Ubuntu
epcr package

epcr 2.3.12-1-9 source package in Ubuntu

Changelog

epcr (2.3.12-1-9) unstable; urgency=medium

  * Standards-Version: 4.5.1 (routine-update)
  * debhelper-compat 13 (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Trim trailing whitespace.
  * Fix day-of-week for changelog entries 1.2.0-3, 1.2.0-2.

 -- Andreas Tille <email address hidden>  Mon, 07 Dec 2020 21:08:43 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe science
Noble release universe science
Mantic release universe science
Lunar release universe science
Jammy release universe science

Downloads

File Size SHA-256 Checksum
epcr_2.3.12-1-9.dsc 2.0 KiB 1a55e577087fd9b548d500669496ff34708afcf7cf285d17d7df1fc0daeecc30
epcr_2.3.12-1.orig.tar.gz 75.0 KiB 92613a09cbba3eab66916488063b56e2a3b50a82e5308b1731b6b90d232b8275
epcr_2.3.12-1-9.debian.tar.xz 54.6 KiB b90159da3b91073b692a6c8040c897d77f238dcbbdbc810744d95adfa340749f

No changes file available.

Binary packages built by this source

ncbi-epcr: Tool to test a DNA sequence for the presence of sequence tagged sites

 Electronic PCR (e-PCR) is computational procedure that is used to identify
 sequence tagged sites(STSs), within DNA sequences. e-PCR looks for potential
 STSs in DNA sequences by searching for subsequences that closely match the
 PCR primers and have the correct order, orientation, and spacing that could
 represent the PCR primers used to generate known STSs.
 .
 The new version of e-PCR implements a fuzzy matching strategy. To reduce
 likelihood that a true STS will be missed due to mismatches, multiple
 discontiguous words may be used instead of a single exact word. Each of this
 word has groups of significant positions separated by 'wildcard' positions
 that are not required to match. In addition, it is also possible to allow
 gaps in the primer alignments.
 .
 The main motivation for implementing reverse searching (called Reverse e-PCR)
 was to make it feasible to search the human genome sequence and other large
 genomes. The new version of e-PCR provides a search mode using a query
 sequence against a sequence database.
 .
 This program is retired upstream and it is suggested to use Primer-Blast
  https://www.ncbi.nlm.nih.gov/tools/primer-blast/
 instead.

ncbi-epcr-dbgsym: debug symbols for ncbi-epcr