freecontact 1.0.21-7 source package in Ubuntu
Changelog
freecontact (1.0.21-7) unstable; urgency=medium * Fix d-shlibmove override to fit gcc-8 Closes: #897750 * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.5 * Do not Build-Depends: automake * Remove useless get-orig-source target * Drop unused lintian override -- Andreas Tille <email address hidden> Thu, 26 Jul 2018 15:32:51 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section |
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Downloads
File | Size | SHA-256 Checksum |
---|---|---|
freecontact_1.0.21-7.dsc | 2.3 KiB | d6c7659d59f408b7a247d548cd92b0784a7e39bd5a61d2e928ead736ceef9410 |
freecontact_1.0.21.orig.tar.xz | 401.0 KiB | 513c503ace70abc3cbc12d1aff616ffd9b6564a73a584efd7435b804479bd2a8 |
freecontact_1.0.21-7.debian.tar.xz | 5.5 KiB | bf4cae5883ee211c2d409d49e01483bf2206bd9507d8b586e5f672da4b13cec5 |
Available diffs
No changes file available.
Binary packages built by this source
- freecontact: No summary available for freecontact in ubuntu cosmic.
No description available for freecontact in ubuntu cosmic.
- freecontact-dbgsym: No summary available for freecontact-dbgsym in ubuntu cosmic.
No description available for freecontact-dbgsym in ubuntu cosmic.
- libfreecontact-dev: No summary available for libfreecontact-dev in ubuntu cosmic.
No description available for libfreecontact-dev in ubuntu cosmic.
- libfreecontact-doc: documentation for libfreecontact
FreeContact is a protein residue contact predictor optimized for speed.
Its input is a multiple sequence alignment. FreeContact can function as an
accelerated drop-in for the published contact predictors
EVfold-mfDCA of DS. Marks (2011) and
PSICOV of D. Jones (2011).
.
FreeContact is accelerated by a combination of vector instructions, multiple
threads, and faster implementation of key parts.
Depending on the alignment, 8-fold or higher speedups are possible.
.
A sufficiently large alignment is required for meaningful results.
As a minimum, an alignment with an effective (after-weighting) sequence count
bigger than the length of the query sequence should be used. Alignments with
tens of thousands of (effective) sequences are considered good input.
.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
can be used to generate the alignments, for example.
.
This package contains HTML documentation for libfreecontact.
- libfreecontact0v5: No summary available for libfreecontact0v5 in ubuntu disco.
No description available for libfreecontact0v5 in ubuntu disco.
- libfreecontact0v5-dbgsym: No summary available for libfreecontact0v5-dbgsym in ubuntu cosmic.
No description available for libfreecontact0
v5-dbgsym in ubuntu cosmic.