Ubuntu
gatk-bwamem package

gatk-bwamem 1.0.4+dfsg2-3 source package in Ubuntu

Changelog

gatk-bwamem (1.0.4+dfsg2-3) unstable; urgency=medium

  * Team upload.
  * d/rules: make sure the openmp-simd compiler flag is used.
  * d/patches/hardening: improve with the help of blhc.
  * Standards-Version: 4.6.2 (routine-update)

 -- Michael R. Crusoe <email address hidden>  Sun, 24 Mar 2024 17:03:31 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc

Downloads

File Size SHA-256 Checksum
gatk-bwamem_1.0.4+dfsg2-3.dsc 2.4 KiB 535c7ae59c0960befe115f27e83a493e3925c2548a5a2a8479e9af15dbbdcc6e
gatk-bwamem_1.0.4+dfsg2.orig-bwa-apache2.tar.xz 141.0 KiB 954d5d5aae624ce0faa4c9c3d30e91490dd93ce41b2205d84042c3391d35093a
gatk-bwamem_1.0.4+dfsg2.orig.tar.xz 20.9 KiB 767c56d136ab24f1fc0511b4a5dcf927ba0028fa140c61e97da10dd57291d798
gatk-bwamem_1.0.4+dfsg2-3.debian.tar.xz 10.2 KiB ce78146c4c6a08d9891e033c50bf88e60cda4d0ef7ea09f48fde28b97597fea0

No changes file available.

Binary packages built by this source

libgatk-bwamem-java: interface to call Heng Li's bwa mem aligner from Java code

 BWA (Burrows-Wheeler Aligner) is a software package for mapping low-divergent
 sequences against a large reference genome, such as the human genome. It is
 written in C.
 .
 gatk-bwamem provides a Java library and a shared library to allow one to use
 BWA from Java code.
 .
 This package contains the Java library.

libgatk-bwamem-jni: interface to call Heng Li's bwa mem aligner from Java code (jni)

 BWA (Burrows-Wheeler Aligner) is a software package for mapping low-divergent
 sequences against a large reference genome, such as the human genome. It is
 written in C.
 .
 gatk-bwamem provides a Java library and a shared library to allow one to use
 BWA from Java code.
 .
 This package contains the native library.

libgatk-bwamem-jni-dbgsym: debug symbols for libgatk-bwamem-jni