FastQC crashes with wrong class version of JAVA

Bug #1852910 reported by cement_head
6
This bug affects 1 person
Affects Status Importance Assigned to Milestone
fastqc (Ubuntu)
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Bug Description

This is the error in the terminal when I try to run FastQC:

Exception in thread "AWT-EventQueue-0" java.lang.UnsupportedClassVersionError: org/itadaki/bzip2/BZip2InputStream has been compiled by a more recent version of the Java Runtime (class file version 53.0), this version of the Java Runtime only recognizes class file versions up to 52.0
 at java.lang.ClassLoader.defineClass1(Native Method)
 at java.lang.ClassLoader.defineClass(ClassLoader.java:763)
 at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
 at java.net.URLClassLoader.defineClass(URLClassLoader.java:468)
 at java.net.URLClassLoader.access$100(URLClassLoader.java:74)
 at java.net.URLClassLoader$1.run(URLClassLoader.java:369)
 at java.net.URLClassLoader$1.run(URLClassLoader.java:363)
 at java.security.AccessController.doPrivileged(Native Method)
 at java.net.URLClassLoader.findClass(URLClassLoader.java:362)
 at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
 at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:349)
 at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
 at uk.ac.babraham.FastQC.Sequence.SequenceFactory.getSequenceFile(SequenceFactory.java:106)
 at uk.ac.babraham.FastQC.Sequence.SequenceFactory.getSequenceFile(SequenceFactory.java:62)
 at uk.ac.babraham.FastQC.FastQCApplication.openFile(FastQCApplication.java:195)
 at uk.ac.babraham.FastQC.FastQCMenuBar.actionPerformed(FastQCMenuBar.java:122)
 at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022)
 at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2348)
 at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402)
 at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259)
 at javax.swing.AbstractButton.doClick(AbstractButton.java:376)
 at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:842)
 at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:886)
 at java.awt.Component.processMouseEvent(Component.java:6539)
 at javax.swing.JComponent.processMouseEvent(JComponent.java:3324)
 at java.awt.Component.processEvent(Component.java:6304)
 at java.awt.Container.processEvent(Container.java:2239)
 at java.awt.Component.dispatchEventImpl(Component.java:4889)
 at java.awt.Container.dispatchEventImpl(Container.java:2297)
 at java.awt.Component.dispatchEvent(Component.java:4711)
 at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4904)
 at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4535)
 at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4476)
 at java.awt.Container.dispatchEventImpl(Container.java:2283)
 at java.awt.Window.dispatchEventImpl(Window.java:2746)
 at java.awt.Component.dispatchEvent(Component.java:4711)
 at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
 at java.awt.EventQueue.access$500(EventQueue.java:97)
 at java.awt.EventQueue$3.run(EventQueue.java:709)
 at java.awt.EventQueue$3.run(EventQueue.java:703)
 at java.security.AccessController.doPrivileged(Native Method)
 at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
 at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
 at java.awt.EventQueue$4.run(EventQueue.java:733)
 at java.awt.EventQueue$4.run(EventQueue.java:731)
 at java.security.AccessController.doPrivileged(Native Method)
 at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
 at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
 at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
 at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
 at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
 at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
 at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
 at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)

ProblemType: Bug
DistroRelease: Ubuntu 18.04
Package: fastqc 0.11.4+dfsg-3
ProcVersionSignature: Ubuntu 5.3.0-22.24+system76~1573660262~18.04~d11b582~dev-generic 5.3.7
Uname: Linux 5.3.0-22-generic x86_64
ApportVersion: 2.20.9-0ubuntu7.9
Architecture: amd64
CurrentDesktop: Unity:Unity7:ubuntu
Date: Sat Nov 16 17:18:10 2019
InstallationDate: Installed on 2019-01-15 (305 days ago)
InstallationMedia: Ubuntu 18.04.1 LTS "Bionic Beaver" - Release amd64 (20180725)
PackageArchitecture: all
SourcePackage: fastqc
UpgradeStatus: No upgrade log present (probably fresh install)

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cement_head (andorjkiss) wrote :
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