Ubuntu
gbrowse package

gbrowse 2.56+dfsg-6 source package in Ubuntu

Changelog

gbrowse (2.56+dfsg-6) unstable; urgency=medium

  * Drop unused debian/get-orig-source
  * Add debian/tests/pkg-perl/smoke-files (thanks for the hint to
    gregor herrmann <email address hidden>)
    Closes: #946718

 -- Andreas Tille <email address hidden>  Tue, 17 Dec 2019 10:03:23 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
gbrowse_2.56+dfsg-6.dsc 2.6 KiB 4cdee44aae847a49bfcaee9937b52c741bce997d2691515fcfb89e0a7d18b24c
gbrowse_2.56+dfsg.orig.tar.gz 4.2 MiB f6da1ff315b17ec260810cf439a54ae7ddd66728015be03f7fbb6ba795676f81
gbrowse_2.56+dfsg-6.debian.tar.xz 22.8 KiB 3e4522b788ccc9e2d02b58a8f7c6d941c27d6c82c99a68b722e04c5a64e6d0c5

Available diffs

No changes file available.

Binary packages built by this source

gbrowse: GMOD Generic Genome Browser

 Generic Genome Browser is a simple but highly
 configurable web-based genome browser. It is a component of the
 Generic Model Organism Systems Database project (GMOD).
 Some of its features:
  * Simultaneous bird's eye and detailed views of the genome;
  * Scroll, zoom, center;
  * Attach arbitrary URLs to any annotation;
  * Order and appearance of tracks are customizable by administrator and
    end-user;
  * Search by annotation ID, name, or comment;
  * Supports third party annotation using GFF formats;
  * Settings persist across sessions;
  * DNA and GFF dumps;
  * Connectivity to different databases, including BioSQL and Chado;
  * Multi-language support;
  * Third-party feature loading;
  * Customizable plug-in architecture (e.g. run BLAST, dump & import many
    formats, find oligonucleotides, design primers, create restriction maps,
    edit features).

gbrowse-calign: CAlign helper

 Generic Genome Browser is a simple but highly
 configurable web-based genome browser. It is a component of the
 Generic Model Organism Systems Database project (GMOD).
 .
 This package provides the CAlign helper
 for use with Realign. It speeds up Smith-Waterman alignment.

gbrowse-calign-dbgsym: debug symbols for gbrowse-calign
gbrowse-data: Sample data to use GBrowse

 Generic Genome Browser is a simple but highly
 configurable web-based genome browser. It is a component of the
 Generic Model Organism Systems Database project (GMOD).
 .
 This package contains sample data to test the gbrowse tool
 with the Yeast genome.