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gatb-core package

gatb-core 1.4.1+git20191209.9398f28+dfsg-2 source package in Ubuntu

Changelog

gatb-core (1.4.1+git20191209.9398f28+dfsg-2) unstable; urgency=medium

  * Team upload.
  * Add -latomic where needed to fix the build on armel, mipsel & powerpc.
  * new patch to avoid "-msse2" on build hosts that use qemu
  * Simplify library dependencies. Closes: #947964.

 -- Michael R. Crusoe <email address hidden>  Sun, 05 Jan 2020 22:40:32 +0100

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Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

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gatb-core_1.4.1+git20191209.9398f28+dfsg-2.dsc 2.4 KiB f24c6728eb8ad03c05e8fd9e95381badc1dfc81f94756b8897cdd2884c28da41
gatb-core_1.4.1+git20191209.9398f28+dfsg.orig.tar.xz 2.8 MiB 2da66c8a77c255b9ec2670c593bb81b39bbc02bed1d16dc8f0e9afaac843b899
gatb-core_1.4.1+git20191209.9398f28+dfsg-2.debian.tar.xz 98.5 KiB 9a3b2ed1b0fa211509a81934ed3e7115a02071616a2f5c783ee8704f83812c9b

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Binary packages built by this source

gatb-core: Genome Analysis Toolbox with de-Bruijn graph

 The GATB-CORE project provides a set of highly efficient
 algorithms to analyse NGS data sets. These methods enable
 the analysis of data sets of any size on multi-core desktop
 computers, including very huge amount of reads data coming
 from any kind of organisms such as bacteria, plants,
 animals and even complex samples (e.g. metagenomes).
 Read more about GATB at https://gatb.inria.fr/.
 By itself GATB-CORE is not an NGS data analysis tool.
 However, it can be used to create such tools. There already
 exist a set of ready-to-use tools relying on GATB-CORE
 library: see https://gatb.inria.fr/software/

gatb-core-dbgsym: debug symbols for gatb-core
gatb-core-testdata: Genome Analysis Toolbox with de-Bruijn graph (test data)

 The GATB-CORE project provides a set of highly efficient
 algorithms to analyse NGS data sets. These methods enable
 the analysis of data sets of any size on multi-core desktop
 computers, including very huge amount of reads data coming
 from any kind of organisms such as bacteria, plants,
 animals and even complex samples (e.g. metagenomes).
 Read more about GATB at https://gatb.inria.fr/.
 By itself GATB-CORE is not an NGS data analysis tool.
 However, it can be used to create such tools. There already
 exist a set of ready-to-use tools relying on GATB-CORE
 library: see https://gatb.inria.fr/software/
 .
 This package contains some data to test the library.

libgatbcore-dev: development library of the Genome Analysis Toolbox

 The GATB-CORE project provides a set of highly efficient
 algorithms to analyse NGS data sets. These methods enable
 the analysis of data sets of any size on multi-core desktop
 computers, including very huge amount of reads data coming
 from any kind of organisms such as bacteria, plants,
 animals and even complex samples (e.g. metagenomes).
 Read more about GATB at https://gatb.inria.fr/.
 By itself GATB-CORE is not an NGS data analysis tool.
 However, it can be used to create such tools. There already
 exist a set of ready-to-use tools relying on GATB-CORE
 library: see https://gatb.inria.fr/software/
 .
 This package contains the static library and the header files
 of the gatb-core library.

libgatbcore3: dynamic library of the Genome Analysis Toolbox

 The GATB-CORE project provides a set of highly efficient
 algorithms to analyse NGS data sets. These methods enable
 the analysis of data sets of any size on multi-core desktop
 computers, including very huge amount of reads data coming
 from any kind of organisms such as bacteria, plants,
 animals and even complex samples (e.g. metagenomes).
 Read more about GATB at https://gatb.inria.fr/.
 By itself GATB-CORE is not an NGS data analysis tool.
 However, it can be used to create such tools. There already
 exist a set of ready-to-use tools relying on GATB-CORE
 library: see https://gatb.inria.fr/software/
 .
 This package contains the dynamic library.

libgatbcore3-dbgsym: debug symbols for libgatbcore3