Ubuntu
freecontact package

freecontact 1.0.21-12 source package in Ubuntu

Changelog

freecontact (1.0.21-12) unstable; urgency=medium

  * Upstream download vanished
  * Drop useless Pre-Depends

 -- Andreas Tille <email address hidden>  Fri, 21 Jan 2022 08:51:35 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Lunar release universe misc
Jammy release universe misc

Downloads

File Size SHA-256 Checksum
freecontact_1.0.21-12.dsc 2.3 KiB 44fd383096fd785414eea93908c4222ef4670e43a4c5b2646309d569759ba8b3
freecontact_1.0.21.orig.tar.xz 401.0 KiB 513c503ace70abc3cbc12d1aff616ffd9b6564a73a584efd7435b804479bd2a8
freecontact_1.0.21-12.debian.tar.xz 8.3 KiB 07c2c36a658ac0f49ab61c4b33b8003cb1ff5d10d16929b1f051c2aa57d8e5a1

Available diffs

No changes file available.

Binary packages built by this source

freecontact: No summary available for freecontact in ubuntu kinetic.

No description available for freecontact in ubuntu kinetic.

freecontact-dbgsym: debug symbols for freecontact
libfreecontact-dev: fast protein contact predictor library - development files

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains files necessary for developing applications with
 libfreecontact.

libfreecontact-doc: documentation for libfreecontact

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains HTML documentation for libfreecontact.

libfreecontact0v5: fast protein contact predictor library

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains the shared library implementing freecontact.

libfreecontact0v5-dbgsym: debug symbols for libfreecontact0v5