FTBFS: /usr/lib/gcc/i686-linux-gnu/4.8/../../../../lib/libSCbasis.so: undefined reference to `dgesvd_'

[Andreas Moog]

/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -o ghemical fileio.o filetrans.o custom_app.o custom_camera.o custom_lights.o project.o spline.o pangofont_wcl.o oglview_wcl.o ac_stor_wcl.o p1dview_wcl.o p2dview_wcl.o eldview_wcl.o rcpview_wcl.o gpcview_wcl.o ogl_plane.o ogl_surface.o ogl_ribbon.o gtk_simple_dialogs.o gtk_glade_dialog.o gtk_file_export_dialog.o gtk_file_import_dialog.o gtk_geomopt_dialog.o gtk_moldyn_dialog.o gtk_progress_dialog.o gtk_setup_dialog.o gtk_stereo_dialog.o gtk_trajview_dialog.o gtk_wnd.o gtk_oglview_wnd.o gtk_p1dview_wnd.o gtk_p2dview_wnd.o gtk_eldview_wnd.o gtk_rcpview_wnd.o gtk_gpcview_wnd.o gtk_app.o gtk_project.o gtk_main.o -lm -L/usr/X11R6/lib -pthread -lgthread-2.0 -lglib-2.0 -Wl,--export-dynamic -pthread -lgtkglext-x11-1.0 -lgdkglext-x11-1.0 -lGLU -lGL -lXmu -lXt -lSM -lICE -lpangox-1.0 -lX11 -lgmodule-2.0 -lglade-2.0 -lgtk-x11-2.0 -lxml2 -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0 -lgdk_pixbuf-2.0 -lcairo -lpango-1.0 -lfontconfig -lgobject-2.0 -lglib-2.0 -lfreetype -lopenbabel -lghemical -lSCmbptr12 -lSCmbpt -lSCcints -lSCpsi -lSCdft -lSCscf -lSCwfn -lSCsolvent -lSCintv3 -lSCbasis -lSCoint3 -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCoptions -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lmopac7 -lGL -lGLU -loglappth
libtool: link: g++ -g -O2 -o ghemical fileio.o filetrans.o custom_app.o custom_camera.o custom_lights.o project.o spline.o pangofont_wcl.o oglview_wcl.o ac_stor_wcl.o p1dview_wcl.o p2dview_wcl.o eldview_wcl.o rcpview_wcl.o gpcview_wcl.o ogl_plane.o ogl_surface.o ogl_ribbon.o gtk_simple_dialogs.o gtk_glade_dialog.o gtk_file_export_dialog.o gtk_file_import_dialog.o gtk_geomopt_dialog.o gtk_moldyn_dialog.o gtk_progress_dialog.o gtk_setup_dialog.o gtk_stereo_dialog.o gtk_trajview_dialog.o gtk_wnd.o gtk_oglview_wnd.o gtk_p1dview_wnd.o gtk_p2dview_wnd.o gtk_eldview_wnd.o gtk_rcpview_wnd.o gtk_gpcview_wnd.o gtk_app.o gtk_project.o gtk_main.o -pthread -Wl,--export-dynamic -pthread -lm -L/usr/X11R6/lib -lgthread-2.0 /usr/lib/libgtkglext-x11-1.0.so /usr/lib/libgdkglext-x11-1.0.so -lXmu -lXt -lSM -lICE -lpangox-1.0 -lX11 -lgmodule-2.0 /usr/lib/i386-linux-gnu/libglade-2.0.so -lgtk-x11-2.0 -lxml2 -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0 -lgdk_pixbuf-2.0 /usr/lib/i386-linux-gnu/libcairo.so -lpango-1.0 -lfontconfig -lgobject-2.0 -lglib-2.0 /usr/lib/i386-linux-gnu/libfreetype.so -lopenbabel -lghemical -lSCmbptr12 -lSCmbpt -lSCcints -lSCpsi -lSCdft -lSCscf -lSCwfn -lSCsolvent -lSCintv3 -lSCbasis -lSCoint3 -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCoptions -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lmopac7 -lGL -lGLU -loglappth -pthread
/usr/lib/gcc/i686-linux-gnu/4.8/../../../../lib/libSCbasis.so: undefined reference to `dgesvd_'
collect2: error: ld returned 1 exit status
make[4]: *** [ghemical] Error 1
make[4]: Leaving directory `/build/buildd/ghemical-3.0.0/src'
make[3]: *** [all-recursive] Error 1
make[3]: Leaving directory `/build/buildd/ghemical-3.0.0/src'
make[2]: *** [all] Error 2
make[2]: Leaving directory `/build/buildd/ghemical-3.0.0/src'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/build/buildd/ghemical-3.0.0'
dh_auto_build: make -j8 returned exit code 2
make: *** [build] Error 2
dpkg-buildpackage: error: debian/rules build gave error exit status 2
******************************************************************************
Build finished at 20140201-0405
FAILED [dpkg-buildpackage died]

Full log: https://launchpadlibrarian.net/164509843/buildlog_ubuntu-trusty-i386.ghemical_3.0.0-1_FAILEDTOBUILD.txt.gz

[Graham Inggs (ginggs)]

The attached updated 11_ld_as_needed.patch for * mpqc * fixes this FTBFS by linking libSCbasis to liblapack to resolve dgesvd_.

[Launchpad Janitor (janitor)]

This bug was fixed in the package mpqc - 2.3.1-16ubuntu2

---------------
mpqc (2.3.1-16ubuntu2) vivid; urgency=medium

  * debian/patches/11_ld_as_needed.patch: Updated to fix
    FTBFS in ghemical with ld --as-needed. (LP: #1277718)
 -- Graham Inggs <email address hidden> Sun, 02 Nov 2014 08:55:42 +0200