gmap 2024-02-22+ds-1 source package in Ubuntu
Changelog
gmap (2024-02-22+ds-1) unstable; urgency=medium * New upstream version 2024-02-22+ds * remove_getopt_code_copy.patch: refresh. * patch simd_fixes: refresh. * missing-include.patch: delete: file removed upstream. -- Étienne Mollier <email address hidden> Mon, 26 Feb 2024 21:01:08 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- amd64 arm64 armel armhf i386 loong64 mips64el mipsel ppc64el riscv64
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section |
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Downloads
File | Size | SHA-256 Checksum |
---|---|---|
gmap_2024-02-22+ds-1.dsc | 2.2 KiB | 5e356cd7fc314d486ee1b68cf32008dfcdd55c50835f7267adbf7ab1ccdfd63f |
gmap_2024-02-22+ds.orig.tar.xz | 2.3 MiB | 5e700517f07b3447a0c38c60417fe8abbc8e2797da478db7d1e20cbd793858a8 |
gmap_2024-02-22+ds-1.debian.tar.xz | 12.9 KiB | dbb31386294d63152db9204090cdf64343b6472effceda7f16b00a71e2500e8a |
Available diffs
- diff from 2023-12-01+ds-2 to 2024-02-22+ds-1 (364.9 KiB)
No changes file available.
Binary packages built by this source
- gmap: spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
- gmap-dbgsym: debug symbols for gmap