https://launchpad.net/ubuntu/+source/freebayes/1.3.2-3/+build/20745858 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-s390x-011 4.15.0-130-generic #134-Ubuntu SMP Tue Jan 5 20:48:28 UTC 2021 s390x Buildd toolchain package versions: launchpad-buildd_194~476~ubuntu18.04.1 python3-lpbuildd_194~476~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 16 Jan 00:05:03 ntpdate[1691]: adjust time server 10.211.37.1 offset 0.006568 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=hirsute --arch=s390x PACKAGEBUILD-20745858 --image-type chroot /home/buildd/filecache-default/9aaab3d1c3367126bc5b66d2474faf9141147628 Creating target for build PACKAGEBUILD-20745858 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=hirsute --arch=s390x PACKAGEBUILD-20745858 Starting target for build PACKAGEBUILD-20745858 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=hirsute --arch=s390x PACKAGEBUILD-20745858 'deb http://ftpmaster.internal/ubuntu hirsute main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-security main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-updates main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-20745858 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=hirsute --arch=s390x PACKAGEBUILD-20745858 Updating target for build PACKAGEBUILD-20745858 Get:1 http://ftpmaster.internal/ubuntu hirsute InRelease [269 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed InRelease [121 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main s390x Packages [1328 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/universe s390x Packages [12.3 MB] Get:8 http://ftpmaster.internal/ubuntu hirsute/universe Translation-en [5406 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x Packages [114 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main Translation-en [49.6 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x Packages [499 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/universe Translation-en [285 kB] Fetched 21.1 MB in 5s (4532 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libisl23 libperl5.32 libxxhash0 perl-modules-5.32 The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-common binutils-s390x-linux-gnu bsdutils coreutils cpp-10 dash dpkg dpkg-dev fakeroot g++-10 gcc-10 gcc-10-base grep init init-system-helpers libacl1 libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libgcc-10-dev libgcc-s1 libgcrypt20 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgssapi-krb5-2 libidn2-0 libip4tc2 libitm1 libk5crypto3 libkrb5-3 libkrb5support0 liblz4-1 libmount1 libmpc3 libncurses6 libncursesw6 libnpth0 libp11-kit0 libpcre2-8-0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libssl1.1 libstdc++-10-dev libstdc++6 libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login mount ncurses-base ncurses-bin openssl passwd patch perl perl-base readline-common sensible-utils systemd systemd-sysv systemd-timesyncd sysvinit-utils tar tzdata util-linux 107 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 77.8 MB of archives. After this operation, 43.8 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu hirsute/main s390x libcrypt-dev s390x 1:4.4.17-1ubuntu1 [111 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute/main s390x libc6-dev s390x 2.32-0ubuntu6 [1745 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main s390x libc-dev-bin s390x 2.32-0ubuntu6 [29.8 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute/main s390x libcrypt1 s390x 1:4.4.17-1ubuntu1 [84.3 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x linux-libc-dev s390x 5.10.0-12.13 [1161 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main s390x libtirpc-common all 1.3.1-1 [7452 B] Get:7 http://ftpmaster.internal/ubuntu hirsute/main s390x libk5crypto3 s390x 1.17-10ubuntu1 [78.5 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main s390x libgssapi-krb5-2 s390x 1.17-10ubuntu1 [115 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute/main s390x libkrb5-3 s390x 1.17-10ubuntu1 [374 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/main s390x libkrb5support0 s390x 1.17-10ubuntu1 [31.4 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main s390x libssl1.1 s390x 1.1.1f-1ubuntu5 [1044 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main s390x libtirpc-dev s390x 1.3.1-1 [190 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main s390x libtirpc3 s390x 1.3.1-1 [75.1 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main s390x libisl23 s390x 0.23-1 [689 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main s390x libcc1-0 s390x 10.2.1-6ubuntu1 [47.7 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libctf0 s390x 2.35.90.20210113-1ubuntu1 [108 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libctf-nobfd0 s390x 2.35.90.20210113-1ubuntu1 [110 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x binutils-s390x-linux-gnu s390x 2.35.90.20210113-1ubuntu1 [1777 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libbinutils s390x 2.35.90.20210113-1ubuntu1 [441 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x binutils-common s390x 2.35.90.20210113-1ubuntu1 [216 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x binutils s390x 2.35.90.20210113-1ubuntu1 [3352 B] Get:22 http://ftpmaster.internal/ubuntu hirsute/main s390x gcc-10-base s390x 10.2.1-6ubuntu1 [19.7 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main s390x libgcc-s1 s390x 10.2.1-6ubuntu1 [30.3 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main s390x libgomp1 s390x 10.2.1-6ubuntu1 [115 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main s390x libitm1 s390x 10.2.1-6ubuntu1 [28.6 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main s390x libatomic1 s390x 10.2.1-6ubuntu1 [8384 B] Get:27 http://ftpmaster.internal/ubuntu hirsute/main s390x libasan6 s390x 10.2.1-6ubuntu1 [2280 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute/main s390x libubsan1 s390x 10.2.1-6ubuntu1 [907 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main s390x g++-10 s390x 10.2.1-6ubuntu1 [8825 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main s390x libstdc++-10-dev s390x 10.2.1-6ubuntu1 [1738 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main s390x libgcc-10-dev s390x 10.2.1-6ubuntu1 [776 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main s390x gcc-10 s390x 10.2.1-6ubuntu1 [15.1 MB] Get:33 http://ftpmaster.internal/ubuntu hirsute/main s390x cpp-10 s390x 10.2.1-6ubuntu1 [7447 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main s390x libstdc++6 s390x 10.2.1-6ubuntu1 [520 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main s390x libmpc3 s390x 1.2.0-1 [43.6 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main s390x libzstd1 s390x 1.4.8+dfsg-1 [312 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute/main s390x libc6 s390x 2.32-0ubuntu6 [2332 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main s390x base-files s390x 11ubuntu16 [60.4 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main s390x bash s390x 5.1-1ubuntu1 [751 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main s390x bsdutils s390x 1:2.36.1-1ubuntu2 [85.9 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute/main s390x coreutils s390x 8.32-4ubuntu2 [1459 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main s390x tar s390x 1.32+dfsg-1 [307 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x dpkg s390x 1.20.7.1ubuntu1 [1263 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main s390x dash s390x 0.5.11+git20200708+dd9ef66+really0.5.11+git20200708+dd9ef66-5ubuntu1 [112 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main s390x grep s390x 3.6-1 [161 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main s390x login s390x 1:4.8.1-1ubuntu8 [219 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main s390x libncurses6 s390x 6.2+20201114-2 [106 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main s390x libncursesw6 s390x 6.2+20201114-2 [136 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute/main s390x libtinfo6 s390x 6.2+20201114-2 [92.4 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute/main s390x ncurses-bin s390x 6.2+20201114-2 [176 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main s390x perl-modules-5.32 all 5.32.0-6 [2754 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main s390x libperl5.32 s390x 5.32.0-6 [3947 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main s390x perl s390x 5.32.0-6 [225 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main s390x perl-base s390x 5.32.0-6 [1574 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libgdbm6 s390x 1.19-1 [27.9 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libgdbm-compat4 s390x 1.19-1 [6320 B] Get:57 http://ftpmaster.internal/ubuntu hirsute/main s390x util-linux s390x 2.36.1-1ubuntu2 [1072 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libdebconfclient0 s390x 0.256ubuntu1 [6076 B] Get:59 http://ftpmaster.internal/ubuntu hirsute/main s390x base-passwd s390x 3.5.48 [48.5 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x init-system-helpers all 1.60 [37.8 kB] Get:61 http://ftpmaster.internal/ubuntu hirsute/main s390x libc-bin s390x 2.32-0ubuntu6 [599 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute/main s390x ncurses-base all 6.2+20201114-2 [18.4 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/main s390x sysvinit-utils s390x 2.96-5ubuntu1 [20.6 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main s390x libxxhash0 s390x 0.8.0-2 [18.3 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main s390x libgcrypt20 s390x 1.8.7-2ubuntu1 [393 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main s390x liblz4-1 s390x 1.9.3-0ubuntu1 [57.8 kB] Get:67 http://ftpmaster.internal/ubuntu hirsute/main s390x systemd-sysv s390x 247.1-4ubuntu1 [10.3 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute/main s390x libaudit-common all 1:2.8.5-3ubuntu3 [4048 B] Get:69 http://ftpmaster.internal/ubuntu hirsute/main s390x libcap-ng0 s390x 0.7.9-2.2build1 [11.0 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute/main s390x libaudit1 s390x 1:2.8.5-3ubuntu3 [38.1 kB] Get:71 http://ftpmaster.internal/ubuntu hirsute/main s390x libpcre2-8-0 s390x 10.35-2ubuntu1 [110 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main s390x libselinux1 s390x 3.1-2build2 [74.9 kB] Get:73 http://ftpmaster.internal/ubuntu hirsute/main s390x libsemanage-common all 3.1-1build2 [10.0 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute/main s390x libsemanage1 s390x 3.1-1build2 [88.5 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute/main s390x passwd s390x 1:4.8.1-1ubuntu8 [794 kB] Get:76 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x adduser all 3.118ubuntu5 [156 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute/main s390x systemd-timesyncd s390x 247.1-4ubuntu1 [27.1 kB] Get:78 http://ftpmaster.internal/ubuntu hirsute/main s390x libapparmor1 s390x 3.0.0-0ubuntu5 [35.9 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main s390x libblkid1 s390x 2.36.1-1ubuntu2 [128 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute/main s390x libudev1 s390x 247.1-4ubuntu1 [75.0 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main s390x libdevmapper1.02.1 s390x 2:1.02.167-1ubuntu4 [122 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main s390x libuuid1 s390x 2.36.1-1ubuntu2 [21.6 kB] Get:83 http://ftpmaster.internal/ubuntu hirsute/main s390x libcryptsetup12 s390x 2:2.3.4-1ubuntu1 [184 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/main s390x libidn2-0 s390x 2.3.0-5 [51.2 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute/main s390x libp11-kit0 s390x 0.23.22-1 [210 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute/main s390x libgnutls30 s390x 3.7.0-5ubuntu1 [826 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute/main s390x libip4tc2 s390x 1.8.5-3ubuntu4 [20.0 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main s390x libseccomp2 s390x 2.4.3-1ubuntu6 [55.9 kB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main s390x mount s390x 2.36.1-1ubuntu2 [119 kB] Get:90 http://ftpmaster.internal/ubuntu hirsute/main s390x systemd s390x 247.1-4ubuntu1 [4015 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute/main s390x libsystemd0 s390x 247.1-4ubuntu1 [296 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute/main s390x libapt-pkg6.0 s390x 2.1.18 [897 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute/main s390x apt s390x 2.1.18 [1306 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x init s390x 1.60 [6040 B] Get:95 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libacl1 s390x 2.2.53-9 [17.6 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute/main s390x libattr1 s390x 1:2.4.48-6 [12.8 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute/main s390x libmount1 s390x 2.36.1-1ubuntu2 [142 kB] Get:98 http://ftpmaster.internal/ubuntu hirsute/main s390x libsmartcols1 s390x 2.36.1-1ubuntu2 [94.2 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute/main s390x sensible-utils all 0.0.14 [13.5 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute/main s390x libcap2 s390x 1:2.44-1 [18.3 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/main s390x readline-common all 8.1-1 [54.1 kB] Get:102 http://ftpmaster.internal/ubuntu hirsute/main s390x libreadline8 s390x 8.1-1 [143 kB] Get:103 http://ftpmaster.internal/ubuntu hirsute/main s390x libsqlite3-0 s390x 3.34.0-1 [650 kB] Get:104 http://ftpmaster.internal/ubuntu hirsute/main s390x openssl s390x 1.1.1f-1ubuntu5 [615 kB] Get:105 http://ftpmaster.internal/ubuntu hirsute/main s390x tzdata all 2020f-1ubuntu2 [294 kB] Get:106 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x dpkg-dev all 1.20.7.1ubuntu1 [934 kB] Get:107 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libdpkg-perl all 1.20.7.1ubuntu1 [232 kB] Get:108 http://ftpmaster.internal/ubuntu hirsute/main s390x patch s390x 2.7.6-7 [114 kB] Get:109 http://ftpmaster.internal/ubuntu hirsute/main s390x libfakeroot s390x 1.25.3-1.1 [27.5 kB] Get:110 http://ftpmaster.internal/ubuntu hirsute/main s390x fakeroot s390x 1.25.3-1.1 [62.7 kB] Get:111 http://ftpmaster.internal/ubuntu hirsute/main s390x libnpth0 s390x 1.6-3 [8048 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 77.8 MB in 2s (51.2 MB/s) (Reading database ... 12766 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.17-1ubuntu1_s390x.deb ... Unpacking libcrypt-dev:s390x (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Preparing to unpack .../libc6-dev_2.32-0ubuntu6_s390x.deb ... Unpacking libc6-dev:s390x (2.32-0ubuntu6) over (2.32-0ubuntu3) ... Preparing to unpack .../libc-dev-bin_2.32-0ubuntu6_s390x.deb ... Unpacking libc-dev-bin (2.32-0ubuntu6) over (2.32-0ubuntu3) ... Preparing to unpack .../libcrypt1_1%3a4.4.17-1ubuntu1_s390x.deb ... Unpacking libcrypt1:s390x (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Setting up libcrypt1:s390x (1:4.4.17-1ubuntu1) ... (Reading database ... 12765 files and directories currently installed.) Preparing to unpack .../00-linux-libc-dev_5.10.0-12.13_s390x.deb ... Unpacking linux-libc-dev:s390x (5.10.0-12.13) over (5.8.0-25.26) ... Preparing to unpack .../01-libtirpc-common_1.3.1-1_all.deb ... Unpacking libtirpc-common (1.3.1-1) over (1.2.6-1build1) ... Preparing to unpack .../02-libk5crypto3_1.17-10ubuntu1_s390x.deb ... Unpacking libk5crypto3:s390x (1.17-10ubuntu1) over (1.17-10) ... Preparing to unpack .../03-libgssapi-krb5-2_1.17-10ubuntu1_s390x.deb ... Unpacking libgssapi-krb5-2:s390x (1.17-10ubuntu1) over (1.17-10) ... Preparing to unpack .../04-libkrb5-3_1.17-10ubuntu1_s390x.deb ... Unpacking libkrb5-3:s390x (1.17-10ubuntu1) over (1.17-10) ... Preparing to unpack .../05-libkrb5support0_1.17-10ubuntu1_s390x.deb ... Unpacking libkrb5support0:s390x (1.17-10ubuntu1) over (1.17-10) ... Preparing to unpack .../06-libssl1.1_1.1.1f-1ubuntu5_s390x.deb ... Unpacking libssl1.1:s390x (1.1.1f-1ubuntu5) over (1.1.1f-1ubuntu4) ... Preparing to unpack .../07-libtirpc-dev_1.3.1-1_s390x.deb ... Unpacking libtirpc-dev:s390x (1.3.1-1) over (1.2.6-1build1) ... Preparing to unpack .../08-libtirpc3_1.3.1-1_s390x.deb ... Unpacking libtirpc3:s390x (1.3.1-1) over (1.2.6-1build1) ... Selecting previously unselected package libisl23:s390x. Preparing to unpack .../09-libisl23_0.23-1_s390x.deb ... Unpacking libisl23:s390x (0.23-1) ... Preparing to unpack .../10-libcc1-0_10.2.1-6ubuntu1_s390x.deb ... Unpacking libcc1-0:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../11-libctf0_2.35.90.20210113-1ubuntu1_s390x.deb ... Unpacking libctf0:s390x (2.35.90.20210113-1ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../12-libctf-nobfd0_2.35.90.20210113-1ubuntu1_s390x.deb ... Unpacking libctf-nobfd0:s390x (2.35.90.20210113-1ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../13-binutils-s390x-linux-gnu_2.35.90.20210113-1ubuntu1_s390x.deb ... Unpacking binutils-s390x-linux-gnu (2.35.90.20210113-1ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../14-libbinutils_2.35.90.20210113-1ubuntu1_s390x.deb ... Unpacking libbinutils:s390x (2.35.90.20210113-1ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../15-binutils-common_2.35.90.20210113-1ubuntu1_s390x.deb ... Unpacking binutils-common:s390x (2.35.90.20210113-1ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../16-binutils_2.35.90.20210113-1ubuntu1_s390x.deb ... Unpacking binutils (2.35.90.20210113-1ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../17-gcc-10-base_10.2.1-6ubuntu1_s390x.deb ... Unpacking gcc-10-base:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Setting up gcc-10-base:s390x (10.2.1-6ubuntu1) ... (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10.2.1-6ubuntu1_s390x.deb ... Unpacking libgcc-s1:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Setting up libgcc-s1:s390x (10.2.1-6ubuntu1) ... (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../00-libgomp1_10.2.1-6ubuntu1_s390x.deb ... Unpacking libgomp1:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../01-libitm1_10.2.1-6ubuntu1_s390x.deb ... Unpacking libitm1:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../02-libatomic1_10.2.1-6ubuntu1_s390x.deb ... Unpacking libatomic1:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../03-libasan6_10.2.1-6ubuntu1_s390x.deb ... Unpacking libasan6:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../04-libubsan1_10.2.1-6ubuntu1_s390x.deb ... Unpacking libubsan1:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../05-g++-10_10.2.1-6ubuntu1_s390x.deb ... Unpacking g++-10 (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../06-libstdc++-10-dev_10.2.1-6ubuntu1_s390x.deb ... Unpacking libstdc++-10-dev:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../07-libgcc-10-dev_10.2.1-6ubuntu1_s390x.deb ... Unpacking libgcc-10-dev:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../08-gcc-10_10.2.1-6ubuntu1_s390x.deb ... Unpacking gcc-10 (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../09-cpp-10_10.2.1-6ubuntu1_s390x.deb ... Unpacking cpp-10 (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../10-libstdc++6_10.2.1-6ubuntu1_s390x.deb ... Unpacking libstdc++6:s390x (10.2.1-6ubuntu1) over (10.2.0-13ubuntu1) ... Setting up libstdc++6:s390x (10.2.1-6ubuntu1) ... (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../libmpc3_1.2.0-1_s390x.deb ... Unpacking libmpc3:s390x (1.2.0-1) over (1.2.0~rc1-1) ... Preparing to unpack .../libzstd1_1.4.8+dfsg-1_s390x.deb ... Unpacking libzstd1:s390x (1.4.8+dfsg-1) over (1.4.5+dfsg-4) ... Setting up libzstd1:s390x (1.4.8+dfsg-1) ... (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../libc6_2.32-0ubuntu6_s390x.deb ... Unpacking libc6:s390x (2.32-0ubuntu6) over (2.32-0ubuntu3) ... Setting up libc6:s390x (2.32-0ubuntu6) ... (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu16_s390x.deb ... Unpacking base-files (11ubuntu16) over (11ubuntu14) ... Setting up base-files (11ubuntu16) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../bash_5.1-1ubuntu1_s390x.deb ... Unpacking bash (5.1-1ubuntu1) over (5.0-6ubuntu2) ... Setting up bash (5.1-1ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.36.1-1ubuntu2_s390x.deb ... Unpacking bsdutils (1:2.36.1-1ubuntu2) over (1:2.36-3ubuntu1) ... Setting up bsdutils (1:2.36.1-1ubuntu2) ... (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../coreutils_8.32-4ubuntu2_s390x.deb ... Unpacking coreutils (8.32-4ubuntu2) over (8.32-3ubuntu1) ... Setting up coreutils (8.32-4ubuntu2) ... (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../tar_1.32+dfsg-1_s390x.deb ... Unpacking tar (1.32+dfsg-1) over (1.30+dfsg-7) ... Setting up tar (1.32+dfsg-1) ... (Reading database ... 12775 files and directories currently installed.) Preparing to unpack .../dpkg_1.20.7.1ubuntu1_s390x.deb ... Unpacking dpkg (1.20.7.1ubuntu1) over (1.20.5ubuntu2) ... Setting up dpkg (1.20.7.1ubuntu1) ... Installing new version of config file /etc/cron.daily/dpkg ... (Reading database ... 12789 files and directories currently installed.) Preparing to unpack .../dash_0.5.11+git20200708+dd9ef66+really0.5.11+git20200708+dd9ef66-5ubuntu1_s390x.deb ... Unpacking dash (0.5.11+git20200708+dd9ef66+really0.5.11+git20200708+dd9ef66-5ubuntu1) over (0.5.10.2-7) ... Setting up dash (0.5.11+git20200708+dd9ef66+really0.5.11+git20200708+dd9ef66-5ubuntu1) ... (Reading database ... 12789 files and directories currently installed.) Preparing to unpack .../archives/grep_3.6-1_s390x.deb ... Unpacking grep (3.6-1) over (3.4-1) ... Setting up grep (3.6-1) ... (Reading database ... 12790 files and directories currently installed.) Preparing to unpack .../login_1%3a4.8.1-1ubuntu8_s390x.deb ... Unpacking login (1:4.8.1-1ubuntu8) over (1:4.8.1-1ubuntu6) ... Setting up login (1:4.8.1-1ubuntu8) ... Installing new version of config file /etc/login.defs ... (Reading database ... 12790 files and directories currently installed.) Preparing to unpack .../libncurses6_6.2+20201114-2_s390x.deb ... Unpacking libncurses6:s390x (6.2+20201114-2) over (6.2-1) ... Preparing to unpack .../libncursesw6_6.2+20201114-2_s390x.deb ... Unpacking libncursesw6:s390x (6.2+20201114-2) over (6.2-1) ... Preparing to unpack .../libtinfo6_6.2+20201114-2_s390x.deb ... Unpacking libtinfo6:s390x (6.2+20201114-2) over (6.2-1) ... Setting up libtinfo6:s390x (6.2+20201114-2) ... (Reading database ... 12790 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.2+20201114-2_s390x.deb ... Unpacking ncurses-bin (6.2+20201114-2) over (6.2-1) ... Setting up ncurses-bin (6.2+20201114-2) ... (Reading database ... 12790 files and directories currently installed.) Preparing to unpack .../perl_5.32.0-6_s390x.deb ... Unpacking perl (5.32.0-6) over (5.30.3-4) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../perl-modules-5.32_5.32.0-6_all.deb ... Unpacking perl-modules-5.32 (5.32.0-6) ... Selecting previously unselected package libperl5.32:s390x. Preparing to unpack .../libperl5.32_5.32.0-6_s390x.deb ... Unpacking libperl5.32:s390x (5.32.0-6) ... Preparing to unpack .../perl-base_5.32.0-6_s390x.deb ... Unpacking perl-base (5.32.0-6) over (5.30.3-4) ... Setting up perl-base (5.32.0-6) ... (Reading database ... 14710 files and directories currently installed.) Preparing to unpack .../libgdbm6_1.19-1_s390x.deb ... Unpacking libgdbm6:s390x (1.19-1) over (1.18.1-5.1) ... Preparing to unpack .../libgdbm-compat4_1.19-1_s390x.deb ... Unpacking libgdbm-compat4:s390x (1.19-1) over (1.18.1-5.1) ... Preparing to unpack .../util-linux_2.36.1-1ubuntu2_s390x.deb ... Unpacking util-linux (2.36.1-1ubuntu2) over (2.36-3ubuntu1) ... Setting up util-linux (2.36.1-1ubuntu2) ... (Reading database ... 14711 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.256ubuntu1_s390x.deb ... Unpacking libdebconfclient0:s390x (0.256ubuntu1) over (0.252ubuntu1) ... Setting up libdebconfclient0:s390x (0.256ubuntu1) ... (Reading database ... 14711 files and directories currently installed.) Preparing to unpack .../base-passwd_3.5.48_s390x.deb ... Unpacking base-passwd (3.5.48) over (3.5.47) ... Setting up base-passwd (3.5.48) ... Changing home-directory of irc from /var/run/ircd to /run/ircd 1 changes have been made, rewriting files Writing passwd-file to /etc/passwd Writing shadow-file to /etc/shadow Writing group-file to /etc/group (Reading database ... 14711 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.60_all.deb ... Unpacking init-system-helpers (1.60) over (1.58) ... Setting up init-system-helpers (1.60) ... (Reading database ... 14710 files and directories currently installed.) Preparing to unpack .../libc-bin_2.32-0ubuntu6_s390x.deb ... Unpacking libc-bin (2.32-0ubuntu6) over (2.32-0ubuntu3) ... Setting up libc-bin (2.32-0ubuntu6) ... (Reading database ... 14710 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.2+20201114-2_all.deb ... Unpacking ncurses-base (6.2+20201114-2) over (6.2-1) ... Setting up ncurses-base (6.2+20201114-2) ... (Reading database ... 14710 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.96-5ubuntu1_s390x.deb ... Unpacking sysvinit-utils (2.96-5ubuntu1) over (2.96-3ubuntu1) ... Setting up sysvinit-utils (2.96-5ubuntu1) ... Selecting previously unselected package libxxhash0:s390x. (Reading database ... 14710 files and directories currently installed.) Preparing to unpack .../libxxhash0_0.8.0-2_s390x.deb ... Unpacking libxxhash0:s390x (0.8.0-2) ... Setting up libxxhash0:s390x (0.8.0-2) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.8.7-2ubuntu1_s390x.deb ... Unpacking libgcrypt20:s390x (1.8.7-2ubuntu1) over (1.8.5-5ubuntu2) ... Setting up libgcrypt20:s390x (1.8.7-2ubuntu1) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.9.3-0ubuntu1_s390x.deb ... Unpacking liblz4-1:s390x (1.9.3-0ubuntu1) over (1.9.2-2) ... Setting up liblz4-1:s390x (1.9.3-0ubuntu1) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../systemd-sysv_247.1-4ubuntu1_s390x.deb ... Unpacking systemd-sysv (247.1-4ubuntu1) over (246.6-1ubuntu1) ... Preparing to unpack .../libaudit-common_1%3a2.8.5-3ubuntu3_all.deb ... Unpacking libaudit-common (1:2.8.5-3ubuntu3) over (1:2.8.5-3ubuntu1) ... Setting up libaudit-common (1:2.8.5-3ubuntu3) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.7.9-2.2build1_s390x.deb ... Unpacking libcap-ng0:s390x (0.7.9-2.2build1) over (0.7.9-2.2) ... Setting up libcap-ng0:s390x (0.7.9-2.2build1) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a2.8.5-3ubuntu3_s390x.deb ... Unpacking libaudit1:s390x (1:2.8.5-3ubuntu3) over (1:2.8.5-3ubuntu1) ... Setting up libaudit1:s390x (1:2.8.5-3ubuntu3) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.35-2ubuntu1_s390x.deb ... Unpacking libpcre2-8-0:s390x (10.35-2ubuntu1) over (10.34-7) ... Setting up libpcre2-8-0:s390x (10.35-2ubuntu1) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libselinux1_3.1-2build2_s390x.deb ... Unpacking libselinux1:s390x (3.1-2build2) over (3.1-2) ... Setting up libselinux1:s390x (3.1-2build2) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.1-1build2_all.deb ... Unpacking libsemanage-common (3.1-1build2) over (3.1-1) ... Setting up libsemanage-common (3.1-1build2) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libsemanage1_3.1-1build2_s390x.deb ... Unpacking libsemanage1:s390x (3.1-1build2) over (3.1-1) ... Setting up libsemanage1:s390x (3.1-1build2) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.8.1-1ubuntu8_s390x.deb ... Unpacking passwd (1:4.8.1-1ubuntu8) over (1:4.8.1-1ubuntu6) ... Setting up passwd (1:4.8.1-1ubuntu8) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../adduser_3.118ubuntu5_all.deb ... Unpacking adduser (3.118ubuntu5) over (3.118ubuntu2) ... Setting up adduser (3.118ubuntu5) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../systemd-timesyncd_247.1-4ubuntu1_s390x.deb ... Unpacking systemd-timesyncd (247.1-4ubuntu1) over (246.6-1ubuntu1) ... Preparing to unpack .../libapparmor1_3.0.0-0ubuntu5_s390x.deb ... Unpacking libapparmor1:s390x (3.0.0-0ubuntu5) over (3.0.0-0ubuntu1) ... Preparing to unpack .../libblkid1_2.36.1-1ubuntu2_s390x.deb ... Unpacking libblkid1:s390x (2.36.1-1ubuntu2) over (2.36-3ubuntu1) ... Setting up libblkid1:s390x (2.36.1-1ubuntu2) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libudev1_247.1-4ubuntu1_s390x.deb ... Unpacking libudev1:s390x (247.1-4ubuntu1) over (246.6-1ubuntu1) ... Setting up libudev1:s390x (247.1-4ubuntu1) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libdevmapper1.02.1_2%3a1.02.167-1ubuntu4_s390x.deb ... Unpacking libdevmapper1.02.1:s390x (2:1.02.167-1ubuntu4) over (2:1.02.167-1ubuntu3) ... Preparing to unpack .../libuuid1_2.36.1-1ubuntu2_s390x.deb ... Unpacking libuuid1:s390x (2.36.1-1ubuntu2) over (2.36-3ubuntu1) ... Setting up libuuid1:s390x (2.36.1-1ubuntu2) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libcryptsetup12_2%3a2.3.4-1ubuntu1_s390x.deb ... Unpacking libcryptsetup12:s390x (2:2.3.4-1ubuntu1) over (2:2.3.3-1ubuntu6) ... Preparing to unpack .../libidn2-0_2.3.0-5_s390x.deb ... Unpacking libidn2-0:s390x (2.3.0-5) over (2.3.0-1) ... Setting up libidn2-0:s390x (2.3.0-5) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.23.22-1_s390x.deb ... Unpacking libp11-kit0:s390x (0.23.22-1) over (0.23.21-2build1) ... Setting up libp11-kit0:s390x (0.23.22-1) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.7.0-5ubuntu1_s390x.deb ... Unpacking libgnutls30:s390x (3.7.0-5ubuntu1) over (3.6.15-4ubuntu2) ... Setting up libgnutls30:s390x (3.7.0-5ubuntu1) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../libip4tc2_1.8.5-3ubuntu4_s390x.deb ... Unpacking libip4tc2:s390x (1.8.5-3ubuntu4) over (1.8.5-3ubuntu1) ... Preparing to unpack .../libseccomp2_2.4.3-1ubuntu6_s390x.deb ... Unpacking libseccomp2:s390x (2.4.3-1ubuntu6) over (2.4.3-1ubuntu4) ... Setting up libseccomp2:s390x (2.4.3-1ubuntu6) ... (Reading database ... 14715 files and directories currently installed.) Preparing to unpack .../mount_2.36.1-1ubuntu2_s390x.deb ... Unpacking mount (2.36.1-1ubuntu2) over (2.36-3ubuntu1) ... Preparing to unpack .../systemd_247.1-4ubuntu1_s390x.deb ... Unpacking systemd (247.1-4ubuntu1) over (246.6-1ubuntu1) ... Preparing to unpack .../libsystemd0_247.1-4ubuntu1_s390x.deb ... Unpacking libsystemd0:s390x (247.1-4ubuntu1) over (246.6-1ubuntu1) ... Setting up libsystemd0:s390x (247.1-4ubuntu1) ... (Reading database ... 14723 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.1.18_s390x.deb ... Unpacking libapt-pkg6.0:s390x (2.1.18) over (2.1.10) ... Setting up libapt-pkg6.0:s390x (2.1.18) ... (Reading database ... 14723 files and directories currently installed.) Preparing to unpack .../archives/apt_2.1.18_s390x.deb ... Unpacking apt (2.1.18) over (2.1.10) ... Setting up apt (2.1.18) ... Installing new version of config file /etc/kernel/postinst.d/apt-auto-removal ... Setting up libapparmor1:s390x (3.0.0-0ubuntu5) ... Setting up libdevmapper1.02.1:s390x (2:1.02.167-1ubuntu4) ... Setting up libssl1.1:s390x (1.1.1f-1ubuntu5) ... Setting up libcryptsetup12:s390x (2:2.3.4-1ubuntu1) ... Setting up libip4tc2:s390x (1.8.5-3ubuntu4) ... Setting up mount (2.36.1-1ubuntu2) ... Setting up systemd-timesyncd (247.1-4ubuntu1) ... Setting up systemd (247.1-4ubuntu1) ... Installing new version of config file /etc/systemd/logind.conf ... Installing new version of config file /etc/systemd/resolved.conf ... Installing new version of config file /etc/systemd/system.conf ... Initializing machine ID from random generator. Removing obsolete conffile /etc/pam.d/systemd-user ... Setting up systemd-sysv (247.1-4ubuntu1) ... (Reading database ... 14727 files and directories currently installed.) Preparing to unpack .../archives/init_1.60_s390x.deb ... Unpacking init (1.60) over (1.58) ... Preparing to unpack .../libacl1_2.2.53-9_s390x.deb ... Unpacking libacl1:s390x (2.2.53-9) over (2.2.53-8) ... Setting up libacl1:s390x (2.2.53-9) ... (Reading database ... 14727 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.4.48-6_s390x.deb ... Unpacking libattr1:s390x (1:2.4.48-6) over (1:2.4.48-5) ... Setting up libattr1:s390x (1:2.4.48-6) ... (Reading database ... 14727 files and directories currently installed.) Preparing to unpack .../libmount1_2.36.1-1ubuntu2_s390x.deb ... Unpacking libmount1:s390x (2.36.1-1ubuntu2) over (2.36-3ubuntu1) ... Setting up libmount1:s390x (2.36.1-1ubuntu2) ... (Reading database ... 14727 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.36.1-1ubuntu2_s390x.deb ... Unpacking libsmartcols1:s390x (2.36.1-1ubuntu2) over (2.36-3ubuntu1) ... Setting up libsmartcols1:s390x (2.36.1-1ubuntu2) ... (Reading database ... 14727 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) over (0.0.13) ... Preparing to unpack .../01-libcap2_1%3a2.44-1_s390x.deb ... Unpacking libcap2:s390x (1:2.44-1) over (1:2.43-1) ... Preparing to unpack .../02-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) over (8.0-4) ... Preparing to unpack .../03-libreadline8_8.1-1_s390x.deb ... Unpacking libreadline8:s390x (8.1-1) over (8.0-4) ... Preparing to unpack .../04-libsqlite3-0_3.34.0-1_s390x.deb ... Unpacking libsqlite3-0:s390x (3.34.0-1) over (3.33.0-1) ... Preparing to unpack .../05-openssl_1.1.1f-1ubuntu5_s390x.deb ... Unpacking openssl (1.1.1f-1ubuntu5) over (1.1.1f-1ubuntu4) ... Preparing to unpack .../06-tzdata_2020f-1ubuntu2_all.deb ... Unpacking tzdata (2020f-1ubuntu2) over (2020b-1ubuntu1) ... Preparing to unpack .../07-dpkg-dev_1.20.7.1ubuntu1_all.deb ... Unpacking dpkg-dev (1.20.7.1ubuntu1) over (1.20.5ubuntu2) ... Preparing to unpack .../08-libdpkg-perl_1.20.7.1ubuntu1_all.deb ... Unpacking libdpkg-perl (1.20.7.1ubuntu1) over (1.20.5ubuntu2) ... Preparing to unpack .../09-patch_2.7.6-7_s390x.deb ... Unpacking patch (2.7.6-7) over (2.7.6-6) ... Preparing to unpack .../10-libfakeroot_1.25.3-1.1_s390x.deb ... Unpacking libfakeroot:s390x (1.25.3-1.1) over (1.25.2-1) ... Preparing to unpack .../11-fakeroot_1.25.3-1.1_s390x.deb ... Unpacking fakeroot (1.25.3-1.1) over (1.25.2-1) ... Preparing to unpack .../12-libnpth0_1.6-3_s390x.deb ... Unpacking libnpth0:s390x (1.6-3) over (1.6-2) ... Setting up init (1.60) ... Setting up libtirpc-common (1.3.1-1) ... Setting up perl-modules-5.32 (5.32.0-6) ... Setting up libsqlite3-0:s390x (3.34.0-1) ... Setting up binutils-common:s390x (2.35.90.20210113-1ubuntu1) ... Setting up linux-libc-dev:s390x (5.10.0-12.13) ... Setting up libctf-nobfd0:s390x (2.35.90.20210113-1ubuntu1) ... Setting up libnpth0:s390x (1.6-3) ... Setting up libgomp1:s390x (10.2.1-6ubuntu1) ... Setting up libcap2:s390x (1:2.44-1) ... Setting up libfakeroot:s390x (1.25.3-1.1) ... Setting up libasan6:s390x (10.2.1-6ubuntu1) ... Setting up libkrb5support0:s390x (1.17-10ubuntu1) ... Setting up tzdata (2020f-1ubuntu2) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Jan 16 00:05:28 UTC 2021. Universal Time is now: Sat Jan 16 00:05:28 UTC 2021. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.25.3-1.1) ... Setting up libncurses6:s390x (6.2+20201114-2) ... Setting up libmpc3:s390x (1.2.0-1) ... Setting up libatomic1:s390x (10.2.1-6ubuntu1) ... Setting up patch (2.7.6-7) ... Setting up libncursesw6:s390x (6.2+20201114-2) ... Setting up libk5crypto3:s390x (1.17-10ubuntu1) ... Setting up libubsan1:s390x (10.2.1-6ubuntu1) ... Setting up sensible-utils (0.0.14) ... Setting up libcrypt-dev:s390x (1:4.4.17-1ubuntu1) ... Setting up libkrb5-3:s390x (1.17-10ubuntu1) ... Setting up libbinutils:s390x (2.35.90.20210113-1ubuntu1) ... Setting up libisl23:s390x (0.23-1) ... Setting up libc-dev-bin (2.32-0ubuntu6) ... Setting up openssl (1.1.1f-1ubuntu5) ... Setting up readline-common (8.1-1) ... Setting up libcc1-0:s390x (10.2.1-6ubuntu1) ... Setting up cpp-10 (10.2.1-6ubuntu1) ... Setting up libitm1:s390x (10.2.1-6ubuntu1) ... Setting up libgdbm6:s390x (1.19-1) ... Setting up libctf0:s390x (2.35.90.20210113-1ubuntu1) ... Setting up binutils-s390x-linux-gnu (2.35.90.20210113-1ubuntu1) ... Setting up libgcc-10-dev:s390x (10.2.1-6ubuntu1) ... Setting up libreadline8:s390x (8.1-1) ... Setting up binutils (2.35.90.20210113-1ubuntu1) ... Setting up libgssapi-krb5-2:s390x (1.17-10ubuntu1) ... Setting up libgdbm-compat4:s390x (1.19-1) ... Setting up libperl5.32:s390x (5.32.0-6) ... Setting up gcc-10 (10.2.1-6ubuntu1) ... Setting up libtirpc3:s390x (1.3.1-1) ... Setting up perl (5.32.0-6) ... Setting up libtirpc-dev:s390x (1.3.1-1) ... Setting up libdpkg-perl (1.20.7.1ubuntu1) ... Setting up libc6-dev:s390x (2.32-0ubuntu6) ... Setting up libstdc++-10-dev:s390x (10.2.1-6ubuntu1) ... Setting up g++-10 (10.2.1-6ubuntu1) ... Setting up dpkg-dev (1.20.7.1ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu6) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20745858 s390x hirsute-proposed -c chroot:build-PACKAGEBUILD-20745858 --arch=s390x --dist=hirsute-proposed --nolog freebayes_1.3.2-3.dsc Initiating build PACKAGEBUILD-20745858 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-130-generic #134-Ubuntu SMP Tue Jan 5 20:48:28 UTC 2021 s390x sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-s390x-011.buildd +==============================================================================+ | freebayes 1.3.2-3 (s390x) Sat, 16 Jan 2021 00:05:28 +0000 | +==============================================================================+ Package: freebayes Version: 1.3.2-3 Source Version: 1.3.2-3 Distribution: hirsute-proposed Machine Architecture: s390x Host Architecture: s390x Build Architecture: s390x Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20745858/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- freebayes_1.3.2-3.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/freebayes-JKwsYv/freebayes-1.3.2' with '<>' I: NOTICE: Log filtering will replace 'build/freebayes-JKwsYv' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-O69cKU/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-O69cKU/apt_archive ./ InRelease Get:2 copy:/<>/resolver-O69cKU/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-O69cKU/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-O69cKU/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-O69cKU/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (162 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-O69cKU/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14763 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, pkg-config, python3, zlib1g-dev, libbamtools-dev, libvcflib-dev (>= 1.0.0~rc2+dfsg-3~), libtabixpp-dev, libseqlib-dev (>= 1.1.2+dfsg-5), bc, samtools, parallel, libvcflib-tools (>= 1.0.0~rc1+dfsg1-6) Filtered Build-Depends: debhelper-compat (= 13), cmake, pkg-config, python3, zlib1g-dev, libbamtools-dev, libvcflib-dev (>= 1.0.0~rc2+dfsg-3~), libtabixpp-dev, libseqlib-dev (>= 1.1.2+dfsg-5), bc, samtools, parallel, libvcflib-tools (>= 1.0.0~rc1+dfsg1-6) dpkg-deb: building package 'sbuild-build-depends-freebayes-dummy' in '/<>/resolver-O69cKU/apt_archive/sbuild-build-depends-freebayes-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-freebayes-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-O69cKU/apt_archive ./ InRelease Get:2 copy:/<>/resolver-O69cKU/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-O69cKU/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-O69cKU/apt_archive ./ Sources [610 B] Get:5 copy:/<>/resolver-O69cKU/apt_archive ./ Packages [684 B] Fetched 2257 B in 0s (223 kB/s) Reading package lists... Reading package lists... Install freebayes build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bc bsdextrautils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasn1-8-heimdal libbamtools-dev libbamtools2.5.1 libblas3 libbrotli1 libbsd0 libbwa-dev libcairo2 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdatrie1 libdebhelper-perl libdeflate-dev libdeflate0 libdisorder-dev libdisorder0 libelf1 libexpat1 libfastahack-dev libfastahack0 libfile-stripnondeterminism-perl libfml-dev libfml0 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi3-heimdal libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts-dev libhts3 libhx509-5-heimdal libice6 libicu67 libjbig0 libjpeg-turbo8 libjpeg8 libjsoncpp-dev libjsoncpp24 libkrb5-26-heimdal liblapack3 libldap-2.4-2 liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libseqlib-dev libseqlib1 libsigsegv2 libsm6 libsmithwaterman-dev libsmithwaterman0 libssh-4 libssw-dev libssw0 libsub-override-perl libtabixpp-dev libtabixpp0 libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0 libuv1 libvcflib-dev libvcflib-tools libvcflib1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 littler m4 mailcap man-db media-types mime-support parallel pkg-config po-debconf python3 python3-minimal python3.9 python3.9-minimal r-base-core r-cran-assertthat r-cran-backports r-cran-brio r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gridbase r-cran-gtable r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plyr r-cran-praise r-cran-prettyunits r-cran-processx r-cran-ps r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-rematch2 r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-waldo r-cran-withr samtools sysstat ucf unzip x11-common xdg-utils zip zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libbamtools-doc libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev liblzma-doc lm-sensors tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler gcj-jdk r-cran-pracma m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.9-venv python3.9-doc binfmt-support elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-covr r-cran-htmlwidgets r-cran-knitr r-cran-rmarkdown r-cran-prettycode r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs r-cran-dplyr r-cran-png r-cran-jpeg r-cran-viridis r-cran-unitizer r-cran-hmisc r-cran-maps r-cran-maptools r-cran-multcomp r-cran-rpart r-cran-sf r-cran-svglite r-cran-dbi r-cran-rsqlite r-cran-r.utils r-cran-forcats r-cran-stringr r-cran-magick r-cran-httr r-cran-curl r-cran-getopt r-cran-bit64 r-cran-bitops r-cran-doparallel r-cran-foreach r-cran-iterators r-cran-itertools r-cran-inline r-cran-mockr r-cran-dichromat r-cran-mockery r-cran-usethis r-cran-blob r-cran-hms r-cran-htmltools r-cran-purrr r-cran-tidyr r-cran-zeallot cwltool isag Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libldap-common publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl r-recommended r-base-dev r-doc-html r-cran-cliapp r-cran-mockery r-cran-sp r-cran-mapproj r-cran-hexbin r-cran-vdiffr r-cran-quantreg r-cran-xml2 r-cran-lubridate r-cran-domc r-cran-abind r-cran-codetools r-cran-curl r-cran-rmarkdown r-cran-bit64 r-cran-hms r-cran-data.table r-cran-rsqlite r-cran-knitr r-cran-dplyr r-cran-mockr r-cran-generics r-cran-dbi libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bc bsdextrautils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasn1-8-heimdal libbamtools-dev libbamtools2.5.1 libblas3 libbrotli1 libbsd0 libbwa-dev libcairo2 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdatrie1 libdebhelper-perl libdeflate-dev libdeflate0 libdisorder-dev libdisorder0 libelf1 libexpat1 libfastahack-dev libfastahack0 libfile-stripnondeterminism-perl libfml-dev libfml0 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi3-heimdal libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts-dev libhts3 libhx509-5-heimdal libice6 libicu67 libjbig0 libjpeg-turbo8 libjpeg8 libjsoncpp-dev libjsoncpp24 libkrb5-26-heimdal liblapack3 libldap-2.4-2 liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libseqlib-dev libseqlib1 libsigsegv2 libsm6 libsmithwaterman-dev libsmithwaterman0 libssh-4 libssw-dev libssw0 libsub-override-perl libtabixpp-dev libtabixpp0 libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0 libuv1 libvcflib-dev libvcflib-tools libvcflib1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 littler m4 mailcap man-db media-types mime-support parallel pkg-config po-debconf python3 python3-minimal python3.9 python3.9-minimal r-base-core r-cran-assertthat r-cran-backports r-cran-brio r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gridbase r-cran-gtable r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plyr r-cran-praise r-cran-prettyunits r-cran-processx r-cran-ps r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-rematch2 r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-waldo r-cran-withr samtools sbuild-build-depends-freebayes-dummy sysstat ucf unzip x11-common xdg-utils zip zlib1g-dev 0 upgraded, 208 newly installed, 0 to remove and 0 not upgraded. Need to get 109 MB of archives. After this operation, 297 MB of additional disk space will be used. Get:1 copy:/<>/resolver-O69cKU/apt_archive ./ sbuild-build-depends-freebayes-dummy 0.invalid.0 [964 B] Get:2 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libpython3.9-minimal s390x 3.9.1-2 [749 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main s390x libexpat1 s390x 2.2.10-1 [86.5 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x python3.9-minimal s390x 3.9.1-2 [1891 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x python3-minimal s390x 3.9.1-1 [24.0 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main s390x media-types all 3.0.0 [21.6 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/main s390x mailcap all 3.68ubuntu1 [24.1 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main s390x mime-support all 3.66 [3696 B] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libpython3.9-stdlib s390x 3.9.1-2 [1726 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x python3.9 s390x 3.9.1-2 [417 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libpython3-stdlib s390x 3.9.1-1 [7244 B] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x python3 s390x 3.9.1-1 [48.8 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main s390x bsdextrautils s390x 2.36.1-1ubuntu2 [77.5 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main s390x libuchardet0 s390x 0.0.7-1 [67.5 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main s390x groff-base s390x 1.22.4-5 [812 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main s390x libpipeline1 s390x 1.5.3-1 [28.7 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main s390x man-db s390x 2.9.3-2 [1106 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main s390x libmagic-mgc s390x 1:5.39-3 [229 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main s390x libmagic1 s390x 1:5.39-3 [83.6 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main s390x file s390x 1:5.39-3 [24.0 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/main s390x libbsd0 s390x 0.10.0-1 [43.7 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute/main s390x libelf1 s390x 0.182-3 [48.4 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main s390x libfribidi0 s390x 1.0.8-2 [24.6 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main s390x libglib2.0-0 s390x 2.66.4-1 [1322 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main s390x libicu67 s390x 67.1-5 [8472 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main s390x libxml2 s390x 2.9.10+dfsg-6.3build1 [645 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute/main s390x ucf all 3.0043 [56.1 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x gettext-base s390x 0.21-3ubuntu1 [41.2 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main s390x libpsl5 s390x 0.21.0-1.1ubuntu1 [52.5 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main s390x libuv1 s390x 1.40.0-1 [78.7 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main s390x libxau6 s390x 1:1.0.9-0ubuntu1 [7212 B] Get:32 http://ftpmaster.internal/ubuntu hirsute/main s390x libxdmcp6 s390x 1:1.1.3-0ubuntu1 [10.4 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute/main s390x libxcb1 s390x 1.14-2.1 [45.0 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main s390x libx11-data all 2:1.7.0-2 [112 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main s390x libx11-6 s390x 2:1.7.0-2 [571 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main s390x libxext6 s390x 2:1.3.4-0ubuntu1 [27.0 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute/main s390x libsigsegv2 s390x 2.12-3 [14.0 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main s390x m4 s390x 1.4.18-5 [209 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main s390x autoconf all 2.69-14 [293 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main s390x autotools-dev all 20180224.1+nmu1 [39.4 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute/main s390x automake all 1:1.16.3-2ubuntu1 [552 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x autopoint all 0.21-3ubuntu1 [423 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute/main s390x bc s390x 1.07.1-2build2 [84.7 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main s390x cmake-data all 3.18.4-1ubuntu3 [1705 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main s390x libarchive13 s390x 3.4.3-2 [374 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main s390x libbrotli1 s390x 1.0.9-2build2 [271 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main s390x libroken18-heimdal s390x 7.7.0+dfsg-2 [40.0 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main s390x libasn1-8-heimdal s390x 7.7.0+dfsg-2 [148 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute/main s390x libheimbase1-heimdal s390x 7.7.0+dfsg-2 [27.7 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute/main s390x libhcrypto4-heimdal s390x 7.7.0+dfsg-2 [83.1 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main s390x libwind0-heimdal s390x 7.7.0+dfsg-2 [47.7 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main s390x libhx509-5-heimdal s390x 7.7.0+dfsg-2 [97.9 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main s390x libkrb5-26-heimdal s390x 7.7.0+dfsg-2 [191 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main s390x libheimntlm0-heimdal s390x 7.7.0+dfsg-2 [14.4 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main s390x libgssapi3-heimdal s390x 7.7.0+dfsg-2 [87.2 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main s390x libsasl2-modules-db s390x 2.1.27+dfsg-2ubuntu1 [14.5 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute/main s390x libsasl2-2 s390x 2.1.27+dfsg-2ubuntu1 [48.8 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute/main s390x libldap-2.4-2 s390x 2.4.56+dfsg-1ubuntu1 [158 kB] Get:59 http://ftpmaster.internal/ubuntu hirsute/main s390x libnghttp2-14 s390x 1.42.0-1 [77.5 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2build2 [50.7 kB] Get:61 http://ftpmaster.internal/ubuntu hirsute/main s390x libssh-4 s390x 0.9.5-1 [174 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libcurl4 s390x 7.74.0-1ubuntu1 [247 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/main s390x libjsoncpp24 s390x 1.9.4-4 [72.6 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main s390x librhash0 s390x 1.4.1-1 [121 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main s390x cmake s390x 3.18.4-1ubuntu3 [6279 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main s390x libtool all 2.4.6-15 [161 kB] Get:67 http://ftpmaster.internal/ubuntu hirsute/main s390x dh-autoreconf all 19 [16.1 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute/main s390x libdebhelper-perl all 13.3.1ubuntu1 [62.2 kB] Get:69 http://ftpmaster.internal/ubuntu hirsute/main s390x libarchive-zip-perl all 1.68-1 [90.2 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute/main s390x libsub-override-perl all 0.09-2 [9532 B] Get:71 http://ftpmaster.internal/ubuntu hirsute/main s390x libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main s390x dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:73 http://ftpmaster.internal/ubuntu hirsute/main s390x dwz s390x 0.13+20201015-2 [168 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x gettext s390x 0.21-3ubuntu1 [869 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute/main s390x intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:76 http://ftpmaster.internal/ubuntu hirsute/main s390x po-debconf all 1.0.21+nmu1 [233 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute/main s390x debhelper all 13.3.1ubuntu1 [882 kB] Get:78 http://ftpmaster.internal/ubuntu hirsute/main s390x libfreetype6 s390x 2.10.4+dfsg-1 [383 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main s390x fonts-dejavu-core all 2.37-2 [1041 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute/main s390x fontconfig-config all 2.13.1-4.2ubuntu2 [28.6 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main s390x libfontconfig1 s390x 2.13.1-4.2ubuntu2 [152 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main s390x fontconfig s390x 2.13.1-4.2ubuntu2 [182 kB] Get:83 http://ftpmaster.internal/ubuntu hirsute/universe s390x libbamtools2.5.1 s390x 2.5.1+dfsg-7build1 [155 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/universe s390x libbamtools-dev s390x 2.5.1+dfsg-7build1 [221 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute/main s390x libblas3 s390x 3.9.0-3ubuntu1 [131 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute/universe s390x libbwa-dev s390x 0.7.17-5 [150 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute/main s390x libpixman-1-0 s390x 0.40.0-1 [154 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main s390x libxcb-render0 s390x 1.14-2.1 [14.7 kB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main s390x libxcb-shm0 s390x 1.14-2.1 [5436 B] Get:90 http://ftpmaster.internal/ubuntu hirsute/main s390x libxrender1 s390x 1:0.9.10-1 [17.8 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libcairo2 s390x 1.16.0-5 [655 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libcurl3-gnutls s390x 7.74.0-1ubuntu1 [247 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libcurl4-gnutls-dev s390x 7.74.0-1ubuntu1 [351 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute/main s390x libdatrie1 s390x 0.2.12-3 [18.1 kB] Get:95 http://ftpmaster.internal/ubuntu hirsute/universe s390x libdeflate0 s390x 1.7-1 [63.8 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute/universe s390x libdeflate-dev s390x 1.7-1 [45.0 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute/universe s390x libdisorder0 s390x 0.0.2+git20130809.8062ee1-2 [4404 B] Get:98 http://ftpmaster.internal/ubuntu hirsute/universe s390x libdisorder-dev s390x 0.0.2+git20130809.8062ee1-2 [3800 B] Get:99 http://ftpmaster.internal/ubuntu hirsute/universe s390x libfastahack0 s390x 1.0.0+dfsg-7 [26.7 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute/universe s390x libfastahack-dev s390x 1.0.0+dfsg-7 [29.0 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/universe s390x libfml0 s390x 0.1+git20190320.b499514-1 [68.0 kB] Get:102 http://ftpmaster.internal/ubuntu hirsute/main s390x zlib1g-dev s390x 1:1.2.11.dfsg-2ubuntu4 [166 kB] Get:103 http://ftpmaster.internal/ubuntu hirsute/universe s390x libfml-dev s390x 0.1+git20190320.b499514-1 [78.9 kB] Get:104 http://ftpmaster.internal/ubuntu hirsute/main s390x libgfortran5 s390x 10.2.1-6ubuntu1 [414 kB] Get:105 http://ftpmaster.internal/ubuntu hirsute/main s390x libgraphite2-3 s390x 1.3.14-1 [67.9 kB] Get:106 http://ftpmaster.internal/ubuntu hirsute/main s390x libharfbuzz0b s390x 2.6.7-1ubuntu1 [334 kB] Get:107 http://ftpmaster.internal/ubuntu hirsute/universe s390x libhts3 s390x 1.11-4 [355 kB] Get:108 http://ftpmaster.internal/ubuntu hirsute/main s390x liblzma-dev s390x 5.2.4-1ubuntu1 [146 kB] Get:109 http://ftpmaster.internal/ubuntu hirsute/universe s390x libhts-dev s390x 1.11-4 [3937 kB] Get:110 http://ftpmaster.internal/ubuntu hirsute/main s390x x11-common all 1:7.7+19ubuntu15 [22.2 kB] Get:111 http://ftpmaster.internal/ubuntu hirsute/main s390x libice6 s390x 2:1.0.10-1 [39.5 kB] Get:112 http://ftpmaster.internal/ubuntu hirsute/main s390x libjpeg-turbo8 s390x 2.0.3-0ubuntu2 [102 kB] Get:113 http://ftpmaster.internal/ubuntu hirsute/main s390x libjpeg8 s390x 8c-2ubuntu8 [2142 B] Get:114 http://ftpmaster.internal/ubuntu hirsute/main s390x liblapack3 s390x 3.9.0-3ubuntu1 [1731 kB] Get:115 http://ftpmaster.internal/ubuntu hirsute/main s390x libthai-data all 0.1.28-3 [134 kB] Get:116 http://ftpmaster.internal/ubuntu hirsute/main s390x libthai0 s390x 0.1.28-3 [18.1 kB] Get:117 http://ftpmaster.internal/ubuntu hirsute/main s390x libpango-1.0-0 s390x 1.46.2-3 [174 kB] Get:118 http://ftpmaster.internal/ubuntu hirsute/main s390x libpangoft2-1.0-0 s390x 1.46.2-3 [35.3 kB] Get:119 http://ftpmaster.internal/ubuntu hirsute/main s390x libpangocairo-1.0-0 s390x 1.46.2-3 [25.1 kB] Get:120 http://ftpmaster.internal/ubuntu hirsute/main s390x libpaper1 s390x 1.1.28 [12.7 kB] Get:121 http://ftpmaster.internal/ubuntu hirsute/main s390x libpaper-utils s390x 1.1.28 [8184 B] Get:122 http://ftpmaster.internal/ubuntu hirsute/main s390x libsensors-config all 1:3.6.0-2ubuntu1 [6092 B] Get:123 http://ftpmaster.internal/ubuntu hirsute/main s390x libsensors5 s390x 1:3.6.0-2ubuntu1 [25.6 kB] Get:124 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x libssw0 s390x 1.1-12 [24.6 kB] Get:125 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x libseqlib1 s390x 1.1.2+dfsg-9ubuntu3 [114 kB] Get:126 http://ftpmaster.internal/ubuntu hirsute/main s390x libjsoncpp-dev s390x 1.9.4-4 [22.0 kB] Get:127 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x libssw-dev s390x 1.1-12 [27.0 kB] Get:128 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x libseqlib-dev s390x 1.1.2+dfsg-9ubuntu3 [164 kB] Get:129 http://ftpmaster.internal/ubuntu hirsute/main s390x libsm6 s390x 2:1.2.3-1 [15.2 kB] Get:130 http://ftpmaster.internal/ubuntu hirsute/universe s390x libsmithwaterman0 s390x 0.0+git20160702.2610e25-11 [36.1 kB] Get:131 http://ftpmaster.internal/ubuntu hirsute/universe s390x libsmithwaterman-dev s390x 0.0+git20160702.2610e25-11 [40.0 kB] Get:132 http://ftpmaster.internal/ubuntu hirsute/universe s390x libtabixpp0 s390x 1.1.0-3 [8648 B] Get:133 http://ftpmaster.internal/ubuntu hirsute/universe s390x libtabixpp-dev s390x 1.1.0-3 [6964 B] Get:134 http://ftpmaster.internal/ubuntu hirsute/main s390x libtcl8.6 s390x 8.6.11+dfsg-1 [955 kB] Get:135 http://ftpmaster.internal/ubuntu hirsute/main s390x libjbig0 s390x 2.1-3.1build1 [26.3 kB] Get:136 http://ftpmaster.internal/ubuntu hirsute/main s390x libwebp6 s390x 0.6.1-2 [149 kB] Get:137 http://ftpmaster.internal/ubuntu hirsute-proposed/main s390x libtiff5 s390x 4.2.0-1 [167 kB] Get:138 http://ftpmaster.internal/ubuntu hirsute/main s390x libxft2 s390x 2.3.3-0ubuntu1 [36.8 kB] Get:139 http://ftpmaster.internal/ubuntu hirsute/main s390x libxss1 s390x 1:1.2.3-1 [7972 B] Get:140 http://ftpmaster.internal/ubuntu hirsute/main s390x libtk8.6 s390x 8.6.11-1 [792 kB] Get:141 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x libvcflib1 s390x 1.0.1+dfsg-4 [142 kB] Get:142 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x libvcflib-dev s390x 1.0.1+dfsg-4 [27.0 kB] Get:143 http://ftpmaster.internal/ubuntu hirsute/main s390x zip s390x 3.0-11build1 [157 kB] Get:144 http://ftpmaster.internal/ubuntu hirsute/main s390x unzip s390x 6.0-25ubuntu1 [157 kB] Get:145 http://ftpmaster.internal/ubuntu hirsute/main s390x xdg-utils all 1.1.3-2ubuntu2 [61.5 kB] Get:146 http://ftpmaster.internal/ubuntu hirsute/main s390x libxt6 s390x 1:1.2.0-1 [169 kB] Get:147 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-base-core s390x 4.0.3-1 [25.0 MB] Get:148 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-littler s390x 0.3.12-1 [82.4 kB] Get:149 http://ftpmaster.internal/ubuntu hirsute/universe s390x littler all 0.3.12-1 [2380 B] Get:150 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-pkgkitten all 0.2.0-1 [23.6 kB] Get:151 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x r-cran-rcpp s390x 1.0.6-1 [1936 kB] Get:152 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-plyr s390x 1.8.6-2build1 [830 kB] Get:153 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-digest s390x 0.6.27-1 [175 kB] Get:154 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-glue s390x 1.4.2-1 [134 kB] Get:155 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-gtable all 0.3.0+dfsg-2build1 [138 kB] Get:156 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-brio s390x 1.1.0-2 [31.6 kB] Get:157 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-ps s390x 1.4.0-1 [250 kB] Get:158 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-r6 all 2.5.0-1 [98.5 kB] Get:159 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-processx s390x 3.4.5-1 [295 kB] Get:160 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-callr all 3.5.1-1 [386 kB] Get:161 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-assertthat all 0.2.1-2build1 [56.5 kB] Get:162 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-crayon all 1.3.4-5 [498 kB] Get:163 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-fansi s390x 0.4.1-1build1 [340 kB] Get:164 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x r-cran-cli all 2.2.0-1 [442 kB] Get:165 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-backports s390x 1.2.1-1 [88.9 kB] Get:166 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-rprojroot all 1.3-2-3build1 [98.1 kB] Get:167 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-desc all 1.2.0-3build1 [299 kB] Get:168 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-rlang s390x 0.4.8-1 [1146 kB] Get:169 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-ellipsis s390x 0.3.1-1build1 [31.6 kB] Get:170 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-evaluate all 0.14-2build1 [81.4 kB] Get:171 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-jsonlite s390x 1.7.2+dfsg-1 [447 kB] Get:172 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-lifecycle all 0.2.0-2build1 [93.3 kB] Get:173 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x r-cran-magrittr s390x 2.0.1-1 [149 kB] Get:174 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-prettyunits all 1.1.1-2build1 [39.6 kB] Get:175 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x r-cran-withr all 2.3.0-1 [195 kB] Get:176 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-pkgbuild all 1.1.0-1 [145 kB] Get:177 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-rstudioapi all 0.13-1 [256 kB] Get:178 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-pkgload s390x 1.1.0-1 [168 kB] Get:179 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB] Get:180 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-diffobj s390x 0.3.2-1 [1067 kB] Get:181 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-utf8 s390x 1.1.4-2 [131 kB] Get:182 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-vctrs s390x 0.3.6-1 [1072 kB] Get:183 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-pillar all 1.4.7-1 [225 kB] Get:184 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] Get:185 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-tibble s390x 3.0.4-1 [422 kB] Get:186 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] Get:187 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-waldo all 0.2.3-2 [79.4 kB] Get:188 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x r-cran-testthat s390x 3.0.0-1 [1423 kB] Get:189 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-isoband s390x 0.2.3-2 [1930 kB] Get:190 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-mass s390x 7.3-53-1 [1108 kB] Get:191 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-lattice s390x 0.20-41-1build1 [1119 kB] Get:192 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-nlme s390x 3.1.151-1 [2229 kB] Get:193 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x r-cran-matrix s390x 1.3-2-1 [3540 kB] Get:194 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-mgcv s390x 1.8-33-1 [2927 kB] Get:195 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-farver s390x 2.0.3-1build2 [1324 kB] Get:196 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-labeling all 0.4.2-1 [62.6 kB] Get:197 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-colorspace s390x 2.0-0+dfsg-1 [1535 kB] Get:198 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-munsell all 0.5.0-2build1 [208 kB] Get:199 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-rcolorbrewer all 1.1-2-3 [54.6 kB] Get:200 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-viridislite all 0.3.0-4 [58.9 kB] Get:201 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-scales all 1.1.1-1build1 [486 kB] Get:202 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-ggplot2 all 3.3.2+dfsg-2 [3124 kB] Get:203 http://ftpmaster.internal/ubuntu hirsute/universe s390x r-cran-gridbase all 0.4-7-5build1 [163 kB] Get:204 http://ftpmaster.internal/ubuntu hirsute-proposed/universe s390x libvcflib-tools s390x 1.0.1+dfsg-4 [659 kB] Get:205 http://ftpmaster.internal/ubuntu hirsute/main s390x pkg-config s390x 0.29.2-1ubuntu1 [45.0 kB] Get:206 http://ftpmaster.internal/ubuntu hirsute/universe s390x samtools s390x 1.11-1 [523 kB] Get:207 http://ftpmaster.internal/ubuntu hirsute/main s390x sysstat s390x 12.4.2-1 [473 kB] Get:208 http://ftpmaster.internal/ubuntu hirsute/universe s390x parallel all 20161222-1.1 [260 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 109 MB in 10s (11.4 MB/s) Selecting previously unselected package libpython3.9-minimal:s390x. (Reading database ... 14763 files and directories currently installed.) Preparing to unpack .../libpython3.9-minimal_3.9.1-2_s390x.deb ... Unpacking libpython3.9-minimal:s390x (3.9.1-2) ... Selecting previously unselected package libexpat1:s390x. Preparing to unpack .../libexpat1_2.2.10-1_s390x.deb ... Unpacking libexpat1:s390x (2.2.10-1) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../python3.9-minimal_3.9.1-2_s390x.deb ... Unpacking python3.9-minimal (3.9.1-2) ... Setting up libpython3.9-minimal:s390x (3.9.1-2) ... Setting up libexpat1:s390x (2.2.10-1) ... Setting up python3.9-minimal (3.9.1-2) ... Selecting previously unselected package python3-minimal. (Reading database ... 15056 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.1-1_s390x.deb ... Unpacking python3-minimal (3.9.1-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_3.0.0_all.deb ... Unpacking media-types (3.0.0) ... Selecting previously unselected package mailcap. Preparing to unpack .../2-mailcap_3.68ubuntu1_all.deb ... Unpacking mailcap (3.68ubuntu1) ... Selecting previously unselected package mime-support. Preparing to unpack .../3-mime-support_3.66_all.deb ... Unpacking mime-support (3.66) ... Selecting previously unselected package libpython3.9-stdlib:s390x. Preparing to unpack .../4-libpython3.9-stdlib_3.9.1-2_s390x.deb ... Unpacking libpython3.9-stdlib:s390x (3.9.1-2) ... Selecting previously unselected package python3.9. Preparing to unpack .../5-python3.9_3.9.1-2_s390x.deb ... Unpacking python3.9 (3.9.1-2) ... Selecting previously unselected package libpython3-stdlib:s390x. Preparing to unpack .../6-libpython3-stdlib_3.9.1-1_s390x.deb ... Unpacking libpython3-stdlib:s390x (3.9.1-1) ... Setting up python3-minimal (3.9.1-1) ... Selecting previously unselected package python3. (Reading database ... 15470 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.1-1_s390x.deb ... Unpacking python3 (3.9.1-1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../001-bsdextrautils_2.36.1-1ubuntu2_s390x.deb ... Unpacking bsdextrautils (2.36.1-1ubuntu2) ... Selecting previously unselected package libuchardet0:s390x. Preparing to unpack .../002-libuchardet0_0.0.7-1_s390x.deb ... Unpacking libuchardet0:s390x (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-5_s390x.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:s390x. Preparing to unpack .../004-libpipeline1_1.5.3-1_s390x.deb ... Unpacking libpipeline1:s390x (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.3-2_s390x.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.39-3_s390x.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:s390x. Preparing to unpack .../007-libmagic1_1%3a5.39-3_s390x.deb ... Unpacking libmagic1:s390x (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../008-file_1%3a5.39-3_s390x.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package libbsd0:s390x. Preparing to unpack .../009-libbsd0_0.10.0-1_s390x.deb ... Unpacking libbsd0:s390x (0.10.0-1) ... Selecting previously unselected package libelf1:s390x. Preparing to unpack .../010-libelf1_0.182-3_s390x.deb ... Unpacking libelf1:s390x (0.182-3) ... Selecting previously unselected package libfribidi0:s390x. Preparing to unpack .../011-libfribidi0_1.0.8-2_s390x.deb ... Unpacking libfribidi0:s390x (1.0.8-2) ... Selecting previously unselected package libglib2.0-0:s390x. Preparing to unpack .../012-libglib2.0-0_2.66.4-1_s390x.deb ... Unpacking libglib2.0-0:s390x (2.66.4-1) ... Selecting previously unselected package libicu67:s390x. Preparing to unpack .../013-libicu67_67.1-5_s390x.deb ... Unpacking libicu67:s390x (67.1-5) ... Selecting previously unselected package libxml2:s390x. Preparing to unpack .../014-libxml2_2.9.10+dfsg-6.3build1_s390x.deb ... Unpacking libxml2:s390x (2.9.10+dfsg-6.3build1) ... Selecting previously unselected package ucf. Preparing to unpack .../015-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package gettext-base. Preparing to unpack .../016-gettext-base_0.21-3ubuntu1_s390x.deb ... Unpacking gettext-base (0.21-3ubuntu1) ... Selecting previously unselected package libpsl5:s390x. Preparing to unpack .../017-libpsl5_0.21.0-1.1ubuntu1_s390x.deb ... Unpacking libpsl5:s390x (0.21.0-1.1ubuntu1) ... Selecting previously unselected package libuv1:s390x. Preparing to unpack .../018-libuv1_1.40.0-1_s390x.deb ... Unpacking libuv1:s390x (1.40.0-1) ... Selecting previously unselected package libxau6:s390x. Preparing to unpack .../019-libxau6_1%3a1.0.9-0ubuntu1_s390x.deb ... Unpacking libxau6:s390x (1:1.0.9-0ubuntu1) ... Selecting previously unselected package libxdmcp6:s390x. Preparing to unpack .../020-libxdmcp6_1%3a1.1.3-0ubuntu1_s390x.deb ... Unpacking libxdmcp6:s390x (1:1.1.3-0ubuntu1) ... Selecting previously unselected package libxcb1:s390x. Preparing to unpack .../021-libxcb1_1.14-2.1_s390x.deb ... Unpacking libxcb1:s390x (1.14-2.1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../022-libx11-data_2%3a1.7.0-2_all.deb ... Unpacking libx11-data (2:1.7.0-2) ... Selecting previously unselected package libx11-6:s390x. Preparing to unpack .../023-libx11-6_2%3a1.7.0-2_s390x.deb ... Unpacking libx11-6:s390x (2:1.7.0-2) ... Selecting previously unselected package libxext6:s390x. Preparing to unpack .../024-libxext6_2%3a1.3.4-0ubuntu1_s390x.deb ... Unpacking libxext6:s390x (2:1.3.4-0ubuntu1) ... Selecting previously unselected package libsigsegv2:s390x. Preparing to unpack .../025-libsigsegv2_2.12-3_s390x.deb ... Unpacking libsigsegv2:s390x (2.12-3) ... Selecting previously unselected package m4. Preparing to unpack .../026-m4_1.4.18-5_s390x.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../027-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../028-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../029-automake_1%3a1.16.3-2ubuntu1_all.deb ... Unpacking automake (1:1.16.3-2ubuntu1) ... Selecting previously unselected package autopoint. Preparing to unpack .../030-autopoint_0.21-3ubuntu1_all.deb ... Unpacking autopoint (0.21-3ubuntu1) ... Selecting previously unselected package bc. Preparing to unpack .../031-bc_1.07.1-2build2_s390x.deb ... Unpacking bc (1.07.1-2build2) ... Selecting previously unselected package cmake-data. Preparing to unpack .../032-cmake-data_3.18.4-1ubuntu3_all.deb ... Unpacking cmake-data (3.18.4-1ubuntu3) ... Selecting previously unselected package libarchive13:s390x. Preparing to unpack .../033-libarchive13_3.4.3-2_s390x.deb ... Unpacking libarchive13:s390x (3.4.3-2) ... Selecting previously unselected package libbrotli1:s390x. Preparing to unpack .../034-libbrotli1_1.0.9-2build2_s390x.deb ... Unpacking libbrotli1:s390x (1.0.9-2build2) ... Selecting previously unselected package libroken18-heimdal:s390x. Preparing to unpack .../035-libroken18-heimdal_7.7.0+dfsg-2_s390x.deb ... Unpacking libroken18-heimdal:s390x (7.7.0+dfsg-2) ... Selecting previously unselected package libasn1-8-heimdal:s390x. Preparing to unpack .../036-libasn1-8-heimdal_7.7.0+dfsg-2_s390x.deb ... Unpacking libasn1-8-heimdal:s390x (7.7.0+dfsg-2) ... Selecting previously unselected package libheimbase1-heimdal:s390x. Preparing to unpack .../037-libheimbase1-heimdal_7.7.0+dfsg-2_s390x.deb ... Unpacking libheimbase1-heimdal:s390x (7.7.0+dfsg-2) ... Selecting previously unselected package libhcrypto4-heimdal:s390x. Preparing to unpack .../038-libhcrypto4-heimdal_7.7.0+dfsg-2_s390x.deb ... Unpacking libhcrypto4-heimdal:s390x (7.7.0+dfsg-2) ... Selecting previously unselected package libwind0-heimdal:s390x. Preparing to unpack .../039-libwind0-heimdal_7.7.0+dfsg-2_s390x.deb ... Unpacking libwind0-heimdal:s390x (7.7.0+dfsg-2) ... Selecting previously unselected package libhx509-5-heimdal:s390x. Preparing to unpack .../040-libhx509-5-heimdal_7.7.0+dfsg-2_s390x.deb ... Unpacking libhx509-5-heimdal:s390x (7.7.0+dfsg-2) ... Selecting previously unselected package libkrb5-26-heimdal:s390x. Preparing to unpack .../041-libkrb5-26-heimdal_7.7.0+dfsg-2_s390x.deb ... Unpacking libkrb5-26-heimdal:s390x (7.7.0+dfsg-2) ... Selecting previously unselected package libheimntlm0-heimdal:s390x. Preparing to unpack .../042-libheimntlm0-heimdal_7.7.0+dfsg-2_s390x.deb ... Unpacking libheimntlm0-heimdal:s390x (7.7.0+dfsg-2) ... Selecting previously unselected package libgssapi3-heimdal:s390x. Preparing to unpack .../043-libgssapi3-heimdal_7.7.0+dfsg-2_s390x.deb ... Unpacking libgssapi3-heimdal:s390x (7.7.0+dfsg-2) ... Selecting previously unselected package libsasl2-modules-db:s390x. Preparing to unpack .../044-libsasl2-modules-db_2.1.27+dfsg-2ubuntu1_s390x.deb ... Unpacking libsasl2-modules-db:s390x (2.1.27+dfsg-2ubuntu1) ... Selecting previously unselected package libsasl2-2:s390x. Preparing to unpack .../045-libsasl2-2_2.1.27+dfsg-2ubuntu1_s390x.deb ... Unpacking libsasl2-2:s390x (2.1.27+dfsg-2ubuntu1) ... Selecting previously unselected package libldap-2.4-2:s390x. Preparing to unpack .../046-libldap-2.4-2_2.4.56+dfsg-1ubuntu1_s390x.deb ... Unpacking libldap-2.4-2:s390x (2.4.56+dfsg-1ubuntu1) ... Selecting previously unselected package libnghttp2-14:s390x. Preparing to unpack .../047-libnghttp2-14_1.42.0-1_s390x.deb ... Unpacking libnghttp2-14:s390x (1.42.0-1) ... Selecting previously unselected package librtmp1:s390x. Preparing to unpack .../048-librtmp1_2.4+20151223.gitfa8646d.1-2build2_s390x.deb ... Unpacking librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build2) ... Selecting previously unselected package libssh-4:s390x. Preparing to unpack .../049-libssh-4_0.9.5-1_s390x.deb ... Unpacking libssh-4:s390x (0.9.5-1) ... Selecting previously unselected package libcurl4:s390x. Preparing to unpack .../050-libcurl4_7.74.0-1ubuntu1_s390x.deb ... Unpacking libcurl4:s390x (7.74.0-1ubuntu1) ... Selecting previously unselected package libjsoncpp24:s390x. Preparing to unpack .../051-libjsoncpp24_1.9.4-4_s390x.deb ... Unpacking libjsoncpp24:s390x (1.9.4-4) ... Selecting previously unselected package librhash0:s390x. Preparing to unpack .../052-librhash0_1.4.1-1_s390x.deb ... Unpacking librhash0:s390x (1.4.1-1) ... Selecting previously unselected package cmake. Preparing to unpack .../053-cmake_3.18.4-1ubuntu3_s390x.deb ... Unpacking cmake (3.18.4-1ubuntu3) ... Selecting previously unselected package libtool. Preparing to unpack .../054-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../055-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../056-libdebhelper-perl_13.3.1ubuntu1_all.deb ... Unpacking libdebhelper-perl (13.3.1ubuntu1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../057-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../058-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../059-libfile-stripnondeterminism-perl_1.9.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.9.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../060-dh-strip-nondeterminism_1.9.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.9.0-1) ... Selecting previously unselected package dwz. Preparing to unpack .../061-dwz_0.13+20201015-2_s390x.deb ... Unpacking dwz (0.13+20201015-2) ... Selecting previously unselected package gettext. Preparing to unpack .../062-gettext_0.21-3ubuntu1_s390x.deb ... Unpacking gettext (0.21-3ubuntu1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../063-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../064-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../065-debhelper_13.3.1ubuntu1_all.deb ... Unpacking debhelper (13.3.1ubuntu1) ... Selecting previously unselected package libfreetype6:s390x. Preparing to unpack .../066-libfreetype6_2.10.4+dfsg-1_s390x.deb ... Unpacking libfreetype6:s390x (2.10.4+dfsg-1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../067-fonts-dejavu-core_2.37-2_all.deb ... Unpacking fonts-dejavu-core (2.37-2) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../068-fontconfig-config_2.13.1-4.2ubuntu2_all.deb ... Unpacking fontconfig-config (2.13.1-4.2ubuntu2) ... Selecting previously unselected package libfontconfig1:s390x. Preparing to unpack .../069-libfontconfig1_2.13.1-4.2ubuntu2_s390x.deb ... Unpacking libfontconfig1:s390x (2.13.1-4.2ubuntu2) ... Selecting previously unselected package fontconfig. Preparing to unpack .../070-fontconfig_2.13.1-4.2ubuntu2_s390x.deb ... Unpacking fontconfig (2.13.1-4.2ubuntu2) ... Selecting previously unselected package libbamtools2.5.1:s390x. Preparing to unpack .../071-libbamtools2.5.1_2.5.1+dfsg-7build1_s390x.deb ... Unpacking libbamtools2.5.1:s390x (2.5.1+dfsg-7build1) ... Selecting previously unselected package libbamtools-dev:s390x. Preparing to unpack .../072-libbamtools-dev_2.5.1+dfsg-7build1_s390x.deb ... Unpacking libbamtools-dev:s390x (2.5.1+dfsg-7build1) ... Selecting previously unselected package libblas3:s390x. Preparing to unpack .../073-libblas3_3.9.0-3ubuntu1_s390x.deb ... Unpacking libblas3:s390x (3.9.0-3ubuntu1) ... Selecting previously unselected package libbwa-dev. Preparing to unpack .../074-libbwa-dev_0.7.17-5_s390x.deb ... Unpacking libbwa-dev (0.7.17-5) ... Selecting previously unselected package libpixman-1-0:s390x. Preparing to unpack .../075-libpixman-1-0_0.40.0-1_s390x.deb ... Unpacking libpixman-1-0:s390x (0.40.0-1) ... Selecting previously unselected package libxcb-render0:s390x. Preparing to unpack .../076-libxcb-render0_1.14-2.1_s390x.deb ... Unpacking libxcb-render0:s390x (1.14-2.1) ... Selecting previously unselected package libxcb-shm0:s390x. Preparing to unpack .../077-libxcb-shm0_1.14-2.1_s390x.deb ... Unpacking libxcb-shm0:s390x (1.14-2.1) ... Selecting previously unselected package libxrender1:s390x. Preparing to unpack .../078-libxrender1_1%3a0.9.10-1_s390x.deb ... Unpacking libxrender1:s390x (1:0.9.10-1) ... Selecting previously unselected package libcairo2:s390x. Preparing to unpack .../079-libcairo2_1.16.0-5_s390x.deb ... Unpacking libcairo2:s390x (1.16.0-5) ... Selecting previously unselected package libcurl3-gnutls:s390x. Preparing to unpack .../080-libcurl3-gnutls_7.74.0-1ubuntu1_s390x.deb ... Unpacking libcurl3-gnutls:s390x (7.74.0-1ubuntu1) ... Selecting previously unselected package libcurl4-gnutls-dev:s390x. Preparing to unpack .../081-libcurl4-gnutls-dev_7.74.0-1ubuntu1_s390x.deb ... Unpacking libcurl4-gnutls-dev:s390x (7.74.0-1ubuntu1) ... Selecting previously unselected package libdatrie1:s390x. Preparing to unpack .../082-libdatrie1_0.2.12-3_s390x.deb ... Unpacking libdatrie1:s390x (0.2.12-3) ... Selecting previously unselected package libdeflate0:s390x. Preparing to unpack .../083-libdeflate0_1.7-1_s390x.deb ... Unpacking libdeflate0:s390x (1.7-1) ... Selecting previously unselected package libdeflate-dev:s390x. Preparing to unpack .../084-libdeflate-dev_1.7-1_s390x.deb ... Unpacking libdeflate-dev:s390x (1.7-1) ... Selecting previously unselected package libdisorder0:s390x. Preparing to unpack .../085-libdisorder0_0.0.2+git20130809.8062ee1-2_s390x.deb ... Unpacking libdisorder0:s390x (0.0.2+git20130809.8062ee1-2) ... Selecting previously unselected package libdisorder-dev:s390x. Preparing to unpack .../086-libdisorder-dev_0.0.2+git20130809.8062ee1-2_s390x.deb ... Unpacking libdisorder-dev:s390x (0.0.2+git20130809.8062ee1-2) ... Selecting previously unselected package libfastahack0. Preparing to unpack .../087-libfastahack0_1.0.0+dfsg-7_s390x.deb ... Unpacking libfastahack0 (1.0.0+dfsg-7) ... Selecting previously unselected package libfastahack-dev. Preparing to unpack .../088-libfastahack-dev_1.0.0+dfsg-7_s390x.deb ... Unpacking libfastahack-dev (1.0.0+dfsg-7) ... Selecting previously unselected package libfml0:s390x. Preparing to unpack .../089-libfml0_0.1+git20190320.b499514-1_s390x.deb ... Unpacking libfml0:s390x (0.1+git20190320.b499514-1) ... Selecting previously unselected package zlib1g-dev:s390x. Preparing to unpack .../090-zlib1g-dev_1%3a1.2.11.dfsg-2ubuntu4_s390x.deb ... Unpacking zlib1g-dev:s390x (1:1.2.11.dfsg-2ubuntu4) ... Selecting previously unselected package libfml-dev:s390x. Preparing to unpack .../091-libfml-dev_0.1+git20190320.b499514-1_s390x.deb ... Unpacking libfml-dev:s390x (0.1+git20190320.b499514-1) ... Selecting previously unselected package libgfortran5:s390x. Preparing to unpack .../092-libgfortran5_10.2.1-6ubuntu1_s390x.deb ... Unpacking libgfortran5:s390x (10.2.1-6ubuntu1) ... Selecting previously unselected package libgraphite2-3:s390x. Preparing to unpack .../093-libgraphite2-3_1.3.14-1_s390x.deb ... Unpacking libgraphite2-3:s390x (1.3.14-1) ... Selecting previously unselected package libharfbuzz0b:s390x. Preparing to unpack .../094-libharfbuzz0b_2.6.7-1ubuntu1_s390x.deb ... Unpacking libharfbuzz0b:s390x (2.6.7-1ubuntu1) ... Selecting previously unselected package libhts3:s390x. Preparing to unpack .../095-libhts3_1.11-4_s390x.deb ... Unpacking libhts3:s390x (1.11-4) ... Selecting previously unselected package liblzma-dev:s390x. Preparing to unpack .../096-liblzma-dev_5.2.4-1ubuntu1_s390x.deb ... Unpacking liblzma-dev:s390x (5.2.4-1ubuntu1) ... Selecting previously unselected package libhts-dev:s390x. Preparing to unpack .../097-libhts-dev_1.11-4_s390x.deb ... Unpacking libhts-dev:s390x (1.11-4) ... Selecting previously unselected package x11-common. Preparing to unpack .../098-x11-common_1%3a7.7+19ubuntu15_all.deb ... dpkg-query: no packages found matching nux-tools Unpacking x11-common (1:7.7+19ubuntu15) ... Selecting previously unselected package libice6:s390x. Preparing to unpack .../099-libice6_2%3a1.0.10-1_s390x.deb ... Unpacking libice6:s390x (2:1.0.10-1) ... Selecting previously unselected package libjpeg-turbo8:s390x. Preparing to unpack .../100-libjpeg-turbo8_2.0.3-0ubuntu2_s390x.deb ... Unpacking libjpeg-turbo8:s390x (2.0.3-0ubuntu2) ... Selecting previously unselected package libjpeg8:s390x. Preparing to unpack .../101-libjpeg8_8c-2ubuntu8_s390x.deb ... Unpacking libjpeg8:s390x (8c-2ubuntu8) ... Selecting previously unselected package liblapack3:s390x. Preparing to unpack .../102-liblapack3_3.9.0-3ubuntu1_s390x.deb ... Unpacking liblapack3:s390x (3.9.0-3ubuntu1) ... Selecting previously unselected package libthai-data. Preparing to unpack .../103-libthai-data_0.1.28-3_all.deb ... Unpacking libthai-data (0.1.28-3) ... Selecting previously unselected package libthai0:s390x. Preparing to unpack .../104-libthai0_0.1.28-3_s390x.deb ... Unpacking libthai0:s390x (0.1.28-3) ... Selecting previously unselected package libpango-1.0-0:s390x. Preparing to unpack .../105-libpango-1.0-0_1.46.2-3_s390x.deb ... Unpacking libpango-1.0-0:s390x (1.46.2-3) ... Selecting previously unselected package libpangoft2-1.0-0:s390x. Preparing to unpack .../106-libpangoft2-1.0-0_1.46.2-3_s390x.deb ... Unpacking libpangoft2-1.0-0:s390x (1.46.2-3) ... Selecting previously unselected package libpangocairo-1.0-0:s390x. Preparing to unpack .../107-libpangocairo-1.0-0_1.46.2-3_s390x.deb ... Unpacking libpangocairo-1.0-0:s390x (1.46.2-3) ... Selecting previously unselected package libpaper1:s390x. Preparing to unpack .../108-libpaper1_1.1.28_s390x.deb ... Unpacking libpaper1:s390x (1.1.28) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../109-libpaper-utils_1.1.28_s390x.deb ... Unpacking libpaper-utils (1.1.28) ... Selecting previously unselected package libsensors-config. Preparing to unpack .../110-libsensors-config_1%3a3.6.0-2ubuntu1_all.deb ... Unpacking libsensors-config (1:3.6.0-2ubuntu1) ... Selecting previously unselected package libsensors5:s390x. Preparing to unpack .../111-libsensors5_1%3a3.6.0-2ubuntu1_s390x.deb ... Unpacking libsensors5:s390x (1:3.6.0-2ubuntu1) ... Selecting previously unselected package libssw0:s390x. Preparing to unpack .../112-libssw0_1.1-12_s390x.deb ... Unpacking libssw0:s390x (1.1-12) ... Selecting previously unselected package libseqlib1:s390x. Preparing to unpack .../113-libseqlib1_1.1.2+dfsg-9ubuntu3_s390x.deb ... Unpacking libseqlib1:s390x (1.1.2+dfsg-9ubuntu3) ... Selecting previously unselected package libjsoncpp-dev:s390x. Preparing to unpack .../114-libjsoncpp-dev_1.9.4-4_s390x.deb ... Unpacking libjsoncpp-dev:s390x (1.9.4-4) ... Selecting previously unselected package libssw-dev:s390x. Preparing to unpack .../115-libssw-dev_1.1-12_s390x.deb ... Unpacking libssw-dev:s390x (1.1-12) ... Selecting previously unselected package libseqlib-dev:s390x. Preparing to unpack .../116-libseqlib-dev_1.1.2+dfsg-9ubuntu3_s390x.deb ... Unpacking libseqlib-dev:s390x (1.1.2+dfsg-9ubuntu3) ... Selecting previously unselected package libsm6:s390x. Preparing to unpack .../117-libsm6_2%3a1.2.3-1_s390x.deb ... Unpacking libsm6:s390x (2:1.2.3-1) ... Selecting previously unselected package libsmithwaterman0. Preparing to unpack .../118-libsmithwaterman0_0.0+git20160702.2610e25-11_s390x.deb ... Unpacking libsmithwaterman0 (0.0+git20160702.2610e25-11) ... Selecting previously unselected package libsmithwaterman-dev. Preparing to unpack .../119-libsmithwaterman-dev_0.0+git20160702.2610e25-11_s390x.deb ... Unpacking libsmithwaterman-dev (0.0+git20160702.2610e25-11) ... Selecting previously unselected package libtabixpp0:s390x. Preparing to unpack .../120-libtabixpp0_1.1.0-3_s390x.deb ... Unpacking libtabixpp0:s390x (1.1.0-3) ... Selecting previously unselected package libtabixpp-dev:s390x. Preparing to unpack .../121-libtabixpp-dev_1.1.0-3_s390x.deb ... Unpacking libtabixpp-dev:s390x (1.1.0-3) ... Selecting previously unselected package libtcl8.6:s390x. Preparing to unpack .../122-libtcl8.6_8.6.11+dfsg-1_s390x.deb ... Unpacking libtcl8.6:s390x (8.6.11+dfsg-1) ... Selecting previously unselected package libjbig0:s390x. Preparing to unpack .../123-libjbig0_2.1-3.1build1_s390x.deb ... Unpacking libjbig0:s390x (2.1-3.1build1) ... Selecting previously unselected package libwebp6:s390x. Preparing to unpack .../124-libwebp6_0.6.1-2_s390x.deb ... Unpacking libwebp6:s390x (0.6.1-2) ... Selecting previously unselected package libtiff5:s390x. Preparing to unpack .../125-libtiff5_4.2.0-1_s390x.deb ... Unpacking libtiff5:s390x (4.2.0-1) ... Selecting previously unselected package libxft2:s390x. Preparing to unpack .../126-libxft2_2.3.3-0ubuntu1_s390x.deb ... Unpacking libxft2:s390x (2.3.3-0ubuntu1) ... Selecting previously unselected package libxss1:s390x. Preparing to unpack .../127-libxss1_1%3a1.2.3-1_s390x.deb ... Unpacking libxss1:s390x (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:s390x. Preparing to unpack .../128-libtk8.6_8.6.11-1_s390x.deb ... Unpacking libtk8.6:s390x (8.6.11-1) ... Selecting previously unselected package libvcflib1:s390x. Preparing to unpack .../129-libvcflib1_1.0.1+dfsg-4_s390x.deb ... Unpacking libvcflib1:s390x (1.0.1+dfsg-4) ... Selecting previously unselected package libvcflib-dev:s390x. Preparing to unpack .../130-libvcflib-dev_1.0.1+dfsg-4_s390x.deb ... Unpacking libvcflib-dev:s390x (1.0.1+dfsg-4) ... Selecting previously unselected package zip. Preparing to unpack .../131-zip_3.0-11build1_s390x.deb ... Unpacking zip (3.0-11build1) ... Selecting previously unselected package unzip. Preparing to unpack .../132-unzip_6.0-25ubuntu1_s390x.deb ... Unpacking unzip (6.0-25ubuntu1) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../133-xdg-utils_1.1.3-2ubuntu2_all.deb ... Unpacking xdg-utils (1.1.3-2ubuntu2) ... Selecting previously unselected package libxt6:s390x. Preparing to unpack .../134-libxt6_1%3a1.2.0-1_s390x.deb ... Unpacking libxt6:s390x (1:1.2.0-1) ... Selecting previously unselected package r-base-core. Preparing to unpack .../135-r-base-core_4.0.3-1_s390x.deb ... Unpacking r-base-core (4.0.3-1) ... Selecting previously unselected package r-cran-littler. Preparing to unpack .../136-r-cran-littler_0.3.12-1_s390x.deb ... Unpacking r-cran-littler (0.3.12-1) ... Selecting previously unselected package littler. Preparing to unpack .../137-littler_0.3.12-1_all.deb ... Unpacking littler (0.3.12-1) ... Selecting previously unselected package r-cran-pkgkitten. Preparing to unpack .../138-r-cran-pkgkitten_0.2.0-1_all.deb ... Unpacking r-cran-pkgkitten (0.2.0-1) ... Selecting previously unselected package r-cran-rcpp. Preparing to unpack .../139-r-cran-rcpp_1.0.6-1_s390x.deb ... Unpacking r-cran-rcpp (1.0.6-1) ... Selecting previously unselected package r-cran-plyr. Preparing to unpack .../140-r-cran-plyr_1.8.6-2build1_s390x.deb ... Unpacking r-cran-plyr (1.8.6-2build1) ... Selecting previously unselected package r-cran-digest. Preparing to unpack .../141-r-cran-digest_0.6.27-1_s390x.deb ... Unpacking r-cran-digest (0.6.27-1) ... Selecting previously unselected package r-cran-glue. Preparing to unpack .../142-r-cran-glue_1.4.2-1_s390x.deb ... Unpacking r-cran-glue (1.4.2-1) ... Selecting previously unselected package r-cran-gtable. Preparing to unpack .../143-r-cran-gtable_0.3.0+dfsg-2build1_all.deb ... Unpacking r-cran-gtable (0.3.0+dfsg-2build1) ... Selecting previously unselected package r-cran-brio. Preparing to unpack .../144-r-cran-brio_1.1.0-2_s390x.deb ... Unpacking r-cran-brio (1.1.0-2) ... Selecting previously unselected package r-cran-ps. Preparing to unpack .../145-r-cran-ps_1.4.0-1_s390x.deb ... Unpacking r-cran-ps (1.4.0-1) ... Selecting previously unselected package r-cran-r6. Preparing to unpack .../146-r-cran-r6_2.5.0-1_all.deb ... Unpacking r-cran-r6 (2.5.0-1) ... Selecting previously unselected package r-cran-processx. Preparing to unpack .../147-r-cran-processx_3.4.5-1_s390x.deb ... Unpacking r-cran-processx (3.4.5-1) ... Selecting previously unselected package r-cran-callr. Preparing to unpack .../148-r-cran-callr_3.5.1-1_all.deb ... Unpacking r-cran-callr (3.5.1-1) ... Selecting previously unselected package r-cran-assertthat. Preparing to unpack .../149-r-cran-assertthat_0.2.1-2build1_all.deb ... Unpacking r-cran-assertthat (0.2.1-2build1) ... Selecting previously unselected package r-cran-crayon. Preparing to unpack .../150-r-cran-crayon_1.3.4-5_all.deb ... Unpacking r-cran-crayon (1.3.4-5) ... Selecting previously unselected package r-cran-fansi. Preparing to unpack .../151-r-cran-fansi_0.4.1-1build1_s390x.deb ... Unpacking r-cran-fansi (0.4.1-1build1) ... Selecting previously unselected package r-cran-cli. Preparing to unpack .../152-r-cran-cli_2.2.0-1_all.deb ... Unpacking r-cran-cli (2.2.0-1) ... Selecting previously unselected package r-cran-backports. Preparing to unpack .../153-r-cran-backports_1.2.1-1_s390x.deb ... Unpacking r-cran-backports (1.2.1-1) ... Selecting previously unselected package r-cran-rprojroot. Preparing to unpack .../154-r-cran-rprojroot_1.3-2-3build1_all.deb ... Unpacking r-cran-rprojroot (1.3-2-3build1) ... Selecting previously unselected package r-cran-desc. Preparing to unpack .../155-r-cran-desc_1.2.0-3build1_all.deb ... Unpacking r-cran-desc (1.2.0-3build1) ... Selecting previously unselected package r-cran-rlang. Preparing to unpack .../156-r-cran-rlang_0.4.8-1_s390x.deb ... Unpacking r-cran-rlang (0.4.8-1) ... Selecting previously unselected package r-cran-ellipsis. Preparing to unpack .../157-r-cran-ellipsis_0.3.1-1build1_s390x.deb ... Unpacking r-cran-ellipsis (0.3.1-1build1) ... Selecting previously unselected package r-cran-evaluate. Preparing to unpack .../158-r-cran-evaluate_0.14-2build1_all.deb ... Unpacking r-cran-evaluate (0.14-2build1) ... Selecting previously unselected package r-cran-jsonlite. Preparing to unpack .../159-r-cran-jsonlite_1.7.2+dfsg-1_s390x.deb ... Unpacking r-cran-jsonlite (1.7.2+dfsg-1) ... Selecting previously unselected package r-cran-lifecycle. Preparing to unpack .../160-r-cran-lifecycle_0.2.0-2build1_all.deb ... Unpacking r-cran-lifecycle (0.2.0-2build1) ... Selecting previously unselected package r-cran-magrittr. Preparing to unpack .../161-r-cran-magrittr_2.0.1-1_s390x.deb ... Unpacking r-cran-magrittr (2.0.1-1) ... Selecting previously unselected package r-cran-prettyunits. Preparing to unpack .../162-r-cran-prettyunits_1.1.1-2build1_all.deb ... Unpacking r-cran-prettyunits (1.1.1-2build1) ... Selecting previously unselected package r-cran-withr. Preparing to unpack .../163-r-cran-withr_2.3.0-1_all.deb ... Unpacking r-cran-withr (2.3.0-1) ... Selecting previously unselected package r-cran-pkgbuild. Preparing to unpack .../164-r-cran-pkgbuild_1.1.0-1_all.deb ... Unpacking r-cran-pkgbuild (1.1.0-1) ... Selecting previously unselected package r-cran-rstudioapi. Preparing to unpack .../165-r-cran-rstudioapi_0.13-1_all.deb ... Unpacking r-cran-rstudioapi (0.13-1) ... Selecting previously unselected package r-cran-pkgload. Preparing to unpack .../166-r-cran-pkgload_1.1.0-1_s390x.deb ... Unpacking r-cran-pkgload (1.1.0-1) ... Selecting previously unselected package r-cran-praise. Preparing to unpack .../167-r-cran-praise_1.0.0-4build1_all.deb ... Unpacking r-cran-praise (1.0.0-4build1) ... Selecting previously unselected package r-cran-diffobj. Preparing to unpack .../168-r-cran-diffobj_0.3.2-1_s390x.deb ... Unpacking r-cran-diffobj (0.3.2-1) ... Selecting previously unselected package r-cran-utf8. Preparing to unpack .../169-r-cran-utf8_1.1.4-2_s390x.deb ... Unpacking r-cran-utf8 (1.1.4-2) ... Selecting previously unselected package r-cran-vctrs. Preparing to unpack .../170-r-cran-vctrs_0.3.6-1_s390x.deb ... Unpacking r-cran-vctrs (0.3.6-1) ... Selecting previously unselected package r-cran-pillar. Preparing to unpack .../171-r-cran-pillar_1.4.7-1_all.deb ... Unpacking r-cran-pillar (1.4.7-1) ... Selecting previously unselected package r-cran-pkgconfig. Preparing to unpack .../172-r-cran-pkgconfig_2.0.3-2build1_all.deb ... Unpacking r-cran-pkgconfig (2.0.3-2build1) ... Selecting previously unselected package r-cran-tibble. Preparing to unpack .../173-r-cran-tibble_3.0.4-1_s390x.deb ... Unpacking r-cran-tibble (3.0.4-1) ... Selecting previously unselected package r-cran-rematch2. Preparing to unpack .../174-r-cran-rematch2_2.1.2-2build1_all.deb ... Unpacking r-cran-rematch2 (2.1.2-2build1) ... Selecting previously unselected package r-cran-waldo. Preparing to unpack .../175-r-cran-waldo_0.2.3-2_all.deb ... Unpacking r-cran-waldo (0.2.3-2) ... Selecting previously unselected package r-cran-testthat. Preparing to unpack .../176-r-cran-testthat_3.0.0-1_s390x.deb ... Unpacking r-cran-testthat (3.0.0-1) ... Selecting previously unselected package r-cran-isoband. Preparing to unpack .../177-r-cran-isoband_0.2.3-2_s390x.deb ... Unpacking r-cran-isoband (0.2.3-2) ... Selecting previously unselected package r-cran-mass. Preparing to unpack .../178-r-cran-mass_7.3-53-1_s390x.deb ... Unpacking r-cran-mass (7.3-53-1) ... Selecting previously unselected package r-cran-lattice. Preparing to unpack .../179-r-cran-lattice_0.20-41-1build1_s390x.deb ... Unpacking r-cran-lattice (0.20-41-1build1) ... Selecting previously unselected package r-cran-nlme. Preparing to unpack .../180-r-cran-nlme_3.1.151-1_s390x.deb ... Unpacking r-cran-nlme (3.1.151-1) ... Selecting previously unselected package r-cran-matrix. Preparing to unpack .../181-r-cran-matrix_1.3-2-1_s390x.deb ... Unpacking r-cran-matrix (1.3-2-1) ... Selecting previously unselected package r-cran-mgcv. Preparing to unpack .../182-r-cran-mgcv_1.8-33-1_s390x.deb ... Unpacking r-cran-mgcv (1.8-33-1) ... Selecting previously unselected package r-cran-farver. Preparing to unpack .../183-r-cran-farver_2.0.3-1build2_s390x.deb ... Unpacking r-cran-farver (2.0.3-1build2) ... Selecting previously unselected package r-cran-labeling. Preparing to unpack .../184-r-cran-labeling_0.4.2-1_all.deb ... Unpacking r-cran-labeling (0.4.2-1) ... Selecting previously unselected package r-cran-colorspace. Preparing to unpack .../185-r-cran-colorspace_2.0-0+dfsg-1_s390x.deb ... Unpacking r-cran-colorspace (2.0-0+dfsg-1) ... Selecting previously unselected package r-cran-munsell. Preparing to unpack .../186-r-cran-munsell_0.5.0-2build1_all.deb ... Unpacking r-cran-munsell (0.5.0-2build1) ... Selecting previously unselected package r-cran-rcolorbrewer. Preparing to unpack .../187-r-cran-rcolorbrewer_1.1-2-3_all.deb ... Unpacking r-cran-rcolorbrewer (1.1-2-3) ... Selecting previously unselected package r-cran-viridislite. Preparing to unpack .../188-r-cran-viridislite_0.3.0-4_all.deb ... Unpacking r-cran-viridislite (0.3.0-4) ... Selecting previously unselected package r-cran-scales. Preparing to unpack .../189-r-cran-scales_1.1.1-1build1_all.deb ... Unpacking r-cran-scales (1.1.1-1build1) ... Selecting previously unselected package r-cran-ggplot2. Preparing to unpack .../190-r-cran-ggplot2_3.3.2+dfsg-2_all.deb ... Unpacking r-cran-ggplot2 (3.3.2+dfsg-2) ... Selecting previously unselected package r-cran-gridbase. Preparing to unpack .../191-r-cran-gridbase_0.4-7-5build1_all.deb ... Unpacking r-cran-gridbase (0.4-7-5build1) ... Selecting previously unselected package libvcflib-tools. Preparing to unpack .../192-libvcflib-tools_1.0.1+dfsg-4_s390x.deb ... Unpacking libvcflib-tools (1.0.1+dfsg-4) ... Selecting previously unselected package pkg-config. Preparing to unpack .../193-pkg-config_0.29.2-1ubuntu1_s390x.deb ... Unpacking pkg-config (0.29.2-1ubuntu1) ... Selecting previously unselected package samtools. Preparing to unpack .../194-samtools_1.11-1_s390x.deb ... Unpacking samtools (1.11-1) ... Selecting previously unselected package sysstat. Preparing to unpack .../195-sysstat_12.4.2-1_s390x.deb ... Unpacking sysstat (12.4.2-1) ... Selecting previously unselected package parallel. Preparing to unpack .../196-parallel_20161222-1.1_all.deb ... Adding 'diversion of /usr/bin/parallel to /usr/bin/parallel.moreutils by parallel' Adding 'diversion of /usr/share/man/man1/parallel.1.gz to /usr/share/man/man1/parallel.moreutils.1.gz by parallel' Unpacking parallel (20161222-1.1) ... Selecting previously unselected package sbuild-build-depends-freebayes-dummy. Preparing to unpack .../197-sbuild-build-depends-freebayes-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-freebayes-dummy (0.invalid.0) ... Setting up media-types (3.0.0) ... Setting up libpipeline1:s390x (1.5.3-1) ... Setting up libgraphite2-3:s390x (1.3.14-1) ... Setting up libdisorder0:s390x (0.0.2+git20130809.8062ee1-2) ... Setting up libpixman-1-0:s390x (0.40.0-1) ... Setting up libxau6:s390x (1:1.0.9-0ubuntu1) ... Setting up libpsl5:s390x (0.21.0-1.1ubuntu1) ... Setting up bsdextrautils (2.36.1-1ubuntu2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:s390x (67.1-5) ... Setting up libdatrie1:s390x (0.2.12-3) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:s390x (2.66.4-1) ... No schema files found: doing nothing. Setting up unzip (6.0-25ubuntu1) ... Setting up libdebhelper-perl (13.3.1ubuntu1) ... Setting up libbrotli1:s390x (1.0.9-2build2) ... Setting up x11-common (1:7.7+19ubuntu15) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libsensors-config (1:3.6.0-2ubuntu1) ... Setting up libsmithwaterman0 (0.0+git20160702.2610e25-11) ... Setting up libnghttp2-14:s390x (1.42.0-1) ... Setting up libmagic1:s390x (1:5.39-3) ... Setting up libdeflate0:s390x (1.7-1) ... Setting up bc (1.07.1-2build2) ... Setting up gettext-base (0.21-3ubuntu1) ... Setting up file (1:5.39-3) ... Setting up libfml0:s390x (0.1+git20190320.b499514-1) ... Setting up libfastahack0 (1.0.0+dfsg-7) ... Setting up libjbig0:s390x (2.1-3.1build1) ... Setting up libsasl2-modules-db:s390x (2.1.27+dfsg-2ubuntu1) ... Setting up libfastahack-dev (1.0.0+dfsg-7) ... Setting up zip (3.0-11build1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:s390x (3.9.0-3ubuntu1) ... update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode Setting up libuv1:s390x (1.40.0-1) ... Setting up libfreetype6:s390x (2.10.4+dfsg-1) ... Setting up libx11-data (2:1.7.0-2) ... Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build2) ... Setting up libsigsegv2:s390x (2.12-3) ... Setting up libfribidi0:s390x (1.0.8-2) ... Setting up libbamtools2.5.1:s390x (2.5.1+dfsg-7build1) ... Setting up libtcl8.6:s390x (8.6.11+dfsg-1) ... Setting up autopoint (0.21-3ubuntu1) ... Setting up libwebp6:s390x (0.6.1-2) ... Setting up pkg-config (0.29.2-1ubuntu1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up ucf (3.0043) ... Setting up libsensors5:s390x (1:3.6.0-2ubuntu1) ... Setting up libdisorder-dev:s390x (0.0.2+git20130809.8062ee1-2) ... Setting up libjpeg-turbo8:s390x (2.0.3-0ubuntu2) ... Setting up libsasl2-2:s390x (2.1.27+dfsg-2ubuntu1) ... Setting up libssh-4:s390x (0.9.5-1) ... Setting up libgfortran5:s390x (10.2.1-6ubuntu1) ... Setting up libroken18-heimdal:s390x (7.7.0+dfsg-2) ... Setting up libbwa-dev (0.7.17-5) ... Setting up libjsoncpp24:s390x (1.9.4-4) ... Setting up liblzma-dev:s390x (5.2.4-1ubuntu1) ... Setting up zlib1g-dev:s390x (1:1.2.11.dfsg-2ubuntu4) ... Setting up librhash0:s390x (1.4.1-1) ... Setting up libuchardet0:s390x (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libharfbuzz0b:s390x (2.6.7-1ubuntu1) ... Setting up libthai-data (0.1.28-3) ... Setting up cmake-data (3.18.4-1ubuntu3) ... Setting up libbsd0:s390x (0.10.0-1) ... Setting up libdeflate-dev:s390x (1.7-1) ... Setting up mailcap (3.68ubuntu1) ... Setting up libelf1:s390x (0.182-3) ... Setting up libssw0:s390x (1.1-12) ... Setting up libxml2:s390x (2.9.10+dfsg-6.3build1) ... Setting up sysstat (12.4.2-1) ... Creating config file /etc/default/sysstat with new version update-alternatives: using /usr/bin/sar.sysstat to provide /usr/bin/sar (sar) in auto mode Created symlink /etc/systemd/system/sysstat.service.wants/sysstat-collect.timer → /lib/systemd/system/sysstat-collect.timer. Created symlink /etc/systemd/system/sysstat.service.wants/sysstat-summary.timer → /lib/systemd/system/sysstat-summary.timer. Created symlink /etc/systemd/system/multi-user.target.wants/sysstat.service → /lib/systemd/system/sysstat.service. Setting up xdg-utils (1.1.3-2ubuntu2) ... Setting up libpython3.9-stdlib:s390x (3.9.1-2) ... Setting up libpython3-stdlib:s390x (3.9.1-1) ... Setting up libheimbase1-heimdal:s390x (7.7.0+dfsg-2) ... Setting up libjpeg8:s390x (8c-2ubuntu8) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libpaper1:s390x (1.1.28) ... Creating config file /etc/papersize with new version Setting up libice6:s390x (2:1.0.10-1) ... Setting up libjsoncpp-dev:s390x (1.9.4-4) ... Setting up libxdmcp6:s390x (1:1.1.3-0ubuntu1) ... Setting up liblapack3:s390x (3.9.0-3ubuntu1) ... update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode Setting up libxcb1:s390x (1.14-2.1) ... Setting up gettext (0.21-3ubuntu1) ... Setting up libfml-dev:s390x (0.1+git20190320.b499514-1) ... Setting up mime-support (3.66) ... Setting up libssw-dev:s390x (1.1-12) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:s390x (3.4.3-2) ... Setting up libxcb-render0:s390x (1.14-2.1) ... Setting up fontconfig-config (2.13.1-4.2ubuntu2) ... Setting up libasn1-8-heimdal:s390x (7.7.0+dfsg-2) ... Setting up m4 (1.4.18-5) ... Setting up libxcb-shm0:s390x (1.14-2.1) ... Setting up libpaper-utils (1.1.28) ... Setting up libhcrypto4-heimdal:s390x (7.7.0+dfsg-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libthai0:s390x (0.1.28-3) ... Setting up libwind0-heimdal:s390x (7.7.0+dfsg-2) ... Setting up libbamtools-dev:s390x (2.5.1+dfsg-7build1) ... Setting up libsmithwaterman-dev (0.0+git20160702.2610e25-11) ... Setting up parallel (20161222-1.1) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up dwz (0.13+20201015-2) ... Setting up groff-base (1.22.4-5) ... Setting up libx11-6:s390x (2:1.7.0-2) ... Setting up libtiff5:s390x (4.2.0-1) ... Setting up libfontconfig1:s390x (2.13.1-4.2ubuntu2) ... Setting up libsm6:s390x (2:1.2.3-1) ... Setting up python3.9 (3.9.1-2) ... Setting up automake (1:1.16.3-2ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up fontconfig (2.13.1-4.2ubuntu2) ... Regenerating fonts cache... done. Setting up libxrender1:s390x (1:0.9.10-1) ... Setting up libhx509-5-heimdal:s390x (7.7.0+dfsg-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpango-1.0-0:s390x (1.46.2-3) ... Setting up libxext6:s390x (2:1.3.4-0ubuntu1) ... Setting up python3 (3.9.1-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libcairo2:s390x (1.16.0-5) ... Setting up libxt6:s390x (1:1.2.0-1) ... Setting up libxss1:s390x (1:1.2.3-1) ... Setting up libpangoft2-1.0-0:s390x (1.46.2-3) ... Setting up libpangocairo-1.0-0:s390x (1.46.2-3) ... Setting up libkrb5-26-heimdal:s390x (7.7.0+dfsg-2) ... Setting up libxft2:s390x (2.3.3-0ubuntu1) ... Setting up libtk8.6:s390x (8.6.11-1) ... Setting up libheimntlm0-heimdal:s390x (7.7.0+dfsg-2) ... Setting up libgssapi3-heimdal:s390x (7.7.0+dfsg-2) ... Setting up libldap-2.4-2:s390x (2.4.56+dfsg-1ubuntu1) ... Setting up libcurl3-gnutls:s390x (7.74.0-1ubuntu1) ... Setting up libcurl4-gnutls-dev:s390x (7.74.0-1ubuntu1) ... Setting up libcurl4:s390x (7.74.0-1ubuntu1) ... Setting up libhts3:s390x (1.11-4) ... Setting up libseqlib1:s390x (1.1.2+dfsg-9ubuntu3) ... Setting up libhts-dev:s390x (1.11-4) ... Setting up libseqlib-dev:s390x (1.1.2+dfsg-9ubuntu3) ... Setting up samtools (1.11-1) ... Setting up r-base-core (4.0.3-1) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.3.4-5) ... Setting up r-cran-gtable (0.3.0+dfsg-2build1) ... Setting up r-cran-labeling (0.4.2-1) ... Setting up r-cran-lattice (0.20-41-1build1) ... Setting up r-cran-ps (1.4.0-1) ... Setting up r-cran-nlme (3.1.151-1) ... Setting up r-cran-farver (2.0.3-1build2) ... Setting up r-cran-viridislite (0.3.0-4) ... Setting up libtabixpp0:s390x (1.1.0-3) ... Setting up cmake (3.18.4-1ubuntu3) ... Setting up r-cran-r6 (2.5.0-1) ... Setting up r-cran-pkgkitten (0.2.0-1) ... Setting up r-cran-magrittr (2.0.1-1) ... Setting up r-cran-littler (0.3.12-1) ... Setting up r-cran-rcpp (1.0.6-1) ... Setting up r-cran-brio (1.1.0-2) ... Setting up r-cran-diffobj (0.3.2-1) ... Setting up r-cran-rlang (0.4.8-1) ... Setting up r-cran-gridbase (0.4-7-5build1) ... Setting up r-cran-assertthat (0.2.1-2build1) ... Setting up littler (0.3.12-1) ... Setting up r-cran-withr (2.3.0-1) ... Setting up r-cran-backports (1.2.1-1) ... Setting up r-cran-processx (3.4.5-1) ... Setting up r-cran-praise (1.0.0-4build1) ... Setting up r-cran-digest (0.6.27-1) ... Setting up r-cran-evaluate (0.14-2build1) ... Setting up r-cran-prettyunits (1.1.1-2build1) ... Setting up r-cran-fansi (0.4.1-1build1) ... Setting up r-cran-mass (7.3-53-1) ... Setting up r-cran-glue (1.4.2-1) ... Setting up r-cran-cli (2.2.0-1) ... Setting up r-cran-lifecycle (0.2.0-2build1) ... Setting up r-cran-rprojroot (1.3-2-3build1) ... Setting up r-cran-jsonlite (1.7.2+dfsg-1) ... Setting up r-cran-rstudioapi (0.13-1) ... Setting up r-cran-pkgconfig (2.0.3-2build1) ... Setting up r-cran-utf8 (1.1.4-2) ... Setting up r-cran-colorspace (2.0-0+dfsg-1) ... Setting up r-cran-plyr (1.8.6-2build1) ... Setting up r-cran-rcolorbrewer (1.1-2-3) ... Setting up r-cran-matrix (1.3-2-1) ... Setting up libvcflib1:s390x (1.0.1+dfsg-4) ... Setting up r-cran-mgcv (1.8-33-1) ... Setting up libtabixpp-dev:s390x (1.1.0-3) ... Setting up libvcflib-dev:s390x (1.0.1+dfsg-4) ... Setting up r-cran-ellipsis (0.3.1-1build1) ... Setting up r-cran-callr (3.5.1-1) ... Setting up r-cran-desc (1.2.0-3build1) ... Setting up r-cran-munsell (0.5.0-2build1) ... Setting up r-cran-scales (1.1.1-1build1) ... Setting up r-cran-pkgbuild (1.1.0-1) ... Setting up r-cran-vctrs (0.3.6-1) ... Setting up r-cran-pillar (1.4.7-1) ... Setting up r-cran-pkgload (1.1.0-1) ... Setting up r-cran-tibble (3.0.4-1) ... Setting up r-cran-rematch2 (2.1.2-2build1) ... Setting up r-cran-waldo (0.2.3-2) ... Setting up r-cran-testthat (3.0.0-1) ... Setting up r-cran-isoband (0.2.3-2) ... Setting up r-cran-ggplot2 (3.3.2+dfsg-2) ... Setting up libvcflib-tools (1.0.1+dfsg-4) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.3.1ubuntu1) ... Setting up sbuild-build-depends-freebayes-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-0ubuntu6) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-130-generic s390x (s390x) Toolchain package versions: binutils_2.35.90.20210113-1ubuntu1 dpkg-dev_1.20.7.1ubuntu1 g++-10_10.2.1-6ubuntu1 gcc-10_10.2.1-6ubuntu1 libc6-dev_2.32-0ubuntu6 libstdc++-10-dev_10.2.1-6ubuntu1 libstdc++6_10.2.1-6ubuntu1 linux-libc-dev_5.10.0-12.13 Package versions: adduser_3.118ubuntu5 advancecomp_2.1-2.1build1 apt_2.1.18 autoconf_2.69-14 automake_1:1.16.3-2ubuntu1 autopoint_0.21-3ubuntu1 autotools-dev_20180224.1+nmu1 base-files_11ubuntu16 base-passwd_3.5.48 bash_5.1-1ubuntu1 bc_1.07.1-2build2 binutils_2.35.90.20210113-1ubuntu1 binutils-common_2.35.90.20210113-1ubuntu1 binutils-s390x-linux-gnu_2.35.90.20210113-1ubuntu1 bsdextrautils_2.36.1-1ubuntu2 bsdutils_1:2.36.1-1ubuntu2 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 cmake_3.18.4-1ubuntu3 cmake-data_3.18.4-1ubuntu3 coreutils_8.32-4ubuntu2 cpp_4:10.2.0-1ubuntu1 cpp-10_10.2.1-6ubuntu1 dash_0.5.11+git20200708+dd9ef66+really0.5.11+git20200708+dd9ef66-5ubuntu1 debconf_1.5.74 debhelper_13.3.1ubuntu1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3ubuntu1 dpkg_1.20.7.1ubuntu1 dpkg-dev_1.20.7.1ubuntu1 dwz_0.13+20201015-2 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.7.0-1ubuntu2 fontconfig_2.13.1-4.2ubuntu2 fontconfig-config_2.13.1-4.2ubuntu2 fonts-dejavu-core_2.37-2 g++_4:10.2.0-1ubuntu1 g++-10_10.2.1-6ubuntu1 gcc_4:10.2.0-1ubuntu1 gcc-10_10.2.1-6ubuntu1 gcc-10-base_10.2.1-6ubuntu1 gettext_0.21-3ubuntu1 gettext-base_0.21-3ubuntu1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hostname_3.23 init_1.60 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-9 libapparmor1_3.0.0-0ubuntu5 libapt-pkg6.0_2.1.18 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libargon2-1_0~20171227-0.2build20.10.0 libasan6_10.2.1-6ubuntu1 libasn1-8-heimdal_7.7.0+dfsg-2 libassuan0_2.5.3-7.1 libatomic1_10.2.1-6ubuntu1 libattr1_1:2.4.48-6 libaudit-common_1:2.8.5-3ubuntu3 libaudit1_1:2.8.5-3ubuntu3 libbamtools-dev_2.5.1+dfsg-7build1 libbamtools2.5.1_2.5.1+dfsg-7build1 libbinutils_2.35.90.20210113-1ubuntu1 libblas3_3.9.0-3ubuntu1 libblkid1_2.36.1-1ubuntu2 libbrotli1_1.0.9-2build2 libbsd0_0.10.0-1 libbwa-dev_0.7.17-5 libbz2-1.0_1.0.8-4ubuntu2 libc-bin_2.32-0ubuntu6 libc-dev-bin_2.32-0ubuntu6 libc6_2.32-0ubuntu6 libc6-dev_2.32-0ubuntu6 libcairo2_1.16.0-5 libcap-ng0_0.7.9-2.2build1 libcap2_1:2.44-1 libcc1-0_10.2.1-6ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcrypt-dev_1:4.4.17-1ubuntu1 libcrypt1_1:4.4.17-1ubuntu1 libcryptsetup12_2:2.3.4-1ubuntu1 libctf-nobfd0_2.35.90.20210113-1ubuntu1 libctf0_2.35.90.20210113-1ubuntu1 libcurl3-gnutls_7.74.0-1ubuntu1 libcurl4_7.74.0-1ubuntu1 libcurl4-gnutls-dev_7.74.0-1ubuntu1 libdatrie1_0.2.12-3 libdb5.3_5.3.28+dfsg1-0.6ubuntu3 libdebconfclient0_0.256ubuntu1 libdebhelper-perl_13.3.1ubuntu1 libdeflate-dev_1.7-1 libdeflate0_1.7-1 libdevmapper1.02.1_2:1.02.167-1ubuntu4 libdisorder-dev_0.0.2+git20130809.8062ee1-2 libdisorder0_0.0.2+git20130809.8062ee1-2 libdpkg-perl_1.20.7.1ubuntu1 libelf1_0.182-3 libexpat1_2.2.10-1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.25.3-1.1 libfastahack-dev_1.0.0+dfsg-7 libfastahack0_1.0.0+dfsg-7 libffi8ubuntu1_3.4~20200819gead65ca871-0ubuntu3 libfile-stripnondeterminism-perl_1.9.0-1 libfml-dev_0.1+git20190320.b499514-1 libfml0_0.1+git20190320.b499514-1 libfontconfig1_2.13.1-4.2ubuntu2 libfreetype6_2.10.4+dfsg-1 libfribidi0_1.0.8-2 libgcc-10-dev_10.2.1-6ubuntu1 libgcc-s1_10.2.1-6ubuntu1 libgcrypt20_1.8.7-2ubuntu1 libgdbm-compat4_1.19-1 libgdbm6_1.19-1 libgfortran5_10.2.1-6ubuntu1 libglib2.0-0_2.66.4-1 libgmp10_2:6.2.0+dfsg-6ubuntu1 libgnutls30_3.7.0-5ubuntu1 libgomp1_10.2.1-6ubuntu1 libgpg-error0_1.38-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.17-10ubuntu1 libgssapi3-heimdal_7.7.0+dfsg-2 libharfbuzz0b_2.6.7-1ubuntu1 libhcrypto4-heimdal_7.7.0+dfsg-2 libheimbase1-heimdal_7.7.0+dfsg-2 libheimntlm0-heimdal_7.7.0+dfsg-2 libhogweed6_3.6-2 libhts-dev_1.11-4 libhts3_1.11-4 libhx509-5-heimdal_7.7.0+dfsg-2 libice6_2:1.0.10-1 libicu67_67.1-5 libidn2-0_2.3.0-5 libip4tc2_1.8.5-3ubuntu4 libisl22_0.22.1-1 libisl23_0.23-1 libitm1_10.2.1-6ubuntu1 libjbig0_2.1-3.1build1 libjpeg-turbo8_2.0.3-0ubuntu2 libjpeg8_8c-2ubuntu8 libjson-c5_0.15-1 libjsoncpp-dev_1.9.4-4 libjsoncpp24_1.9.4-4 libk5crypto3_1.17-10ubuntu1 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27+20200310-2ubuntu1 libkrb5-26-heimdal_7.7.0+dfsg-2 libkrb5-3_1.17-10ubuntu1 libkrb5support0_1.17-10ubuntu1 liblapack3_3.9.0-3ubuntu1 libldap-2.4-2_2.4.56+dfsg-1ubuntu1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblz4-1_1.9.3-0ubuntu1 liblzma-dev_5.2.4-1ubuntu1 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-1ubuntu2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncurses6_6.2+20201114-2 libncursesw6_6.2+20201114-2 libnettle8_3.6-2 libnghttp2-14_1.42.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-0ubuntu3 libnsl2_1.3.0-0ubuntu3 libnss-nis_3.1-0ubuntu4 libnss-nisplus_1.3-0ubuntu4 libp11-kit0_0.23.22-1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libpango-1.0-0_1.46.2-3 libpangocairo-1.0-0_1.46.2-3 libpangoft2-1.0-0_1.46.2-3 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre2-8-0_10.35-2ubuntu1 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libperl5.32_5.32.0-6 libpipeline1_1.5.3-1 libpixman-1-0_0.40.0-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.16-5ubuntu2 libpsl5_0.21.0-1.1ubuntu1 libpython3-stdlib_3.9.1-1 libpython3.9-minimal_3.9.1-2 libpython3.9-stdlib_3.9.1-2 libreadline8_8.1-1 librhash0_1.4.1-1 libroken18-heimdal_7.7.0+dfsg-2 librtmp1_2.4+20151223.gitfa8646d.1-2build2 libsasl2-2_2.1.27+dfsg-2ubuntu1 libsasl2-modules-db_2.1.27+dfsg-2ubuntu1 libseccomp2_2.4.3-1ubuntu6 libselinux1_3.1-2build2 libsemanage-common_3.1-1build2 libsemanage1_3.1-1build2 libsensors-config_1:3.6.0-2ubuntu1 libsensors5_1:3.6.0-2ubuntu1 libsepol1_3.1-1 libseqlib-dev_1.1.2+dfsg-9ubuntu3 libseqlib1_1.1.2+dfsg-9ubuntu3 libsigsegv2_2.12-3 libsm6_2:1.2.3-1 libsmartcols1_2.36.1-1ubuntu2 libsmithwaterman-dev_0.0+git20160702.2610e25-11 libsmithwaterman0_0.0+git20160702.2610e25-11 libsqlite3-0_3.34.0-1 libss2_1.45.6-1ubuntu1 libssh-4_0.9.5-1 libssl1.1_1.1.1f-1ubuntu5 libssw-dev_1.1-12 libssw0_1.1-12 libstdc++-10-dev_10.2.1-6ubuntu1 libstdc++6_10.2.1-6ubuntu1 libsub-override-perl_0.09-2 libsystemd0_247.1-4ubuntu1 libtabixpp-dev_1.1.0-3 libtabixpp0_1.1.0-3 libtasn1-6_4.16.0-2 libtcl8.6_8.6.11+dfsg-1 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.2.0-1 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtk8.6_8.6.11-1 libtool_2.4.6-15 libubsan1_10.2.1-6ubuntu1 libuchardet0_0.0.7-1 libudev1_247.1-4ubuntu1 libunistring2_0.9.10-4 libuuid1_2.36.1-1ubuntu2 libuv1_1.40.0-1 libvcflib-dev_1.0.1+dfsg-4 libvcflib-tools_1.0.1+dfsg-4 libvcflib1_1.0.1+dfsg-4 libwebp6_0.6.1-2 libwind0-heimdal_7.7.0+dfsg-2 libx11-6_2:1.7.0-2 libx11-data_2:1.7.0-2 libxau6_1:1.0.9-0ubuntu1 libxcb-render0_1.14-2.1 libxcb-shm0_1.14-2.1 libxcb1_1.14-2.1 libxdmcp6_1:1.1.3-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxft2_2.3.3-0ubuntu1 libxml2_2.9.10+dfsg-6.3build1 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.2.0-1 libxxhash0_0.8.0-2 libzstd1_1.4.8+dfsg-1 linux-libc-dev_5.10.0-12.13 littler_0.3.12-1 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu8 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-5 mailcap_3.68ubuntu1 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_3.0.0 mime-support_3.66 mount_2.36.1-1ubuntu2 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 openssl_1.1.1f-1ubuntu5 optipng_0.7.7-1 parallel_20161222-1.1 passwd_1:4.8.1-1ubuntu8 patch_2.7.6-7 perl_5.32.0-6 perl-base_5.32.0-6 perl-modules-5.30_5.30.3-4 perl-modules-5.32_5.32.0-6 pinentry-curses_1.1.0-4build1 pkg-config_0.29.2-1ubuntu1 pkgbinarymangler_146 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu2 python3_3.9.1-1 python3-minimal_3.9.1-1 python3.9_3.9.1-2 python3.9-minimal_3.9.1-2 r-base-core_4.0.3-1 r-cran-assertthat_0.2.1-2build1 r-cran-backports_1.2.1-1 r-cran-brio_1.1.0-2 r-cran-callr_3.5.1-1 r-cran-cli_2.2.0-1 r-cran-colorspace_2.0-0+dfsg-1 r-cran-crayon_1.3.4-5 r-cran-desc_1.2.0-3build1 r-cran-diffobj_0.3.2-1 r-cran-digest_0.6.27-1 r-cran-ellipsis_0.3.1-1build1 r-cran-evaluate_0.14-2build1 r-cran-fansi_0.4.1-1build1 r-cran-farver_2.0.3-1build2 r-cran-ggplot2_3.3.2+dfsg-2 r-cran-glue_1.4.2-1 r-cran-gridbase_0.4-7-5build1 r-cran-gtable_0.3.0+dfsg-2build1 r-cran-isoband_0.2.3-2 r-cran-jsonlite_1.7.2+dfsg-1 r-cran-labeling_0.4.2-1 r-cran-lattice_0.20-41-1build1 r-cran-lifecycle_0.2.0-2build1 r-cran-littler_0.3.12-1 r-cran-magrittr_2.0.1-1 r-cran-mass_7.3-53-1 r-cran-matrix_1.3-2-1 r-cran-mgcv_1.8-33-1 r-cran-munsell_0.5.0-2build1 r-cran-nlme_3.1.151-1 r-cran-pillar_1.4.7-1 r-cran-pkgbuild_1.1.0-1 r-cran-pkgconfig_2.0.3-2build1 r-cran-pkgkitten_0.2.0-1 r-cran-pkgload_1.1.0-1 r-cran-plyr_1.8.6-2build1 r-cran-praise_1.0.0-4build1 r-cran-prettyunits_1.1.1-2build1 r-cran-processx_3.4.5-1 r-cran-ps_1.4.0-1 r-cran-r6_2.5.0-1 r-cran-rcolorbrewer_1.1-2-3 r-cran-rcpp_1.0.6-1 r-cran-rematch2_2.1.2-2build1 r-cran-rlang_0.4.8-1 r-cran-rprojroot_1.3-2-3build1 r-cran-rstudioapi_0.13-1 r-cran-scales_1.1.1-1build1 r-cran-testthat_3.0.0-1 r-cran-tibble_3.0.4-1 r-cran-utf8_1.1.4-2 r-cran-vctrs_0.3.6-1 r-cran-viridislite_0.3.0-4 r-cran-waldo_0.2.3-2 r-cran-withr_2.3.0-1 readline-common_8.1-1 rpcsvc-proto_1.4.2-0ubuntu4 samtools_1.11-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-freebayes-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.14 sysstat_12.4.2-1 systemd_247.1-4ubuntu1 systemd-sysv_247.1-4ubuntu1 systemd-timesyncd_247.1-4ubuntu1 sysvinit-utils_2.96-5ubuntu1 tar_1.32+dfsg-1 tzdata_2020f-1ubuntu2 ubuntu-keyring_2020.06.17.1 ucf_3.0043 unzip_6.0-25ubuntu1 util-linux_2.36.1-1ubuntu2 x11-common_1:7.7+19ubuntu15 xdg-utils_1.1.3-2ubuntu2 xz-utils_5.2.4-1ubuntu1 zip_3.0-11build1 zlib1g_1:1.2.11.dfsg-2ubuntu4 zlib1g-dev_1:1.2.11.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Jun 1 07:31:39 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./freebayes_1.3.2-3.dsc dpkg-source: info: extracting freebayes in /<> dpkg-source: info: unpacking freebayes_1.3.2.orig.tar.gz dpkg-source: info: unpacking freebayes_1.3.2-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_libs.patch dpkg-source: info: applying fix_all_target.patch dpkg-source: info: applying fix_test.patch dpkg-source: info: applying vcffirstheader.patch dpkg-source: info: applying skip_failing_test.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying 1ad5cd64ac7270aac03d58d2dba0861ecc85b6b6.patch dpkg-source: info: applying hardening dpkg-source: info: applying version_bump Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20745858 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20745858 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20745858 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package freebayes dpkg-buildpackage: info: source version 1.3.2-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean dh clean --no-parallel dh_auto_clean -O--no-parallel make -j1 clean make[1]: Entering directory '/<>' cd src && make clean make[2]: Entering directory '/<>/src' rm -rf *.o *.cgh *~ freebayes alleles ../bin/freebayes ../bin/alleles ../vcflib/*.o ../vcflib/tabixpp/*.{o,a} tabix.hpp make[2]: Leaving directory '/<>/src' rm -fr bin/* make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--no-parallel dh_clean -O--no-parallel debian/rules binary-arch dh binary-arch --no-parallel dh_update_autotools_config -a -O--no-parallel dh_autoreconf -a -O--no-parallel dh_auto_configure -a -O--no-parallel debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- CXXFLAGS="-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64" make -j1 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64" make[2]: Entering directory '/<>' cd src && make make[3]: Entering directory '/<>/src' DETECTED_VERSION = v1.3.2 CURRENT_VERSION = Updating version file. g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c freebayes.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c BedReader.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c CNV.cpp gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++11 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c fastlz.c cc1: warning: command-line option ‘-std=gnu++11’ is valid for C++/ObjC++ but not for C g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Utility.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Fasta.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Parameters.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Allele.cpp Allele.cpp: In member function ‘const string Allele::base() const’: Allele.cpp:297:1: warning: control reaches end of non-void function [-Wreturn-type] 297 | } | ^ g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Sample.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Result.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c AlleleParser.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Genotype.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c DataLikelihood.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Multinomial.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Ewens.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c ResultData.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Dirichlet.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Marginals.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c split.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c LeftAlign.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c IndelAllele.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c Bias.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o Contamination.o Contamination.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c NonCall.cpp g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c SegfaultHandler.cpp g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp freebayes.o BedReader.o CNV.o fastlz.o Fasta.o Parameters.o Allele.o Sample.o Result.o AlleleParser.o Utility.o Genotype.o DataLikelihood.o Multinomial.o Ewens.o ResultData.o Dirichlet.o Marginals.o split.o LeftAlign.o IndelAllele.o Bias.o Contamination.o NonCall.o SegfaultHandler.o -o ../bin/freebayes -lz -pthread -lbamtools -ltabixpp -lz -lm -lpthread -lvcflib -lsmithwaterman -ldisorder -lfastahack -lhts -lseqlib -lbwa -lz -ljsoncpp -lz -pthread g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp -c bamleftalign.cpp g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -D_FILE_OFFSET_BITS=64 -I../ttmath -I/usr/include/bamtools -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -I/usr/include/jsoncpp bamleftalign.o BedReader.o CNV.o fastlz.o Fasta.o Parameters.o Allele.o Sample.o Result.o AlleleParser.o Utility.o Genotype.o DataLikelihood.o Multinomial.o Ewens.o ResultData.o Dirichlet.o Marginals.o split.o LeftAlign.o IndelAllele.o Bias.o Contamination.o NonCall.o SegfaultHandler.o -o ../bin/bamleftalign -lz -pthread -lbamtools -ltabixpp -lz -lm -lpthread -lvcflib -lsmithwaterman -ldisorder -lfastahack -lhts -lseqlib -lbwa -lz -ljsoncpp -lz -pthread make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' mkdir -p /<>/test/bash-tap/ for bt in /<>/debian/bash-tap/* ; do ln -s ${bt} /<>/test/bash-tap/`basename ${bt}` ; done ln -s /<>/debian/test-simple-bash/lib test/test-simple-bash chmod +x vcflib/scripts/vcffirstheader # export PATH=/usr/lib/vcflib/binaries/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games dh_auto_test echo "Tests should be run" && PATH=/usr/lib/vcflib/binaries/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games dh_auto_test && echo "Tests were running successfully" Tests should be run make -j1 test make[2]: Entering directory '/<>' cd test && make test make[3]: Entering directory '/<>/test' prove -v t t/00_region_and_target_handling.t .. 1..11 ok 1 - ref:4-5 ref:6-7 are empty ok 2 - ref:4 ref:6 are empty ok 3 - ref:5-6 ref:7-8 ok 4 - ref:5 ref:7 ok 5 - ref:5- ok 6 - full output ok 7 - --targets t/../00_region_and_target_handling.t.bed ok 8 - --region ref ok 9 - ref:1,0- ok 10 - ref:1,0-1,1 ok 11 - region outside of bounds error ok [E::idx_find_and_load] Could not retrieve index file for '-' Random access with SetRegion not available for STDIN reading (no index file) ERROR(freebayes): Could not SetRegion to q:1..10000 t/01_call_variants.t ............... 1..23 ok 1 - variant calling recovers most of the GiAB variants in a test region ok 2 - freebayes produces the same number of calls if targeted per site or called without targets ok 3 - a targets bed file can be used with the same effect as running by region ok 4 - reading from stdin or not makes no difference ok 5 - freebayes processes all alignments in input ok 6 - freebayes correctly handles variant input ok 7 - freebayes puts required variants in output ok 8 - freebayes limits calls to input variants correctly ok 9 - freebayes reports all input variants even when there is no input data ok 10 - freebayes handles region and variant input ok 11 - freebayes limits to variant input correctly when region is given ok 12 - freebayes handles variant input and reading from stdin ok 13 - freebayes limits to variant input when reading from stdin ok 14 - freebayes handles region, stdin, and variant input ok 15 - freebayes bails out when given a gzipped or corrupted reference ok 16 - running in parallel makes no difference ok 17 - freebayes handles region and variant input even with : in contig names ok 18 - freebayes can handle spliced reads ok 19 - freebayes produces the expected number of lines of gVCF output ok 20 - freebayes produces the expected number of lines of gVCF output ok 21 - freebayes produces the expected number of lines of gVCF output ok 22 - the CNV map may be used to specify per-sample copy numbers ok 23 - freebayes makes the expected number of calls when capping coverage ok t/02_multi_bam.t ................... 1..7 ok 1 - freebayes calls from two identical BAMs ok 2 - freebayes calls from two BAMs with different samples for different read groups ok 3 - freebayes calls from two BAMs with different technologies for different read groups ok 4 - freebayes rejects two BAMs with different samples for same read groups ok 5 - freebayes rejects two BAMs with different technologies for same read groups ok 6 - freebayes calls multiple alts from two different BAMs ok 7 - freebayes rejects two BAMs with the same name ok t/03_reference_bases.t ............. 1..3 ok 1 - freebayes rejects invalid reference ok 2 - freebayes does not put uppercase IUPAC bases in VCFs ok 3 - freebayes does not put lowercase IUPAC bases in VCFs ok All tests successful. Files=4, Tests=44, 14 wallclock secs ( 0.03 usr 0.01 sys + 12.29 cusr 1.82 csys = 14.15 CPU) Result: PASS make[3]: Leaving directory '/<>/test' make[2]: Leaving directory '/<>' Tests were running successfully rm -rf /<>/test/bash-tap rm test/test-simple-bash/lib make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--no-parallel dh_prep -a -O--no-parallel debian/rules override_dh_auto_install make[1]: Entering directory '/<>' echo "Skip autoinstall process - files are moved around by dh_install" Skip autoinstall process - files are moved around by dh_install make[1]: Leaving directory '/<>' dh_install -a -O--no-parallel dh_installdocs -a -O--no-parallel dh_installchangelogs -a -O--no-parallel dh_installexamples -a -O--no-parallel dh_installsystemduser -a -O--no-parallel dh_perl -a -O--no-parallel dh_link -a -O--no-parallel dh_strip_nondeterminism -a -O--no-parallel dh_compress -a -O--no-parallel dh_fixperms -a -O--no-parallel dh_missing -a -O--no-parallel dh_dwz -a -a -O--no-parallel dh_strip -a -a -O--no-parallel dh_makeshlibs -a -a -O--no-parallel dh_shlibdeps -a -a -O--no-parallel dh_installdeb -a -O--no-parallel dh_gencontrol -a -O--no-parallel dh_md5sums -a -O--no-parallel dh_builddeb -a -O--no-parallel INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing freebayes-dbgsym (in debian/.debhelper/freebayes/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing freebayes (in debian/freebayes); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/freebayes/dbgsym-root/DEBIAN/control, package freebayes-dbgsym, directory debian/.debhelper/freebayes/dbgsym-root dpkg-deb: building package 'freebayes-dbgsym' in 'debian/.debhelper/scratch-space/build-freebayes/freebayes-dbgsym_1.3.2-3_s390x.deb'. pkgstripfiles: processing control file: debian/freebayes/DEBIAN/control, package freebayes, directory debian/freebayes pkgstripfiles: Running PNG optimization (using 4 cpus) for package freebayes ... pkgstripfiles: No PNG files. dpkg-deb: building package 'freebayes' in '../freebayes_1.3.2-3_s390x.deb'. Renaming freebayes-dbgsym_1.3.2-3_s390x.deb to freebayes-dbgsym_1.3.2-3_s390x.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../freebayes_1.3.2-3_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-01-16T00:07:34Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ freebayes_1.3.2-3_s390x.changes: -------------------------------- Format: 1.8 Date: Mon, 01 Jun 2020 02:50:39 +0530 Source: freebayes Binary: freebayes Architecture: s390x Version: 1.3.2-3 Distribution: hirsute-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Pranav Ballaney Description: freebayes - Bayesian haplotype-based polymorphism discovery and genotyping Changes: freebayes (1.3.2-3) unstable; urgency=medium . * Team upload . [ Pranav Ballaney ] * Install test data * Add autopkgtests * Install docs and binaries . [ Andreas Tille ] * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit. * Add missing files to debian/source/include-binaries Checksums-Sha1: 404b636de344e6db093dd38565c6743af03574fc 10303580 freebayes-dbgsym_1.3.2-3_s390x.ddeb 5bbb5ac37ac0d00a0c755e32fe55eb6e23f21775 11574 freebayes_1.3.2-3_s390x.buildinfo bcf274ab65dff99f6accbcf8797c2c68b85edd76 1368552 freebayes_1.3.2-3_s390x.deb Checksums-Sha256: 4c93ec242e182dcb3e5dc7ee1f8bebe3c20cbe71ac4413825800ff4632658c55 10303580 freebayes-dbgsym_1.3.2-3_s390x.ddeb cc20fd1f8e047c615f91a591daa79cc429cfc4f1805a85f511140e71fb65102e 11574 freebayes_1.3.2-3_s390x.buildinfo 50d1e07e340b111cb9c3f38e5ab4d4932a91ec95ce762c876a72bfdf95e2df94 1368552 freebayes_1.3.2-3_s390x.deb Files: c5d89b3a950ed8e68dc7113140daa437 10303580 debug optional freebayes-dbgsym_1.3.2-3_s390x.ddeb 36504db559fe306de783452d50efc0bd 11574 science optional freebayes_1.3.2-3_s390x.buildinfo 5b7d20dd198c9abb792b9bb59b33b110 1368552 science optional freebayes_1.3.2-3_s390x.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: freebayes Binary: freebayes freebayes-dbgsym Architecture: s390x Version: 1.3.2-3 Checksums-Md5: c5d89b3a950ed8e68dc7113140daa437 10303580 freebayes-dbgsym_1.3.2-3_s390x.ddeb 5b7d20dd198c9abb792b9bb59b33b110 1368552 freebayes_1.3.2-3_s390x.deb Checksums-Sha1: 404b636de344e6db093dd38565c6743af03574fc 10303580 freebayes-dbgsym_1.3.2-3_s390x.ddeb bcf274ab65dff99f6accbcf8797c2c68b85edd76 1368552 freebayes_1.3.2-3_s390x.deb Checksums-Sha256: 4c93ec242e182dcb3e5dc7ee1f8bebe3c20cbe71ac4413825800ff4632658c55 10303580 freebayes-dbgsym_1.3.2-3_s390x.ddeb 50d1e07e340b111cb9c3f38e5ab4d4932a91ec95ce762c876a72bfdf95e2df94 1368552 freebayes_1.3.2-3_s390x.deb Build-Origin: Ubuntu Build-Architecture: s390x Build-Date: Sat, 16 Jan 2021 00:07:34 +0000 Build-Path: /<> Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.69-14), automake (= 1:1.16.3-2ubuntu1), autopoint (= 0.21-3ubuntu1), autotools-dev (= 20180224.1+nmu1), base-files (= 11ubuntu16), base-passwd (= 3.5.48), bash (= 5.1-1ubuntu1), bc (= 1.07.1-2build2), binutils (= 2.35.90.20210113-1ubuntu1), binutils-common (= 2.35.90.20210113-1ubuntu1), binutils-s390x-linux-gnu (= 2.35.90.20210113-1ubuntu1), bsdextrautils (= 2.36.1-1ubuntu2), bsdutils (= 1:2.36.1-1ubuntu2), build-essential (= 12.8ubuntu3), bzip2 (= 1.0.8-4ubuntu2), ca-certificates (= 20200601), cmake (= 3.18.4-1ubuntu3), cmake-data (= 3.18.4-1ubuntu3), coreutils (= 8.32-4ubuntu2), cpp (= 4:10.2.0-1ubuntu1), cpp-10 (= 10.2.1-6ubuntu1), dash (= 0.5.11+git20200708+dd9ef66+really0.5.11+git20200708+dd9ef66-5ubuntu1), debconf (= 1.5.74), debhelper (= 13.3.1ubuntu1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3ubuntu1), dpkg (= 1.20.7.1ubuntu1), dpkg-dev (= 1.20.7.1ubuntu1), dwz (= 0.13+20201015-2), file (= 1:5.39-3), findutils (= 4.7.0-1ubuntu2), fontconfig (= 2.13.1-4.2ubuntu2), fontconfig-config (= 2.13.1-4.2ubuntu2), fonts-dejavu-core (= 2.37-2), g++ (= 4:10.2.0-1ubuntu1), g++-10 (= 10.2.1-6ubuntu1), gcc (= 4:10.2.0-1ubuntu1), gcc-10 (= 10.2.1-6ubuntu1), gcc-10-base (= 10.2.1-6ubuntu1), gettext (= 0.21-3ubuntu1), gettext-base (= 0.21-3ubuntu1), grep (= 3.6-1), groff-base (= 1.22.4-5), gzip (= 1.10-2ubuntu1), hostname (= 3.23), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-9), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.4.3-2), libasan6 (= 10.2.1-6ubuntu1), libasn1-8-heimdal (= 7.7.0+dfsg-2), libatomic1 (= 10.2.1-6ubuntu1), libattr1 (= 1:2.4.48-6), libaudit-common (= 1:2.8.5-3ubuntu3), libaudit1 (= 1:2.8.5-3ubuntu3), libbamtools-dev (= 2.5.1+dfsg-7build1), libbamtools2.5.1 (= 2.5.1+dfsg-7build1), libbinutils (= 2.35.90.20210113-1ubuntu1), libblas3 (= 3.9.0-3ubuntu1), libblkid1 (= 2.36.1-1ubuntu2), libbrotli1 (= 1.0.9-2build2), libbsd0 (= 0.10.0-1), libbwa-dev (= 0.7.17-5), libbz2-1.0 (= 1.0.8-4ubuntu2), libc-bin (= 2.32-0ubuntu6), libc-dev-bin (= 2.32-0ubuntu6), libc6 (= 2.32-0ubuntu6), libc6-dev (= 2.32-0ubuntu6), libcairo2 (= 1.16.0-5), libcap-ng0 (= 0.7.9-2.2build1), libcap2 (= 1:2.44-1), libcc1-0 (= 10.2.1-6ubuntu1), libcom-err2 (= 1.45.6-1ubuntu1), libcrypt-dev (= 1:4.4.17-1ubuntu1), libcrypt1 (= 1:4.4.17-1ubuntu1), libctf-nobfd0 (= 2.35.90.20210113-1ubuntu1), libctf0 (= 2.35.90.20210113-1ubuntu1), libcurl3-gnutls (= 7.74.0-1ubuntu1), libcurl4 (= 7.74.0-1ubuntu1), libcurl4-gnutls-dev (= 7.74.0-1ubuntu1), libdatrie1 (= 0.2.12-3), libdb5.3 (= 5.3.28+dfsg1-0.6ubuntu3), libdebconfclient0 (= 0.256ubuntu1), libdebhelper-perl (= 13.3.1ubuntu1), libdeflate-dev (= 1.7-1), libdeflate0 (= 1.7-1), libdisorder-dev (= 0.0.2+git20130809.8062ee1-2), libdisorder0 (= 0.0.2+git20130809.8062ee1-2), libdpkg-perl (= 1.20.7.1ubuntu1), libelf1 (= 0.182-3), libexpat1 (= 2.2.10-1), libfastahack-dev (= 1.0.0+dfsg-7), libfastahack0 (= 1.0.0+dfsg-7), libffi8ubuntu1 (= 3.4~20200819gead65ca871-0ubuntu3), libfile-stripnondeterminism-perl (= 1.9.0-1), libfml-dev (= 0.1+git20190320.b499514-1), libfml0 (= 0.1+git20190320.b499514-1), libfontconfig1 (= 2.13.1-4.2ubuntu2), libfreetype6 (= 2.10.4+dfsg-1), libfribidi0 (= 1.0.8-2), libgcc-10-dev (= 10.2.1-6ubuntu1), libgcc-s1 (= 10.2.1-6ubuntu1), libgcrypt20 (= 1.8.7-2ubuntu1), libgdbm-compat4 (= 1.19-1), libgdbm6 (= 1.19-1), libgfortran5 (= 10.2.1-6ubuntu1), libglib2.0-0 (= 2.66.4-1), libgmp10 (= 2:6.2.0+dfsg-6ubuntu1), libgnutls30 (= 3.7.0-5ubuntu1), libgomp1 (= 10.2.1-6ubuntu1), libgpg-error0 (= 1.38-2), libgraphite2-3 (= 1.3.14-1), libgssapi-krb5-2 (= 1.17-10ubuntu1), libgssapi3-heimdal (= 7.7.0+dfsg-2), libharfbuzz0b (= 2.6.7-1ubuntu1), libhcrypto4-heimdal (= 7.7.0+dfsg-2), libheimbase1-heimdal (= 7.7.0+dfsg-2), libheimntlm0-heimdal (= 7.7.0+dfsg-2), libhogweed6 (= 3.6-2), libhts-dev (= 1.11-4), libhts3 (= 1.11-4), libhx509-5-heimdal (= 7.7.0+dfsg-2), libice6 (= 2:1.0.10-1), libicu67 (= 67.1-5), libidn2-0 (= 2.3.0-5), libisl23 (= 0.23-1), libitm1 (= 10.2.1-6ubuntu1), libjbig0 (= 2.1-3.1build1), libjpeg-turbo8 (= 2.0.3-0ubuntu2), libjpeg8 (= 8c-2ubuntu8), libjsoncpp-dev (= 1.9.4-4), libjsoncpp24 (= 1.9.4-4), libk5crypto3 (= 1.17-10ubuntu1), libkeyutils1 (= 1.6.1-2ubuntu1), libkrb5-26-heimdal (= 7.7.0+dfsg-2), libkrb5-3 (= 1.17-10ubuntu1), libkrb5support0 (= 1.17-10ubuntu1), liblapack3 (= 3.9.0-3ubuntu1), libldap-2.4-2 (= 2.4.56+dfsg-1ubuntu1), liblz4-1 (= 1.9.3-0ubuntu1), liblzma-dev (= 5.2.4-1ubuntu1), liblzma5 (= 5.2.4-1ubuntu1), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.36.1-1ubuntu2), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libncurses6 (= 6.2+20201114-2), libncursesw6 (= 6.2+20201114-2), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.42.0-1), libnsl-dev (= 1.3.0-0ubuntu3), libnsl2 (= 1.3.0-0ubuntu3), libp11-kit0 (= 0.23.22-1), libpam-modules (= 1.3.1-5ubuntu6), libpam-modules-bin (= 1.3.1-5ubuntu6), libpam-runtime (= 1.3.1-5ubuntu6), libpam0g (= 1.3.1-5ubuntu6), libpango-1.0-0 (= 1.46.2-3), libpangocairo-1.0-0 (= 1.46.2-3), libpangoft2-1.0-0 (= 1.46.2-3), libpaper-utils (= 1.1.28), libpaper1 (= 1.1.28), libpcre2-8-0 (= 10.35-2ubuntu1), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.0-6), libpipeline1 (= 1.5.3-1), libpixman-1-0 (= 0.40.0-1), libpng16-16 (= 1.6.37-3), libprocps8 (= 2:3.3.16-5ubuntu2), libpsl5 (= 0.21.0-1.1ubuntu1), libpython3-stdlib (= 3.9.1-1), libpython3.9-minimal (= 3.9.1-2), libpython3.9-stdlib (= 3.9.1-2), libreadline8 (= 8.1-1), librhash0 (= 1.4.1-1), libroken18-heimdal (= 7.7.0+dfsg-2), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build2), libsasl2-2 (= 2.1.27+dfsg-2ubuntu1), libsasl2-modules-db (= 2.1.27+dfsg-2ubuntu1), libseccomp2 (= 2.4.3-1ubuntu6), libselinux1 (= 3.1-2build2), libsensors-config (= 1:3.6.0-2ubuntu1), libsensors5 (= 1:3.6.0-2ubuntu1), libseqlib-dev (= 1.1.2+dfsg-9ubuntu3), libseqlib1 (= 1.1.2+dfsg-9ubuntu3), libsigsegv2 (= 2.12-3), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.36.1-1ubuntu2), libsmithwaterman-dev (= 0.0+git20160702.2610e25-11), libsmithwaterman0 (= 0.0+git20160702.2610e25-11), libsqlite3-0 (= 3.34.0-1), libssh-4 (= 0.9.5-1), libssl1.1 (= 1.1.1f-1ubuntu5), libssw-dev (= 1.1-12), libssw0 (= 1.1-12), libstdc++-10-dev (= 10.2.1-6ubuntu1), libstdc++6 (= 10.2.1-6ubuntu1), libsub-override-perl (= 0.09-2), libsystemd0 (= 247.1-4ubuntu1), libtabixpp-dev (= 1.1.0-3), libtabixpp0 (= 1.1.0-3), libtasn1-6 (= 4.16.0-2), libtcl8.6 (= 8.6.11+dfsg-1), libthai-data (= 0.1.28-3), libthai0 (= 0.1.28-3), libtiff5 (= 4.2.0-1), libtinfo6 (= 6.2+20201114-2), libtirpc-common (= 1.3.1-1), libtirpc-dev (= 1.3.1-1), libtirpc3 (= 1.3.1-1), libtk8.6 (= 8.6.11-1), libtool (= 2.4.6-15), libubsan1 (= 10.2.1-6ubuntu1), libuchardet0 (= 0.0.7-1), libudev1 (= 247.1-4ubuntu1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-1ubuntu2), libuv1 (= 1.40.0-1), libvcflib-dev (= 1.0.1+dfsg-4), libvcflib-tools (= 1.0.1+dfsg-4), libvcflib1 (= 1.0.1+dfsg-4), libwebp6 (= 0.6.1-2), libwind0-heimdal (= 7.7.0+dfsg-2), libx11-6 (= 2:1.7.0-2), libx11-data (= 2:1.7.0-2), libxau6 (= 1:1.0.9-0ubuntu1), libxcb-render0 (= 1.14-2.1), libxcb-shm0 (= 1.14-2.1), libxcb1 (= 1.14-2.1), libxdmcp6 (= 1:1.1.3-0ubuntu1), libxext6 (= 2:1.3.4-0ubuntu1), libxft2 (= 2.3.3-0ubuntu1), libxml2 (= 2.9.10+dfsg-6.3build1), libxrender1 (= 1:0.9.10-1), libxss1 (= 1:1.2.3-1), libxt6 (= 1:1.2.0-1), libzstd1 (= 1.4.8+dfsg-1), linux-libc-dev (= 5.10.0-12.13), littler (= 0.3.12-1), login (= 1:4.8.1-1ubuntu8), lsb-base (= 11.1.0ubuntu2), m4 (= 1.4.18-5), mailcap (= 3.68ubuntu1), make (= 4.3-4ubuntu1), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), media-types (= 3.0.0), mime-support (= 3.66), ncurses-base (= 6.2+20201114-2), ncurses-bin (= 6.2+20201114-2), openssl (= 1.1.1f-1ubuntu5), parallel (= 20161222-1.1), patch (= 2.7.6-7), perl (= 5.32.0-6), perl-base (= 5.32.0-6), perl-modules-5.32 (= 5.32.0-6), pkg-config (= 0.29.2-1ubuntu1), po-debconf (= 1.0.21+nmu1), procps (= 2:3.3.16-5ubuntu2), python3 (= 3.9.1-1), python3-minimal (= 3.9.1-1), python3.9 (= 3.9.1-2), python3.9-minimal (= 3.9.1-2), r-base-core (= 4.0.3-1), r-cran-assertthat (= 0.2.1-2build1), r-cran-backports (= 1.2.1-1), r-cran-brio (= 1.1.0-2), r-cran-callr (= 3.5.1-1), r-cran-cli (= 2.2.0-1), r-cran-colorspace (= 2.0-0+dfsg-1), r-cran-crayon (= 1.3.4-5), r-cran-desc (= 1.2.0-3build1), r-cran-diffobj (= 0.3.2-1), r-cran-digest (= 0.6.27-1), r-cran-ellipsis (= 0.3.1-1build1), r-cran-evaluate (= 0.14-2build1), r-cran-fansi (= 0.4.1-1build1), r-cran-farver (= 2.0.3-1build2), r-cran-ggplot2 (= 3.3.2+dfsg-2), r-cran-glue (= 1.4.2-1), r-cran-gridbase (= 0.4-7-5build1), r-cran-gtable (= 0.3.0+dfsg-2build1), r-cran-isoband (= 0.2.3-2), r-cran-jsonlite (= 1.7.2+dfsg-1), r-cran-labeling (= 0.4.2-1), r-cran-lattice (= 0.20-41-1build1), r-cran-lifecycle (= 0.2.0-2build1), r-cran-littler (= 0.3.12-1), r-cran-magrittr (= 2.0.1-1), r-cran-mass (= 7.3-53-1), r-cran-matrix (= 1.3-2-1), r-cran-mgcv (= 1.8-33-1), r-cran-munsell (= 0.5.0-2build1), r-cran-nlme (= 3.1.151-1), r-cran-pillar (= 1.4.7-1), r-cran-pkgbuild (= 1.1.0-1), r-cran-pkgconfig (= 2.0.3-2build1), r-cran-pkgkitten (= 0.2.0-1), r-cran-pkgload (= 1.1.0-1), r-cran-plyr (= 1.8.6-2build1), r-cran-praise (= 1.0.0-4build1), r-cran-prettyunits (= 1.1.1-2build1), r-cran-processx (= 3.4.5-1), r-cran-ps (= 1.4.0-1), r-cran-r6 (= 2.5.0-1), r-cran-rcolorbrewer (= 1.1-2-3), r-cran-rcpp (= 1.0.6-1), r-cran-rematch2 (= 2.1.2-2build1), r-cran-rlang (= 0.4.8-1), r-cran-rprojroot (= 1.3-2-3build1), r-cran-rstudioapi (= 0.13-1), r-cran-scales (= 1.1.1-1build1), r-cran-testthat (= 3.0.0-1), r-cran-tibble (= 3.0.4-1), r-cran-utf8 (= 1.1.4-2), r-cran-vctrs (= 0.3.6-1), r-cran-viridislite (= 0.3.0-4), r-cran-waldo (= 0.2.3-2), r-cran-withr (= 2.3.0-1), readline-common (= 8.1-1), rpcsvc-proto (= 1.4.2-0ubuntu4), samtools (= 1.11-1), sed (= 4.7-1ubuntu1), sensible-utils (= 0.0.14), sysstat (= 12.4.2-1), sysvinit-utils (= 2.96-5ubuntu1), tar (= 1.32+dfsg-1), tzdata (= 2020f-1ubuntu2), ucf (= 3.0043), unzip (= 6.0-25ubuntu1), util-linux (= 2.36.1-1ubuntu2), x11-common (= 1:7.7+19ubuntu15), xdg-utils (= 1.1.3-2ubuntu2), xz-utils (= 5.2.4-1ubuntu1), zip (= 3.0-11build1), zlib1g (= 1:1.2.11.dfsg-2ubuntu4), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu4) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1590960039" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ freebayes_1.3.2-3_s390x.deb --------------------------- new Debian package, version 2.0. size 1368552 bytes: control archive=2048 bytes. 931 bytes, 18 lines control 4005 bytes, 48 lines md5sums Package: freebayes Version: 1.3.2-3 Architecture: s390x Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 4929 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libseqlib1 (>= 1.1.2+dfsg-5), libstdc++6 (>= 9), libtabixpp0 (>= 1.0.0), libvcflib1 (>= 1.0.1+dfsg), zlib1g (>= 1:1.1.4) Recommends: parallel Section: science Priority: optional Homepage: https://github.com/ekg/freebayes Description: Bayesian haplotype-based polymorphism discovery and genotyping FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment. drwxr-xr-x root/root 0 2020-05-31 21:20 ./ drwxr-xr-x root/root 0 2020-05-31 21:20 ./usr/ drwxr-xr-x root/root 0 2020-05-31 21:20 ./usr/bin/ -rwxr-xr-x root/root 2120272 2020-05-31 21:20 ./usr/bin/bamleftalign -rwxr-xr-x root/root 2181488 2020-05-31 21:20 ./usr/bin/freebayes drwxr-xr-x root/root 0 2020-05-31 21:20 ./usr/share/ drwxr-xr-x root/root 0 2020-05-31 21:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-05-31 21:20 ./usr/share/doc/freebayes/ -rw-r--r-- root/root 9516 2019-10-06 08:14 ./usr/share/doc/freebayes/README.md.gz -rw-r--r-- root/root 278 2020-05-31 21:20 ./usr/share/doc/freebayes/README.test -rw-r--r-- root/root 83 2020-05-31 21:20 ./usr/share/doc/freebayes/README.test_data -rw-r--r-- root/root 1278 2020-05-31 21:20 ./usr/share/doc/freebayes/changelog.Debian.gz -rw-r--r-- root/root 3194 2020-05-31 21:20 ./usr/share/doc/freebayes/copyright drwxr-xr-x root/root 0 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/ -rw-r--r-- root/root 201 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/Makefile -rw-r--r-- root/root 83 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/README.test_data -rw-r--r-- root/root 906 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/pipeline.sh drwxr-xr-x root/root 0 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/splice/ -rw-r--r-- root/root 22589 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/splice/1:883884-887618.bam -rw-r--r-- root/root 288 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/splice/1:883884-887618.bam.bai -rw-r--r-- root/root 3801 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/splice/1:883884-887618.fa -rw-r--r-- root/root 15 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/splice/1:883884-887618.fa.fai drwxr-xr-x root/root 0 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/t/ -rw-r--r-- root/root 3536 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/t/00_region_and_target_handling.t -rwxr-xr-x root/root 6496 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/t/01_call_variants.t -rwxr-xr-x root/root 2882 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/t/02_multi_bam.t -rw-r--r-- root/root 1349 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/t/03_reference_bases.t -rw-r--r-- root/root 246 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/targets.bed drwxr-xr-x root/root 0 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/test-simple-bash/ -rw-r--r-- root/root 17 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/test.alt -rw-r--r-- root/root 230 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/test.bam -rw-r--r-- root/root 96 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/test.bam.bai -rw-r--r-- root/root 112 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/test.bed -rw-r--r-- root/root 17 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/test.ref -rw-r--r-- root/root 15 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/test.ref.fai -rw-r--r-- root/root 550 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/test.vcf drwxr-xr-x root/root 0 2020-05-31 21:20 ./usr/share/doc/freebayes/examples/tiny/ -rw-r--r-- root/root 636 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/1read.bam -rw-r--r-- root/root 96 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/1read.bam.bai -rw-r--r-- root/root 287213 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.bam -rw-r--r-- root/root 96 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.bam.bai -rw-r--r-- root/root 16307 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.giab.vcf -rw-r--r-- root/root 287228 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.hla.bam -rw-r--r-- root/root 96 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.hla.bam.bai -rw-r--r-- root/root 12581 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/hla.fa -rw-r--r-- root/root 33 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/hla.fa.fai -rw-r--r-- root/root 2394 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/hla.vcf.gz -rw-r--r-- root/root 120 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/hla.vcf.gz.tbi -rw-r--r-- root/root 12565 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q with spaces.fa -rw-r--r-- root/root 16 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q with spaces.fa.fai -rw-r--r-- root/root 36 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q with spaces.regions -rw-r--r-- root/root 12565 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q.fa -rw-r--r-- root/root 16 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q.fa.fai -rw-r--r-- root/root 36 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q.regions -rw-r--r-- root/root 4168 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q.vcf.gz -rw-r--r-- root/root 102 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q.vcf.gz.tbi -rw-r--r-- root/root 2378 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q_spiked.vcf.gz -rw-r--r-- root/root 91 2019-10-06 08:14 ./usr/share/doc/freebayes/examples/tiny/q_spiked.vcf.gz.tbi -rw-r--r-- root/root 924 2020-05-31 21:20 ./usr/share/doc/freebayes/run-unit-test.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: s390x Build Type: any Build-Space: n/a Build-Time: 93 Distribution: hirsute-proposed Host Architecture: s390x Install-Time: 31 Job: freebayes_1.3.2-3.dsc Machine Architecture: s390x Package: freebayes Package-Time: 126 Source-Version: 1.3.2-3 Space: n/a Status: successful Version: 1.3.2-3 -------------------------------------------------------------------------------- Finished at 2021-01-16T00:07:34Z Build needed 00:02:06, no disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=hirsute --arch=s390x PACKAGEBUILD-20745858 Scanning for processes to kill in build PACKAGEBUILD-20745858