Ubuntu
fastml package

fastml 3.11-2build1 source package in Ubuntu

Changelog

fastml (3.11-2build1) focal; urgency=medium

  * No-change rebuild for libgcc-s1 package name change.

 -- Matthias Klose <email address hidden>  Sun, 22 Mar 2020 16:40:12 +0100

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Uploaded by:
Matthias Klose
Uploaded to:
Focal
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal release universe misc

Downloads

File Size SHA-256 Checksum
fastml_3.11.orig.tar.gz 829.2 KiB 2d1ec87116eae1163177631ad39083db01cdd78ffb8d119bebbdbb6a43e99451
fastml_3.11-2build1.debian.tar.xz 9.7 KiB 6880ccee6b658cc1ed78fc6f4233596b714b3c1e477e430923d7aedc626b5aff
fastml_3.11-2build1.dsc 1.9 KiB 3d0b54fee8d19fc057d85ee906565e9041efdf1bf6ed8bee6a73b4960370a91d

Available diffs

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Binary packages built by this source

fastml: maximum likelihood ancestral amino-acid sequence reconstruction

 FastML is a bioinformatics tool for the reconstruction of ancestral
 sequences based on the phylogenetic relations between homologous
 sequences. FastML runs several algorithms that reconstruct the ancestral
 sequences with emphasis on an accurate reconstruction of both indels and
 characters. For character reconstruction the previously described FastML
 algorithms are used to efficiently infer the most likely ancestral
 sequences for each internal node of the tree. Both joint and the
 marginal reconstructions are provided. For indels reconstruction the
 sequences are first coded according to the indel events detected within
 the multiple sequence alignment (MSA) and then a state-of-the-art
 likelihood model is used to reconstruct ancestral indels states. The
 results are the most probable sequences, together with posterior
 probabilities for each character and indel at each sequence position for
 each internal node of the tree. FastML is generic and is applicable for
 any type of molecular sequences (nucleotide, protein, or codon
 sequences).

fastml-dbgsym: debug symbols for fastml