Ubuntu
fastml package

fastml 3.11-3 source package in Ubuntu

Changelog

fastml (3.11-3) unstable; urgency=medium

  * Standards-Version: 4.5.1 (routine-update)
  * debhelper-compat 13 (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * watch file standard 4 (routine-update)

 -- Andreas Tille <email address hidden>  Thu, 17 Dec 2020 15:31:13 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Mantic release universe misc
Lunar release universe misc
Jammy release universe misc

Downloads

File Size SHA-256 Checksum
fastml_3.11-3.dsc 1.9 KiB 7b56278953ec57694b173940c844184ca360d50666205e2e989372e892553f26
fastml_3.11.orig.tar.gz 829.2 KiB 2d1ec87116eae1163177631ad39083db01cdd78ffb8d119bebbdbb6a43e99451
fastml_3.11-3.debian.tar.xz 9.8 KiB f9a00304da244a0bc0561a3723a633bc9690766687c46c11ea8af18aa5223617

No changes file available.

Binary packages built by this source

fastml: maximum likelihood ancestral amino-acid sequence reconstruction

 FastML is a bioinformatics tool for the reconstruction of ancestral
 sequences based on the phylogenetic relations between homologous
 sequences. FastML runs several algorithms that reconstruct the ancestral
 sequences with emphasis on an accurate reconstruction of both indels and
 characters. For character reconstruction the previously described FastML
 algorithms are used to efficiently infer the most likely ancestral
 sequences for each internal node of the tree. Both joint and the
 marginal reconstructions are provided. For indels reconstruction the
 sequences are first coded according to the indel events detected within
 the multiple sequence alignment (MSA) and then a state-of-the-art
 likelihood model is used to reconstruct ancestral indels states. The
 results are the most probable sequences, together with posterior
 probabilities for each character and indel at each sequence position for
 each internal node of the tree. FastML is generic and is applicable for
 any type of molecular sequences (nucleotide, protein, or codon
 sequences).

fastml-dbgsym: debug symbols for fastml