMakeFiles/mdrun.dir/mdrun_main.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -o ../../bin/mdrun_mpi_d.mpich ../../lib/libgromacs_mdrun_mpi_d.mpich.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lpthread -lm make[3]: Leaving directory '/<>/build/mpich-dp' [100%] Built target mdrun make[2]: Leaving directory '/<>/build/mpich-dp' /usr/bin/cmake -E cmake_progress_start /<>/build/mpich-dp/CMakeFiles 0 make[1]: Leaving directory '/<>/build/mpich-dp' sed -e 's/#MPIABBR#/mpich/g' -e 's/#MPIPROG#/MPICH2/g' \ < debian/gromacs-parallel.README.Debian.in \ > debian/gromacs-mpich.README.Debian LD_LIBRARY_PATH=/<>/build/mpich/lib /usr/bin/make -j4 -C build/mpich check make[1]: Entering directory '/<>/build/mpich' /usr/bin/cmake -H/<> -B/<>/build/mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/make -f CMakeFiles/Makefile2 check make[2]: Entering directory '/<>/build/mpich' /usr/bin/cmake -H/<> -B/<>/build/mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/mpich/CMakeFiles 98 /usr/bin/make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all make[3]: Entering directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/depend /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make 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Leaving directory '/<>/build/mpich' /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build Scanning dependencies of target mdrunutility-test-shared make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/external/gmock-1.7.0 && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /<>/src/external/gmock-1.7.0/src/gmock-all.cc Scanning dependencies of target onlinehelp-test-shared make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /<>/src/gromacs/onlinehelp/tests/mock_helptopic.cpp make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich /<>/build/mpich/src/gromacs /<>/build/mpich/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[4]: Entering directory '/<>/build/mpich' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[4]: Leaving directory '/<>/build/mpich' [ 80%] Built target libgromacs cd /<>/build/mpich/src/external/gmock-1.7.0 && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -Wno-unused-variable -o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o -c /<>/src/external/gmock-1.7.0/gtest/src/gtest-all.cc make[4]: Leaving directory '/<>/build/mpich' [ 81%] Built target mdrunutility-test-shared make[4]: Leaving directory '/<>/build/mpich' [ 81%] Built target onlinehelp-test-shared cd /<>/build/mpich/src/external/gmock-1.7.0 && /usr/bin/cmake -P CMakeFiles/gmock.dir/cmake_clean_target.cmake cd /<>/build/mpich/src/external/gmock-1.7.0 && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libgmock.a CMakeFiles/gmock.dir/src/gmock-all.cc.o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o /usr/bin/ranlib ../../../lib/libgmock.a make[4]: Leaving directory '/<>/build/mpich' [ 81%] Built target gmock /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils /<>/build/mpich /<>/build/mpich/src/testutils /<>/build/mpich/src/testutils/CMakeFiles/testutils.dir/DependInfo.cmake --color= Scanning dependencies of target testutils make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG 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/<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/filematchers.cpp.o -c /<>/src/testutils/filematchers.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/interactivetest.cpp.o -c /<>/src/testutils/interactivetest.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/loggertest.cpp.o -c /<>/src/testutils/loggertest.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpi-printer.cpp.o -c /<>/src/testutils/mpi-printer.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /<>/src/testutils/mpitest.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata.cpp.o -c /<>/src/testutils/refdata.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata-xml.cpp.o -c /<>/src/testutils/refdata-xml.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stdiohelper.cpp.o -c /<>/src/testutils/stdiohelper.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stringtest.cpp.o -c /<>/src/testutils/stringtest.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testasserts.cpp.o -c /<>/src/testutils/testasserts.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfilemanager.cpp.o -c /<>/src/testutils/testfilemanager.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfileredirector.cpp.o -c /<>/src/testutils/testfileredirector.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testinit.cpp.o -c /<>/src/testutils/testinit.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testoptions.cpp.o -c /<>/src/testutils/testoptions.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/textblockmatchers.cpp.o -c /<>/src/testutils/textblockmatchers.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/xvgtest.cpp.o -c /<>/src/testutils/xvgtest.cpp cd /<>/build/mpich/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o -c /<>/src/external/tinyxml2/tinyxml2.cpp cd /<>/build/mpich/src/testutils && /usr/bin/cmake -P CMakeFiles/testutils.dir/cmake_clean_target.cmake cd /<>/build/mpich/src/testutils && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils.dir/link.txt --verbose=1 /usr/bin/ar qc ../../lib/libtestutils.a CMakeFiles/testutils.dir/cmdlinetest.cpp.o CMakeFiles/testutils.dir/conftest.cpp.o CMakeFiles/testutils.dir/filematchers.cpp.o CMakeFiles/testutils.dir/interactivetest.cpp.o CMakeFiles/testutils.dir/loggertest.cpp.o CMakeFiles/testutils.dir/mpi-printer.cpp.o CMakeFiles/testutils.dir/mpitest.cpp.o CMakeFiles/testutils.dir/refdata.cpp.o CMakeFiles/testutils.dir/refdata-xml.cpp.o CMakeFiles/testutils.dir/stdiohelper.cpp.o CMakeFiles/testutils.dir/stringtest.cpp.o CMakeFiles/testutils.dir/testasserts.cpp.o CMakeFiles/testutils.dir/testfilemanager.cpp.o CMakeFiles/testutils.dir/testfileredirector.cpp.o CMakeFiles/testutils.dir/testinit.cpp.o CMakeFiles/testutils.dir/testoptions.cpp.o CMakeFiles/testutils.dir/textblockmatchers.cpp.o CMakeFiles/testutils.dir/xvgtest.cpp.o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o /usr/bin/ranlib ../../lib/libtestutils.a make[4]: Leaving directory '/<>/build/mpich' [ 83%] Built target testutils /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/mpich /<>/build/mpich/src/testutils/tests /<>/build/mpich/src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/DependInfo.cmake --color= /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/compat/tests /<>/build/mpich /<>/build/mpich/src/gromacs/compat/tests /<>/build/mpich/src/gromacs/compat/tests/CMakeFiles/compat-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/mpich /<>/build/mpich/src/testutils/tests /<>/build/mpich/src/testutils/tests/CMakeFiles/testutils-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdlib/tests /<>/build/mpich /<>/build/mpich/src/gromacs/mdlib/tests /<>/build/mpich/src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/DependInfo.cmake --color= Scanning dependencies of target compat-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build Scanning dependencies of target testutils-mpi-test make[4]: Leaving directory '/<>/build/mpich' make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/compat/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/make_unique.cpp.o -c /<>/src/gromacs/compat/tests/make_unique.cpp /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o -c /<>/src/testutils/tests/mpitest.cpp Scanning dependencies of target mdlib-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build Scanning dependencies of target testutils-test make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/tests/calc_verletbuf.cpp make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/interactivetest.cpp.o -c /<>/src/testutils/tests/interactivetest.cpp cd /<>/build/mpich/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/compat/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /<>/src/gromacs/mdlib/tests/settle.cpp cd /<>/build/mpich/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-mpi-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-mpi-test ../../../lib/libtestutils.a ../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/compat-test.dir/make_unique.cpp.o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/compat-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 84%] Built target testutils-mpi-test /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/applied-forces/tests /<>/build/mpich /<>/build/mpich/src/gromacs/applied-forces/tests /<>/build/mpich/src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target applied-forces-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/applied-forces/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/electricfield.cpp.o -c /<>/src/gromacs/applied-forces/tests/electricfield.cpp cd /<>/build/mpich/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o -c /<>/src/testutils/tests/refdata_tests.cpp make[4]: Leaving directory '/<>/build/mpich' [ 84%] Built target compat-test /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/listed-forces/tests /<>/build/mpich /<>/build/mpich/src/gromacs/listed-forces/tests /<>/build/mpich/src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target listed-forces-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/listed-forces/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/bonded.cpp.o -c /<>/src/gromacs/listed-forces/tests/bonded.cpp cd /<>/build/mpich/src/gromacs/listed-forces/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/listed-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed-forces-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/listed-forces-test.dir/bonded.cpp.o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/listed-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/applied-forces/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp make[4]: Leaving directory '/<>/build/mpich' [ 85%] Built target listed-forces-test /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/commandline/tests /<>/build/mpich /<>/build/mpich/src/gromacs/commandline/tests /<>/build/mpich/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake --color= Scanning dependencies of target commandline-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp cd /<>/build/mpich/src/gromacs/applied-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied-forces-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/applied-forces-test.dir/electricfield.cpp.o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/applied-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /<>/src/gromacs/mdlib/tests/shake.cpp cd /<>/build/mpich/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /<>/src/testutils/tests/testasserts_tests.cpp make[4]: Leaving directory '/<>/build/mpich' [ 85%] Built target applied-forces-test /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/ewald/tests /<>/build/mpich /<>/build/mpich/src/gromacs/ewald/tests /<>/build/mpich/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake --color= Scanning dependencies of target ewald-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmebsplinetest.cpp cd /<>/build/mpich/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -c /<>/src/testutils/tests/xvgtest_tests.cpp cd /<>/build/mpich/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /<>/src/gromacs/mdlib/tests/simulationsignal.cpp cd /<>/build/mpich/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp cd /<>/build/mpich/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /<>/src/gromacs/ewald/tests/pmegathertest.cpp cd /<>/build/mpich/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-test.dir/interactivetest.cpp.o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-test ../../../lib/libtestutils.a ../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 85%] Built target testutils-test /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fft/tests /<>/build/mpich /<>/build/mpich/src/gromacs/fft/tests /<>/build/mpich/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake --color= Scanning dependencies of target fft-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/fft/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/fft.cpp.o -c /<>/src/gromacs/fft/tests/fft.cpp cd /<>/build/mpich/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp cd /<>/build/mpich/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o CMakeFiles/mdlib-test.dir/settle.cpp.o CMakeFiles/mdlib-test.dir/shake.cpp.o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/mdlib-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 86%] Built target mdlib-test /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gpu_utils/tests /<>/build/mpich /<>/build/mpich/src/gromacs/gpu_utils/tests /<>/build/mpich/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake --color= Scanning dependencies of target gpu_utils-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/gputest.cpp.o -c /<>/src/gromacs/gpu_utils/tests/gputest.cpp cd /<>/build/mpich/src/gromacs/fft/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /<>/src/gromacs/gpu_utils/tests/hostallocator.cpp cd /<>/build/mpich/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fft-test.dir/fft.cpp.o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fft-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 86%] Built target fft-test /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/hardware/tests /<>/build/mpich /<>/build/mpich/src/gromacs/hardware/tests /<>/build/mpich/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake --color= Scanning dependencies of target hardware-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/hardware/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /<>/src/gromacs/hardware/tests/hardwaretopology.cpp cd /<>/build/mpich/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp cd /<>/build/mpich/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesolvetest.cpp cd /<>/build/mpich/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -c /<>/src/gromacs/gpu_utils/tests/devicetransfers.cpp cd /<>/build/mpich/src/gromacs/hardware/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/hardware-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gpu_utils-test.dir/gputest.cpp.o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gpu_utils-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 86%] Built target hardware-test /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/math/tests /<>/build/mpich /<>/build/mpich/src/gromacs/math/tests /<>/build/mpich/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake --color= Scanning dependencies of target math-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/math/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/functions.cpp.o -c /<>/src/gromacs/math/tests/functions.cpp make[4]: Leaving directory '/<>/build/mpich' [ 87%] Built target gpu_utils-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/mpich /<>/build/mpich/src/gromacs/mdrunutility/tests /<>/build/mpich/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity.cpp cd /<>/build/mpich/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineparser.cpp cd /<>/build/mpich/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesplinespreadtest.cpp cd /<>/build/mpich/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp cd /<>/build/mpich/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/math/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/invertmatrix.cpp.o -c /<>/src/gromacs/math/tests/invertmatrix.cpp make[4]: Leaving directory '/<>/build/mpich' [ 87%] Built target mdrunutility-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/mpich /<>/build/mpich/src/gromacs/mdrunutility/tests /<>/build/mpich/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-mpi-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity-mpi.cpp cd /<>/build/mpich/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c /<>/src/gromacs/commandline/tests/pargs.cpp cd /<>/build/mpich/src/gromacs/math/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /<>/src/gromacs/math/tests/vectypes.cpp cd /<>/build/mpich/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /<>/src/gromacs/ewald/tests/pmetestcommon.cpp cd /<>/build/mpich/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/math/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-mpi-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/math-test.dir/functions.cpp.o CMakeFiles/math-test.dir/invertmatrix.cpp.o CMakeFiles/math-test.dir/vectypes.cpp.o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/math-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 87%] Built target math-test /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/mpich /<>/build/mpich/src/gromacs/onlinehelp/tests /<>/build/mpich/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake --color= Scanning dependencies of target onlinehelp-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpformat.cpp make[4]: Leaving directory '/<>/build/mpich' [ 87%] Built target mdrunutility-mpi-test /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/options/tests /<>/build/mpich /<>/build/mpich/src/gromacs/options/tests /<>/build/mpich/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake --color= Scanning dependencies of target options-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /<>/src/gromacs/options/tests/abstractoptionstorage.cpp cd /<>/build/mpich/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o -c /<>/src/gromacs/ewald/tests/testhardwarecontexts.cpp cd /<>/build/mpich/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpmanager.cpp cd /<>/build/mpich/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o CMakeFiles/commandline-test.dir/pargs.cpp.o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o ../../onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/commandline-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp make[4]: Leaving directory '/<>/build/mpich' [ 88%] Built target commandline-test /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/random/tests /<>/build/mpich /<>/build/mpich/src/gromacs/random/tests /<>/build/mpich/src/gromacs/random/tests/CMakeFiles/random-test.dir/DependInfo.cmake --color= Scanning dependencies of target random-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -c /<>/src/gromacs/random/tests/exponentialdistribution.cpp cd /<>/build/mpich/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/ewald-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 89%] Built target ewald-test /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/tables/tests /<>/build/mpich /<>/build/mpich/src/gromacs/tables/tests /<>/build/mpich/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake --color= Scanning dependencies of target table-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/tables/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/splinetable.cpp.o -c /<>/src/gromacs/tables/tests/splinetable.cpp cd /<>/build/mpich/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpwritercontext.cpp cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /<>/src/gromacs/random/tests/gammadistribution.cpp cd /<>/build/mpich/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/onlinehelp-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 90%] Built target onlinehelp-test /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/taskassignment/tests /<>/build/mpich /<>/build/mpich/src/gromacs/taskassignment/tests /<>/build/mpich/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake --color= Scanning dependencies of target taskassignment-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/taskassignment/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -c /<>/src/gromacs/taskassignment/tests/usergpuids.cpp cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /<>/src/gromacs/options/tests/filenameoption.cpp cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /<>/src/gromacs/random/tests/normaldistribution.cpp cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -c /<>/src/gromacs/options/tests/filenameoptionmanager.cpp cd /<>/build/mpich/src/gromacs/taskassignment/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/taskassignment-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/seed.cpp.o -c /<>/src/gromacs/random/tests/seed.cpp make[4]: Leaving directory '/<>/build/mpich' [ 90%] Built target taskassignment-test /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/utility/tests /<>/build/mpich /<>/build/mpich/src/gromacs/utility/tests /<>/build/mpich/src/gromacs/utility/tests/CMakeFiles/utility-test.dir/DependInfo.cmake --color= Scanning dependencies of target utility-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/alignedallocator.cpp.o -c /<>/src/gromacs/utility/tests/alignedallocator.cpp cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /<>/src/gromacs/random/tests/tabulatednormaldistribution.cpp cd /<>/build/mpich/src/gromacs/tables/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/option.cpp.o -c /<>/src/gromacs/options/tests/option.cpp cd /<>/build/mpich/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/table-test.dir/splinetable.cpp.o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/table-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /<>/src/gromacs/options/tests/optionsassigner.cpp make[4]: Leaving directory '/<>/build/mpich' [ 91%] Built target table-test /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fileio/tests /<>/build/mpich /<>/build/mpich/src/gromacs/fileio/tests /<>/build/mpich/src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/DependInfo.cmake --color= Scanning dependencies of target fileio-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/fileio/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /<>/src/gromacs/fileio/tests/confio.cpp cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/threefry.cpp.o -c /<>/src/gromacs/random/tests/threefry.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/arrayref.cpp.o -c /<>/src/gromacs/utility/tests/arrayref.cpp cd /<>/build/mpich/src/gromacs/fileio/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/readinp.cpp.o -c /<>/src/gromacs/fileio/tests/readinp.cpp cd /<>/build/mpich/src/gromacs/fileio/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /<>/src/gromacs/fileio/tests/tngio.cpp cd /<>/build/mpich/src/gromacs/fileio/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformintdistribution.cpp cd /<>/build/mpich/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fileio-test.dir/confio.cpp.o CMakeFiles/fileio-test.dir/readinp.cpp.o CMakeFiles/fileio-test.dir/tngio.cpp.o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fileio-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 92%] Built target fileio-test /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/pulling/tests /<>/build/mpich /<>/build/mpich/src/gromacs/pulling/tests /<>/build/mpich/src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/DependInfo.cmake --color= Scanning dependencies of target pull-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/pulling/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/pull.cpp.o -c /<>/src/gromacs/pulling/tests/pull.cpp cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformrealdistribution.cpp cd /<>/build/mpich/src/gromacs/pulling/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /<>/src/gromacs/options/tests/repeatingsection.cpp cd /<>/build/mpich/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/pull-test.dir/pull.cpp.o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/pull-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 92%] Built target pull-test /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/awh/tests /<>/build/mpich /<>/build/mpich/src/gromacs/awh/tests /<>/build/mpich/src/gromacs/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake --color= Scanning dependencies of target awh-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/awh/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/bias.cpp.o -c /<>/src/gromacs/awh/tests/bias.cpp cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/random-test.dir/exponentialdistribution.cpp.o CMakeFiles/random-test.dir/gammadistribution.cpp.o CMakeFiles/random-test.dir/normaldistribution.cpp.o CMakeFiles/random-test.dir/seed.cpp.o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o CMakeFiles/random-test.dir/threefry.cpp.o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/random-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 94%] Built target random-test /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/simd/tests /<>/build/mpich /<>/build/mpich/src/gromacs/simd/tests /<>/build/mpich/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake --color= Scanning dependencies of target simd-test make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /<>/src/gromacs/simd/tests/bootstrap_loadstore.cpp cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /<>/src/gromacs/options/tests/timeunitmanager.cpp cd /<>/build/mpich/src/gromacs/awh/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /<>/src/gromacs/awh/tests/biasstate.cpp cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/treesupport.cpp.o -c /<>/src/gromacs/options/tests/treesupport.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/base.cpp.o -c /<>/src/gromacs/simd/tests/base.cpp cd /<>/build/mpich/src/gromacs/awh/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/grid.cpp.o -c /<>/src/gromacs/awh/tests/grid.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/data.cpp.o -c /<>/src/gromacs/simd/tests/data.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd.cpp.o -c /<>/src/gromacs/simd/tests/simd.cpp cd /<>/build/mpich/src/gromacs/awh/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /<>/src/gromacs/utility/tests/bitmask32.cpp cd /<>/build/mpich/src/gromacs/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/awh-test.dir/bias.cpp.o CMakeFiles/awh-test.dir/biasstate.cpp.o CMakeFiles/awh-test.dir/grid.cpp.o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/awh-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 94%] Built target awh-test cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask64.cpp.o -c /<>/src/gromacs/utility/tests/bitmask64.cpp cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint.cpp cd /<>/build/mpich/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o CMakeFiles/options-test.dir/filenameoption.cpp.o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o CMakeFiles/options-test.dir/option.cpp.o CMakeFiles/options-test.dir/optionsassigner.cpp.o CMakeFiles/options-test.dir/repeatingsection.cpp.o CMakeFiles/options-test.dir/timeunitmanager.cpp.o CMakeFiles/options-test.dir/treesupport.cpp.o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/options-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /<>/src/gromacs/utility/tests/bitmask128.cpp make[4]: Leaving directory '/<>/build/mpich' [ 95%] Built target options-test cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint_util.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreeserializer.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd_vector_operations.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreetransform.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /<>/src/gromacs/simd/tests/simd_math.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/logger.cpp.o -c /<>/src/gromacs/utility/tests/logger.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_memory.cpp.o -c /<>/src/gromacs/simd/tests/simd_memory.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/mutex.cpp.o -c /<>/src/gromacs/utility/tests/mutex.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_integer.cpp.o -c /<>/src/gromacs/simd/tests/simd_integer.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/path.cpp.o -c /<>/src/gromacs/utility/tests/path.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /<>/src/gromacs/utility/tests/stringutil.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /<>/src/gromacs/utility/tests/textreader.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /<>/src/gromacs/simd/tests/simd4.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd4_floatingpoint.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd4_vector_operations.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /<>/src/gromacs/simd/tests/simd4_math.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /<>/src/gromacs/simd/tests/scalar.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /<>/src/gromacs/utility/tests/textwriter.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /<>/src/gromacs/utility/tests/typetraits.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /<>/src/gromacs/simd/tests/scalar_util.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /<>/src/gromacs/simd/tests/scalar_math.cpp cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/utility-test.dir/alignedallocator.cpp.o CMakeFiles/utility-test.dir/arrayref.cpp.o CMakeFiles/utility-test.dir/bitmask32.cpp.o CMakeFiles/utility-test.dir/bitmask64.cpp.o CMakeFiles/utility-test.dir/bitmask128.cpp.o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o CMakeFiles/utility-test.dir/logger.cpp.o CMakeFiles/utility-test.dir/mutex.cpp.o CMakeFiles/utility-test.dir/path.cpp.o CMakeFiles/utility-test.dir/stringutil.cpp.o CMakeFiles/utility-test.dir/textreader.cpp.o CMakeFiles/utility-test.dir/textwriter.cpp.o CMakeFiles/utility-test.dir/typetraits.cpp.o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/utility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [ 97%] Built target utility-test cd /<>/build/mpich/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o CMakeFiles/simd-test.dir/base.cpp.o CMakeFiles/simd-test.dir/data.cpp.o CMakeFiles/simd-test.dir/simd.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd_math.cpp.o CMakeFiles/simd-test.dir/simd_memory.cpp.o CMakeFiles/simd-test.dir/simd_integer.cpp.o CMakeFiles/simd-test.dir/simd4.cpp.o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd4_math.cpp.o CMakeFiles/simd-test.dir/scalar.cpp.o CMakeFiles/simd-test.dir/scalar_util.cpp.o CMakeFiles/simd-test.dir/scalar_math.cpp.o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/simd-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich' [100%] Built target simd-test /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/mpich /<>/build/mpich /<>/build/mpich/CMakeFiles/tests.dir/DependInfo.cmake --color= Scanning dependencies of target tests make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build make[4]: Entering directory '/<>/build/mpich' make[4]: Nothing to be done for 'CMakeFiles/tests.dir/build'. make[4]: Leaving directory '/<>/build/mpich' [100%] Built target tests /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/mpich /<>/build/mpich /<>/build/mpich/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake --color= Scanning dependencies of target run-ctest-nophys make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build make[4]: Entering directory '/<>/build/mpich' /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /<>/build/mpich Start 1: TestUtilsUnitTests 1/24 Test #1: TestUtilsUnitTests ............... Passed 0.18 sec Start 2: TestUtilsMpiUnitTests 2/24 Test #2: TestUtilsMpiUnitTests ............ Passed 0.22 sec Start 3: MdlibUnitTest 3/24 Test #3: MdlibUnitTest .................... Passed 0.07 sec Start 4: AppliedForcesUnitTest 4/24 Test #4: AppliedForcesUnitTest ............ Passed 0.03 sec Start 5: ListedForcesTest 5/24 Test #5: ListedForcesTest ................. Passed 0.06 sec Start 6: CommandLineUnitTests 6/24 Test #6: CommandLineUnitTests ............. Passed 0.09 sec Start 7: EwaldUnitTests 7/24 Test #7: EwaldUnitTests ................... Passed 1.67 sec Start 8: FFTUnitTests 8/24 Test #8: FFTUnitTests ..................... Passed 0.24 sec Start 9: GpuUtilsUnitTests 9/24 Test #9: GpuUtilsUnitTests ................ Passed 0.08 sec Start 10: HardwareUnitTests 10/24 Test #10: HardwareUnitTests ................ Passed 0.21 sec Start 11: MathUnitTests 11/24 Test #11: MathUnitTests .................... Passed 0.09 sec Start 12: MdrunUtilityUnitTests 12/24 Test #12: MdrunUtilityUnitTests ............ Passed 0.17 sec Start 13: MdrunUtilityMpiUnitTests 13/24 Test #13: MdrunUtilityMpiUnitTests ......... Passed 2.41 sec Start 14: OnlineHelpUnitTests 14/24 Test #14: OnlineHelpUnitTests .............. Passed 0.05 sec Start 15: OptionsUnitTests 15/24 Test #15: OptionsUnitTests ................. Passed 0.10 sec Start 16: RandomUnitTests 16/24 Test #16: RandomUnitTests .................. Passed 0.09 sec Start 17: TableUnitTests 17/24 Test #17: TableUnitTests ................... Passed 0.60 sec Start 18: TaskAssignmentUnitTests 18/24 Test #18: TaskAssignmentUnitTests .......... Passed 0.02 sec Start 19: UtilityUnitTests 19/24 Test #19: UtilityUnitTests ................. Passed 0.15 sec Start 20: FileIOTests 20/24 Test #20: FileIOTests ...................... Passed 0.06 sec Start 21: PullTest 21/24 Test #21: PullTest ......................... Passed 0.05 sec Start 22: AwhTest 22/24 Test #22: AwhTest .......................... Passed 0.08 sec Start 23: SimdUnitTests 23/24 Test #23: SimdUnitTests .................... Passed 0.45 sec Start 24: CompatibilityHelpersTests 24/24 Test #24: CompatibilityHelpersTests ........ Passed 0.03 sec 100% tests passed, 0 tests failed out of 24 Label Time Summary: GTest = 7.19 sec (24 tests) MpiTest = 2.63 sec (2 tests) UnitTest = 7.19 sec (24 tests) Total Test time (real) = 7.33 sec make[4]: Leaving directory '/<>/build/mpich' [100%] Built target run-ctest-nophys /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/tests /<>/build/mpich /<>/build/mpich/tests /<>/build/mpich/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake --color= Scanning dependencies of target missing-tests-notice make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. make[4]: Leaving directory '/<>/build/mpich' [100%] Built target missing-tests-notice /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend make[4]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/mpich /<>/build/mpich /<>/build/mpich/CMakeFiles/check.dir/DependInfo.cmake --color= Scanning dependencies of target check make[4]: Leaving directory '/<>/build/mpich' /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build make[4]: Entering directory '/<>/build/mpich' make[4]: Nothing to be done for 'CMakeFiles/check.dir/build'. make[4]: Leaving directory '/<>/build/mpich' [100%] Built target check make[3]: Leaving directory '/<>/build/mpich' /usr/bin/cmake -E cmake_progress_start /<>/build/mpich/CMakeFiles 0 make[2]: Leaving directory '/<>/build/mpich' make[1]: Leaving directory '/<>/build/mpich' LD_LIBRARY_PATH=/<>/build/mpich-dp/lib /usr/bin/make -j4 -C build/mpich-dp check make[1]: Entering directory '/<>/build/mpich-dp' /usr/bin/cmake -H/<> -B/<>/build/mpich-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/make -f CMakeFiles/Makefile2 check make[2]: Entering directory '/<>/build/mpich-dp' /usr/bin/cmake -H/<> -B/<>/build/mpich-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/mpich-dp/CMakeFiles 98 /usr/bin/make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all make[3]: Entering directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/depend /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/external/gmock-1.7.0 /<>/build/mpich-dp /<>/build/mpich-dp/src/external/gmock-1.7.0 /<>/build/mpich-dp/src/external/gmock-1.7.0/CMakeFiles/gmock.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs /<>/build/mpich-dp/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/onlinehelp/tests /<>/build/mpich-dp/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/mdrunutility/tests /<>/build/mpich-dp/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[4]: Entering directory '/<>/build/mpich-dp' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[4]: Leaving directory '/<>/build/mpich-dp' Scanning dependencies of target onlinehelp-test-shared make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /<>/src/gromacs/onlinehelp/tests/mock_helptopic.cpp [ 3%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend Scanning dependencies of target mdrunutility-test-shared make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp Scanning dependencies of target gmock make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/external/gmock-1.7.0 && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /<>/src/external/gmock-1.7.0/src/gmock-all.cc make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs /<>/build/mpich-dp/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[4]: Entering directory '/<>/build/mpich-dp' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[4]: Leaving directory '/<>/build/mpich-dp' [ 80%] Built target libgromacs cd /<>/build/mpich-dp/src/external/gmock-1.7.0 && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -Wno-unused-variable -o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o -c /<>/src/external/gmock-1.7.0/gtest/src/gtest-all.cc make[4]: Leaving directory '/<>/build/mpich-dp' [ 81%] Built target mdrunutility-test-shared make[4]: Leaving directory '/<>/build/mpich-dp' [ 81%] Built target onlinehelp-test-shared cd /<>/build/mpich-dp/src/external/gmock-1.7.0 && /usr/bin/cmake -P CMakeFiles/gmock.dir/cmake_clean_target.cmake cd /<>/build/mpich-dp/src/external/gmock-1.7.0 && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libgmock.a CMakeFiles/gmock.dir/src/gmock-all.cc.o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o /usr/bin/ranlib ../../../lib/libgmock.a make[4]: Leaving directory '/<>/build/mpich-dp' [ 81%] Built target gmock /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils /<>/build/mpich-dp /<>/build/mpich-dp/src/testutils /<>/build/mpich-dp/src/testutils/CMakeFiles/testutils.dir/DependInfo.cmake --color= Scanning dependencies of target testutils make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/cmdlinetest.cpp.o -c /<>/src/testutils/cmdlinetest.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/conftest.cpp.o -c /<>/src/testutils/conftest.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/filematchers.cpp.o -c /<>/src/testutils/filematchers.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/interactivetest.cpp.o -c /<>/src/testutils/interactivetest.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/loggertest.cpp.o -c /<>/src/testutils/loggertest.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpi-printer.cpp.o -c /<>/src/testutils/mpi-printer.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /<>/src/testutils/mpitest.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata.cpp.o -c /<>/src/testutils/refdata.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata-xml.cpp.o -c /<>/src/testutils/refdata-xml.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stdiohelper.cpp.o -c /<>/src/testutils/stdiohelper.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stringtest.cpp.o -c /<>/src/testutils/stringtest.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testasserts.cpp.o -c /<>/src/testutils/testasserts.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfilemanager.cpp.o -c /<>/src/testutils/testfilemanager.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfileredirector.cpp.o -c /<>/src/testutils/testfileredirector.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testinit.cpp.o -c /<>/src/testutils/testinit.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testoptions.cpp.o -c /<>/src/testutils/testoptions.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/textblockmatchers.cpp.o -c /<>/src/testutils/textblockmatchers.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/xvgtest.cpp.o -c /<>/src/testutils/xvgtest.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o -c /<>/src/external/tinyxml2/tinyxml2.cpp cd /<>/build/mpich-dp/src/testutils && /usr/bin/cmake -P CMakeFiles/testutils.dir/cmake_clean_target.cmake cd /<>/build/mpich-dp/src/testutils && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils.dir/link.txt --verbose=1 /usr/bin/ar qc ../../lib/libtestutils.a CMakeFiles/testutils.dir/cmdlinetest.cpp.o CMakeFiles/testutils.dir/conftest.cpp.o CMakeFiles/testutils.dir/filematchers.cpp.o CMakeFiles/testutils.dir/interactivetest.cpp.o CMakeFiles/testutils.dir/loggertest.cpp.o CMakeFiles/testutils.dir/mpi-printer.cpp.o CMakeFiles/testutils.dir/mpitest.cpp.o CMakeFiles/testutils.dir/refdata.cpp.o CMakeFiles/testutils.dir/refdata-xml.cpp.o CMakeFiles/testutils.dir/stdiohelper.cpp.o CMakeFiles/testutils.dir/stringtest.cpp.o CMakeFiles/testutils.dir/testasserts.cpp.o CMakeFiles/testutils.dir/testfilemanager.cpp.o CMakeFiles/testutils.dir/testfileredirector.cpp.o CMakeFiles/testutils.dir/testinit.cpp.o CMakeFiles/testutils.dir/testoptions.cpp.o CMakeFiles/testutils.dir/textblockmatchers.cpp.o CMakeFiles/testutils.dir/xvgtest.cpp.o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o /usr/bin/ranlib ../../lib/libtestutils.a make[4]: Leaving directory '/<>/build/mpich-dp' [ 83%] Built target testutils /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/depend /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/testutils/tests /<>/build/mpich-dp/src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/testutils/tests /<>/build/mpich-dp/src/testutils/tests/CMakeFiles/testutils-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdlib/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/mdlib/tests /<>/build/mpich-dp/src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/compat/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/compat/tests /<>/build/mpich-dp/src/gromacs/compat/tests/CMakeFiles/compat-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdlib-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build Scanning dependencies of target testutils-test Scanning dependencies of target testutils-mpi-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/build make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/tests/calc_verletbuf.cpp make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o -c /<>/src/testutils/tests/mpitest.cpp make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/interactivetest.cpp.o -c /<>/src/testutils/tests/interactivetest.cpp Scanning dependencies of target compat-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/compat/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/make_unique.cpp.o -c /<>/src/gromacs/compat/tests/make_unique.cpp cd /<>/build/mpich-dp/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/compat/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-mpi-test.dir/link.txt --verbose=1 cd /<>/build/mpich-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /<>/src/gromacs/mdlib/tests/settle.cpp /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-mpi-test ../../../lib/libtestutils.a ../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich-dp/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/compat-test.dir/make_unique.cpp.o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/compat-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 84%] Built target testutils-mpi-test /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/applied-forces/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/applied-forces/tests /<>/build/mpich-dp/src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target applied-forces-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/applied-forces/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/electricfield.cpp.o -c /<>/src/gromacs/applied-forces/tests/electricfield.cpp cd /<>/build/mpich-dp/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o -c /<>/src/testutils/tests/refdata_tests.cpp make[4]: Leaving directory '/<>/build/mpich-dp' [ 84%] Built target compat-test /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/listed-forces/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/listed-forces/tests /<>/build/mpich-dp/src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target listed-forces-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/listed-forces/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/bonded.cpp.o -c /<>/src/gromacs/listed-forces/tests/bonded.cpp cd /<>/build/mpich-dp/src/gromacs/listed-forces/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/listed-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed-forces-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/listed-forces-test.dir/bonded.cpp.o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/listed-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich-dp/src/gromacs/applied-forces/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp make[4]: Leaving directory '/<>/build/mpich-dp' [ 85%] Built target listed-forces-test /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/commandline/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/commandline/tests /<>/build/mpich-dp/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake --color= Scanning dependencies of target commandline-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp cd /<>/build/mpich-dp/src/gromacs/applied-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied-forces-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/applied-forces-test.dir/electricfield.cpp.o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/applied-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 85%] Built target applied-forces-test /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/ewald/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/ewald/tests /<>/build/mpich-dp/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake --color= Scanning dependencies of target ewald-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmebsplinetest.cpp cd /<>/build/mpich-dp/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /<>/src/testutils/tests/testasserts_tests.cpp cd /<>/build/mpich-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /<>/src/gromacs/mdlib/tests/shake.cpp cd /<>/build/mpich-dp/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -c /<>/src/testutils/tests/xvgtest_tests.cpp cd /<>/build/mpich-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp cd /<>/build/mpich-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /<>/src/gromacs/mdlib/tests/simulationsignal.cpp cd /<>/build/mpich-dp/src/testutils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /<>/src/gromacs/ewald/tests/pmegathertest.cpp cd /<>/build/mpich-dp/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-test.dir/interactivetest.cpp.o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-test ../../../lib/libtestutils.a ../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 85%] Built target testutils-test /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fft/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/fft/tests /<>/build/mpich-dp/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake --color= Scanning dependencies of target fft-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/fft/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/fft.cpp.o -c /<>/src/gromacs/fft/tests/fft.cpp cd /<>/build/mpich-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp cd /<>/build/mpich-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o CMakeFiles/mdlib-test.dir/settle.cpp.o CMakeFiles/mdlib-test.dir/shake.cpp.o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/mdlib-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 86%] Built target mdlib-test /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gpu_utils/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/gpu_utils/tests /<>/build/mpich-dp/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake --color= Scanning dependencies of target gpu_utils-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/gputest.cpp.o -c /<>/src/gromacs/gpu_utils/tests/gputest.cpp cd /<>/build/mpich-dp/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /<>/src/gromacs/gpu_utils/tests/hostallocator.cpp cd /<>/build/mpich-dp/src/gromacs/fft/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fft-test.dir/fft.cpp.o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fft-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 86%] Built target fft-test /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/hardware/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/hardware/tests /<>/build/mpich-dp/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake --color= Scanning dependencies of target hardware-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/hardware/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /<>/src/gromacs/hardware/tests/hardwaretopology.cpp cd /<>/build/mpich-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp cd /<>/build/mpich-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesolvetest.cpp cd /<>/build/mpich-dp/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -c /<>/src/gromacs/gpu_utils/tests/devicetransfers.cpp cd /<>/build/mpich-dp/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gpu_utils-test.dir/gputest.cpp.o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gpu_utils-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 87%] Built target gpu_utils-test /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/math/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/math/tests /<>/build/mpich-dp/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake --color= Scanning dependencies of target math-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/math/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/functions.cpp.o -c /<>/src/gromacs/math/tests/functions.cpp cd /<>/build/mpich-dp/src/gromacs/hardware/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineparser.cpp cd /<>/build/mpich-dp/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/hardware-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 87%] Built target hardware-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/mdrunutility/tests /<>/build/mpich-dp/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity.cpp cd /<>/build/mpich-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesplinespreadtest.cpp cd /<>/build/mpich-dp/src/gromacs/math/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/invertmatrix.cpp.o -c /<>/src/gromacs/math/tests/invertmatrix.cpp cd /<>/build/mpich-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp cd /<>/build/mpich-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 87%] Built target mdrunutility-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/mdrunutility/tests /<>/build/mpich-dp/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-mpi-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity-mpi.cpp cd /<>/build/mpich-dp/src/gromacs/math/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /<>/src/gromacs/math/tests/vectypes.cpp cd /<>/build/mpich-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c /<>/src/gromacs/commandline/tests/pargs.cpp cd /<>/build/mpich-dp/src/gromacs/math/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /<>/src/gromacs/ewald/tests/pmetestcommon.cpp cd /<>/build/mpich-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/math-test.dir/functions.cpp.o CMakeFiles/math-test.dir/invertmatrix.cpp.o CMakeFiles/math-test.dir/vectypes.cpp.o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/math-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich-dp/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-mpi-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 87%] Built target math-test /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/onlinehelp/tests /<>/build/mpich-dp/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake --color= Scanning dependencies of target onlinehelp-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpformat.cpp cd /<>/build/mpich-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp make[4]: Leaving directory '/<>/build/mpich-dp' [ 87%] Built target mdrunutility-mpi-test /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/options/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/options/tests /<>/build/mpich-dp/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake --color= Scanning dependencies of target options-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /<>/src/gromacs/options/tests/abstractoptionstorage.cpp cd /<>/build/mpich-dp/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o CMakeFiles/commandline-test.dir/pargs.cpp.o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o ../../onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/commandline-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o -c /<>/src/gromacs/ewald/tests/testhardwarecontexts.cpp make[4]: Leaving directory '/<>/build/mpich-dp' [ 88%] Built target commandline-test /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/random/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/random/tests /<>/build/mpich-dp/src/gromacs/random/tests/CMakeFiles/random-test.dir/DependInfo.cmake --color= Scanning dependencies of target random-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -c /<>/src/gromacs/random/tests/exponentialdistribution.cpp cd /<>/build/mpich-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpmanager.cpp cd /<>/build/mpich-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/ewald-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 89%] Built target ewald-test /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/tables/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/tables/tests /<>/build/mpich-dp/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake --color= Scanning dependencies of target table-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/tables/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/splinetable.cpp.o -c /<>/src/gromacs/tables/tests/splinetable.cpp cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /<>/src/gromacs/random/tests/gammadistribution.cpp cd /<>/build/mpich-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpwritercontext.cpp cd /<>/build/mpich-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/onlinehelp-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 90%] Built target onlinehelp-test /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/taskassignment/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/taskassignment/tests /<>/build/mpich-dp/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake --color= Scanning dependencies of target taskassignment-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/taskassignment/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -c /<>/src/gromacs/taskassignment/tests/usergpuids.cpp cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /<>/src/gromacs/random/tests/normaldistribution.cpp cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /<>/src/gromacs/options/tests/filenameoption.cpp cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/seed.cpp.o -c /<>/src/gromacs/random/tests/seed.cpp cd /<>/build/mpich-dp/src/gromacs/taskassignment/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -c /<>/src/gromacs/options/tests/filenameoptionmanager.cpp cd /<>/build/mpich-dp/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/taskassignment-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /<>/src/gromacs/random/tests/tabulatednormaldistribution.cpp make[4]: Leaving directory '/<>/build/mpich-dp' [ 90%] Built target taskassignment-test /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/utility/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/utility/tests /<>/build/mpich-dp/src/gromacs/utility/tests/CMakeFiles/utility-test.dir/DependInfo.cmake --color= Scanning dependencies of target utility-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/alignedallocator.cpp.o -c /<>/src/gromacs/utility/tests/alignedallocator.cpp cd /<>/build/mpich-dp/src/gromacs/tables/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/table-test.dir/splinetable.cpp.o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/table-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 91%] Built target table-test /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fileio/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/fileio/tests /<>/build/mpich-dp/src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/DependInfo.cmake --color= Scanning dependencies of target fileio-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/fileio/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /<>/src/gromacs/fileio/tests/confio.cpp cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/threefry.cpp.o -c /<>/src/gromacs/random/tests/threefry.cpp cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/option.cpp.o -c /<>/src/gromacs/options/tests/option.cpp cd /<>/build/mpich-dp/src/gromacs/fileio/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/readinp.cpp.o -c /<>/src/gromacs/fileio/tests/readinp.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/arrayref.cpp.o -c /<>/src/gromacs/utility/tests/arrayref.cpp cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /<>/src/gromacs/options/tests/optionsassigner.cpp cd /<>/build/mpich-dp/src/gromacs/fileio/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /<>/src/gromacs/fileio/tests/tngio.cpp cd /<>/build/mpich-dp/src/gromacs/fileio/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformintdistribution.cpp /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fileio-test.dir/confio.cpp.o CMakeFiles/fileio-test.dir/readinp.cpp.o CMakeFiles/fileio-test.dir/tngio.cpp.o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fileio-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 92%] Built target fileio-test /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/pulling/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/pulling/tests /<>/build/mpich-dp/src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/DependInfo.cmake --color= Scanning dependencies of target pull-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/pulling/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/pull.cpp.o -c /<>/src/gromacs/pulling/tests/pull.cpp cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformrealdistribution.cpp cd /<>/build/mpich-dp/src/gromacs/pulling/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/pull-test.dir/pull.cpp.o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/pull-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 92%] Built target pull-test /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/awh/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/awh/tests /<>/build/mpich-dp/src/gromacs/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake --color= Scanning dependencies of target awh-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/awh/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/bias.cpp.o -c /<>/src/gromacs/awh/tests/bias.cpp cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /<>/src/gromacs/options/tests/repeatingsection.cpp cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/random-test.dir/exponentialdistribution.cpp.o CMakeFiles/random-test.dir/gammadistribution.cpp.o CMakeFiles/random-test.dir/normaldistribution.cpp.o CMakeFiles/random-test.dir/seed.cpp.o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o CMakeFiles/random-test.dir/threefry.cpp.o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/random-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 94%] Built target random-test /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/simd/tests /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs/simd/tests /<>/build/mpich-dp/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake --color= Scanning dependencies of target simd-test make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /<>/src/gromacs/simd/tests/bootstrap_loadstore.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/base.cpp.o -c /<>/src/gromacs/simd/tests/base.cpp cd /<>/build/mpich-dp/src/gromacs/awh/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /<>/src/gromacs/awh/tests/biasstate.cpp cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /<>/src/gromacs/options/tests/timeunitmanager.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/data.cpp.o -c /<>/src/gromacs/simd/tests/data.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd.cpp.o -c /<>/src/gromacs/simd/tests/simd.cpp cd /<>/build/mpich-dp/src/gromacs/awh/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/grid.cpp.o -c /<>/src/gromacs/awh/tests/grid.cpp cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/treesupport.cpp.o -c /<>/src/gromacs/options/tests/treesupport.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint.cpp cd /<>/build/mpich-dp/src/gromacs/awh/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /<>/src/gromacs/utility/tests/bitmask32.cpp cd /<>/build/mpich-dp/src/gromacs/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/awh-test.dir/bias.cpp.o CMakeFiles/awh-test.dir/biasstate.cpp.o CMakeFiles/awh-test.dir/grid.cpp.o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/awh-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 94%] Built target awh-test cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask64.cpp.o -c /<>/src/gromacs/utility/tests/bitmask64.cpp cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /<>/src/gromacs/utility/tests/bitmask128.cpp cd /<>/build/mpich-dp/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o CMakeFiles/options-test.dir/filenameoption.cpp.o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o CMakeFiles/options-test.dir/option.cpp.o CMakeFiles/options-test.dir/optionsassigner.cpp.o CMakeFiles/options-test.dir/repeatingsection.cpp.o CMakeFiles/options-test.dir/timeunitmanager.cpp.o CMakeFiles/options-test.dir/treesupport.cpp.o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/options-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint_util.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreeserializer.cpp make[4]: Leaving directory '/<>/build/mpich-dp' [ 95%] Built target options-test cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd_vector_operations.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /<>/src/gromacs/simd/tests/simd_math.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreetransform.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/logger.cpp.o -c /<>/src/gromacs/utility/tests/logger.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/mutex.cpp.o -c /<>/src/gromacs/utility/tests/mutex.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/path.cpp.o -c /<>/src/gromacs/utility/tests/path.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /<>/src/gromacs/utility/tests/stringutil.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_memory.cpp.o -c /<>/src/gromacs/simd/tests/simd_memory.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /<>/src/gromacs/utility/tests/textreader.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_integer.cpp.o -c /<>/src/gromacs/simd/tests/simd_integer.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /<>/src/gromacs/simd/tests/simd4.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /<>/src/gromacs/utility/tests/textwriter.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd4_floatingpoint.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd4_vector_operations.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /<>/src/gromacs/utility/tests/typetraits.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /<>/src/gromacs/simd/tests/simd4_math.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /<>/src/gromacs/simd/tests/scalar.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /<>/src/gromacs/simd/tests/scalar_util.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /<>/src/gromacs/simd/tests/scalar_math.cpp cd /<>/build/mpich-dp/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/utility-test.dir/alignedallocator.cpp.o CMakeFiles/utility-test.dir/arrayref.cpp.o CMakeFiles/utility-test.dir/bitmask32.cpp.o CMakeFiles/utility-test.dir/bitmask64.cpp.o CMakeFiles/utility-test.dir/bitmask128.cpp.o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o CMakeFiles/utility-test.dir/logger.cpp.o CMakeFiles/utility-test.dir/mutex.cpp.o CMakeFiles/utility-test.dir/path.cpp.o CMakeFiles/utility-test.dir/stringutil.cpp.o CMakeFiles/utility-test.dir/textreader.cpp.o CMakeFiles/utility-test.dir/textwriter.cpp.o CMakeFiles/utility-test.dir/typetraits.cpp.o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/utility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [ 97%] Built target utility-test cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.mpich -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/mpich-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/mpich-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/mpich-dp/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.mpich -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o CMakeFiles/simd-test.dir/base.cpp.o CMakeFiles/simd-test.dir/data.cpp.o CMakeFiles/simd-test.dir/simd.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd_math.cpp.o CMakeFiles/simd-test.dir/simd_memory.cpp.o CMakeFiles/simd-test.dir/simd_integer.cpp.o CMakeFiles/simd-test.dir/simd4.cpp.o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd4_math.cpp.o CMakeFiles/simd-test.dir/scalar.cpp.o CMakeFiles/simd-test.dir/scalar_util.cpp.o CMakeFiles/simd-test.dir/scalar_math.cpp.o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/simd-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.mpich.a ../../../../lib/libgmock.a -lpthread -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm -lpthread make[4]: Leaving directory '/<>/build/mpich-dp' [100%] Built target simd-test /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/mpich-dp /<>/build/mpich-dp /<>/build/mpich-dp/CMakeFiles/tests.dir/DependInfo.cmake --color= Scanning dependencies of target tests make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build make[4]: Entering directory '/<>/build/mpich-dp' make[4]: Nothing to be done for 'CMakeFiles/tests.dir/build'. make[4]: Leaving directory '/<>/build/mpich-dp' [100%] Built target tests /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/mpich-dp /<>/build/mpich-dp /<>/build/mpich-dp/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake --color= Scanning dependencies of target run-ctest-nophys make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build make[4]: Entering directory '/<>/build/mpich-dp' /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /<>/build/mpich-dp Start 1: TestUtilsUnitTests 1/24 Test #1: TestUtilsUnitTests ............... Passed 0.16 sec Start 2: TestUtilsMpiUnitTests 2/24 Test #2: TestUtilsMpiUnitTests ............ Passed 0.20 sec Start 3: MdlibUnitTest 3/24 Test #3: MdlibUnitTest .................... Passed 0.06 sec Start 4: AppliedForcesUnitTest 4/24 Test #4: AppliedForcesUnitTest ............ Passed 0.02 sec Start 5: ListedForcesTest 5/24 Test #5: ListedForcesTest ................. Passed 0.03 sec Start 6: CommandLineUnitTests 6/24 Test #6: CommandLineUnitTests ............. Passed 0.10 sec Start 7: EwaldUnitTests 7/24 Test #7: EwaldUnitTests ................... Passed 1.34 sec Start 8: FFTUnitTests 8/24 Test #8: FFTUnitTests ..................... Passed 0.18 sec Start 9: GpuUtilsUnitTests 9/24 Test #9: GpuUtilsUnitTests ................ Passed 0.07 sec Start 10: HardwareUnitTests 10/24 Test #10: HardwareUnitTests ................ Passed 0.10 sec Start 11: MathUnitTests 11/24 Test #11: MathUnitTests .................... Passed 0.04 sec Start 12: MdrunUtilityUnitTests 12/24 Test #12: MdrunUtilityUnitTests ............ Passed 0.06 sec Start 13: MdrunUtilityMpiUnitTests 13/24 Test #13: MdrunUtilityMpiUnitTests ......... Passed 0.73 sec Start 14: OnlineHelpUnitTests 14/24 Test #14: OnlineHelpUnitTests .............. Passed 0.07 sec Start 15: OptionsUnitTests 15/24 Test #15: OptionsUnitTests ................. Passed 0.16 sec Start 16: RandomUnitTests 16/24 Test #16: RandomUnitTests .................. Passed 0.08 sec Start 17: TableUnitTests 17/24 Test #17: TableUnitTests ................... Passed 1.22 sec Start 18: TaskAssignmentUnitTests 18/24 Test #18: TaskAssignmentUnitTests .......... Passed 0.05 sec Start 19: UtilityUnitTests 19/24 Test #19: UtilityUnitTests ................. Passed 0.15 sec Start 20: FileIOTests 20/24 Test #20: FileIOTests ...................... Passed 0.04 sec Start 21: PullTest 21/24 Test #21: PullTest ......................... Passed 0.04 sec Start 22: AwhTest 22/24 Test #22: AwhTest .......................... Passed 0.08 sec Start 23: SimdUnitTests 23/24 Test #23: SimdUnitTests .................... Passed 0.29 sec Start 24: CompatibilityHelpersTests 24/24 Test #24: CompatibilityHelpersTests ........ Passed 0.04 sec 100% tests passed, 0 tests failed out of 24 Label Time Summary: GTest = 5.33 sec (24 tests) MpiTest = 0.93 sec (2 tests) UnitTest = 5.33 sec (24 tests) Total Test time (real) = 5.46 sec make[4]: Leaving directory '/<>/build/mpich-dp' [100%] Built target run-ctest-nophys /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/tests /<>/build/mpich-dp /<>/build/mpich-dp/tests /<>/build/mpich-dp/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake --color= Scanning dependencies of target missing-tests-notice make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. make[4]: Leaving directory '/<>/build/mpich-dp' [100%] Built target missing-tests-notice /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend make[4]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/mpich-dp /<>/build/mpich-dp /<>/build/mpich-dp/CMakeFiles/check.dir/DependInfo.cmake --color= Scanning dependencies of target check make[4]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build make[4]: Entering directory '/<>/build/mpich-dp' make[4]: Nothing to be done for 'CMakeFiles/check.dir/build'. make[4]: Leaving directory '/<>/build/mpich-dp' [100%] Built target check make[3]: Leaving directory '/<>/build/mpich-dp' /usr/bin/cmake -E cmake_progress_start /<>/build/mpich-dp/CMakeFiles 0 make[2]: Leaving directory '/<>/build/mpich-dp' make[1]: Leaving directory '/<>/build/mpich-dp' touch build-mpich dh_testdir /usr/bin/make -j4 -C build/openmpi make[1]: Entering directory '/<>/build/openmpi' /usr/bin/cmake -H/<> -B/<>/build/openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi/CMakeFiles /<>/build/openmpi/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/openmpi /<>/build/openmpi/src/programs /<>/build/openmpi/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi /<>/build/openmpi/src/gromacs /<>/build/openmpi/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= Scanning dependencies of target tng_io_obj Scanning dependencies of target mdrun_objlib make[3]: Leaving directory '/<>/build/openmpi' make[3]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwlzh.c.o -c /<>/src/external/tng_io/src/compression/bwlzh.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwt.c.o -c /<>/src/external/tng_io/src/compression/bwt.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/coder.c.o -c /<>/src/external/tng_io/src/compression/coder.c make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o -c /<>/src/programs/mdrun/md.cpp cd /<>/build/openmpi/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -c /<>/src/programs/mdrun/mdrun.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/dict.c.o -c /<>/src/external/tng_io/src/compression/dict.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/fixpoint.c.o -c /<>/src/external/tng_io/src/compression/fixpoint.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffman.c.o -c /<>/src/external/tng_io/src/compression/huffman.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffmem.c.o -c /<>/src/external/tng_io/src/compression/huffmem.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/lz77.c.o -c /<>/src/external/tng_io/src/compression/lz77.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/merge_sort.c.o -c /<>/src/external/tng_io/src/compression/merge_sort.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/mtf.c.o -c /<>/src/external/tng_io/src/compression/mtf.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/rle.c.o -c /<>/src/external/tng_io/src/compression/rle.c cd /<>/build/openmpi/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o -c /<>/src/programs/mdrun/membed.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/tng_compress.c.o -c /<>/src/external/tng_io/src/compression/tng_compress.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/vals16.c.o -c /<>/src/external/tng_io/src/compression/vals16.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/warnmalloc.c.o -c /<>/src/external/tng_io/src/compression/warnmalloc.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/widemuldiv.c.o -c /<>/src/external/tng_io/src/compression/widemuldiv.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc2.c.o -c /<>/src/external/tng_io/src/compression/xtc2.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc3.c.o -c /<>/src/external/tng_io/src/compression/xtc3.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/tng_io.c.o -c /<>/src/external/tng_io/src/lib/tng_io.c cd /<>/build/openmpi/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o -c /<>/src/programs/mdrun/repl_ex.cpp cd /<>/build/openmpi/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -c /<>/src/programs/mdrun/runner.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/md5.c.o -c /<>/src/external/tng_io/src/lib/md5.c make[3]: Leaving directory '/<>/build/openmpi' [ 1%] Built target mdrun_objlib make[3]: Leaving directory '/<>/build/openmpi' [ 5%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/<>/build/openmpi/VersionInfo.cmake -D VERSION_CMAKEIN=/<>/src/gromacs/utility/baseversion-gen.c.cmakein -D VERSION_OUT=utility/baseversion-gen.c -P /<>/cmake/gmxConfigureVersionInfo.cmake cd /<>/build/openmpi/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.c cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi /<>/build/openmpi/src/gromacs /<>/build/openmpi/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= Scanning dependencies of target libgromacs make[3]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/bonded.cpp.o -c /<>/src/gromacs/listed-forces/bonded.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/disre.cpp.o -c /<>/src/gromacs/listed-forces/disre.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-forces.cpp.o -c /<>/src/gromacs/listed-forces/listed-forces.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-internal.cpp.o -c /<>/src/gromacs/listed-forces/listed-internal.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/manage-threading.cpp.o -c /<>/src/gromacs/listed-forces/manage-threading.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/orires.cpp.o -c /<>/src/gromacs/listed-forces/orires.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/pairs.cpp.o -c /<>/src/gromacs/listed-forces/pairs.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/position-restraints.cpp.o -c /<>/src/gromacs/listed-forces/position-restraints.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/restcbt.cpp.o -c /<>/src/gromacs/listed-forces/restcbt.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpcontext.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpmodule.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpwriter.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineinit.cpp.o -c /<>/src/gromacs/commandline/cmdlineinit.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinemodule.cpp.o -c /<>/src/gromacs/commandline/cmdlinemodule.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/cmdlinemodulemanager.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineoptionsmodule.cpp.o -c /<>/src/gromacs/commandline/cmdlineoptionsmodule.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineparser.cpp.o -c /<>/src/gromacs/commandline/cmdlineparser.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineprogramcontext.cpp.o -c /<>/src/gromacs/commandline/cmdlineprogramcontext.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/filenm.cpp.o -c /<>/src/gromacs/commandline/filenm.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/pargs.cpp.o -c /<>/src/gromacs/commandline/pargs.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/shellcompletions.cpp.o -c /<>/src/gromacs/commandline/shellcompletions.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/viewit.cpp.o -c /<>/src/gromacs/commandline/viewit.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o -c /<>/src/gromacs/domdec/dlbtiming.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o -c /<>/src/gromacs/domdec/domdec.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_box.cpp.o -c /<>/src/gromacs/domdec/domdec_box.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o -c /<>/src/gromacs/domdec/domdec_constraints.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o -c /<>/src/gromacs/domdec/domdec_network.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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-I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_topology.cpp.o -c /<>/src/gromacs/domdec/domdec_topology.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o -c /<>/src/gromacs/domdec/domdec_vsite.cpp cd /<>/build/openmpi/src/gromacs && 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-I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/long-range-correction.cpp.o -c /<>/src/gromacs/ewald/long-range-correction.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-gather.cpp.o -c /<>/src/gromacs/ewald/pme-gather.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-load-balancing.cpp.o -c /<>/src/gromacs/ewald/pme-load-balancing.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-only.cpp.o -c /<>/src/gromacs/ewald/pme-only.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-pp.cpp.o -c /<>/src/gromacs/ewald/pme-pp.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-redistribute.cpp.o -c /<>/src/gromacs/ewald/pme-redistribute.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-solve.cpp.o -c /<>/src/gromacs/ewald/pme-solve.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-spline-work.cpp.o -c /<>/src/gromacs/ewald/pme-spline-work.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme-spread.cpp.o -c /<>/src/gromacs/ewald/pme-spread.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/pme.cpp.o -c /<>/src/gromacs/ewald/pme.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/linearalgebra/eigensolver.cpp.o -c /<>/src/gromacs/linearalgebra/eigensolver.cpp cd 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdtypes/md_enums.cpp.o -c /<>/src/gromacs/mdtypes/md_enums.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdtypes/observableshistory.cpp.o -c /<>/src/gromacs/mdtypes/observableshistory.cpp 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/<>/src/gromacs/topology/atoms.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/atomsbuilder.cpp.o -c /<>/src/gromacs/topology/atomsbuilder.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/ifunc.cpp.o -c /<>/src/gromacs/topology/ifunc.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/index.cpp.o -c /<>/src/gromacs/topology/index.cpp cd 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-I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/symtab.cpp.o -c /<>/src/gromacs/topology/symtab.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/topology/topology.cpp.o -c /<>/src/gromacs/topology/topology.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi 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/<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/errorcodes.cpp.o -c /<>/src/gromacs/utility/errorcodes.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/ikeyvaluetreeerror.cpp.o -c /<>/src/gromacs/utility/ikeyvaluetreeerror.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/init.cpp.o -c /<>/src/gromacs/utility/init.cpp cd /<>/build/openmpi/src/gromacs && 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-I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/keyvaluetreeserializer.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetreetransform.cpp.o -c /<>/src/gromacs/utility/keyvaluetreetransform.cpp cd /<>/build/openmpi/src/gromacs && 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-I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/niceheader.cpp.o -c /<>/src/gromacs/utility/niceheader.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/path.cpp.o -c /<>/src/gromacs/utility/path.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H 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-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/smalloc.cpp.o -c /<>/src/gromacs/utility/smalloc.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/strconvert.cpp.o -c /<>/src/gromacs/utility/strconvert.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/strdb.cpp.o -c /<>/src/gromacs/utility/strdb.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/stringstream.cpp.o -c 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o -c /<>/src/gromacs/utility/sysinfo.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/textreader.cpp.o -c /<>/src/gromacs/utility/textreader.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/textwriter.cpp.o -c /<>/src/gromacs/utility/textwriter.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/txtdump.cpp.o -c /<>/src/gromacs/utility/txtdump.cpp cd 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-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/oenv.cpp.o -c /<>/src/gromacs/fileio/oenv.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/pdbio.cpp.o -c /<>/src/gromacs/fileio/pdbio.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit 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/<>/src/gromacs/fileio/timecontrol.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/tngio.cpp.o -c /<>/src/gromacs/fileio/tngio.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG 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-isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_cpu.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_cpu.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/broadcaststructs.cpp.o -c /<>/src/gromacs/mdlib/broadcaststructs.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calcvir.cpp.o -c /<>/src/gromacs/mdlib/calcvir.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/clincs.cpp.o -c /<>/src/gromacs/mdlib/clincs.cpp cd /<>/build/openmpi/src/gromacs 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-I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/expanded.cpp.o -c /<>/src/gromacs/mdlib/expanded.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/force.cpp.o -c /<>/src/gromacs/mdlib/force.cpp 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-I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o -c /<>/src/gromacs/mdlib/gmx_omp_nthreads.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o -c /<>/src/gromacs/mdlib/groupcoord.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 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-I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/shakef.cpp.o -c /<>/src/gromacs/mdlib/shakef.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/shellfc.cpp.o -c /<>/src/gromacs/mdlib/shellfc.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/tgroup.cpp.o -c /<>/src/gromacs/mdlib/tgroup.cpp cd /<>/build/openmpi/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/tpi.cpp.o -c /<>/src/gromacs/mdlib/tpi.cpp cd /<>/build/openmpi/src/gromacs && 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CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwt.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/coder.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/dict.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/fixpoint.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffman.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffmem.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/lz77.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/merge_sort.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/mtf.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/rle.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/tng_compress.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/vals16.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/warnmalloc.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/widemuldiv.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc2.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc3.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/tng_io.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/md5.c.o /usr/bin/ranlib ../../lib/libgromacs_mdrun_mpi.openmpi.a make[3]: Leaving directory '/<>/build/openmpi' [100%] Built target libgromacs /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/depend make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/openmpi /<>/build/openmpi/src/programs /<>/build/openmpi/src/programs/CMakeFiles/mdrun.dir/DependInfo.cmake --color= Scanning dependencies of target mdrun make[3]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/build make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/mdrun.dir/mdrun_main.cpp.o -c /<>/src/programs/mdrun_main.cpp cd /<>/build/openmpi/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrun.dir/mdrun_main.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -o ../../bin/mdrun_mpi.openmpi ../../lib/libgromacs_mdrun_mpi.openmpi.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[3]: Leaving directory '/<>/build/openmpi' [100%] Built target mdrun make[2]: Leaving directory '/<>/build/openmpi' /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi/CMakeFiles 0 make[1]: Leaving directory '/<>/build/openmpi' /usr/bin/make -j4 -C build/openmpi-dp make[1]: Entering directory '/<>/build/openmpi-dp' /usr/bin/cmake -H/<> -B/<>/build/openmpi-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi-dp/CMakeFiles /<>/build/openmpi-dp/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[3]: Entering directory '/<>/build/openmpi-dp' make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs /<>/build/openmpi-dp/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/programs /<>/build/openmpi-dp/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= Scanning dependencies of target tng_io_obj make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build Scanning dependencies of target mdrun_objlib make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwlzh.c.o -c /<>/src/external/tng_io/src/compression/bwlzh.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/bwt.c.o -c /<>/src/external/tng_io/src/compression/bwt.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/coder.c.o -c /<>/src/external/tng_io/src/compression/coder.c make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o -c /<>/src/programs/mdrun/md.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/dict.c.o -c /<>/src/external/tng_io/src/compression/dict.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/fixpoint.c.o -c /<>/src/external/tng_io/src/compression/fixpoint.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffman.c.o -c /<>/src/external/tng_io/src/compression/huffman.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/huffmem.c.o -c /<>/src/external/tng_io/src/compression/huffmem.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/lz77.c.o -c /<>/src/external/tng_io/src/compression/lz77.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/merge_sort.c.o -c /<>/src/external/tng_io/src/compression/merge_sort.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/mtf.c.o -c /<>/src/external/tng_io/src/compression/mtf.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/rle.c.o -c /<>/src/external/tng_io/src/compression/rle.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/tng_compress.c.o -c /<>/src/external/tng_io/src/compression/tng_compress.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/vals16.c.o -c /<>/src/external/tng_io/src/compression/vals16.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/warnmalloc.c.o -c /<>/src/external/tng_io/src/compression/warnmalloc.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/widemuldiv.c.o -c /<>/src/external/tng_io/src/compression/widemuldiv.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc2.c.o -c /<>/src/external/tng_io/src/compression/xtc2.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc3.c.o -c /<>/src/external/tng_io/src/compression/xtc3.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/tng_io.c.o -c /<>/src/external/tng_io/src/lib/tng_io.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/md5.c.o -c /<>/src/external/tng_io/src/lib/md5.c cd /<>/build/openmpi-dp/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -c /<>/src/programs/mdrun/mdrun.cpp cd /<>/build/openmpi-dp/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o -c /<>/src/programs/mdrun/membed.cpp cd /<>/build/openmpi-dp/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o -c /<>/src/programs/mdrun/repl_ex.cpp cd /<>/build/openmpi-dp/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -c /<>/src/programs/mdrun/runner.cpp make[3]: Leaving directory '/<>/build/openmpi-dp' [ 1%] Built target mdrun_objlib make[3]: Leaving directory '/<>/build/openmpi-dp' [ 5%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/<>/build/openmpi-dp/VersionInfo.cmake -D VERSION_CMAKEIN=/<>/src/gromacs/utility/baseversion-gen.c.cmakein -D VERSION_OUT=utility/baseversion-gen.c -P /<>/cmake/gmxConfigureVersionInfo.cmake cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.c cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs /<>/build/openmpi-dp/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= Scanning dependencies of target libgromacs make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/bonded.cpp.o -c /<>/src/gromacs/listed-forces/bonded.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/disre.cpp.o -c /<>/src/gromacs/listed-forces/disre.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-forces.cpp.o -c /<>/src/gromacs/listed-forces/listed-forces.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/listed-internal.cpp.o -c /<>/src/gromacs/listed-forces/listed-internal.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/manage-threading.cpp.o -c /<>/src/gromacs/listed-forces/manage-threading.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/orires.cpp.o -c /<>/src/gromacs/listed-forces/orires.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/pairs.cpp.o -c /<>/src/gromacs/listed-forces/pairs.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/position-restraints.cpp.o -c /<>/src/gromacs/listed-forces/position-restraints.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/listed-forces/restcbt.cpp.o -c /<>/src/gromacs/listed-forces/restcbt.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpcontext.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpmodule.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/cmdlinehelpwriter.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineinit.cpp.o -c /<>/src/gromacs/commandline/cmdlineinit.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlinemodule.cpp.o -c /<>/src/gromacs/commandline/cmdlinemodule.cpp cd /<>/build/openmpi-dp/src/gromacs && 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/cmdlineprogramcontext.cpp.o -c /<>/src/gromacs/commandline/cmdlineprogramcontext.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/commandline/filenm.cpp.o -c 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-I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o -c /<>/src/gromacs/domdec/domdec_vsite.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/ewald/calculate-spline-moduli.cpp.o -c /<>/src/gromacs/ewald/calculate-spline-moduli.cpp cd /<>/build/openmpi-dp/src/gromacs && 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-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -c /<>/src/gromacs/utility/baseversion.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/binaryinformation.cpp.o -c /<>/src/gromacs/utility/binaryinformation.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/compare.cpp.o -c /<>/src/gromacs/utility/compare.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/coolstuff.cpp.o -c /<>/src/gromacs/utility/coolstuff.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/cstringutil.cpp.o -c /<>/src/gromacs/utility/cstringutil.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/datafilefinder.cpp.o -c /<>/src/gromacs/utility/datafilefinder.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/directoryenumerator.cpp.o -c /<>/src/gromacs/utility/directoryenumerator.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/errorcodes.cpp.o -c /<>/src/gromacs/utility/errorcodes.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/errorformat.cpp.o -c /<>/src/gromacs/utility/errorformat.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/exceptions.cpp.o -c /<>/src/gromacs/utility/exceptions.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/fatalerror.cpp.o -c /<>/src/gromacs/utility/fatalerror.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/fileredirector.cpp.o -c /<>/src/gromacs/utility/fileredirector.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/filestream.cpp.o -c /<>/src/gromacs/utility/filestream.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/futil.cpp.o -c /<>/src/gromacs/utility/futil.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/gmxassert.cpp.o -c /<>/src/gromacs/utility/gmxassert.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/gmxomp.cpp.o -c /<>/src/gromacs/utility/gmxomp.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/gmxregex.cpp.o -c /<>/src/gromacs/utility/gmxregex.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/ikeyvaluetreeerror.cpp.o -c /<>/src/gromacs/utility/ikeyvaluetreeerror.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/init.cpp.o -c /<>/src/gromacs/utility/init.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/inmemoryserializer.cpp.o -c /<>/src/gromacs/utility/inmemoryserializer.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/int64_to_int.cpp.o -c /<>/src/gromacs/utility/int64_to_int.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o -c /<>/src/gromacs/utility/keyvaluetree.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/utility/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/keyvaluetreeserializer.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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/<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/checkpoint.cpp.o -c /<>/src/gromacs/fileio/checkpoint.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o -c /<>/src/gromacs/fileio/g96io.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o -c 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -c /<>/src/gromacs/fileio/libxdrf.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -c /<>/src/gromacs/fileio/matio.cpp cd 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-I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/swap/swapcoords.cpp.o -c /<>/src/gromacs/swap/swapcoords.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/essentialdynamics/edsam.cpp.o -c /<>/src/gromacs/essentialdynamics/edsam.cpp cd /<>/build/openmpi-dp/src/gromacs && 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/<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/awh/pointstate.cpp.o -c /<>/src/gromacs/awh/pointstate.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o 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-isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/chargegroup.cpp.o -c /<>/src/gromacs/gmxlib/chargegroup.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/conformation-utilities.cpp.o -c 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nrnb.cpp.o -c /<>/src/gromacs/gmxlib/nrnb.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_free_energy.cpp.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_free_energy.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_generic.cpp.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_generic.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_generic_cg.cpp.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_generic_cg.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel.cpp.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nonbonded.cpp.o -c /<>/src/gromacs/gmxlib/nonbonded/nonbonded.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwBham_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwLJ_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCSTab_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwBham_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwLJ_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecCoul_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwBhamSh_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJEwSh_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwLJSh_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSh_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwBhamSw_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwLJSw_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEwSw_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwBham_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJEw_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwLJ_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecEw_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecGB_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSh_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBhamSw_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEwSh_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJEw_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSh_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJSw_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecNone_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSh_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwBhamSw_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSh_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwLJSw_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRFCut_VdwNone_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwBham_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwCSTab_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwLJ_GeomW4W4_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomP1P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3P1_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_ElecRF_VdwNone_GeomW3W3_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops 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-isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsall.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_allvsallgb.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicc.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c.o -c /<>/src/gromacs/gmxlib/nonbonded/nb_kernel_c/nb_kernel_c.c cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_F_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_4xn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_4xn/nbnxn_kernel_simd_4xn_prune.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEwTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecEw_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTabTwinCut_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecQSTab_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJCombLB_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJEwCombGeom_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJFSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJPSw_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_F_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_ElecRF_VdwLJ_VgrpF_2xnn.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/simd_2xnn/nbnxn_kernel_simd_2xnn_prune.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_common.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_cpu.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_cpu.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_gpu_ref.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_prune.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp.o -c /<>/src/gromacs/mdlib/nbnxn_kernels/nbnxn_kernel_ref_prune.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/broadcaststructs.cpp.o -c /<>/src/gromacs/mdlib/broadcaststructs.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/calc_verletbuf.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o -c /<>/src/gromacs/mdlib/calcmu.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/calcvir.cpp.o -c /<>/src/gromacs/mdlib/calcvir.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG 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/<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -c /<>/src/gromacs/mdlib/md_support.cpp cd /<>/build/openmpi-dp/src/gromacs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DUSE_STD_INTTYPES_H -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -I/<>/src/external/tng_io/include -I/<>/build/openmpi-dp/tng/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o -c /<>/src/gromacs/mdlib/mdatoms.cpp cd 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CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/widemuldiv.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc2.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/compression/xtc3.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/tng_io.c.o CMakeFiles/tng_io_obj.dir/__/external/tng_io/src/lib/md5.c.o /usr/bin/ranlib ../../lib/libgromacs_mdrun_mpi_d.openmpi.a make[3]: Leaving directory '/<>/build/openmpi-dp' [100%] Built target libgromacs /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/depend make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/programs /<>/build/openmpi-dp/src/programs/CMakeFiles/mdrun.dir/DependInfo.cmake --color= Scanning dependencies of target mdrun make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/build make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/programs && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -fopenmp -o CMakeFiles/mdrun.dir/mdrun_main.cpp.o -c /<>/src/programs/mdrun_main.cpp cd /<>/build/openmpi-dp/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrun.dir/mdrun_main.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/md.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/membed.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/repl_ex.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/runner.cpp.o -o ../../bin/mdrun_mpi_d.openmpi ../../lib/libgromacs_mdrun_mpi_d.openmpi.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[3]: Leaving directory '/<>/build/openmpi-dp' [100%] Built target mdrun make[2]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi-dp/CMakeFiles 0 make[1]: Leaving directory '/<>/build/openmpi-dp' sed -e 's/#MPIABBR#/openmpi/g' -e 's/#MPIPROG#/OpenMPI/g' \ < debian/gromacs-parallel.README.Debian.in \ > debian/gromacs-openmpi.README.Debian # above ifeq..linux: See https://bugs.debian.org/839387 for background, # seems to have a specific non-fakeroot failure on hurd/kfreebsd as well? # OMPI...: See https://bugs.debian.org/494046 LD_LIBRARY_PATH=/<>/build/openmpi/lib OMPI_MCA_plm_rsh_agent=/bin/false /usr/bin/make -j4 -C build/openmpi check make[1]: Entering directory '/<>/build/openmpi' /usr/bin/cmake -H/<> -B/<>/build/openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/make -f CMakeFiles/Makefile2 check make[2]: Entering directory '/<>/build/openmpi' /usr/bin/cmake -H/<> -B/<>/build/openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi/CMakeFiles 98 /usr/bin/make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all make[3]: Entering directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/depend /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/onlinehelp/tests /<>/build/openmpi/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/external/gmock-1.7.0 /<>/build/openmpi /<>/build/openmpi/src/external/gmock-1.7.0 /<>/build/openmpi/src/external/gmock-1.7.0/CMakeFiles/gmock.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/openmpi' make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/mdrunutility/tests /<>/build/openmpi/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake --color= cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi /<>/build/openmpi/src/gromacs /<>/build/openmpi/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[4]: Entering directory '/<>/build/openmpi' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[4]: Leaving directory '/<>/build/openmpi' Scanning dependencies of target onlinehelp-test-shared Scanning dependencies of target gmock make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build Scanning dependencies of target mdrunutility-test-shared make[4]: Leaving directory '/<>/build/openmpi' make[4]: Entering directory '/<>/build/openmpi' make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /<>/src/gromacs/onlinehelp/tests/mock_helptopic.cpp cd /<>/build/openmpi/src/external/gmock-1.7.0 && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /<>/src/external/gmock-1.7.0/src/gmock-all.cc /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp [ 3%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi /<>/build/openmpi/src/gromacs /<>/build/openmpi/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[4]: Entering directory '/<>/build/openmpi' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[4]: Leaving directory '/<>/build/openmpi' [ 80%] Built target libgromacs cd /<>/build/openmpi/src/external/gmock-1.7.0 && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -Wno-unused-variable -o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o -c /<>/src/external/gmock-1.7.0/gtest/src/gtest-all.cc make[4]: Leaving directory '/<>/build/openmpi' make[4]: Leaving directory '/<>/build/openmpi' [ 81%] Built target mdrunutility-test-shared [ 81%] Built target onlinehelp-test-shared cd /<>/build/openmpi/src/external/gmock-1.7.0 && /usr/bin/cmake -P CMakeFiles/gmock.dir/cmake_clean_target.cmake cd /<>/build/openmpi/src/external/gmock-1.7.0 && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libgmock.a CMakeFiles/gmock.dir/src/gmock-all.cc.o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o /usr/bin/ranlib ../../../lib/libgmock.a make[4]: Leaving directory '/<>/build/openmpi' [ 81%] Built target gmock /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils /<>/build/openmpi /<>/build/openmpi/src/testutils /<>/build/openmpi/src/testutils/CMakeFiles/testutils.dir/DependInfo.cmake --color= Scanning dependencies of target testutils make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/cmdlinetest.cpp.o -c /<>/src/testutils/cmdlinetest.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/conftest.cpp.o -c /<>/src/testutils/conftest.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/filematchers.cpp.o -c /<>/src/testutils/filematchers.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/interactivetest.cpp.o -c /<>/src/testutils/interactivetest.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/loggertest.cpp.o -c /<>/src/testutils/loggertest.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpi-printer.cpp.o -c /<>/src/testutils/mpi-printer.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /<>/src/testutils/mpitest.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata.cpp.o -c /<>/src/testutils/refdata.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata-xml.cpp.o -c /<>/src/testutils/refdata-xml.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stdiohelper.cpp.o -c /<>/src/testutils/stdiohelper.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stringtest.cpp.o -c /<>/src/testutils/stringtest.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testasserts.cpp.o -c /<>/src/testutils/testasserts.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfilemanager.cpp.o -c /<>/src/testutils/testfilemanager.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfileredirector.cpp.o -c /<>/src/testutils/testfileredirector.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testinit.cpp.o -c /<>/src/testutils/testinit.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testoptions.cpp.o -c /<>/src/testutils/testoptions.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/textblockmatchers.cpp.o -c /<>/src/testutils/textblockmatchers.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/xvgtest.cpp.o -c /<>/src/testutils/xvgtest.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o -c /<>/src/external/tinyxml2/tinyxml2.cpp cd /<>/build/openmpi/src/testutils && /usr/bin/cmake -P CMakeFiles/testutils.dir/cmake_clean_target.cmake cd /<>/build/openmpi/src/testutils && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils.dir/link.txt --verbose=1 /usr/bin/ar qc ../../lib/libtestutils.a CMakeFiles/testutils.dir/cmdlinetest.cpp.o CMakeFiles/testutils.dir/conftest.cpp.o CMakeFiles/testutils.dir/filematchers.cpp.o CMakeFiles/testutils.dir/interactivetest.cpp.o CMakeFiles/testutils.dir/loggertest.cpp.o CMakeFiles/testutils.dir/mpi-printer.cpp.o CMakeFiles/testutils.dir/mpitest.cpp.o CMakeFiles/testutils.dir/refdata.cpp.o CMakeFiles/testutils.dir/refdata-xml.cpp.o CMakeFiles/testutils.dir/stdiohelper.cpp.o CMakeFiles/testutils.dir/stringtest.cpp.o CMakeFiles/testutils.dir/testasserts.cpp.o CMakeFiles/testutils.dir/testfilemanager.cpp.o CMakeFiles/testutils.dir/testfileredirector.cpp.o CMakeFiles/testutils.dir/testinit.cpp.o CMakeFiles/testutils.dir/testoptions.cpp.o CMakeFiles/testutils.dir/textblockmatchers.cpp.o CMakeFiles/testutils.dir/xvgtest.cpp.o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o /usr/bin/ranlib ../../lib/libtestutils.a make[4]: Leaving directory '/<>/build/openmpi' [ 83%] Built target testutils /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/depend /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/compat/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/compat/tests /<>/build/openmpi/src/gromacs/compat/tests/CMakeFiles/compat-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/openmpi /<>/build/openmpi/src/testutils/tests /<>/build/openmpi/src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/openmpi /<>/build/openmpi/src/testutils/tests /<>/build/openmpi/src/testutils/tests/CMakeFiles/testutils-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdlib/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/mdlib/tests /<>/build/openmpi/src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/DependInfo.cmake --color= Scanning dependencies of target compat-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/compat/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/make_unique.cpp.o -c /<>/src/gromacs/compat/tests/make_unique.cpp Scanning dependencies of target testutils-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/build Scanning dependencies of target testutils-mpi-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build make[4]: Entering directory '/<>/build/openmpi' make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/interactivetest.cpp.o -c /<>/src/testutils/tests/interactivetest.cpp cd /<>/build/openmpi/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o -c /<>/src/testutils/tests/mpitest.cpp Scanning dependencies of target mdlib-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/tests/calc_verletbuf.cpp cd /<>/build/openmpi/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/compat/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-mpi-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-mpi-test ../../../lib/libtestutils.a ../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /<>/src/gromacs/mdlib/tests/settle.cpp cd /<>/build/openmpi/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/compat-test.dir/make_unique.cpp.o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/compat-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 84%] Built target testutils-mpi-test /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/applied-forces/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/applied-forces/tests /<>/build/openmpi/src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target applied-forces-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/applied-forces/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/electricfield.cpp.o -c /<>/src/gromacs/applied-forces/tests/electricfield.cpp make[4]: Leaving directory '/<>/build/openmpi' [ 84%] Built target compat-test cd /<>/build/openmpi/src/gromacs/applied-forces/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o -c /<>/src/testutils/tests/refdata_tests.cpp cd /<>/build/openmpi/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /<>/src/testutils/tests/testasserts_tests.cpp cd /<>/build/openmpi/src/gromacs/applied-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied-forces-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/applied-forces-test.dir/electricfield.cpp.o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/applied-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 84%] Built target applied-forces-test /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/listed-forces/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/listed-forces/tests /<>/build/openmpi/src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target listed-forces-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/listed-forces/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/bonded.cpp.o -c /<>/src/gromacs/listed-forces/tests/bonded.cpp cd /<>/build/openmpi/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -c /<>/src/testutils/tests/xvgtest_tests.cpp cd /<>/build/openmpi/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /<>/src/gromacs/mdlib/tests/shake.cpp cd /<>/build/openmpi/src/gromacs/listed-forces/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/listed-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed-forces-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/listed-forces-test.dir/bonded.cpp.o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/listed-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/commandline/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/commandline/tests /<>/build/openmpi/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake --color= cd /<>/build/openmpi/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-test.dir/interactivetest.cpp.o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-test ../../../lib/libtestutils.a ../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm Scanning dependencies of target commandline-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp make[4]: Leaving directory '/<>/build/openmpi' [ 85%] Built target listed-forces-test /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/ewald/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/ewald/tests /<>/build/openmpi/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake --color= Scanning dependencies of target ewald-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmebsplinetest.cpp make[4]: Leaving directory '/<>/build/openmpi' [ 85%] Built target testutils-test /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fft/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/fft/tests /<>/build/openmpi/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake --color= Scanning dependencies of target fft-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/fft/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/fft.cpp.o -c /<>/src/gromacs/fft/tests/fft.cpp cd /<>/build/openmpi/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /<>/src/gromacs/mdlib/tests/simulationsignal.cpp cd /<>/build/openmpi/src/gromacs/fft/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fft-test.dir/fft.cpp.o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fft-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /<>/src/gromacs/ewald/tests/pmegathertest.cpp make[4]: Leaving directory '/<>/build/openmpi' [ 85%] Built target fft-test /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gpu_utils/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/gpu_utils/tests /<>/build/openmpi/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake --color= Scanning dependencies of target gpu_utils-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/gputest.cpp.o -c /<>/src/gromacs/gpu_utils/tests/gputest.cpp cd /<>/build/openmpi/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp cd /<>/build/openmpi/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /<>/src/gromacs/gpu_utils/tests/hostallocator.cpp cd /<>/build/openmpi/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o CMakeFiles/mdlib-test.dir/settle.cpp.o CMakeFiles/mdlib-test.dir/shake.cpp.o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/mdlib-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 86%] Built target mdlib-test /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/hardware/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/hardware/tests /<>/build/openmpi/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake --color= Scanning dependencies of target hardware-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/hardware/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /<>/src/gromacs/hardware/tests/hardwaretopology.cpp cd /<>/build/openmpi/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp cd /<>/build/openmpi/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -c /<>/src/gromacs/gpu_utils/tests/devicetransfers.cpp cd /<>/build/openmpi/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/hardware/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesolvetest.cpp cd /<>/build/openmpi/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gpu_utils-test.dir/gputest.cpp.o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gpu_utils-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp cd /<>/build/openmpi/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/hardware-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 87%] Built target gpu_utils-test cd /<>/build/openmpi/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineparser.cpp make[4]: Leaving directory '/<>/build/openmpi' [ 87%] Built target hardware-test /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/math/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/math/tests /<>/build/openmpi/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake --color= Scanning dependencies of target math-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/math/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/functions.cpp.o -c /<>/src/gromacs/math/tests/functions.cpp cd /<>/build/openmpi/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp cd /<>/build/openmpi/src/gromacs/math/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/invertmatrix.cpp.o -c /<>/src/gromacs/math/tests/invertmatrix.cpp cd /<>/build/openmpi/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c /<>/src/gromacs/commandline/tests/pargs.cpp cd /<>/build/openmpi/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesplinespreadtest.cpp cd /<>/build/openmpi/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/math/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /<>/src/gromacs/math/tests/vectypes.cpp cd /<>/build/openmpi/src/gromacs/math/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/mdrunutility/tests /<>/build/openmpi/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity.cpp cd /<>/build/openmpi/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/math-test.dir/functions.cpp.o CMakeFiles/math-test.dir/invertmatrix.cpp.o CMakeFiles/math-test.dir/vectypes.cpp.o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/math-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o CMakeFiles/commandline-test.dir/pargs.cpp.o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o ../../onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/commandline-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 87%] Built target math-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/mdrunutility/tests /<>/build/openmpi/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-mpi-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity-mpi.cpp make[4]: Leaving directory '/<>/build/openmpi' [ 88%] Built target commandline-test /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/onlinehelp/tests /<>/build/openmpi/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake --color= Scanning dependencies of target onlinehelp-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpformat.cpp cd /<>/build/openmpi/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpmanager.cpp cd /<>/build/openmpi/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /<>/src/gromacs/ewald/tests/pmetestcommon.cpp cd /<>/build/openmpi/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-mpi-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 88%] Built target mdrunutility-test /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/options/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/options/tests /<>/build/openmpi/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake --color= Scanning dependencies of target options-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /<>/src/gromacs/options/tests/abstractoptionstorage.cpp make[4]: Leaving directory '/<>/build/openmpi' [ 88%] Built target mdrunutility-mpi-test /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/random/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/random/tests /<>/build/openmpi/src/gromacs/random/tests/CMakeFiles/random-test.dir/DependInfo.cmake --color= Scanning dependencies of target random-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -c /<>/src/gromacs/random/tests/exponentialdistribution.cpp cd /<>/build/openmpi/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpwritercontext.cpp cd /<>/build/openmpi/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o -c /<>/src/gromacs/ewald/tests/testhardwarecontexts.cpp cd /<>/build/openmpi/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /<>/src/gromacs/random/tests/gammadistribution.cpp cd /<>/build/openmpi/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/onlinehelp-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 89%] Built target onlinehelp-test /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/tables/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/tables/tests /<>/build/openmpi/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake --color= Scanning dependencies of target table-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 cd /<>/build/openmpi/src/gromacs/tables/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/splinetable.cpp.o -c /<>/src/gromacs/tables/tests/splinetable.cpp /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/ewald-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 90%] Built target ewald-test /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/taskassignment/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/taskassignment/tests /<>/build/openmpi/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake --color= Scanning dependencies of target taskassignment-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/taskassignment/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -c /<>/src/gromacs/taskassignment/tests/usergpuids.cpp cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /<>/src/gromacs/random/tests/normaldistribution.cpp cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /<>/src/gromacs/options/tests/filenameoption.cpp cd /<>/build/openmpi/src/gromacs/taskassignment/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/taskassignment-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 90%] Built target taskassignment-test cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -c /<>/src/gromacs/options/tests/filenameoptionmanager.cpp cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/seed.cpp.o -c /<>/src/gromacs/random/tests/seed.cpp cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/option.cpp.o -c /<>/src/gromacs/options/tests/option.cpp cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /<>/src/gromacs/random/tests/tabulatednormaldistribution.cpp cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /<>/src/gromacs/options/tests/optionsassigner.cpp cd /<>/build/openmpi/src/gromacs/tables/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /<>/src/gromacs/options/tests/repeatingsection.cpp cd /<>/build/openmpi/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/table-test.dir/splinetable.cpp.o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/table-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/threefry.cpp.o -c /<>/src/gromacs/random/tests/threefry.cpp make[4]: Leaving directory '/<>/build/openmpi' [ 91%] Built target table-test /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/utility/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/utility/tests /<>/build/openmpi/src/gromacs/utility/tests/CMakeFiles/utility-test.dir/DependInfo.cmake --color= Scanning dependencies of target utility-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/alignedallocator.cpp.o -c /<>/src/gromacs/utility/tests/alignedallocator.cpp cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /<>/src/gromacs/options/tests/timeunitmanager.cpp cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/treesupport.cpp.o -c /<>/src/gromacs/options/tests/treesupport.cpp cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformintdistribution.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/arrayref.cpp.o -c /<>/src/gromacs/utility/tests/arrayref.cpp cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformrealdistribution.cpp cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /<>/src/gromacs/utility/tests/bitmask32.cpp cd /<>/build/openmpi/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o CMakeFiles/options-test.dir/filenameoption.cpp.o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o CMakeFiles/options-test.dir/option.cpp.o CMakeFiles/options-test.dir/optionsassigner.cpp.o CMakeFiles/options-test.dir/repeatingsection.cpp.o CMakeFiles/options-test.dir/timeunitmanager.cpp.o CMakeFiles/options-test.dir/treesupport.cpp.o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/options-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 92%] Built target options-test /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fileio/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/fileio/tests /<>/build/openmpi/src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/DependInfo.cmake --color= Scanning dependencies of target fileio-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/fileio/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /<>/src/gromacs/fileio/tests/confio.cpp cd /<>/build/openmpi/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/random-test.dir/exponentialdistribution.cpp.o CMakeFiles/random-test.dir/gammadistribution.cpp.o CMakeFiles/random-test.dir/normaldistribution.cpp.o CMakeFiles/random-test.dir/seed.cpp.o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o CMakeFiles/random-test.dir/threefry.cpp.o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/random-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 94%] Built target random-test /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/pulling/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/pulling/tests /<>/build/openmpi/src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/DependInfo.cmake --color= Scanning dependencies of target pull-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/pulling/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/pull.cpp.o -c /<>/src/gromacs/pulling/tests/pull.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask64.cpp.o -c /<>/src/gromacs/utility/tests/bitmask64.cpp cd /<>/build/openmpi/src/gromacs/pulling/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/fileio/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/readinp.cpp.o -c /<>/src/gromacs/fileio/tests/readinp.cpp cd /<>/build/openmpi/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/pull-test.dir/pull.cpp.o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/pull-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 94%] Built target pull-test /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/awh/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/awh/tests /<>/build/openmpi/src/gromacs/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake --color= Scanning dependencies of target awh-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/awh/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/bias.cpp.o -c /<>/src/gromacs/awh/tests/bias.cpp cd /<>/build/openmpi/src/gromacs/fileio/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /<>/src/gromacs/fileio/tests/tngio.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /<>/src/gromacs/utility/tests/bitmask128.cpp cd /<>/build/openmpi/src/gromacs/fileio/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fileio-test.dir/confio.cpp.o CMakeFiles/fileio-test.dir/readinp.cpp.o CMakeFiles/fileio-test.dir/tngio.cpp.o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fileio-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 95%] Built target fileio-test /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/simd/tests /<>/build/openmpi /<>/build/openmpi/src/gromacs/simd/tests /<>/build/openmpi/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake --color= Scanning dependencies of target simd-test make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /<>/src/gromacs/simd/tests/bootstrap_loadstore.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreeserializer.cpp cd /<>/build/openmpi/src/gromacs/awh/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /<>/src/gromacs/awh/tests/biasstate.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/base.cpp.o -c /<>/src/gromacs/simd/tests/base.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreetransform.cpp cd /<>/build/openmpi/src/gromacs/awh/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/grid.cpp.o -c /<>/src/gromacs/awh/tests/grid.cpp cd /<>/build/openmpi/src/gromacs/awh/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/data.cpp.o -c /<>/src/gromacs/simd/tests/data.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd.cpp.o -c /<>/src/gromacs/simd/tests/simd.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint.cpp cd /<>/build/openmpi/src/gromacs/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/awh-test.dir/bias.cpp.o CMakeFiles/awh-test.dir/biasstate.cpp.o CMakeFiles/awh-test.dir/grid.cpp.o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/awh-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 95%] Built target awh-test cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/logger.cpp.o -c /<>/src/gromacs/utility/tests/logger.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/mutex.cpp.o -c /<>/src/gromacs/utility/tests/mutex.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint_util.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd_vector_operations.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/path.cpp.o -c /<>/src/gromacs/utility/tests/path.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /<>/src/gromacs/simd/tests/simd_math.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /<>/src/gromacs/utility/tests/stringutil.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /<>/src/gromacs/utility/tests/textreader.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_memory.cpp.o -c /<>/src/gromacs/simd/tests/simd_memory.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_integer.cpp.o -c /<>/src/gromacs/simd/tests/simd_integer.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /<>/src/gromacs/utility/tests/textwriter.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /<>/src/gromacs/simd/tests/simd4.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /<>/src/gromacs/utility/tests/typetraits.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd4_floatingpoint.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd4_vector_operations.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /<>/src/gromacs/simd/tests/simd4_math.cpp cd /<>/build/openmpi/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/utility-test.dir/alignedallocator.cpp.o CMakeFiles/utility-test.dir/arrayref.cpp.o CMakeFiles/utility-test.dir/bitmask32.cpp.o CMakeFiles/utility-test.dir/bitmask64.cpp.o CMakeFiles/utility-test.dir/bitmask128.cpp.o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o CMakeFiles/utility-test.dir/logger.cpp.o CMakeFiles/utility-test.dir/mutex.cpp.o CMakeFiles/utility-test.dir/path.cpp.o CMakeFiles/utility-test.dir/stringutil.cpp.o CMakeFiles/utility-test.dir/textreader.cpp.o CMakeFiles/utility-test.dir/textwriter.cpp.o CMakeFiles/utility-test.dir/typetraits.cpp.o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/utility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [ 97%] Built target utility-test cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /<>/src/gromacs/simd/tests/scalar.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /<>/src/gromacs/simd/tests/scalar_util.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /<>/src/gromacs/simd/tests/scalar_math.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o CMakeFiles/simd-test.dir/base.cpp.o CMakeFiles/simd-test.dir/data.cpp.o CMakeFiles/simd-test.dir/simd.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd_math.cpp.o CMakeFiles/simd-test.dir/simd_memory.cpp.o CMakeFiles/simd-test.dir/simd_integer.cpp.o CMakeFiles/simd-test.dir/simd4.cpp.o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd4_math.cpp.o CMakeFiles/simd-test.dir/scalar.cpp.o CMakeFiles/simd-test.dir/scalar_util.cpp.o CMakeFiles/simd-test.dir/scalar_math.cpp.o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/simd-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3f.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi' [100%] Built target simd-test /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/openmpi /<>/build/openmpi /<>/build/openmpi/CMakeFiles/tests.dir/DependInfo.cmake --color= Scanning dependencies of target tests make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build make[4]: Entering directory '/<>/build/openmpi' make[4]: Nothing to be done for 'CMakeFiles/tests.dir/build'. make[4]: Leaving directory '/<>/build/openmpi' [100%] Built target tests /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/openmpi /<>/build/openmpi /<>/build/openmpi/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake --color= Scanning dependencies of target run-ctest-nophys make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build make[4]: Entering directory '/<>/build/openmpi' /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /<>/build/openmpi Start 1: TestUtilsUnitTests 1/24 Test #1: TestUtilsUnitTests ............... Passed 0.15 sec Start 2: TestUtilsMpiUnitTests 2/24 Test #2: TestUtilsMpiUnitTests ............ Passed 0.13 sec Start 3: MdlibUnitTest 3/24 Test #3: MdlibUnitTest .................... Passed 0.12 sec Start 4: AppliedForcesUnitTest 4/24 Test #4: AppliedForcesUnitTest ............ Passed 0.11 sec Start 5: ListedForcesTest 5/24 Test #5: ListedForcesTest ................. Passed 0.11 sec Start 6: CommandLineUnitTests 6/24 Test #6: CommandLineUnitTests ............. Passed 0.13 sec Start 7: EwaldUnitTests 7/24 Test #7: EwaldUnitTests ................... Passed 0.70 sec Start 8: FFTUnitTests 8/24 Test #8: FFTUnitTests ..................... Passed 0.21 sec Start 9: GpuUtilsUnitTests 9/24 Test #9: GpuUtilsUnitTests ................ Passed 0.14 sec Start 10: HardwareUnitTests 10/24 Test #10: HardwareUnitTests ................ Passed 0.13 sec Start 11: MathUnitTests 11/24 Test #11: MathUnitTests .................... Passed 0.12 sec Start 12: MdrunUtilityUnitTests 12/24 Test #12: MdrunUtilityUnitTests ............ Passed 0.12 sec Start 13: MdrunUtilityMpiUnitTests 13/24 Test #13: MdrunUtilityMpiUnitTests ......... Passed 0.17 sec Start 14: OnlineHelpUnitTests 14/24 Test #14: OnlineHelpUnitTests .............. Passed 0.11 sec Start 15: OptionsUnitTests 15/24 Test #15: OptionsUnitTests ................. Passed 0.12 sec Start 16: RandomUnitTests 16/24 Test #16: RandomUnitTests .................. Passed 0.15 sec Start 17: TableUnitTests 17/24 Test #17: TableUnitTests ................... Passed 0.55 sec Start 18: TaskAssignmentUnitTests 18/24 Test #18: TaskAssignmentUnitTests .......... Passed 0.18 sec Start 19: UtilityUnitTests 19/24 Test #19: UtilityUnitTests ................. Passed 0.21 sec Start 20: FileIOTests 20/24 Test #20: FileIOTests ...................... Passed 0.16 sec Start 21: PullTest 21/24 Test #21: PullTest ......................... Passed 0.12 sec Start 22: AwhTest 22/24 Test #22: AwhTest .......................... Passed 0.17 sec Start 23: SimdUnitTests 23/24 Test #23: SimdUnitTests .................... Passed 0.26 sec Start 24: CompatibilityHelpersTests 24/24 Test #24: CompatibilityHelpersTests ........ Passed 0.13 sec 100% tests passed, 0 tests failed out of 24 Label Time Summary: GTest = 4.50 sec (24 tests) MpiTest = 0.30 sec (2 tests) UnitTest = 4.50 sec (24 tests) Total Test time (real) = 4.55 sec make[4]: Leaving directory '/<>/build/openmpi' [100%] Built target run-ctest-nophys /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/tests /<>/build/openmpi /<>/build/openmpi/tests /<>/build/openmpi/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake --color= Scanning dependencies of target missing-tests-notice make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. make[4]: Leaving directory '/<>/build/openmpi' [100%] Built target missing-tests-notice /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend make[4]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/openmpi /<>/build/openmpi /<>/build/openmpi/CMakeFiles/check.dir/DependInfo.cmake --color= Scanning dependencies of target check make[4]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build make[4]: Entering directory '/<>/build/openmpi' make[4]: Nothing to be done for 'CMakeFiles/check.dir/build'. make[4]: Leaving directory '/<>/build/openmpi' [100%] Built target check make[3]: Leaving directory '/<>/build/openmpi' /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi/CMakeFiles 0 make[2]: Leaving directory '/<>/build/openmpi' make[1]: Leaving directory '/<>/build/openmpi' LD_LIBRARY_PATH=/<>/build/openmpi-dp/lib OMPI_MCA_plm_rsh_agent=/bin/false /usr/bin/make -j4 -C build/openmpi-dp check make[1]: Entering directory '/<>/build/openmpi-dp' /usr/bin/cmake -H/<> -B/<>/build/openmpi-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/make -f CMakeFiles/Makefile2 check make[2]: Entering directory '/<>/build/openmpi-dp' /usr/bin/cmake -H/<> -B/<>/build/openmpi-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi-dp/CMakeFiles 98 /usr/bin/make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all make[3]: Entering directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/depend /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs /<>/build/openmpi-dp/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/external/gmock-1.7.0 /<>/build/openmpi-dp /<>/build/openmpi-dp/src/external/gmock-1.7.0 /<>/build/openmpi-dp/src/external/gmock-1.7.0/CMakeFiles/gmock.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build Scanning dependencies of target onlinehelp-test-shared make[4]: Entering directory '/<>/build/openmpi-dp' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build make[4]: Leaving directory '/<>/build/openmpi-dp' Scanning dependencies of target mdrunutility-test-shared make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /<>/src/gromacs/onlinehelp/tests/mock_helptopic.cpp make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp Scanning dependencies of target gmock make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build.make src/external/gmock-1.7.0/CMakeFiles/gmock.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/external/gmock-1.7.0 && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /<>/src/external/gmock-1.7.0/src/gmock-all.cc [ 3%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs /<>/build/openmpi-dp/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' make[4]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[4]: Leaving directory '/<>/build/openmpi-dp' [ 80%] Built target libgromacs cd /<>/build/openmpi-dp/src/external/gmock-1.7.0 && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -D_GNU_SOURCE=1 -isystem /<>/src/external/gmock-1.7.0 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/gmock-1.7.0/gtest -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -Wno-unused-variable -o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o -c /<>/src/external/gmock-1.7.0/gtest/src/gtest-all.cc make[4]: Leaving directory '/<>/build/openmpi-dp' make[4]: Leaving directory '/<>/build/openmpi-dp' [ 80%] Built target onlinehelp-test-shared [ 81%] Built target mdrunutility-test-shared cd /<>/build/openmpi-dp/src/external/gmock-1.7.0 && /usr/bin/cmake -P CMakeFiles/gmock.dir/cmake_clean_target.cmake cd /<>/build/openmpi-dp/src/external/gmock-1.7.0 && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libgmock.a CMakeFiles/gmock.dir/src/gmock-all.cc.o CMakeFiles/gmock.dir/gtest/src/gtest-all.cc.o /usr/bin/ranlib ../../../lib/libgmock.a make[4]: Leaving directory '/<>/build/openmpi-dp' [ 81%] Built target gmock /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils /<>/build/openmpi-dp /<>/build/openmpi-dp/src/testutils /<>/build/openmpi-dp/src/testutils/CMakeFiles/testutils.dir/DependInfo.cmake --color= Scanning dependencies of target testutils make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/cmdlinetest.cpp.o -c /<>/src/testutils/cmdlinetest.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/conftest.cpp.o -c /<>/src/testutils/conftest.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/filematchers.cpp.o -c /<>/src/testutils/filematchers.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/interactivetest.cpp.o -c /<>/src/testutils/interactivetest.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/loggertest.cpp.o -c /<>/src/testutils/loggertest.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpi-printer.cpp.o -c /<>/src/testutils/mpi-printer.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /<>/src/testutils/mpitest.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata.cpp.o -c /<>/src/testutils/refdata.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/refdata-xml.cpp.o -c /<>/src/testutils/refdata-xml.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stdiohelper.cpp.o -c /<>/src/testutils/stdiohelper.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/stringtest.cpp.o -c /<>/src/testutils/stringtest.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testasserts.cpp.o -c /<>/src/testutils/testasserts.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfilemanager.cpp.o -c /<>/src/testutils/testfilemanager.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testfileredirector.cpp.o -c /<>/src/testutils/testfileredirector.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testinit.cpp.o -c /<>/src/testutils/testinit.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/testoptions.cpp.o -c /<>/src/testutils/testoptions.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/textblockmatchers.cpp.o -c /<>/src/testutils/textblockmatchers.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/xvgtest.cpp.o -c /<>/src/testutils/xvgtest.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -isystem /<>/src/testutils/../external/tinyxml2 -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o -c /<>/src/external/tinyxml2/tinyxml2.cpp cd /<>/build/openmpi-dp/src/testutils && /usr/bin/cmake -P CMakeFiles/testutils.dir/cmake_clean_target.cmake cd /<>/build/openmpi-dp/src/testutils && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils.dir/link.txt --verbose=1 /usr/bin/ar qc ../../lib/libtestutils.a CMakeFiles/testutils.dir/cmdlinetest.cpp.o CMakeFiles/testutils.dir/conftest.cpp.o CMakeFiles/testutils.dir/filematchers.cpp.o CMakeFiles/testutils.dir/interactivetest.cpp.o CMakeFiles/testutils.dir/loggertest.cpp.o CMakeFiles/testutils.dir/mpi-printer.cpp.o CMakeFiles/testutils.dir/mpitest.cpp.o CMakeFiles/testutils.dir/refdata.cpp.o CMakeFiles/testutils.dir/refdata-xml.cpp.o CMakeFiles/testutils.dir/stdiohelper.cpp.o CMakeFiles/testutils.dir/stringtest.cpp.o CMakeFiles/testutils.dir/testasserts.cpp.o CMakeFiles/testutils.dir/testfilemanager.cpp.o CMakeFiles/testutils.dir/testfileredirector.cpp.o CMakeFiles/testutils.dir/testinit.cpp.o CMakeFiles/testutils.dir/testoptions.cpp.o CMakeFiles/testutils.dir/textblockmatchers.cpp.o CMakeFiles/testutils.dir/xvgtest.cpp.o CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o /usr/bin/ranlib ../../lib/libtestutils.a make[4]: Leaving directory '/<>/build/openmpi-dp' [ 83%] Built target testutils /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/depend /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/compat/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/compat/tests /<>/build/openmpi-dp/src/gromacs/compat/tests/CMakeFiles/compat-test.dir/DependInfo.cmake --color= cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/testutils/tests /<>/build/openmpi-dp/src/testutils/tests/CMakeFiles/testutils-test.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/testutils/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/testutils/tests /<>/build/openmpi-dp/src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/DependInfo.cmake --color= /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdlib/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/mdlib/tests /<>/build/openmpi-dp/src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/DependInfo.cmake --color= Scanning dependencies of target testutils-mpi-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o -c /<>/src/testutils/tests/mpitest.cpp Scanning dependencies of target compat-test Scanning dependencies of target testutils-test make[4]: Leaving directory '/<>/build/openmpi-dp' make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build /usr/bin/make -f src/testutils/tests/CMakeFiles/testutils-test.dir/build.make src/testutils/tests/CMakeFiles/testutils-test.dir/build Scanning dependencies of target mdlib-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/interactivetest.cpp.o -c /<>/src/testutils/tests/interactivetest.cpp make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/compat/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/make_unique.cpp.o -c /<>/src/gromacs/compat/tests/make_unique.cpp make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /<>/src/gromacs/mdlib/tests/calc_verletbuf.cpp cd /<>/build/openmpi-dp/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/compat/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/compat/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/external/lmfit -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /<>/src/gromacs/mdlib/tests/settle.cpp cd /<>/build/openmpi-dp/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-mpi-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-mpi-test ../../../lib/libtestutils.a ../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi-dp/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/compat-test.dir/make_unique.cpp.o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/compat-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 84%] Built target testutils-mpi-test /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/applied-forces/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/applied-forces/tests /<>/build/openmpi-dp/src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target applied-forces-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build.make src/gromacs/applied-forces/tests/CMakeFiles/applied-forces-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/applied-forces/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/electricfield.cpp.o -c /<>/src/gromacs/applied-forces/tests/electricfield.cpp make[4]: Leaving directory '/<>/build/openmpi-dp' [ 84%] Built target compat-test /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/listed-forces/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/listed-forces/tests /<>/build/openmpi-dp/src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/DependInfo.cmake --color= Scanning dependencies of target listed-forces-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build.make src/gromacs/listed-forces/tests/CMakeFiles/listed-forces-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/listed-forces/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/bonded.cpp.o -c /<>/src/gromacs/listed-forces/tests/bonded.cpp cd /<>/build/openmpi-dp/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o -c /<>/src/testutils/tests/refdata_tests.cpp cd /<>/build/openmpi-dp/src/gromacs/listed-forces/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/listed-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/listed-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed-forces-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/listed-forces-test.dir/bonded.cpp.o CMakeFiles/listed-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/listed-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi-dp/src/gromacs/applied-forces/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied-forces/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/applied-forces/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp make[4]: Leaving directory '/<>/build/openmpi-dp' [ 85%] Built target listed-forces-test /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/commandline/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/commandline/tests /<>/build/openmpi-dp/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake --color= Scanning dependencies of target commandline-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp cd /<>/build/openmpi-dp/src/gromacs/applied-forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied-forces-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/applied-forces-test.dir/electricfield.cpp.o CMakeFiles/applied-forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/applied-forces-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 85%] Built target applied-forces-test /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/ewald/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/ewald/tests /<>/build/openmpi-dp/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake --color= Scanning dependencies of target ewald-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmebsplinetest.cpp cd /<>/build/openmpi-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /<>/src/gromacs/mdlib/tests/shake.cpp cd /<>/build/openmpi-dp/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /<>/src/testutils/tests/testasserts_tests.cpp cd /<>/build/openmpi-dp/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -c /<>/src/testutils/tests/xvgtest_tests.cpp cd /<>/build/openmpi-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp cd /<>/build/openmpi-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /<>/src/gromacs/mdlib/tests/simulationsignal.cpp cd /<>/build/openmpi-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /<>/src/gromacs/ewald/tests/pmegathertest.cpp cd /<>/build/openmpi-dp/src/testutils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/testutils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -isystem /<>/src/testutils/../external/tinyxml2 -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp cd /<>/build/openmpi-dp/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/testutils-test.dir/interactivetest.cpp.o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -o ../../../bin/testutils-test ../../../lib/libtestutils.a ../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 85%] Built target testutils-test /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fft/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/fft/tests /<>/build/openmpi-dp/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake --color= Scanning dependencies of target fft-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/fft/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/fft.cpp.o -c /<>/src/gromacs/fft/tests/fft.cpp cd /<>/build/openmpi-dp/src/gromacs/mdlib/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/mdlib/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o CMakeFiles/mdlib-test.dir/settle.cpp.o CMakeFiles/mdlib-test.dir/shake.cpp.o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/mdlib-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 86%] Built target mdlib-test /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/gpu_utils/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/gpu_utils/tests /<>/build/openmpi-dp/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake --color= Scanning dependencies of target gpu_utils-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/gputest.cpp.o -c /<>/src/gromacs/gpu_utils/tests/gputest.cpp cd /<>/build/openmpi-dp/src/gromacs/fft/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/fft/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /<>/src/gromacs/gpu_utils/tests/hostallocator.cpp cd /<>/build/openmpi-dp/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fft-test.dir/fft.cpp.o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fft-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 86%] Built target fft-test /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/hardware/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/hardware/tests /<>/build/openmpi-dp/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake --color= Scanning dependencies of target hardware-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/hardware/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /<>/src/gromacs/hardware/tests/hardwaretopology.cpp cd /<>/build/openmpi-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp cd /<>/build/openmpi-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesolvetest.cpp cd /<>/build/openmpi-dp/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -c /<>/src/gromacs/gpu_utils/tests/devicetransfers.cpp cd /<>/build/openmpi-dp/src/gromacs/gpu_utils/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/gpu_utils/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/hardware/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/hardware/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/gpu_utils-test.dir/gputest.cpp.o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/gpu_utils-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 87%] Built target gpu_utils-test /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/math/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/math/tests /<>/build/openmpi-dp/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake --color= Scanning dependencies of target math-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/math/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/functions.cpp.o -c /<>/src/gromacs/math/tests/functions.cpp cd /<>/build/openmpi-dp/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/hardware-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineparser.cpp make[4]: Leaving directory '/<>/build/openmpi-dp' [ 87%] Built target hardware-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity.cpp cd /<>/build/openmpi-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /<>/src/gromacs/ewald/tests/pmesplinespreadtest.cpp cd /<>/build/openmpi-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /<>/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp cd /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/math/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/invertmatrix.cpp.o -c /<>/src/gromacs/math/tests/invertmatrix.cpp cd /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 87%] Built target mdrunutility-test /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/mdrunutility/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake --color= Scanning dependencies of target mdrunutility-mpi-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o -c /<>/src/gromacs/mdrunutility/tests/threadaffinity-mpi.cpp cd /<>/build/openmpi-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c /<>/src/gromacs/commandline/tests/pargs.cpp cd /<>/build/openmpi-dp/src/gromacs/math/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /<>/src/gromacs/math/tests/vectypes.cpp cd /<>/build/openmpi-dp/src/gromacs/math/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/math/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /<>/src/gromacs/ewald/tests/pmetestcommon.cpp cd /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/math-test.dir/functions.cpp.o CMakeFiles/math-test.dir/invertmatrix.cpp.o CMakeFiles/math-test.dir/vectypes.cpp.o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/math-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 87%] Built target math-test /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/onlinehelp/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake --color= Scanning dependencies of target onlinehelp-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpformat.cpp cd /<>/build/openmpi-dp/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity-mpi.cpp.o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -o ../../../../bin/mdrunutility-mpi-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi-dp/src/gromacs/commandline/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/commandline/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp make[4]: Leaving directory '/<>/build/openmpi-dp' [ 87%] Built target mdrunutility-mpi-test /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/options/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/options/tests /<>/build/openmpi-dp/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake --color= Scanning dependencies of target options-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /<>/src/gromacs/options/tests/abstractoptionstorage.cpp cd /<>/build/openmpi-dp/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o CMakeFiles/commandline-test.dir/pargs.cpp.o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o ../../onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/commandline-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o -c /<>/src/gromacs/ewald/tests/testhardwarecontexts.cpp cd /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpmanager.cpp make[4]: Leaving directory '/<>/build/openmpi-dp' [ 88%] Built target commandline-test /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/random/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/random/tests /<>/build/openmpi-dp/src/gromacs/random/tests/CMakeFiles/random-test.dir/DependInfo.cmake --color= Scanning dependencies of target random-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -c /<>/src/gromacs/random/tests/exponentialdistribution.cpp cd /<>/build/openmpi-dp/src/gromacs/ewald/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o CMakeFiles/ewald-test.dir/testhardwarecontexts.cpp.o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/ewald-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 89%] Built target ewald-test /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/tables/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/tables/tests /<>/build/openmpi-dp/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake --color= Scanning dependencies of target table-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/tables/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/splinetable.cpp.o -c /<>/src/gromacs/tables/tests/splinetable.cpp cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /<>/src/gromacs/random/tests/gammadistribution.cpp cd /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /<>/src/gromacs/onlinehelp/tests/helpwritercontext.cpp cd /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/onlinehelp/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -o ../../../../bin/onlinehelp-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 90%] Built target onlinehelp-test /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/taskassignment/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/taskassignment/tests /<>/build/openmpi-dp/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake --color= Scanning dependencies of target taskassignment-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/taskassignment/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -c /<>/src/gromacs/taskassignment/tests/usergpuids.cpp cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /<>/src/gromacs/random/tests/normaldistribution.cpp cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /<>/src/gromacs/options/tests/filenameoption.cpp cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/seed.cpp.o -c /<>/src/gromacs/random/tests/seed.cpp cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -c /<>/src/gromacs/options/tests/filenameoptionmanager.cpp cd /<>/build/openmpi-dp/src/gromacs/taskassignment/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/taskassignment/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /<>/src/gromacs/random/tests/tabulatednormaldistribution.cpp cd /<>/build/openmpi-dp/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/taskassignment-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 90%] Built target taskassignment-test /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/utility/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/utility/tests /<>/build/openmpi-dp/src/gromacs/utility/tests/CMakeFiles/utility-test.dir/DependInfo.cmake --color= Scanning dependencies of target utility-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/alignedallocator.cpp.o -c /<>/src/gromacs/utility/tests/alignedallocator.cpp cd /<>/build/openmpi-dp/src/gromacs/tables/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/tables/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/table-test.dir/splinetable.cpp.o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/table-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 91%] Built target table-test /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/fileio/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/fileio/tests /<>/build/openmpi-dp/src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/DependInfo.cmake --color= Scanning dependencies of target fileio-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/fileio/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /<>/src/gromacs/fileio/tests/confio.cpp cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/option.cpp.o -c /<>/src/gromacs/options/tests/option.cpp cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/threefry.cpp.o -c /<>/src/gromacs/random/tests/threefry.cpp cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /<>/src/gromacs/options/tests/optionsassigner.cpp cd /<>/build/openmpi-dp/src/gromacs/fileio/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/readinp.cpp.o -c /<>/src/gromacs/fileio/tests/readinp.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/arrayref.cpp.o -c /<>/src/gromacs/utility/tests/arrayref.cpp cd /<>/build/openmpi-dp/src/gromacs/fileio/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /<>/src/gromacs/fileio/tests/tngio.cpp cd /<>/build/openmpi-dp/src/gromacs/fileio/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/fileio/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformintdistribution.cpp cd /<>/build/openmpi-dp/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/fileio-test.dir/confio.cpp.o CMakeFiles/fileio-test.dir/readinp.cpp.o CMakeFiles/fileio-test.dir/tngio.cpp.o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/fileio-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 92%] Built target fileio-test /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/pulling/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/pulling/tests /<>/build/openmpi-dp/src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/DependInfo.cmake --color= Scanning dependencies of target pull-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/pulling/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/pull.cpp.o -c /<>/src/gromacs/pulling/tests/pull.cpp cd /<>/build/openmpi-dp/src/gromacs/pulling/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/pulling/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /<>/src/gromacs/random/tests/uniformrealdistribution.cpp cd /<>/build/openmpi-dp/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/pull-test.dir/pull.cpp.o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/pull-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 92%] Built target pull-test /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/awh/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/awh/tests /<>/build/openmpi-dp/src/gromacs/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake --color= Scanning dependencies of target awh-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/awh/tests/CMakeFiles/awh-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/awh/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/bias.cpp.o -c /<>/src/gromacs/awh/tests/bias.cpp cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /<>/src/gromacs/options/tests/repeatingsection.cpp cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/random/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/random-test.dir/exponentialdistribution.cpp.o CMakeFiles/random-test.dir/gammadistribution.cpp.o CMakeFiles/random-test.dir/normaldistribution.cpp.o CMakeFiles/random-test.dir/seed.cpp.o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o CMakeFiles/random-test.dir/threefry.cpp.o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/random-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 94%] Built target random-test /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs/simd/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs/simd/tests /<>/build/openmpi-dp/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake --color= Scanning dependencies of target simd-test make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /<>/src/gromacs/simd/tests/bootstrap_loadstore.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/base.cpp.o -c /<>/src/gromacs/simd/tests/base.cpp cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /<>/src/gromacs/options/tests/timeunitmanager.cpp cd /<>/build/openmpi-dp/src/gromacs/awh/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /<>/src/gromacs/awh/tests/biasstate.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/data.cpp.o -c /<>/src/gromacs/simd/tests/data.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd.cpp.o -c /<>/src/gromacs/simd/tests/simd.cpp cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/treesupport.cpp.o -c /<>/src/gromacs/options/tests/treesupport.cpp cd /<>/build/openmpi-dp/src/gromacs/awh/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/grid.cpp.o -c /<>/src/gromacs/awh/tests/grid.cpp cd /<>/build/openmpi-dp/src/gromacs/awh/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/awh/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/awh/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /<>/src/gromacs/utility/tests/bitmask32.cpp cd /<>/build/openmpi-dp/src/gromacs/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/awh-test.dir/bias.cpp.o CMakeFiles/awh-test.dir/biasstate.cpp.o CMakeFiles/awh-test.dir/grid.cpp.o CMakeFiles/awh-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/awh-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 94%] Built target awh-test cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask64.cpp.o -c /<>/src/gromacs/utility/tests/bitmask64.cpp cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/options/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /<>/src/gromacs/utility/tests/bitmask128.cpp cd /<>/build/openmpi-dp/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o CMakeFiles/options-test.dir/filenameoption.cpp.o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o CMakeFiles/options-test.dir/option.cpp.o CMakeFiles/options-test.dir/optionsassigner.cpp.o CMakeFiles/options-test.dir/repeatingsection.cpp.o CMakeFiles/options-test.dir/timeunitmanager.cpp.o CMakeFiles/options-test.dir/treesupport.cpp.o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/options-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /<>/src/gromacs/simd/tests/simd_floatingpoint_util.cpp make[4]: Leaving directory '/<>/build/openmpi-dp' [ 95%] Built target options-test cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd_vector_operations.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreeserializer.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /<>/src/gromacs/simd/tests/simd_math.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /<>/src/gromacs/utility/tests/keyvaluetreetransform.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/logger.cpp.o -c /<>/src/gromacs/utility/tests/logger.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/mutex.cpp.o -c /<>/src/gromacs/utility/tests/mutex.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_memory.cpp.o -c /<>/src/gromacs/simd/tests/simd_memory.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd_integer.cpp.o -c /<>/src/gromacs/simd/tests/simd_integer.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/path.cpp.o -c /<>/src/gromacs/utility/tests/path.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /<>/src/gromacs/utility/tests/stringutil.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /<>/src/gromacs/simd/tests/simd4.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /<>/src/gromacs/utility/tests/textreader.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -c /<>/src/gromacs/simd/tests/simd4_floatingpoint.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /<>/src/gromacs/simd/tests/simd4_vector_operations.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /<>/src/gromacs/simd/tests/simd4_math.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /<>/src/gromacs/simd/tests/scalar.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /<>/src/gromacs/simd/tests/scalar_util.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /<>/src/gromacs/simd/tests/scalar_math.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /<>/src/gromacs/utility/tests/textwriter.cpp cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/simd/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /<>/src/gromacs/utility/tests/typetraits.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/mpicxx.openmpi -DGMX_DOUBLE=1 -DGTEST_HAS_PTHREAD=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/<>/build/openmpi-dp/src/gromacs/utility/tests/Testing/Temporary\" -isystem /<>/src/external/gmock-1.7.0/gtest/include -isystem /<>/src/external/gmock-1.7.0/include -I/<>/build/openmpi-dp/src -isystem /<>/src/external/thread_mpi/include -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -Wno-unused-variable -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /<>/src/testutils/unittest_main.cpp cd /<>/build/openmpi-dp/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/utility-test.dir/alignedallocator.cpp.o CMakeFiles/utility-test.dir/arrayref.cpp.o CMakeFiles/utility-test.dir/bitmask32.cpp.o CMakeFiles/utility-test.dir/bitmask64.cpp.o CMakeFiles/utility-test.dir/bitmask128.cpp.o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o CMakeFiles/utility-test.dir/logger.cpp.o CMakeFiles/utility-test.dir/mutex.cpp.o CMakeFiles/utility-test.dir/path.cpp.o CMakeFiles/utility-test.dir/stringutil.cpp.o CMakeFiles/utility-test.dir/textreader.cpp.o CMakeFiles/utility-test.dir/textwriter.cpp.o CMakeFiles/utility-test.dir/typetraits.cpp.o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/utility-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [ 97%] Built target utility-test cd /<>/build/openmpi-dp/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/mpicxx.openmpi -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -funroll-all-loops -fexcess-precision=fast -L/usr/lib/openmpi/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o CMakeFiles/simd-test.dir/base.cpp.o CMakeFiles/simd-test.dir/data.cpp.o CMakeFiles/simd-test.dir/simd.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd_math.cpp.o CMakeFiles/simd-test.dir/simd_memory.cpp.o CMakeFiles/simd-test.dir/simd_integer.cpp.o CMakeFiles/simd-test.dir/simd4.cpp.o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o CMakeFiles/simd-test.dir/simd4_math.cpp.o CMakeFiles/simd-test.dir/scalar.cpp.o CMakeFiles/simd-test.dir/scalar_util.cpp.o CMakeFiles/simd-test.dir/scalar_math.cpp.o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -o ../../../../bin/simd-test ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mdrun_mpi_d.openmpi.a ../../../../lib/libgmock.a -fopenmp /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libhwloc.so -lrt /usr/lib/aarch64-linux-gnu/libfftw3.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/liblapack.so -lm make[4]: Leaving directory '/<>/build/openmpi-dp' [100%] Built target simd-test /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/openmpi-dp /<>/build/openmpi-dp /<>/build/openmpi-dp/CMakeFiles/tests.dir/DependInfo.cmake --color= Scanning dependencies of target tests make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' make[4]: Nothing to be done for 'CMakeFiles/tests.dir/build'. make[4]: Leaving directory '/<>/build/openmpi-dp' [100%] Built target tests /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/openmpi-dp /<>/build/openmpi-dp /<>/build/openmpi-dp/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake --color= Scanning dependencies of target run-ctest-nophys make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /<>/build/openmpi-dp Start 1: TestUtilsUnitTests 1/24 Test #1: TestUtilsUnitTests ............... Passed 0.16 sec Start 2: TestUtilsMpiUnitTests 2/24 Test #2: TestUtilsMpiUnitTests ............ Passed 0.13 sec Start 3: MdlibUnitTest 3/24 Test #3: MdlibUnitTest .................... Passed 0.11 sec Start 4: AppliedForcesUnitTest 4/24 Test #4: AppliedForcesUnitTest ............ Passed 0.10 sec Start 5: ListedForcesTest 5/24 Test #5: ListedForcesTest ................. Passed 0.10 sec Start 6: CommandLineUnitTests 6/24 Test #6: CommandLineUnitTests ............. Passed 0.12 sec Start 7: EwaldUnitTests 7/24 Test #7: EwaldUnitTests ................... Passed 0.59 sec Start 8: FFTUnitTests 8/24 Test #8: FFTUnitTests ..................... Passed 0.16 sec Start 9: GpuUtilsUnitTests 9/24 Test #9: GpuUtilsUnitTests ................ Passed 0.13 sec Start 10: HardwareUnitTests 10/24 Test #10: HardwareUnitTests ................ Passed 0.13 sec Start 11: MathUnitTests 11/24 Test #11: MathUnitTests .................... Passed 0.12 sec Start 12: MdrunUtilityUnitTests 12/24 Test #12: MdrunUtilityUnitTests ............ Passed 0.13 sec Start 13: MdrunUtilityMpiUnitTests 13/24 Test #13: MdrunUtilityMpiUnitTests ......... Passed 0.22 sec Start 14: OnlineHelpUnitTests 14/24 Test #14: OnlineHelpUnitTests .............. Passed 0.11 sec Start 15: OptionsUnitTests 15/24 Test #15: OptionsUnitTests ................. Passed 0.12 sec Start 16: RandomUnitTests 16/24 Test #16: RandomUnitTests .................. Passed 0.14 sec Start 17: TableUnitTests 17/24 Test #17: TableUnitTests ................... Passed 1.13 sec Start 18: TaskAssignmentUnitTests 18/24 Test #18: TaskAssignmentUnitTests .......... Passed 0.11 sec Start 19: UtilityUnitTests 19/24 Test #19: UtilityUnitTests ................. Passed 0.14 sec Start 20: FileIOTests 20/24 Test #20: FileIOTests ...................... Passed 0.13 sec Start 21: PullTest 21/24 Test #21: PullTest ......................... Passed 0.13 sec Start 22: AwhTest 22/24 Test #22: AwhTest .......................... Passed 0.12 sec Start 23: SimdUnitTests 23/24 Test #23: SimdUnitTests .................... Passed 0.21 sec Start 24: CompatibilityHelpersTests 24/24 Test #24: CompatibilityHelpersTests ........ Passed 0.12 sec 100% tests passed, 0 tests failed out of 24 Label Time Summary: GTest = 4.66 sec (24 tests) MpiTest = 0.35 sec (2 tests) UnitTest = 4.66 sec (24 tests) Total Test time (real) = 4.71 sec make[4]: Leaving directory '/<>/build/openmpi-dp' [100%] Built target run-ctest-nophys /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/tests /<>/build/openmpi-dp /<>/build/openmpi-dp/tests /<>/build/openmpi-dp/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake --color= Scanning dependencies of target missing-tests-notice make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. make[4]: Leaving directory '/<>/build/openmpi-dp' [100%] Built target missing-tests-notice /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend make[4]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build/openmpi-dp /<>/build/openmpi-dp /<>/build/openmpi-dp/CMakeFiles/check.dir/DependInfo.cmake --color= Scanning dependencies of target check make[4]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build make[4]: Entering directory '/<>/build/openmpi-dp' make[4]: Nothing to be done for 'CMakeFiles/check.dir/build'. make[4]: Leaving directory '/<>/build/openmpi-dp' [100%] Built target check make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi-dp/CMakeFiles 0 make[2]: Leaving directory '/<>/build/openmpi-dp' make[1]: Leaving directory '/<>/build/openmpi-dp' touch build-openmpi fakeroot debian/rules binary-arch dh_testdir dh_testroot dh_prep -pgromacs dh_installdirs -pgromacs /usr/bin/make -j4 -C build/basic install DESTDIR=/<>/debian/gromacs make[1]: Entering directory '/<>/build/basic' /usr/bin/cmake -H/<> -B/<>/build/basic --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/basic/CMakeFiles /<>/build/basic/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/basic' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/depend make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic /<>/build/basic/src/programs /<>/build/basic/src/programs/CMakeFiles/view_objlib.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic /<>/build/basic/src/programs/mdrun/tests /<>/build/basic/src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic /<>/build/basic/src/gromacs /<>/build/basic/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic /<>/build/basic/src/programs /<>/build/basic/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/basic' make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/build make[3]: Entering directory '/<>/build/basic' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[3]: Leaving directory '/<>/build/basic' make[3]: Entering directory '/<>/build/basic' make[3]: Nothing to be done for 'src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build'. make[3]: Leaving directory '/<>/build/basic' make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/basic' make[3]: Nothing to be done for 'src/programs/CMakeFiles/view_objlib.dir/build'. make[3]: Leaving directory '/<>/build/basic' [ 1%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend [ 1%] Built target mdrun_test_objlib make[3]: Entering directory '/<>/build/basic' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. make[3]: Leaving directory '/<>/build/basic' [ 2%] Built target view_objlib [ 2%] Built target mdrun_objlib make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic /<>/build/basic/src/gromacs /<>/build/basic/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/basic' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[3]: Leaving directory '/<>/build/basic' [ 98%] Built target libgromacs /usr/bin/make -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/depend /usr/bin/make -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/depend make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/share/template /<>/build/basic /<>/build/basic/share/template /<>/build/basic/share/template/CMakeFiles/template.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic' cd /<>/build/basic && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic /<>/build/basic/src/programs /<>/build/basic/src/programs/CMakeFiles/gmx.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/basic' make[3]: Leaving directory '/<>/build/basic' /usr/bin/make -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build /usr/bin/make -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/build make[3]: Entering directory '/<>/build/basic' make[3]: Nothing to be done for 'share/template/CMakeFiles/template.dir/build'. make[3]: Leaving directory '/<>/build/basic' make[3]: Entering directory '/<>/build/basic' make[3]: Nothing to be done for 'src/programs/CMakeFiles/gmx.dir/build'. make[3]: Leaving directory '/<>/build/basic' [100%] Built target template [100%] Built target gmx make[2]: Leaving directory '/<>/build/basic' /usr/bin/cmake -E cmake_progress_start /<>/build/basic/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/build/basic' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/build/basic' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /<>/debian/gromacs/usr/share/man/man1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-nmtraj.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-insert-molecules.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-grompp.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-mdmat.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-dyecoupl.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-dos.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-spol.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-eneconv.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-do_dssp.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-helix.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-nmr.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-lie.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-rms.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-mk_angndx.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-trajectory.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-covar.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-h2order.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-convert-tpr.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-freevolume.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-nmeig.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-chi.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-order.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-nmens.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-bar.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-disre.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-xpm2ps.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-rmsdist.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-anadock.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-make_edi.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-wheel.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-tune_pme.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-dielectric.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-saltbr.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-rmsf.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-velacc.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-distance.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-dipoles.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-hydorder.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-awh.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-help.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-pme_error.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-angle.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-genrestr.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-solvate.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-bundle.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-dyndom.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-wham.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-rotacf.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-mindist.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-polystat.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-gyrate.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-view.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-rotmat.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-clustsize.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-hbond.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-confrms.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-morph.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-analyze.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-saxs.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-sham.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-check.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-x2top.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-editconf.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-trjconv.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-cluster.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-potential.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-current.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-rama.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-enemat.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-genion.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-helixorient.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-sans.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-filter.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-spatial.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-density.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-sasa.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-sigeps.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-densorder.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-densmap.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-anaeig.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-genconf.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-trjorder.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-msd.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-trjcat.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-dump.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-energy.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-traj.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-principal.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-pairdist.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-make_ndx.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-vanhove.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-sorient.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-pdb2gmx.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-mdrun.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-rdf.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-tcaf.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-select.1 -- Installing: /<>/debian/gromacs/usr/share/man/man1/gmx-gangle.1 -- Installing: /<>/debian/gromacs/usr/share/gromacs/README.tutor -- Installing: /<>/debian/gromacs/usr/share/gromacs/README_FreeEnergyModifications.txt -- Installing: /<>/debian/gromacs/usr/share/gromacs/top -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/table6-12.xvg -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ffG53a5.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/dgsolv.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/atom_nom.tbl -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/atomname2type.n2t -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/ff_dum.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/phbres.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ss.map -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/random.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/table6-11.xvg -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/edissoc.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/atommass.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/sw.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ffG45a3.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/bonds.dlg -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/nsfactor.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/elements.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ca-shift.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/dna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/dna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/tip4pew.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/dna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/tip5p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/gbsa.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/rna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/rna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/urea.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/rna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/rna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/dna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/tip4p.gro -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/lipids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/tips3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/tip5p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/cmap.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/gb.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/lipids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ffnanonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ffnabonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/table6-9.xvg -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/specbond.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/residues.dtd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ffG53a6.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/dna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/dna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/tip4pew.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/dna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/tip5p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/gbsa.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/rna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/rna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/urea.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/rna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/rna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/dna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ffoplsaa.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/README -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/co-shift.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ha-shift.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/spc216.gro -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ps.m2p -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/residues.xml -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/flexwat-ferguson.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/dna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/dna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/tip4pew.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/dna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/tip5p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/gbsa.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/rna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/rna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/urea.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/rna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/rna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/dna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/flexspce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/ff_dum.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/surface.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/table6-8.xvg -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/vdw-msms.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/popc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/dppc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/ff_dum.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/tmcl.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/ethanol.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip4pew.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip5p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/gbsa.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/atomname2type.n2t -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/1propanol.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/methanol.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip5pe.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/vdwradii.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/defselection.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/dna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/dna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/tip4pew.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/dna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/tip5p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/gbsa.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/rna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/rna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/urea.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/rna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/rna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/dna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/dna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/dna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/tip4pew.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/dna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/tip5p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/gbsa.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/rna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/rna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/urea.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/rna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/rna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/dna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/sfactor.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/export.dlg -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/dna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/dna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/tip4pew.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/dna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/tip5p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/gbsa.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/rna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/rna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/urea.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/rna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/rna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/dna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/ff_dum.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ffG43a1.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ffoplsaa-n.tst -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/dna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/dna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/tip4pew.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/dna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/tip5p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/gbsa.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/rna.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/rna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/urea.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/rna.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/rna.arn -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/dna.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/refi_aa.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/xlateat.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/electroneg.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/tip5p.gro -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/ff_dum.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/methanol.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/methanol216.gro -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/ffG43a2.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/flexspc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/cb-shift.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/residuetypes.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/forcefield.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/tip3p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/ffnonbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/tip4p.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.c.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.hdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/atomtypes.atp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/spce.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/ff_dum.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/watermodels.dat -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/ffbonded.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.r2b -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.vsd -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/ions.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.rtp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/spc.itp -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/forcefield.doc -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.n.tdb -- Installing: /<>/debian/gromacs/usr/share/gromacs/top/table6-10.xvg -- Installing: /<>/debian/gromacs/usr/share/gromacs/template/CMakeLists.txt -- Installing: /<>/debian/gromacs/usr/share/gromacs/template/README -- Installing: /<>/debian/gromacs/usr/share/gromacs/template/template.cpp -- Installing: /<>/debian/gromacs/usr/share/gromacs/template/Makefile.pkg -- Installing: /<>/debian/gromacs/usr/share/gromacs/template/cmake/FindGROMACS.cmake -- Installing: /<>/debian/gromacs/usr/bin/GMXRC -- Installing: /<>/debian/gromacs/usr/bin/GMXRC.bash -- Installing: /<>/debian/gromacs/usr/bin/GMXRC.zsh -- Installing: /<>/debian/gromacs/usr/bin/GMXRC.csh -- Installing: /<>/debian/gromacs/usr/bin/demux.pl -- Installing: /<>/debian/gromacs/usr/bin/xplor2gmx.pl -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/random.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/trajectoryanalysis.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/version.h -- Installing: /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/libgromacs.so.3.0.0 -- Installing: /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/libgromacs.so.3 -- Installing: /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/libgromacs.so -- Installing: /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/pkgconfig/libgromacs.pc -- Installing: /<>/debian/gromacs/usr/share/cmake/gromacs/libgromacs.cmake -- Installing: /<>/debian/gromacs/usr/share/cmake/gromacs/libgromacs-release.cmake -- Installing: /<>/debian/gromacs/usr/share/cmake/gromacs/gromacs-config.cmake -- Installing: /<>/debian/gromacs/usr/share/cmake/gromacs/gromacs-config-version.cmake -- Installing: /<>/debian/gromacs/usr/include/gromacs/listed-forces/listed-forces.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlinehelpwriter.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlineinit.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlinemodule.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlineoptionsmodule.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlineparser.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlineprogramcontext.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline/filenm.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline/pargs.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/commandline/viewit.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fft/fft.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/gpu_utils/hostallocator.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/linearalgebra/eigensolver.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/linearalgebra/matrix.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/linearalgebra/sparsematrix.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/math/3dtransforms.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/math/do_fit.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/math/functions.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/math/gmxcomplex.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/math/units.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/math/utilities.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/math/vec.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/math/vectypes.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/math/paddedvector.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/mdtypes/inputrec.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/mdtypes/mdatom.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/mdtypes/md_enums.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/mdtypes/state.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/abstractoption.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/abstractsection.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/basicoptions.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/filenameoption.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/filenameoptionmanager.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/ioptionsbehavior.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/ioptionscontainer.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/ioptionscontainerwithsections.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/isectionstorage.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/ivaluestore.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/optionfiletype.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/optionflags.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/options.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/optionsection.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/repeatingsection.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/timeunitmanager.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/options/valuestore.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/pbcutil/ishift.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/pbcutil/pbc.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/pbcutil/rmpbc.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/random/exponentialdistribution.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/random/gammadistribution.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/random/normaldistribution.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/random/seed.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/random/tabulatednormaldistribution.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/random/threefry.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/random/uniformintdistribution.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/random/uniformrealdistribution.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/timing/wallcycle.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/timing/walltime_accounting.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/topology/atomprop.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/topology/atoms.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/topology/block.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/topology/idef.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/topology/index.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/topology/mtop_util.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/topology/symtab.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/topology/topology.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/trajectory/energy.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/trajectory/trajectoryframe.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/alignedallocator.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/allocator.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/arrayref.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/arraysize.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/basedefinitions.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/baseversion.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/classhelpers.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/cstringutil.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/current_function.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/datafilefinder.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/errorcodes.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/exceptions.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/fatalerror.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/flags.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/futil.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/gmxassert.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/init.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/programcontext.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/real.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/smalloc.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/utility/stringutil.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/confio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/enxio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/filetypes.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/gmxfio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/matio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/mtxio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/oenv.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/pdbio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/rgb.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/tpxio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/trrio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/trxio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/xdr_datatype.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/xtcio.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/fileio/xvgr.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/gmxana/gstat.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/abstractdata.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/analysisdata.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/arraydata.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/dataframe.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/datamodule.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/average.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/displacement.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/histogram.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/lifetime.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/plot.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection/nbsearch.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection/indexutil.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection/position.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection/selection.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection/selectioncollection.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection/selectionenums.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection/selectionoption.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection/selectionoptionbehavior.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/selection/selectionoptionmanager.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/trajectoryanalysis/analysismodule.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/trajectoryanalysis/analysissettings.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/trajectoryanalysis/cmdlinerunner.h -- Installing: /<>/debian/gromacs/usr/bin/gmx -- Up-to-date: /<>/debian/gromacs/usr/bin -- Installing: /<>/debian/gromacs/usr/bin/gmx-completion.bash -- Installing: /<>/debian/gromacs/usr/bin/gmx-completion-gmx.bash make[1]: Leaving directory '/<>/build/basic' /usr/bin/make -j4 -C build/basic-dp install DESTDIR=/<>/debian/gromacs make[1]: Entering directory '/<>/build/basic-dp' /usr/bin/cmake -H/<> -B/<>/build/basic-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/basic-dp/CMakeFiles /<>/build/basic-dp/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/depend make[3]: Entering directory '/<>/build/basic-dp' make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic-dp /<>/build/basic-dp/src/programs /<>/build/basic-dp/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic-dp /<>/build/basic-dp/src/gromacs /<>/build/basic-dp/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic-dp /<>/build/basic-dp/src/programs /<>/build/basic-dp/src/programs/CMakeFiles/view_objlib.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs/mdrun/tests /<>/build/basic-dp /<>/build/basic-dp/src/programs/mdrun/tests /<>/build/basic-dp/src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[3]: Entering directory '/<>/build/basic-dp' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[3]: Leaving directory '/<>/build/basic-dp' make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/build [ 1%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend make[3]: Entering directory '/<>/build/basic-dp' make[3]: Nothing to be done for 'src/programs/mdrun/tests/CMakeFiles/mdrun_test_objlib.dir/build'. make[3]: Leaving directory '/<>/build/basic-dp' make[3]: Entering directory '/<>/build/basic-dp' make[3]: Nothing to be done for 'src/programs/CMakeFiles/view_objlib.dir/build'. make[3]: Leaving directory '/<>/build/basic-dp' make[3]: Entering directory '/<>/build/basic-dp' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. make[3]: Leaving directory '/<>/build/basic-dp' [ 1%] Built target mdrun_test_objlib [ 1%] Built target mdrun_objlib [ 2%] Built target view_objlib make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/basic-dp /<>/build/basic-dp/src/gromacs /<>/build/basic-dp/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/basic-dp' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[3]: Leaving directory '/<>/build/basic-dp' [ 98%] Built target libgromacs /usr/bin/make -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/depend /usr/bin/make -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/depend make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/share/template /<>/build/basic-dp /<>/build/basic-dp/share/template /<>/build/basic-dp/share/template/CMakeFiles/template.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/basic-dp' cd /<>/build/basic-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/basic-dp /<>/build/basic-dp/src/programs /<>/build/basic-dp/src/programs/CMakeFiles/gmx.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build make[3]: Leaving directory '/<>/build/basic-dp' /usr/bin/make -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/build make[3]: Entering directory '/<>/build/basic-dp' make[3]: Nothing to be done for 'src/programs/CMakeFiles/gmx.dir/build'. make[3]: Leaving directory '/<>/build/basic-dp' make[3]: Entering directory '/<>/build/basic-dp' make[3]: Nothing to be done for 'share/template/CMakeFiles/template.dir/build'. make[3]: Leaving directory '/<>/build/basic-dp' [100%] Built target gmx [100%] Built target template make[2]: Leaving directory '/<>/build/basic-dp' /usr/bin/cmake -E cmake_progress_start /<>/build/basic-dp/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/build/basic-dp' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/build/basic-dp' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-nmtraj.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-insert-molecules.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-grompp.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-mdmat.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-dyecoupl.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-dos.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-spol.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-eneconv.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-do_dssp.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-helix.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-nmr.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-lie.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-rms.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-mk_angndx.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-trajectory.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-covar.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-h2order.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-convert-tpr.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-freevolume.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-nmeig.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-chi.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-order.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-nmens.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-bar.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-disre.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-xpm2ps.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-rmsdist.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-anadock.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-make_edi.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-wheel.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-tune_pme.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-dielectric.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-saltbr.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-rmsf.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-velacc.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-distance.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-dipoles.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-hydorder.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-awh.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-help.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-pme_error.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-angle.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-genrestr.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-solvate.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-bundle.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-dyndom.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-wham.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-rotacf.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-mindist.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-polystat.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-gyrate.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-view.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-rotmat.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-clustsize.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-hbond.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-confrms.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-morph.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-analyze.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-saxs.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-sham.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-check.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-x2top.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-editconf.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-trjconv.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-cluster.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-potential.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-current.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-rama.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-enemat.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-genion.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-helixorient.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-sans.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-filter.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-spatial.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-density.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-sasa.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-sigeps.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-densorder.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-densmap.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-anaeig.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-genconf.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-trjorder.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-msd.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-trjcat.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-dump.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-energy.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-traj.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-principal.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-pairdist.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-make_ndx.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-vanhove.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-sorient.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-pdb2gmx.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-mdrun.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-rdf.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-tcaf.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-select.1 -- Up-to-date: /<>/debian/gromacs/usr/share/man/man1/gmx-gangle.1 -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/README.tutor -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/README_FreeEnergyModifications.txt -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/table6-12.xvg -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ffG53a5.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/dgsolv.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/atom_nom.tbl -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/atomname2type.n2t -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/ff_dum.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a5.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/phbres.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ss.map -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/random.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/table6-11.xvg -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/edissoc.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/atommass.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/sw.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ffG45a3.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/bonds.dlg -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/nsfactor.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/elements.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ca-shift.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/dna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/dna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/tip4pew.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/dna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/tip5p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/gbsa.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/rna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/rna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/urea.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/rna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/rna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/dna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber96.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/tip4p.gro -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/lipids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/tips3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/tip5p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/cmap.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/gb.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/lipids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ffnanonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ffnabonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/rna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/dna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/charmm27.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/table6-9.xvg -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/specbond.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/residues.dtd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ffG53a6.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/dna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/dna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/tip4pew.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/dna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/tip5p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/gbsa.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/rna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/rna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/urea.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/rna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/rna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/dna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber03.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ffoplsaa.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/README -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/co-shift.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ha-shift.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/spc216.gro -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ps.m2p -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/residues.xml -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/flexwat-ferguson.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/dna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/dna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/tip4pew.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/dna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/tip5p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/gbsa.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/rna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/rna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/urea.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/rna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/rna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/dna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber94.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/flexspce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/ff_dum.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos53a6.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/surface.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/table6-8.xvg -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/vdw-msms.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/popc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/dppc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/ff_dum.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/tmcl.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos54a7.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/ethanol.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip4pew.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip5p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/gbsa.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/atomname2type.n2t -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/1propanol.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/methanol.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/tip5pe.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/oplsaa.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/vdwradii.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/defselection.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/dna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/dna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/tip4pew.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/dna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/tip5p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/gbsa.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/rna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/rna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/urea.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/rna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/rna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/dna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb-ildn.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/dna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/dna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/tip4pew.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/dna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/tip5p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/gbsa.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/rna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/rna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/urea.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/rna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/rna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/dna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/sfactor.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/export.dlg -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/dna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/dna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/tip4pew.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/dna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/tip5p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/gbsa.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/rna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/rna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/urea.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/rna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/rna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/dna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amber99sb.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/ff_dum.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a2.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ffG43a1.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ffoplsaa-n.tst -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/dna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/dna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/tip4pew.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/dna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/tip5p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/gbsa.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/rna.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/rna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/urea.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/rna.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/rna.arn -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/dna.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/amberGS.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/refi_aa.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/xlateat.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/electroneg.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/tip5p.gro -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/ff_dum.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/methanol.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/methanol216.gro -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos43a1.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/ffG43a2.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/flexspc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/cb-shift.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/residuetypes.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/forcefield.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/tip3p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/ffnonbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/tip4p.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.c.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.hdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/atomtypes.atp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/spce.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/ff_dum.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/watermodels.dat -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/ffbonded.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.r2b -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.vsd -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/ions.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.rtp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/spc.itp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/forcefield.doc -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/gromos45a3.ff/aminoacids.n.tdb -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/top/table6-10.xvg -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/template/CMakeLists.txt -- Installing: /<>/debian/gromacs/usr/share/gromacs/template/README -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/template/template.cpp -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/template/Makefile.pkg -- Up-to-date: /<>/debian/gromacs/usr/share/gromacs/template/cmake/FindGROMACS.cmake -- Installing: /<>/debian/gromacs/usr/bin/GMXRC -- Installing: /<>/debian/gromacs/usr/bin/GMXRC.bash -- Installing: /<>/debian/gromacs/usr/bin/GMXRC.zsh -- Installing: /<>/debian/gromacs/usr/bin/GMXRC.csh -- Up-to-date: /<>/debian/gromacs/usr/bin/demux.pl -- Up-to-date: /<>/debian/gromacs/usr/bin/xplor2gmx.pl -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/random.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/trajectoryanalysis.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility.h -- Installing: /<>/debian/gromacs/usr/include/gromacs/version.h -- Installing: /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/libgromacs_d.so.3.0.0 -- Installing: /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/libgromacs_d.so.3 -- Installing: /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/libgromacs_d.so -- Installing: /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/pkgconfig/libgromacs_d.pc -- Installing: /<>/debian/gromacs/usr/share/cmake/gromacs_d/libgromacs.cmake -- Installing: /<>/debian/gromacs/usr/share/cmake/gromacs_d/libgromacs-release.cmake -- Installing: /<>/debian/gromacs/usr/share/cmake/gromacs_d/gromacs_d-config.cmake -- Installing: /<>/debian/gromacs/usr/share/cmake/gromacs_d/gromacs_d-config-version.cmake -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/listed-forces/listed-forces.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlinehelpwriter.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlineinit.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlinemodule.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlineoptionsmodule.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlineparser.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline/cmdlineprogramcontext.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline/filenm.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline/pargs.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/commandline/viewit.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fft/fft.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/gpu_utils/hostallocator.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/linearalgebra/eigensolver.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/linearalgebra/matrix.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/linearalgebra/sparsematrix.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/math/3dtransforms.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/math/do_fit.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/math/functions.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/math/gmxcomplex.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/math/units.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/math/utilities.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/math/vec.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/math/vectypes.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/math/paddedvector.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/mdtypes/inputrec.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/mdtypes/mdatom.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/mdtypes/md_enums.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/mdtypes/state.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/abstractoption.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/abstractsection.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/basicoptions.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/filenameoption.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/filenameoptionmanager.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/ioptionsbehavior.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/ioptionscontainer.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/ioptionscontainerwithsections.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/isectionstorage.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/ivaluestore.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/optionfiletype.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/optionflags.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/options.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/optionsection.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/repeatingsection.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/timeunitmanager.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/options/valuestore.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/pbcutil/ishift.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/pbcutil/pbc.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/pbcutil/rmpbc.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/random/exponentialdistribution.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/random/gammadistribution.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/random/normaldistribution.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/random/seed.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/random/tabulatednormaldistribution.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/random/threefry.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/random/uniformintdistribution.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/random/uniformrealdistribution.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/timing/wallcycle.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/timing/walltime_accounting.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/topology/atomprop.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/topology/atoms.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/topology/block.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/topology/idef.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/topology/index.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/topology/mtop_util.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/topology/symtab.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/topology/topology.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/trajectory/energy.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/trajectory/trajectoryframe.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/alignedallocator.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/allocator.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/arrayref.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/arraysize.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/basedefinitions.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/baseversion.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/classhelpers.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/cstringutil.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/current_function.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/datafilefinder.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/errorcodes.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/exceptions.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/fatalerror.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/flags.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/futil.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/gmxassert.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/init.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/programcontext.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/real.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/smalloc.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/utility/stringutil.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/confio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/enxio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/filetypes.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/gmxfio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/matio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/mtxio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/oenv.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/pdbio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/rgb.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/tpxio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/trrio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/trxio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/xdr_datatype.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/xtcio.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/fileio/xvgr.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/gmxana/gstat.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/abstractdata.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/analysisdata.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/arraydata.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/dataframe.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/datamodule.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/average.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/displacement.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/histogram.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/lifetime.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/analysisdata/modules/plot.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection/nbsearch.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection/indexutil.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection/position.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection/selection.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection/selectioncollection.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection/selectionenums.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection/selectionoption.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection/selectionoptionbehavior.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/selection/selectionoptionmanager.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/trajectoryanalysis/analysismodule.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/trajectoryanalysis/analysissettings.h -- Up-to-date: /<>/debian/gromacs/usr/include/gromacs/trajectoryanalysis/cmdlinerunner.h -- Installing: /<>/debian/gromacs/usr/bin/gmx_d -- Up-to-date: /<>/debian/gromacs/usr/bin -- Up-to-date: /<>/debian/gromacs/usr/bin/gmx-completion.bash -- Installing: /<>/debian/gromacs/usr/bin/gmx-completion-gmx_d.bash make[1]: Leaving directory '/<>/build/basic-dp' dh_installman -pgromacs debian/man/demux.1 debian/man/xplor2gmx.1 # gmx(1) -> gmx_d(1) dh_link -pgromacs dh_lintian -pgromacs dh_testdir dh_testroot dh_prep -pgromacs-mpich dh_installdirs -pgromacs-mpich /usr/bin/make -j4 -C build/mpich install DESTDIR=/<>/debian/gromacs-mpich make[1]: Entering directory '/<>/build/mpich' /usr/bin/cmake -H/<> -B/<>/build/mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/mpich/CMakeFiles /<>/build/mpich/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich /<>/build/mpich/src/gromacs /<>/build/mpich/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/mpich /<>/build/mpich/src/programs /<>/build/mpich/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[3]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/mpich' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[3]: Leaving directory '/<>/build/mpich' make[3]: Entering directory '/<>/build/mpich' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. make[3]: Leaving directory '/<>/build/mpich' [ 3%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend [ 5%] Built target mdrun_objlib make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich /<>/build/mpich/src/gromacs /<>/build/mpich/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/mpich' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[3]: Leaving directory '/<>/build/mpich' [100%] Built target libgromacs /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/depend make[3]: Entering directory '/<>/build/mpich' cd /<>/build/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/mpich /<>/build/mpich/src/programs /<>/build/mpich/src/programs/CMakeFiles/mdrun.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/mpich' /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/build make[3]: Entering directory '/<>/build/mpich' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun.dir/build'. make[3]: Leaving directory '/<>/build/mpich' [100%] Built target mdrun make[2]: Leaving directory '/<>/build/mpich' /usr/bin/cmake -E cmake_progress_start /<>/build/mpich/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/build/mpich' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/build/mpich' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /<>/debian/gromacs-mpich/usr/bin/mdrun_mpi.mpich -- Installing: /<>/debian/gromacs-mpich/usr/bin/gmx-completion-mdrun_mpi.mpich.bash make[1]: Leaving directory '/<>/build/mpich' /usr/bin/make -j4 -C build/mpich-dp install DESTDIR=/<>/debian/gromacs-mpich make[1]: Entering directory '/<>/build/mpich-dp' /usr/bin/cmake -H/<> -B/<>/build/mpich-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/mpich-dp/CMakeFiles /<>/build/mpich-dp/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs /<>/build/mpich-dp/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/mpich-dp /<>/build/mpich-dp/src/programs /<>/build/mpich-dp/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[3]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/mpich-dp' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[3]: Leaving directory '/<>/build/mpich-dp' make[3]: Entering directory '/<>/build/mpich-dp' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. make[3]: Leaving directory '/<>/build/mpich-dp' [ 3%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend [ 5%] Built target mdrun_objlib make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/mpich-dp /<>/build/mpich-dp/src/gromacs /<>/build/mpich-dp/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/mpich-dp' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[3]: Leaving directory '/<>/build/mpich-dp' [100%] Built target libgromacs /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/depend make[3]: Entering directory '/<>/build/mpich-dp' cd /<>/build/mpich-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/mpich-dp /<>/build/mpich-dp/src/programs /<>/build/mpich-dp/src/programs/CMakeFiles/mdrun.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/mpich-dp' /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/build make[3]: Entering directory '/<>/build/mpich-dp' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun.dir/build'. make[3]: Leaving directory '/<>/build/mpich-dp' [100%] Built target mdrun make[2]: Leaving directory '/<>/build/mpich-dp' /usr/bin/cmake -E cmake_progress_start /<>/build/mpich-dp/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/build/mpich-dp' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/build/mpich-dp' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /<>/debian/gromacs-mpich/usr/bin/mdrun_mpi_d.mpich -- Installing: /<>/debian/gromacs-mpich/usr/bin/gmx-completion-mdrun_mpi_d.mpich.bash make[1]: Leaving directory '/<>/build/mpich-dp' chmod 644 /<>/debian/gromacs-mpich/usr/bin/gmx-completion* mv /<>/debian/gromacs-mpich/usr/bin/gmx-completion* /<>/debian/gromacs-mpich/usr/share/gromacs/shell-specific/ dh_installman -pgromacs-mpich debian/man/mdrun_mpi.mpich.1 dh_link -pgromacs-mpich usr/share/man/man1/mdrun_mpi.mpich.1.gz usr/share/man/man1/mdrun_mpi_d.mpich.1.gz dh_lintian -pgromacs-mpich dh_testdir dh_testroot dh_prep -pgromacs-openmpi dh_installdirs -pgromacs-openmpi /usr/bin/make -j4 -C build/openmpi install DESTDIR=/<>/debian/gromacs-openmpi make[1]: Entering directory '/<>/build/openmpi' /usr/bin/cmake -H/<> -B/<>/build/openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi/CMakeFiles /<>/build/openmpi/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi /<>/build/openmpi/src/gromacs /<>/build/openmpi/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/openmpi /<>/build/openmpi/src/programs /<>/build/openmpi/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[3]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/openmpi' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[3]: Leaving directory '/<>/build/openmpi' make[3]: Entering directory '/<>/build/openmpi' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. make[3]: Leaving directory '/<>/build/openmpi' [ 3%] Built target tng_io_obj /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend [ 5%] Built target mdrun_objlib make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi /<>/build/openmpi/src/gromacs /<>/build/openmpi/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/openmpi' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[3]: Leaving directory '/<>/build/openmpi' [100%] Built target libgromacs /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/depend make[3]: Entering directory '/<>/build/openmpi' cd /<>/build/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/openmpi /<>/build/openmpi/src/programs /<>/build/openmpi/src/programs/CMakeFiles/mdrun.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/openmpi' /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/build make[3]: Entering directory '/<>/build/openmpi' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun.dir/build'. make[3]: Leaving directory '/<>/build/openmpi' [100%] Built target mdrun make[2]: Leaving directory '/<>/build/openmpi' /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/build/openmpi' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/build/openmpi' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /<>/debian/gromacs-openmpi/usr/bin/mdrun_mpi.openmpi -- Installing: /<>/debian/gromacs-openmpi/usr/bin/gmx-completion-mdrun_mpi.openmpi.bash make[1]: Leaving directory '/<>/build/openmpi' /usr/bin/make -j4 -C build/openmpi-dp install DESTDIR=/<>/debian/gromacs-openmpi make[1]: Entering directory '/<>/build/openmpi-dp' /usr/bin/cmake -H/<> -B/<>/build/openmpi-dp --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi-dp/CMakeFiles /<>/build/openmpi-dp/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/depend /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs /<>/build/openmpi-dp/src/gromacs/CMakeFiles/tng_io_obj.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/programs /<>/build/openmpi-dp/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/tng_io_obj.dir/build.make src/gromacs/CMakeFiles/tng_io_obj.dir/build make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build make[3]: Entering directory '/<>/build/openmpi-dp' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/tng_io_obj.dir/build'. make[3]: Leaving directory '/<>/build/openmpi-dp' [ 3%] Built target tng_io_obj make[3]: Entering directory '/<>/build/openmpi-dp' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend [ 5%] Built target mdrun_objlib make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/gromacs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/gromacs /<>/build/openmpi-dp/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build make[3]: Entering directory '/<>/build/openmpi-dp' make[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. make[3]: Leaving directory '/<>/build/openmpi-dp' [100%] Built target libgromacs /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/depend make[3]: Entering directory '/<>/build/openmpi-dp' cd /<>/build/openmpi-dp && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src/programs /<>/build/openmpi-dp /<>/build/openmpi-dp/src/programs /<>/build/openmpi-dp/src/programs/CMakeFiles/mdrun.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/make -f src/programs/CMakeFiles/mdrun.dir/build.make src/programs/CMakeFiles/mdrun.dir/build make[3]: Entering directory '/<>/build/openmpi-dp' make[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun.dir/build'. make[3]: Leaving directory '/<>/build/openmpi-dp' [100%] Built target mdrun make[2]: Leaving directory '/<>/build/openmpi-dp' /usr/bin/cmake -E cmake_progress_start /<>/build/openmpi-dp/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/build/openmpi-dp' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/build/openmpi-dp' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /<>/debian/gromacs-openmpi/usr/bin/mdrun_mpi_d.openmpi -- Installing: /<>/debian/gromacs-openmpi/usr/bin/gmx-completion-mdrun_mpi_d.openmpi.bash make[1]: Leaving directory '/<>/build/openmpi-dp' chmod 644 /<>/debian/gromacs-openmpi/usr/bin/gmx-completion* mv /<>/debian/gromacs-openmpi/usr/bin/gmx-completion* /<>/debian/gromacs-openmpi/usr/share/gromacs/shell-specific/ # Force-disable RUNPATH - see # and lintian tag binary-or-shlib-defines-rpath in versions >= 2.5.50 chrpath -d /<>/debian/gromacs-openmpi/usr/bin/mdrun_mpi* dh_installman -pgromacs-openmpi debian/man/mdrun_mpi.openmpi.1 dh_link -pgromacs-openmpi usr/share/man/man1/mdrun_mpi.openmpi.1.gz usr/share/man/man1/mdrun_mpi_d.openmpi.1.gz dh_lintian -pgromacs-openmpi dh_testdir dh_testroot dh_prep -pgromacs-data -plibgromacs-dev dh_installdirs -pgromacs-data mv /<>/debian/gromacs/usr/share/gromacs/top \ /<>/debian/gromacs-data/usr/share/gromacs mv /<>/debian/gromacs/usr/share/man \ /<>/debian/gromacs-data/usr/share/man # some of the default installation directories for documentation and # example shell scripts are not FHS-friendly; move them appropriately mv /<>/debian/gromacs/usr/bin/GMXRC* \ /<>/debian/gromacs/usr/bin/gmx-completion* \ /<>/debian/gromacs-data/usr/share/gromacs/shell-specific chmod 644 /<>/debian/gromacs-data/usr/share/gromacs/shell-specific/* dh_link -pgromacs-data usr/share/doc/gromacs/html usr/share/doc/gromacs-data/html dh_link -pgromacs-data usr/share/doc/gromacs/html usr/share/doc/libgromacs-dev/html dh_link -pgromacs-data usr/share/doc/gromacs/html usr/share/doc/libgromacs3/html # this name is also given in documentation dh_link -pgromacs-data usr/share/doc/gromacs-data/copyright usr/share/doc/gromacs-data/COPYING # rename a pair of Perl scripts to drop the .pl extension (Policy 10.4) mv /<>/debian/gromacs/usr/bin/demux.pl /<>/debian/gromacs/usr/bin/demux mv /<>/debian/gromacs/usr/bin/xplor2gmx.pl /<>/debian/gromacs/usr/bin/xplor2gmx mkdir -p /<>/debian/libgromacs3/usr/lib/aarch64-linux-gnu mv /<>/debian/gromacs/usr/lib/*/*.so.* /<>/debian/libgromacs3/usr/lib/aarch64-linux-gnu/ dh_installdirs -plibgromacs-dev mv /<>/debian/gromacs/usr/include /<>/debian/libgromacs-dev/usr/include # catch normal libraries plus all applicable MPI variants mkdir -p /<>/debian/libgromacs-dev/usr/lib/aarch64-linux-gnu mv /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/*.so \ /<>/debian/gromacs/usr/lib/aarch64-linux-gnu/pkgconfig \ /<>/debian/libgromacs-dev/usr/lib/aarch64-linux-gnu/ rmdir /<>/debian/gromacs/usr/lib/aarch64-linux-gnu /<>/debian/gromacs/usr/lib mv /<>/debian/gromacs/usr/share/gromacs/template /<>/debian/libgromacs-dev/usr/share/gromacs/template # remaining documentation catch-all mv /<>/debian/gromacs/usr/share/gromacs/* /<>/debian/gromacs-data/usr/share/doc/gromacs rmdir /<>/debian/gromacs/usr/share/gromacs # what are you doing here? mv /<>/debian/gromacs/usr/share/cmake /<>/debian/libgromacs-dev/usr/share/gromacs/ dh_lintian -pgromacs -pgromacs-data -plibgromacs3 dh_testdir -a dh_testroot -a dh_installchangelogs -a dh_installdocs -a dh_strip -A dh_compress -a dh_fixperms -a dh_makeshlibs -a dh_shlibdeps -plibgromacs3 -L libgromacs3 -l debian/libgromacs3/usr/lib dh_shlibdeps -pgromacs -L libgromacs3 -l debian/libgromacs3/usr/lib:debian/gromacs/usr/lib dh_shlibdeps -pgromacs-mpich -L gromacs-mpich -l debian/gromacs-mpich/usr/lib dh_shlibdeps -pgromacs-openmpi -L gromacs-openmpi -l debian/gromacs-openmpi/usr/lib dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package libgromacs-dev: unknown substitution variable ${shlibs:Depends} dh_installdeb -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 131 INFO: pkgstriptranslations version 131 INFO: pkgstriptranslations version 131 pkgstriptranslations: processing gromacs (in debian/gromacs); do_strip: , oemstrip: pkgstriptranslations: processing gromacs-mpich-dbgsym (in debian/.debhelper/gromacs-mpich/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing libgromacs3-dbgsym (in debian/.debhelper/libgromacs3/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/gromacs-mpich/dbgsym-root/DEBIAN/control, package gromacs-mpich-dbgsym, directory debian/.debhelper/gromacs-mpich/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package gromacs-mpich-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'gromacs-mpich-dbgsym' in 'debian/.debhelper/scratch-space/build-gromacs-mpich/gromacs-mpich-dbgsym_2018-1_arm64.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/libgromacs3/dbgsym-root/DEBIAN/control, package libgromacs3-dbgsym, directory debian/.debhelper/libgromacs3/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgromacs3-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgromacs3-dbgsym' in 'debian/.debhelper/scratch-space/build-libgromacs3/libgromacs3-dbgsym_2018-1_arm64.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/gromacs/DEBIAN/control, package gromacs, directory debian/gromacs grep: ../gromacs-data/DEBIAN/control: No such file or directory Searching for duplicated docs in dependency gromacs-data... Searching for duplicated docs in dependency libgromacs3... symlinking changelog.Debian.gz in gromacs to file in libgromacs3 pkgstripfiles: Running PNG optimization (using 4 cpus) for package gromacs ... pkgstripfiles: No PNG files. dpkg-deb: building package 'gromacs' in '../gromacs_2018-1_arm64.deb'. INFO: pkgstriptranslations version 131 pkgstriptranslations: processing gromacs-dbgsym (in debian/.debhelper/gromacs/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/gromacs/dbgsym-root/DEBIAN/control, package gromacs-dbgsym, directory debian/.debhelper/gromacs/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package gromacs-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'gromacs-dbgsym' in 'debian/.debhelper/scratch-space/build-gromacs/gromacs-dbgsym_2018-1_arm64.deb'. Renaming gromacs-dbgsym_2018-1_arm64.deb to gromacs-dbgsym_2018-1_arm64.ddeb INFO: pkgstriptranslations version 131 pkgstriptranslations: processing libgromacs3 (in debian/libgromacs3); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libgromacs3/DEBIAN/control, package libgromacs3, directory debian/libgromacs3 pkgstripfiles: Truncating usr/share/doc/libgromacs3/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgromacs3 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgromacs3' in '../libgromacs3_2018-1_arm64.deb'. Renaming gromacs-mpich-dbgsym_2018-1_arm64.deb to gromacs-mpich-dbgsym_2018-1_arm64.ddeb INFO: pkgstriptranslations version 131 pkgstriptranslations: processing gromacs-openmpi (in debian/gromacs-openmpi); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/gromacs-openmpi/DEBIAN/control, package gromacs-openmpi, directory debian/gromacs-openmpi INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... Renaming libgromacs3-dbgsym_2018-1_arm64.deb to libgromacs3-dbgsym_2018-1_arm64.ddeb INFO: pkgstriptranslations version 131 INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... pkgstriptranslations: processing libgromacs-dev (in debian/libgromacs-dev); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... pkgstripfiles: processing control file: debian/libgromacs-dev/DEBIAN/control, package libgromacs-dev, directory debian/libgromacs-dev Searching for duplicated docs in dependency libgromacs3... symlinking changelog.Debian.gz in libgromacs-dev to file in libgromacs3 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libgromacs-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libgromacs-dev' in '../libgromacs-dev_2018-1_arm64.deb'. INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... INFO: pkgstriptranslations version 131 pkgstriptranslations: processing gromacs-mpich (in debian/gromacs-mpich); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (gromacs-openmpi) ... pkgstripfiles: processing control file: debian/gromacs-mpich/DEBIAN/control, package gromacs-mpich, directory debian/gromacs-mpich pkgstripfiles: Truncating usr/share/doc/gromacs-mpich/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package gromacs-mpich ... pkgstripfiles: No PNG files. dpkg-deb: building package 'gromacs-mpich' in '../gromacs-mpich_2018-1_arm64.deb'. pkgstripfiles: Truncating usr/share/doc/gromacs-openmpi/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package gromacs-openmpi ... pkgstripfiles: No PNG files. dpkg-deb: building package 'gromacs-openmpi' in '../gromacs-openmpi_2018-1_arm64.deb'. INFO: pkgstriptranslations version 131 pkgstriptranslations: processing gromacs-openmpi-dbgsym (in debian/.debhelper/gromacs-openmpi/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/gromacs-openmpi/dbgsym-root/DEBIAN/control, package gromacs-openmpi-dbgsym, directory debian/.debhelper/gromacs-openmpi/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package gromacs-openmpi-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'gromacs-openmpi-dbgsym' in 'debian/.debhelper/scratch-space/build-gromacs-openmpi/gromacs-openmpi-dbgsym_2018-1_arm64.deb'. Renaming gromacs-openmpi-dbgsym_2018-1_arm64.deb to gromacs-openmpi-dbgsym_2018-1_arm64.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../gromacs_2018-1_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build gromacs-2018 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20180121-0240 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ gromacs_2018-1_arm64.changes: ----------------------------- Format: 1.8 Date: Wed, 10 Jan 2018 22:23:18 -0800 Source: gromacs Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich gromacs-openmpi Architecture: arm64 Version: 2018-1 Distribution: bionic-proposed Urgency: low Maintainer: Launchpad Build Daemon Changed-By: Nicholas Breen Description: gromacs - Molecular dynamics simulator, with building and analysis tools gromacs-data - GROMACS molecular dynamics sim, data and documentation gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization libgromacs-dev - GROMACS molecular dynamics sim, development kit libgromacs3 - GROMACS molecular dynamics sim, shared libraries Changes: gromacs (2018-1) unstable; urgency=low . * New upstream release. - Remove test_GMX_ALIGNED.patch, incorporated. - Update debian/man/*mdrun* man pages. * Bump Standards-Version to 4.1.3. 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It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions, but since GROMACS is extremely fast at calculating the nonbonded interactions (that usually dominate simulations) many groups are also using it for research on non- biological systems, e.g. polymers. . This package contains only the core simulation engine with parallel support using the MPICH (v3) interface. It is suitable for nodes of a processing cluster, or for multiprocessor machines. drwxr-xr-x root/root 0 2018-01-11 06:23 ./ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/bin/ -rwxr-xr-x root/root 7471432 2018-01-11 06:23 ./usr/bin/mdrun_mpi.mpich -rwxr-xr-x root/root 7381320 2018-01-11 06:23 ./usr/bin/mdrun_mpi_d.mpich drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/doc/gromacs-mpich/ -rw-r--r-- root/root 794 2018-01-11 06:23 ./usr/share/doc/gromacs-mpich/README.Debian -rw-r--r-- root/root 1670 2018-01-11 06:23 ./usr/share/doc/gromacs-mpich/changelog.Debian.gz -rw-r--r-- root/root 21613 2018-01-11 06:10 ./usr/share/doc/gromacs-mpich/copyright drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/gromacs/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/gromacs/shell-specific/ -rw-r--r-- root/root 55 2018-01-11 06:23 ./usr/share/gromacs/shell-specific/gmx-completion-mdrun_mpi.mpich.bash -rw-r--r-- root/root 57 2018-01-11 06:23 ./usr/share/gromacs/shell-specific/gmx-completion-mdrun_mpi_d.mpich.bash drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/lintian/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 212 2017-12-23 18:11 ./usr/share/lintian/overrides/gromacs-mpich drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/man/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/man/man1/ -rw-r--r-- root/root 6083 2018-01-11 06:23 ./usr/share/man/man1/mdrun_mpi.mpich.1.gz lrwxrwxrwx root/root 0 2018-01-11 06:23 ./usr/share/man/man1/mdrun_mpi_d.mpich.1.gz -> mdrun_mpi.mpich.1.gz gromacs-openmpi_2018-1_arm64.deb -------------------------------- new debian package, version 2.0. size 5714540 bytes: control archive=2084 bytes. 1371 bytes, 28 lines control 724 bytes, 9 lines md5sums 1702 bytes, 53 lines * postinst #!/bin/sh 322 bytes, 22 lines * prerm #!/bin/sh Package: gromacs-openmpi Source: gromacs Version: 2018-1 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debichem Team Installed-Size: 14574 Depends: openmpi-bin (>= 1.2.3), libc6 (>= 2.17), libfftw3-double3 (>= 3.3.5), libfftw3-single3 (>= 3.3.5), libgcc1 (>= 1:3.0), libgomp1 (>= 4.9), libhwloc5 (>= 1.11.9), libopenmpi2, libstdc++6 (>= 6), zlib1g (>= 1:1.2.0) Recommends: gromacs Suggests: gromacs-data Replaces: gromacs-lam Section: science Priority: optional Homepage: http://www.gromacs.org/ Description: Molecular dynamics sim, binaries for OpenMPI parallelization GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. . It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions, but since GROMACS is extremely fast at calculating the nonbonded interactions (that usually dominate simulations) many groups are also using it for research on non- biological systems, e.g. polymers. . This package contains only the core simulation engine with parallel support using the OpenMPI interface. 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It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions, but since GROMACS is extremely fast at calculating the nonbonded interactions (that usually dominate simulations) many groups are also using it for research on non- biological systems, e.g. polymers. drwxr-xr-x root/root 0 2018-01-11 06:23 ./ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/bin/ -rwxr-xr-x root/root 3378 2016-07-09 00:55 ./usr/bin/demux -rwxr-xr-x root/root 367512 2018-01-11 06:23 ./usr/bin/gmx -rwxr-xr-x root/root 367512 2018-01-11 06:23 ./usr/bin/gmx_d -rwxr-xr-x root/root 8209 2016-10-25 09:41 ./usr/bin/xplor2gmx drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/doc/gromacs/ -rw-r--r-- root/root 267 2016-07-09 00:55 ./usr/share/doc/gromacs/AUTHORS -rw-r--r-- root/root 3655 2017-12-23 18:11 ./usr/share/doc/gromacs/README.Debian -rw-r--r-- root/root 2189 2018-01-11 06:23 ./usr/share/doc/gromacs/README.gz lrwxrwxrwx root/root 0 2018-01-11 06:23 ./usr/share/doc/gromacs/changelog.Debian.gz -> ../libgromacs3/changelog.Debian.gz -rw-r--r-- root/root 21613 2018-01-11 06:10 ./usr/share/doc/gromacs/copyright libgromacs-dev_2018-1_arm64.deb ------------------------------- new debian package, version 2.0. size 200412 bytes: control archive=4992 bytes. 1318 bytes, 29 lines control 11628 bytes, 151 lines md5sums Package: libgromacs-dev Source: gromacs Version: 2018-1 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debichem Team Installed-Size: 1357 Depends: fftw3-dev, libgromacs3 (= 2018-1) Recommends: gromacs-data Suggests: gromacs-mpich (= 2018-1) | gromacs-openmpi (= 2018-1), libmpich-dev, libx11-dev, zlib1g-dev Breaks: gromacs-dev (<< 5.1-1~) Replaces: gromacs-dev (<< 5.1-1~) Section: libdevel Priority: optional Homepage: http://www.gromacs.org/ Description: GROMACS molecular dynamics sim, development kit GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. . It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions, but since GROMACS is extremely fast at calculating the nonbonded interactions (that usually dominate simulations) many groups are also using it for research on non- biological systems, e.g. polymers. . This package contains header files and static libraries for development purposes, plus sample Makefiles. 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1:3.0), libgomp1 (>= 4.9), libhwloc5 (>= 1.11.9), liblapack3 | liblapack.so.3, libstdc++6 (>= 7), zlib1g (>= 1:1.2.0) Breaks: gromacs (<< 5.1-1~) Section: libs Priority: optional Multi-Arch: same Homepage: http://www.gromacs.org/ Description: GROMACS molecular dynamics sim, shared libraries GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. . It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions, but since GROMACS is extremely fast at calculating the nonbonded interactions (that usually dominate simulations) many groups are also using it for research on non- biological systems, e.g. polymers. . This package contains the shared library, libgromacs. drwxr-xr-x root/root 0 2018-01-11 06:23 ./ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/lib/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/lib/aarch64-linux-gnu/ lrwxrwxrwx root/root 0 2018-01-11 06:23 ./usr/lib/aarch64-linux-gnu/libgromacs.so.3 -> libgromacs.so.3.0.0 -rw-r--r-- root/root 12081816 2018-01-11 06:23 ./usr/lib/aarch64-linux-gnu/libgromacs.so.3.0.0 lrwxrwxrwx root/root 0 2018-01-11 06:23 ./usr/lib/aarch64-linux-gnu/libgromacs_d.so.3 -> libgromacs_d.so.3.0.0 -rw-r--r-- root/root 11940152 2018-01-11 06:23 ./usr/lib/aarch64-linux-gnu/libgromacs_d.so.3.0.0 drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/doc/libgromacs3/ -rw-r--r-- root/root 1670 2018-01-11 06:23 ./usr/share/doc/libgromacs3/changelog.Debian.gz -rw-r--r-- root/root 21613 2018-01-11 06:10 ./usr/share/doc/libgromacs3/copyright drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/lintian/ drwxr-xr-x root/root 0 2018-01-11 06:23 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 24 2017-12-23 18:11 ./usr/share/lintian/overrides/libgromacs3 +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build-Space: 7043140 Build-Time: 14940 Distribution: bionic-proposed Host Architecture: arm64 Install-Time: 98 Job: gromacs_2018-1.dsc Machine Architecture: arm64 Package: gromacs Package-Time: 15049 Source-Version: 2018-1 Space: 7043140 Status: successful Version: 2018-1 -------------------------------------------------------------------------------- Finished at 20180121-0240 Build needed 04:10:49, 7043140k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=bionic --arch=arm64 PACKAGEBUILD-14229464 Scanning for processes to kill in build PACKAGEBUILD-14229464 RUN: /usr/share/launchpad-buildd/slavebin/in-target umount-chroot --backend=chroot --series=bionic --arch=arm64 PACKAGEBUILD-14229464 Stopping target for build PACKAGEBUILD-14229464 RUN: /usr/share/launchpad-buildd/slavebin/in-target remove-build --backend=chroot --series=bionic --arch=arm64 PACKAGEBUILD-14229464 Removing build PACKAGEBUILD-14229464