estscan 3.0.3-3build1 source package in Ubuntu


estscan (3.0.3-3build1) focal; urgency=medium

  * No-change rebuild for libgcc-s1 package name change.

 -- Matthias Klose <email address hidden>  Sun, 22 Mar 2020 16:39:54 +0100

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Matthias Klose
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Debian Med
Medium Urgency

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Series Pocket Published Component Section
Groovy release universe misc
Focal release universe misc


File Size SHA-256 Checksum
estscan_3.0.3.orig.tar.gz 45.3 KiB 037dc8770681ed12406a789ea292462a4ce5d89b0e906a1a3340aa4debc71e2f
estscan_3.0.3-3build1.debian.tar.xz 4.5 KiB dbe9f367b5bb2313ce28bd2e92ac110f7f4443f6169265ec06d8441c1bb47b06
estscan_3.0.3-3build1.dsc 1.9 KiB 25c8ab435dee9d801a4b8561e428738ec6b3cda045997c745ceb1ce04987f14c

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Binary packages built by this source

estscan: ORF-independent detector of coding DNA sequences

 ESTScan is a program that can detect coding regions in DNA sequences,
 even if they are of low quality. ESTScan will also detect and correct
 sequencing errors that lead to frameshifts. ESTScan is not a gene
 prediction program , nor is it an open reading frame detector. In fact,
 its strength lies in the fact that it does not require an open reading
 frame to detect a coding region. As a result, the program may miss a
 few translated amino acids at either the N or the C terminus, but will
 detect coding regions with high selectivity and sensitivity.
 ESTScan takes advantages of the bias in hexanucleotide usage found in
 coding regions relative to non-coding regions. This bias is formalized
 as an inhomogeneous 3-periodic fifth-order Hidden Markov Model
 (HMM). Additionally, the HMM of ESTScan has been extended to allows
 insertions and deletions when these improve the coding region statistics.

estscan-dbgsym: debug symbols for estscan