RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux lgw01-05 4.4.0-51-generic #72-Ubuntu SMP Thu Nov 24 18:29:54 UTC 2016 x86_64 Buildd toolchain package versions: launchpad-buildd_140 python-lpbuildd_140 sbuild_0.67.0-2ubuntu7 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1 dpkg-dev_1.18.4ubuntu1.1 python-debian_0.1.27ubuntu2 qemu-user-static_1:2.5+dfsg-5ubuntu10.6. Syncing the system clock with the buildd NTP service... 3 Dec 17:15:01 ntpdate[1730]: adjust time server 10.211.37.1 offset 0.000413 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-11514586', '/home/buildd/filecache-default/5ce6418ad8acb4cb980a16cd30f1736d3291c7a9'] Unpacking chroot for build PACKAGEBUILD-11514586 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-11514586'] Mounting chroot for build PACKAGEBUILD-11514586 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-11514586', 'deb http://ftpmaster.internal/ubuntu zesty main universe', 'deb http://ftpmaster.internal/ubuntu zesty-security main universe', 'deb http://ftpmaster.internal/ubuntu zesty-updates main universe', 'deb http://ftpmaster.internal/ubuntu zesty-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-11514586 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-11514586', 'i386'] Updating debian chroot for build PACKAGEBUILD-11514586 Get:1 http://ftpmaster.internal/ubuntu zesty InRelease [253 kB] Get:2 http://ftpmaster.internal/ubuntu zesty-security InRelease [102 kB] Get:3 http://ftpmaster.internal/ubuntu zesty-updates InRelease [102 kB] Get:4 http://ftpmaster.internal/ubuntu zesty-proposed InRelease [102 kB] Get:5 http://ftpmaster.internal/ubuntu zesty/main i386 Packages [1228 kB] Get:6 http://ftpmaster.internal/ubuntu zesty/main Translation-en [584 kB] Get:7 http://ftpmaster.internal/ubuntu zesty/universe i386 Packages [7917 kB] Get:8 http://ftpmaster.internal/ubuntu zesty/universe Translation-en [4600 kB] Get:9 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 Packages [109 kB] Get:10 http://ftpmaster.internal/ubuntu zesty-proposed/main Translation-en [48.5 kB] Get:11 http://ftpmaster.internal/ubuntu zesty-proposed/universe i386 Packages [556 kB] Get:12 http://ftpmaster.internal/ubuntu zesty-proposed/universe Translation-en [269 kB] Fetched 15.9 MB in 10s (1555 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.22 perl-modules-5.22 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libperl5.24 perl-modules-5.24 The following packages will be upgraded: adduser apt apt-transport-https base-files base-passwd bash binutils bsdutils ca-certificates cpp cpp-6 debianutils diffutils dmsetup findutils g++ g++-6 gcc gcc-6 gcc-6-base grep init init-system-helpers libapparmor1 libapt-pkg5.0 libasan3 libasn1-8-heimdal libassuan0 libatomic1 libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcc1-0 libcilkrts5 libcurl3-gnutls libdevmapper1.02.1 libfdisk1 libgcc-6-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libgpg-error0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libitm1 libk5crypto3 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libksba8 libldap-2.4-2 liblzma5 libmount1 libmpx2 libnettle6 libnpth0 libpng16-16 libquadmath0 libroken18-heimdal libsasl2-2 libsasl2-modules-db libselinux1 libsemanage-common libsemanage1 libsepol1 libslang2 libsmartcols1 libsqlite3-0 libssl1.0.0 libstdc++-6-dev libstdc++6 libsystemd0 libubsan0 libudev1 libustr-1.0-1 libuuid1 libwind0-heimdal linux-libc-dev mount multiarch-support openssl perl perl-base pinentry-curses pkg-create-dbgsym systemd systemd-sysv tar tzdata ubuntu-keyring util-linux xz-utils 100 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 58.0 MB of archives. After this operation, 35.3 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu zesty/main i386 base-files i386 9.6ubuntu7 [56.6 kB] Get:2 http://ftpmaster.internal/ubuntu zesty/main i386 debianutils i386 4.8.1 [85.8 kB] Get:3 http://ftpmaster.internal/ubuntu zesty/main i386 bash i386 4.4-2ubuntu1 [622 kB] Get:4 http://ftpmaster.internal/ubuntu zesty/main i386 bsdutils i386 1:2.29-1ubuntu2 [58.4 kB] Get:5 http://ftpmaster.internal/ubuntu zesty/main i386 diffutils i386 1:3.5-1 [167 kB] Get:6 http://ftpmaster.internal/ubuntu zesty/main i386 findutils i386 4.6.0+git+20161106-1 [291 kB] Get:7 http://ftpmaster.internal/ubuntu zesty/main i386 grep i386 2.26-1 [158 kB] Get:8 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libc6-dev i386 2.24-7ubuntu1 [1870 kB] Get:9 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libc-dev-bin i386 2.24-7ubuntu1 [66.6 kB] Get:10 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 linux-libc-dev i386 4.9.0-6.7 [864 kB] Get:11 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libitm1 i386 6.2.1-5ubuntu2 [31.2 kB] Get:12 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 gcc-6-base i386 6.2.1-5ubuntu2 [17.1 kB] Get:13 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libgcc1 i386 1:6.2.1-5ubuntu2 [48.1 kB] Get:14 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libcc1-0 i386 6.2.1-5ubuntu2 [33.0 kB] Get:15 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 binutils i386 2.27.51.20161202-0ubuntu1 [2515 kB] Get:16 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libgomp1 i386 6.2.1-5ubuntu2 [80.0 kB] Get:17 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libatomic1 i386 6.2.1-5ubuntu2 [9936 B] Get:18 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libasan3 i386 6.2.1-5ubuntu2 [308 kB] Get:19 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libubsan0 i386 6.2.1-5ubuntu2 [121 kB] Get:20 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libcilkrts5 i386 6.2.1-5ubuntu2 [45.7 kB] Get:21 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libmpx2 i386 6.2.1-5ubuntu2 [12.8 kB] Get:22 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libquadmath0 i386 6.2.1-5ubuntu2 [205 kB] Get:23 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 g++-6 i386 6.2.1-5ubuntu2 [7623 kB] Get:24 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libstdc++-6-dev i386 6.2.1-5ubuntu2 [1467 kB] Get:25 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libgcc-6-dev i386 6.2.1-5ubuntu2 [2312 kB] Get:26 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 gcc-6 i386 6.2.1-5ubuntu2 [7371 kB] Get:27 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 cpp-6 i386 6.2.1-5ubuntu2 [6826 kB] Get:28 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libstdc++6 i386 6.2.1-5ubuntu2 [434 kB] Get:29 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libc6 i386 2.24-7ubuntu1 [2278 kB] Get:30 http://ftpmaster.internal/ubuntu zesty/main i386 libuuid1 i386 2.29-1ubuntu2 [15.7 kB] Get:31 http://ftpmaster.internal/ubuntu zesty/main i386 libblkid1 i386 2.29-1ubuntu2 [125 kB] Get:32 http://ftpmaster.internal/ubuntu zesty/main i386 libfdisk1 i386 2.29-1ubuntu2 [161 kB] Get:33 http://ftpmaster.internal/ubuntu zesty/main i386 libselinux1 i386 2.6-3 [73.3 kB] Get:34 http://ftpmaster.internal/ubuntu zesty/main i386 util-linux i386 2.29-1ubuntu2 [927 kB] Get:35 http://ftpmaster.internal/ubuntu zesty/main i386 mount i386 2.29-1ubuntu2 [136 kB] Get:36 http://ftpmaster.internal/ubuntu zesty/main i386 perl-modules-5.24 all 5.24.1~rc4-1 [2663 kB] Get:37 http://ftpmaster.internal/ubuntu zesty/main i386 libperl5.24 i386 5.24.1~rc4-1 [3081 kB] Get:38 http://ftpmaster.internal/ubuntu zesty/main i386 perl i386 5.24.1~rc4-1 [219 kB] Get:39 http://ftpmaster.internal/ubuntu zesty/main i386 perl-base i386 5.24.1~rc4-1 [1408 kB] Get:40 http://ftpmaster.internal/ubuntu zesty/main i386 tar i386 1.29b-1.1 [236 kB] Get:41 http://ftpmaster.internal/ubuntu zesty/main i386 base-passwd i386 3.5.42 [49.1 kB] Get:42 http://ftpmaster.internal/ubuntu zesty/main i386 init-system-helpers all 1.46 [37.3 kB] Get:43 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libc-bin i386 2.24-7ubuntu1 [591 kB] Get:44 http://ftpmaster.internal/ubuntu zesty/main i386 liblzma5 i386 5.2.2-1.2 [98.7 kB] Get:45 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libapt-pkg5.0 i386 1.4~beta1 [846 kB] Get:46 http://ftpmaster.internal/ubuntu zesty/main i386 adduser all 3.113+nmu3ubuntu5 [161 kB] Get:47 http://ftpmaster.internal/ubuntu zesty/main i386 ubuntu-keyring all 2016.10.27 [16.6 kB] Get:48 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 apt i386 1.4~beta1 [1103 kB] Get:49 http://ftpmaster.internal/ubuntu zesty/main i386 libapparmor1 i386 2.10.95-4ubuntu5.2 [31.6 kB] Get:50 http://ftpmaster.internal/ubuntu zesty/main i386 libgpg-error0 i386 1.25-1 [37.3 kB] Get:51 http://ftpmaster.internal/ubuntu zesty/main i386 libgcrypt20 i386 1.7.3-2 [372 kB] Get:52 http://ftpmaster.internal/ubuntu zesty/main i386 libmount1 i386 2.29-1ubuntu2 [130 kB] Get:53 http://ftpmaster.internal/ubuntu zesty/main i386 systemd i386 232-7 [2406 kB] Get:54 http://ftpmaster.internal/ubuntu zesty/main i386 libsystemd0 i386 232-7 [228 kB] Get:55 http://ftpmaster.internal/ubuntu zesty/main i386 init i386 1.46 [5318 B] Get:56 http://ftpmaster.internal/ubuntu zesty/main i386 systemd-sysv i386 232-7 [13.9 kB] Get:57 http://ftpmaster.internal/ubuntu zesty/main i386 libsepol1 i386 2.6-1 [240 kB] Get:58 http://ftpmaster.internal/ubuntu zesty/main i386 libustr-1.0-1 i386 1.0.4-6 [63.7 kB] Get:59 http://ftpmaster.internal/ubuntu zesty/main i386 libsemanage-common all 2.6-1 [6832 B] Get:60 http://ftpmaster.internal/ubuntu zesty/main i386 libsemanage1 i386 2.6-1 [89.9 kB] Get:61 http://ftpmaster.internal/ubuntu zesty/main i386 libsmartcols1 i386 2.29-1ubuntu2 [75.9 kB] Get:62 http://ftpmaster.internal/ubuntu zesty/main i386 libudev1 i386 232-7 [60.3 kB] Get:63 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 multiarch-support i386 2.24-7ubuntu1 [6824 B] Get:64 http://ftpmaster.internal/ubuntu zesty/main i386 tzdata all 2016j-2 [204 kB] Get:65 http://ftpmaster.internal/ubuntu zesty/main i386 libdevmapper1.02.1 i386 2:1.02.136-1ubuntu1 [146 kB] Get:66 http://ftpmaster.internal/ubuntu zesty/main i386 dmsetup i386 2:1.02.136-1ubuntu1 [72.9 kB] Get:67 http://ftpmaster.internal/ubuntu zesty/main i386 libroken18-heimdal i386 1.7~git20160703+dfsg-1ubuntu1 [44.4 kB] Get:68 http://ftpmaster.internal/ubuntu zesty/main i386 libasn1-8-heimdal i386 1.7~git20160703+dfsg-1ubuntu1 [187 kB] Get:69 http://ftpmaster.internal/ubuntu zesty/main i386 libassuan0 i386 2.4.3-2 [36.6 kB] Get:70 http://ftpmaster.internal/ubuntu zesty/main i386 libhogweed4 i386 3.3-1 [137 kB] Get:71 http://ftpmaster.internal/ubuntu zesty/main i386 libnettle6 i386 3.3-1 [109 kB] Get:72 http://ftpmaster.internal/ubuntu zesty/main i386 libgnutls30 i386 3.5.6-4ubuntu2 [642 kB] Get:73 http://ftpmaster.internal/ubuntu zesty/main i386 libheimbase1-heimdal i386 1.7~git20160703+dfsg-1ubuntu1 [32.1 kB] Get:74 http://ftpmaster.internal/ubuntu zesty/main i386 libhcrypto4-heimdal i386 1.7~git20160703+dfsg-1ubuntu1 [93.1 kB] Get:75 http://ftpmaster.internal/ubuntu zesty/main i386 libwind0-heimdal i386 1.7~git20160703+dfsg-1ubuntu1 [48.4 kB] Get:76 http://ftpmaster.internal/ubuntu zesty/main i386 libhx509-5-heimdal i386 1.7~git20160703+dfsg-1ubuntu1 [118 kB] Get:77 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libsqlite3-0 i386 3.15.2-1 [517 kB] Get:78 http://ftpmaster.internal/ubuntu zesty/main i386 libkrb5-26-heimdal i386 1.7~git20160703+dfsg-1ubuntu1 [227 kB] Get:79 http://ftpmaster.internal/ubuntu zesty/main i386 libheimntlm0-heimdal i386 1.7~git20160703+dfsg-1ubuntu1 [16.6 kB] Get:80 http://ftpmaster.internal/ubuntu zesty/main i386 libgssapi3-heimdal i386 1.7~git20160703+dfsg-1ubuntu1 [108 kB] Get:81 http://ftpmaster.internal/ubuntu zesty/main i386 libksba8 i386 1.3.5-2 [99.9 kB] Get:82 http://ftpmaster.internal/ubuntu zesty/main i386 libsasl2-modules-db i386 2.1.27~72-g88d82a3+dfsg-1 [16.0 kB] Get:83 http://ftpmaster.internal/ubuntu zesty/main i386 libsasl2-2 i386 2.1.27~72-g88d82a3+dfsg-1 [52.3 kB] Get:84 http://ftpmaster.internal/ubuntu zesty/main i386 libldap-2.4-2 i386 2.4.42+dfsg-2ubuntu5 [173 kB] Get:85 http://ftpmaster.internal/ubuntu zesty/main i386 libnpth0 i386 1.3-1 [8414 B] Get:86 http://ftpmaster.internal/ubuntu zesty/main i386 libslang2 i386 2.3.1-5ubuntu1 [423 kB] Get:87 http://ftpmaster.internal/ubuntu zesty/main i386 libssl1.0.0 i386 1.0.2g-1ubuntu10 [910 kB] Get:88 http://ftpmaster.internal/ubuntu zesty/main i386 pinentry-curses i386 0.9.7-9 [32.8 kB] Get:89 http://ftpmaster.internal/ubuntu zesty/main i386 xz-utils i386 5.2.2-1.2 [86.3 kB] Get:90 http://ftpmaster.internal/ubuntu zesty/main i386 libgssapi-krb5-2 i386 1.15~beta1-1 [129 kB] Get:91 http://ftpmaster.internal/ubuntu zesty/main i386 libkrb5-3 i386 1.15~beta1-1 [299 kB] Get:92 http://ftpmaster.internal/ubuntu zesty/main i386 libkrb5support0 i386 1.15~beta1-1 [33.7 kB] Get:93 http://ftpmaster.internal/ubuntu zesty/main i386 libk5crypto3 i386 1.15~beta1-1 [87.4 kB] Get:94 http://ftpmaster.internal/ubuntu zesty/main i386 libcurl3-gnutls i386 7.51.0-1ubuntu1 [210 kB] Get:95 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 apt-transport-https i386 1.4~beta1 [38.1 kB] Get:96 http://ftpmaster.internal/ubuntu zesty/main i386 openssl i386 1.0.2g-1ubuntu10 [506 kB] Get:97 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 ca-certificates all 20161102 [194 kB] Get:98 http://ftpmaster.internal/ubuntu zesty/main i386 libpng16-16 i386 1.6.26-2ubuntu1 [181 kB] Get:99 http://ftpmaster.internal/ubuntu zesty/main i386 cpp i386 4:6.2.1-1ubuntu1 [27.4 kB] Get:100 http://ftpmaster.internal/ubuntu zesty/main i386 gcc i386 4:6.2.1-1ubuntu1 [5206 B] Get:101 http://ftpmaster.internal/ubuntu zesty/main i386 g++ i386 4:6.2.1-1ubuntu1 [1486 B] Get:102 http://ftpmaster.internal/ubuntu zesty/main i386 pkg-create-dbgsym all 0.73 [8952 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 58.0 MB in 16s (3614 kB/s) (Reading database ... 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Installing new version of config file /etc/systemd/system.conf ... addgroup: The group `systemd-journal' already exists as a system group. Exiting. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14113 files and directories currently installed.) Preparing to unpack .../0-systemd-sysv_232-7_i386.deb ... Unpacking systemd-sysv (232-7) over (231-9git1) ... Preparing to unpack .../1-libsepol1_2.6-1_i386.deb ... Unpacking libsepol1:i386 (2.6-1) over (2.5-1) ... 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Unpacking ca-certificates (20161102) over (20160104ubuntu1) ... Preparing to unpack .../34-libpng16-16_1.6.26-2ubuntu1_i386.deb ... Unpacking libpng16-16:i386 (1.6.26-2ubuntu1) over (1.6.25-1) ... Preparing to unpack .../35-cpp_4%3a6.2.1-1ubuntu1_i386.deb ... Unpacking cpp (4:6.2.1-1ubuntu1) over (4:6.1.1-1ubuntu2) ... Preparing to unpack .../36-gcc_4%3a6.2.1-1ubuntu1_i386.deb ... Removing old gcc doc directory. Unpacking gcc (4:6.2.1-1ubuntu1) over (4:6.1.1-1ubuntu2) ... Preparing to unpack .../37-g++_4%3a6.2.1-1ubuntu1_i386.deb ... Unpacking g++ (4:6.2.1-1ubuntu1) over (4:6.1.1-1ubuntu2) ... Preparing to unpack .../38-pkg-create-dbgsym_0.73_all.deb ... Unpacking pkg-create-dbgsym (0.73) over (0.72) ... Setting up libquadmath0:i386 (6.2.1-5ubuntu2) ... Setting up libnpth0:i386 (1.3-1) ... Setting up libgomp1:i386 (6.2.1-5ubuntu2) ... Setting up libatomic1:i386 (6.2.1-5ubuntu2) ... Setting up perl-modules-5.24 (5.24.1~rc4-1) ... Setting up libperl5.24:i386 (5.24.1~rc4-1) ... Setting up libnettle6:i386 (3.3-1) ... Setting up libcc1-0:i386 (6.2.1-5ubuntu2) ... Setting up libasan3:i386 (6.2.1-5ubuntu2) ... Setting up libssl1.0.0:i386 (1.0.2g-1ubuntu10) ... Setting up libpng16-16:i386 (1.6.26-2ubuntu1) ... Setting up libcilkrts5:i386 (6.2.1-5ubuntu2) ... Setting up tzdata (2016j-2) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Dec 3 17:17:22 UTC 2016. Universal Time is now: Sat Dec 3 17:17:22 UTC 2016. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up systemd-sysv (232-7) ... Setting up libubsan0:i386 (6.2.1-5ubuntu2) ... Setting up libsasl2-modules-db:i386 (2.1.27~72-g88d82a3+dfsg-1) ... Setting up linux-libc-dev:i386 (4.9.0-6.7) ... Setting up libsasl2-2:i386 (2.1.27~72-g88d82a3+dfsg-1) ... Setting up libroken18-heimdal:i386 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libksba8:i386 (1.3.5-2) ... Setting up libdevmapper1.02.1:i386 (2:1.02.136-1ubuntu1) ... Setting up libkrb5support0:i386 (1.15~beta1-1) ... Setting up libhogweed4:i386 (3.3-1) ... Setting up perl (5.24.1~rc4-1) ... Installing new version of config file /etc/perl/sitecustomize.pl ... Setting up libmpx2:i386 (6.2.1-5ubuntu2) ... Processing triggers for libc-bin (2.24-7ubuntu1) ... Setting up pkg-create-dbgsym (0.73) ... Setting up xz-utils (5.2.2-1.2) ... Setting up libheimbase1-heimdal:i386 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up openssl (1.0.2g-1ubuntu10) ... Setting up libsqlite3-0:i386 (3.15.2-1) ... Setting up dmsetup (2:1.02.136-1ubuntu1) ... Setting up binutils (2.27.51.20161202-0ubuntu1) ... Setting up cpp-6 (6.2.1-5ubuntu2) ... Setting up libc-dev-bin (2.24-7ubuntu1) ... Setting up ca-certificates (20161102) ... Updating certificates in /etc/ssl/certs... 10 added, 10 removed; done. Setting up libc6-dev:i386 (2.24-7ubuntu1) ... Setting up libslang2:i386 (2.3.1-5ubuntu1) ... Setting up libassuan0:i386 (2.4.3-2) ... Setting up libitm1:i386 (6.2.1-5ubuntu2) ... Setting up cpp (4:6.2.1-1ubuntu1) ... Setting up libk5crypto3:i386 (1.15~beta1-1) ... Setting up libgcc-6-dev:i386 (6.2.1-5ubuntu2) ... Setting up libstdc++-6-dev:i386 (6.2.1-5ubuntu2) ... Setting up libwind0-heimdal:i386 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up init (1.46) ... Setting up libasn1-8-heimdal:i386 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libhcrypto4-heimdal:i386 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libgnutls30:i386 (3.5.6-4ubuntu2) ... Setting up libhx509-5-heimdal:i386 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up gcc-6 (6.2.1-5ubuntu2) ... Setting up g++-6 (6.2.1-5ubuntu2) ... Setting up pinentry-curses (0.9.7-9) ... Setting up libkrb5-3:i386 (1.15~beta1-1) ... Setting up libkrb5-26-heimdal:i386 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libheimntlm0-heimdal:i386 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up gcc (4:6.2.1-1ubuntu1) ... Setting up libgssapi-krb5-2:i386 (1.15~beta1-1) ... Setting up g++ (4:6.2.1-1ubuntu1) ... Setting up libgssapi3-heimdal:i386 (1.7~git20160703+dfsg-1ubuntu1) ... Setting up libldap-2.4-2:i386 (2.4.42+dfsg-2ubuntu5) ... Setting up libcurl3-gnutls:i386 (7.51.0-1ubuntu1) ... Setting up apt-transport-https (1.4~beta1) ... Processing triggers for libc-bin (2.24-7ubuntu1) ... Processing triggers for ca-certificates (20161102) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-11514586', 'i386', 'zesty-proposed', '-c', 'chroot:autobuild', '--arch=i386', '--dist=zesty-proposed', '--purge=never', '--nolog', 'emboss_6.6.0+dfsg-6.dsc'] Initiating build PACKAGEBUILD-11514586 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-51-generic #72-Ubuntu SMP Thu Nov 24 18:29:54 UTC 2016 i686 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-05.buildd +==============================================================================+ | emboss 6.6.0+dfsg-6 (i386) 03 Dec 2016 17:18 | +==============================================================================+ Package: emboss Version: 6.6.0+dfsg-6 Source Version: 6.6.0+dfsg-6 Distribution: zesty-proposed Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 I: NOTICE: Log filtering will replace 'build/emboss-Vtv_OH/emboss-6.6.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/emboss-Vtv_OH' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-11514586/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- emboss_6.6.0+dfsg-6.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-PTpMgk/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-PTpMgk/apt_archive ./ InRelease Get:2 copy:/<>/resolver-PTpMgk/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-PTpMgk/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-PTpMgk/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-PTpMgk/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (53.2 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.22 perl-modules-5.22 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 768 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-PTpMgk/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [768 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 768 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 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Merged Build-Depends: debhelper (>= 10), libx11-dev, x11proto-core-dev, libgdchart-gd2-xpm-dev, zlib1g-dev, libpng-dev, libexpat1-dev, libhpdf-dev, default-libmysqlclient-dev, libpq-dev, antiword, sharutils, autotools-dev, tcsh | csh | c-shell, dh-autoreconf, default-jdk, ant Filtered Build-Depends: debhelper (>= 10), libx11-dev, x11proto-core-dev, libgdchart-gd2-xpm-dev, zlib1g-dev, libpng-dev, libexpat1-dev, libhpdf-dev, default-libmysqlclient-dev, libpq-dev, antiword, sharutils, autotools-dev, tcsh | csh | c-shell, dh-autoreconf, default-jdk, ant dpkg-deb: building package 'sbuild-build-depends-emboss-dummy' in '/<>/resolver-2QJYzc/apt_archive/sbuild-build-depends-emboss-dummy.deb'. Ign:1 copy:/<>/resolver-2QJYzc/apt_archive ./ InRelease Get:2 copy:/<>/resolver-2QJYzc/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-2QJYzc/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-2QJYzc/apt_archive ./ Sources [325 B] Get:5 copy:/<>/resolver-2QJYzc/apt_archive ./ Packages [648 B] Fetched 3092 B in 0s (38.6 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install emboss build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.22 perl-modules-5.22 Use 'sudo apt autoremove' to remove them. The following additional packages will be installed: adwaita-icon-theme ant antiword autoconf automake autopoint autotools-dev bsdmainutils ca-certificates-java comerr-dev debhelper default-jdk default-jdk-headless default-jre default-jre-headless default-libmysqlclient-dev dh-autoreconf dh-strip-nondeterminism file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme intltool-debian java-common krb5-multidev libarchive-zip-perl libasound2 libasound2-data libasyncns0 libatk-bridge2.0-0 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libbsd0 libcairo2 libcroco3 libcups2 libdatrie1 libdbus-1-3 libdrm-amdgpu1 libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libflac8 libfontconfig1 libfontconfig1-dev libfontenc1 libfreetype6 libfreetype6-dev libgd-dev libgd3 libgdchart-gd2-xpm libgdchart-gd2-xpm-dev libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgraphite2-3 libgssrpc4 libgtk2.0-0 libgtk2.0-common libharfbuzz0b libhpdf-2.2.1 libhpdf-dev libice-dev libice6 libicu57 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjson-c3 libkadm5clnt-mit11 libkadm5srv-mit11 libkdb5-8 liblcms2-2 libllvm3.9 liblzma-dev libmagic-mgc libmagic1 libmysqlclient-dev libmysqlclient20 libnspr4 libnss3 libogg0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libpng-dev libpq-dev libpq5 libpthread-stubs0-dev libpulse0 librsvg2-2 librsvg2-common libsensors4 libsigsegv2 libsm-dev libsm6 libsndfile1 libssl-dev libthai-data libthai0 libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libunistring0 libvorbis0a libvorbisenc2 libvpx-dev libvpx4 libwebp6 libwrap0 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxmuu1 libxpm-dev libxpm4 libxrandr2 libxrender1 libxshmfence1 libxt-dev libxt6 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 m4 man-db mysql-common openjdk-8-jdk openjdk-8-jdk-headless openjdk-8-jre openjdk-8-jre-headless pkg-config po-debconf shared-mime-info sharutils tcsh ubuntu-mono ucf x11-common x11-utils x11proto-core-dev x11proto-input-dev x11proto-kb-dev xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: ant-doc ant-gcj autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation doc-base dh-make default-java-plugin gettext-doc libasprintf-dev libgettextpo-dev groff krb5-doc libasound2-plugins alsa-utils cups-common libgd-tools krb5-user gvfs libice-doc liblcms2-utils liblzma-doc pciutils pcscd postgresql-doc-9.5 pulseaudio librsvg2-bin lm-sensors libsm-doc libtool-doc gfortran | fortran95-compiler gcj-jdk libxcb-doc libxt-doc less www-browser openjdk-8-demo openjdk-8-source visualvm icedtea-8-plugin openjdk-8-jre-jamvm libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho ttf-wqy-microhei | ttf-wqy-zenhei fonts-indic libmail-box-perl bsd-mailx | mailx mesa-utils Recommended packages: ant-optional curl | wget | lynx-cur at-spi2-core dbus libtxc-dxtn-s2tc | libtxc-dxtn-s2tc0 | libtxc-dxtn0 libglib2.0-data xdg-user-dirs libgail-common libgtk2.0-bin libpng-tools libssl-doc libltdl-dev tcpd libx11-doc xml-core libgnome-2-0 libgnomevfs2-0 libgconf-2-4 fonts-dejavu-extra libmail-sendmail-perl The following NEW packages will be installed: adwaita-icon-theme ant antiword autoconf automake autopoint autotools-dev bsdmainutils ca-certificates-java comerr-dev debhelper default-jdk default-jdk-headless default-jre default-jre-headless default-libmysqlclient-dev dh-autoreconf dh-strip-nondeterminism file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme intltool-debian java-common krb5-multidev libarchive-zip-perl libasound2 libasound2-data libasyncns0 libatk-bridge2.0-0 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libbsd0 libcairo2 libcroco3 libcups2 libdatrie1 libdbus-1-3 libdrm-amdgpu1 libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libflac8 libfontconfig1 libfontconfig1-dev libfontenc1 libfreetype6 libfreetype6-dev libgd-dev libgd3 libgdchart-gd2-xpm libgdchart-gd2-xpm-dev libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgraphite2-3 libgssrpc4 libgtk2.0-0 libgtk2.0-common libharfbuzz0b libhpdf-2.2.1 libhpdf-dev libice-dev libice6 libicu57 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjson-c3 libkadm5clnt-mit11 libkadm5srv-mit11 libkdb5-8 liblcms2-2 libllvm3.9 liblzma-dev libmagic-mgc libmagic1 libmysqlclient-dev libmysqlclient20 libnspr4 libnss3 libogg0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libpng-dev libpq-dev libpq5 libpthread-stubs0-dev libpulse0 librsvg2-2 librsvg2-common libsensors4 libsigsegv2 libsm-dev libsm6 libsndfile1 libssl-dev libthai-data libthai0 libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libunistring0 libvorbis0a libvorbisenc2 libvpx-dev libvpx4 libwebp6 libwrap0 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxmuu1 libxpm-dev libxpm4 libxrandr2 libxrender1 libxshmfence1 libxt-dev libxt6 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 m4 man-db mysql-common openjdk-8-jdk openjdk-8-jdk-headless openjdk-8-jre openjdk-8-jre-headless pkg-config po-debconf sbuild-build-depends-emboss-dummy shared-mime-info sharutils tcsh ubuntu-mono ucf x11-common x11-utils x11proto-core-dev x11proto-input-dev x11proto-kb-dev xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 206 newly installed, 0 to remove and 0 not upgraded. Need to get 105 MB of archives. After this operation, 512 MB of additional disk space will be used. Get:1 copy:/<>/resolver-2QJYzc/apt_archive ./ sbuild-build-depends-emboss-dummy 0.invalid.0 [894 B] Get:2 http://ftpmaster.internal/ubuntu zesty/main i386 libxau6 i386 1:1.0.8-1 [8352 B] Get:3 http://ftpmaster.internal/ubuntu zesty/main i386 libxdmcp6 i386 1:1.1.2-1.1 [11.4 kB] Get:4 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb1 i386 1.11.1-1ubuntu1 [44.1 kB] Get:5 http://ftpmaster.internal/ubuntu zesty/main i386 libx11-data all 2:1.6.3-1ubuntu3 [113 kB] Get:6 http://ftpmaster.internal/ubuntu zesty/main i386 libx11-6 i386 2:1.6.3-1ubuntu3 [593 kB] Get:7 http://ftpmaster.internal/ubuntu zesty/main i386 libxext6 i386 2:1.3.3-1 [31.6 kB] Get:8 http://ftpmaster.internal/ubuntu zesty/main i386 groff-base i386 1.22.3-8 [1150 kB] Get:9 http://ftpmaster.internal/ubuntu zesty/main i386 libbsd0 i386 0.8.3-1 [44.9 kB] Get:10 http://ftpmaster.internal/ubuntu zesty/main i386 bsdmainutils i386 9.0.12ubuntu1 [175 kB] Get:11 http://ftpmaster.internal/ubuntu zesty/main i386 libpipeline1 i386 1.4.1-2 [26.5 kB] Get:12 http://ftpmaster.internal/ubuntu zesty/main i386 man-db i386 2.7.5-2 [867 kB] Get:13 http://ftpmaster.internal/ubuntu zesty/main i386 fonts-dejavu-core all 2.37-1 [1041 kB] Get:14 http://ftpmaster.internal/ubuntu zesty/main i386 ucf all 3.0036 [52.9 kB] Get:15 http://ftpmaster.internal/ubuntu zesty/main i386 fontconfig-config all 2.11.94-0ubuntu2 [49.9 kB] Get:16 http://ftpmaster.internal/ubuntu zesty/main i386 libexpat1 i386 2.2.0-1 [74.9 kB] Get:17 http://ftpmaster.internal/ubuntu zesty/main i386 libfreetype6 i386 2.6.3-3ubuntu1 [335 kB] Get:18 http://ftpmaster.internal/ubuntu zesty/main i386 libfontconfig1 i386 2.11.94-0ubuntu2 [140 kB] Get:19 http://ftpmaster.internal/ubuntu zesty/main i386 fontconfig i386 2.11.94-0ubuntu2 [177 kB] Get:20 http://ftpmaster.internal/ubuntu zesty/main i386 x11-common all 1:7.7+16ubuntu2 [21.9 kB] Get:21 http://ftpmaster.internal/ubuntu zesty/main i386 libice6 i386 2:1.0.9-1 [38.2 kB] Get:22 http://ftpmaster.internal/ubuntu zesty/main i386 libjpeg-turbo8 i386 1.5.1-0ubuntu1 [120 kB] Get:23 http://ftpmaster.internal/ubuntu zesty/main i386 libogg0 i386 1.3.2-1 [16.2 kB] Get:24 http://ftpmaster.internal/ubuntu zesty/main i386 libsm6 i386 2:1.2.2-1 [14.8 kB] Get:25 http://ftpmaster.internal/ubuntu zesty/main i386 libunistring0 i386 0.9.3-5.2ubuntu1 [277 kB] Get:26 http://ftpmaster.internal/ubuntu zesty/main i386 libwrap0 i386 7.6.q-25 [45.8 kB] Get:27 http://ftpmaster.internal/ubuntu zesty/main i386 libxcomposite1 i386 1:0.4.4-1 [7594 B] Get:28 http://ftpmaster.internal/ubuntu zesty/main i386 libxfixes3 i386 1:5.0.2-1 [11.0 kB] Get:29 http://ftpmaster.internal/ubuntu zesty/main i386 libxrender1 i386 1:0.9.9-2 [19.3 kB] Get:30 http://ftpmaster.internal/ubuntu zesty/main i386 libxcursor1 i386 1:1.1.14-1 [22.8 kB] Get:31 http://ftpmaster.internal/ubuntu zesty/main i386 libxdamage1 i386 1:1.1.4-2 [6812 B] Get:32 http://ftpmaster.internal/ubuntu zesty/main i386 libxft2 i386 2.3.2-1 [35.5 kB] Get:33 http://ftpmaster.internal/ubuntu zesty/main i386 libxinerama1 i386 2:1.1.3-1 [7900 B] Get:34 http://ftpmaster.internal/ubuntu zesty/main i386 libxpm4 i386 1:3.5.11-1 [32.1 kB] Get:35 http://ftpmaster.internal/ubuntu zesty/main i386 libxshmfence1 i386 1.2-1 [5164 B] Get:36 http://ftpmaster.internal/ubuntu zesty/main i386 libxtst6 i386 2:1.2.2-1 [13.8 kB] Get:37 http://ftpmaster.internal/ubuntu zesty/main i386 libxv1 i386 2:1.0.10-1 [10.2 kB] Get:38 http://ftpmaster.internal/ubuntu zesty/main i386 libxxf86dga1 i386 2:1.1.4-1 [13.3 kB] Get:39 http://ftpmaster.internal/ubuntu zesty/main i386 libxxf86vm1 i386 1:1.1.4-1 [11.3 kB] Get:40 http://ftpmaster.internal/ubuntu zesty/main i386 java-common all 0.57ubuntu1 [7492 B] Get:41 http://ftpmaster.internal/ubuntu zesty/main i386 default-jre-headless i386 2:1.8-57ubuntu1 [4120 B] Get:42 http://ftpmaster.internal/ubuntu zesty/main i386 libnspr4 i386 2:4.12-2ubuntu1 [121 kB] Get:43 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libnss3 i386 2:3.26.2-1ubuntu1 [1211 kB] Get:44 http://ftpmaster.internal/ubuntu zesty/main i386 ca-certificates-java all 20161107 [12.6 kB] Get:45 http://ftpmaster.internal/ubuntu zesty/main i386 libavahi-common-data i386 0.6.32-1ubuntu1 [22.0 kB] Get:46 http://ftpmaster.internal/ubuntu zesty/main i386 libavahi-common3 i386 0.6.32-1ubuntu1 [23.5 kB] Get:47 http://ftpmaster.internal/ubuntu zesty/main i386 libdbus-1-3 i386 1.10.10-1ubuntu2 [175 kB] Get:48 http://ftpmaster.internal/ubuntu zesty/main i386 libavahi-client3 i386 0.6.32-1ubuntu1 [27.1 kB] Get:49 http://ftpmaster.internal/ubuntu zesty/main i386 libcups2 i386 2.2.1-2 [218 kB] Get:50 http://ftpmaster.internal/ubuntu zesty/main i386 liblcms2-2 i386 2.7-1ubuntu1 [148 kB] Get:51 http://ftpmaster.internal/ubuntu zesty/main i386 libjpeg8 i386 8c-2ubuntu8 [2188 B] Get:52 http://ftpmaster.internal/ubuntu zesty/main i386 libpcsclite1 i386 1.8.14-1ubuntu1 [22.9 kB] Get:53 http://ftpmaster.internal/ubuntu zesty/main i386 libxi6 i386 2:1.7.6-1ubuntu1 [31.3 kB] Get:54 http://ftpmaster.internal/ubuntu zesty/main i386 openjdk-8-jre-headless i386 8u111-b14-3 [27.1 MB] Get:55 http://ftpmaster.internal/ubuntu zesty/main i386 libjbig0 i386 2.1-3.1 [27.0 kB] Get:56 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libmagic-mgc i386 1:5.29-1 [178 kB] Get:57 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libmagic1 i386 1:5.29-1 [74.1 kB] Get:58 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 file i386 1:5.29-1 [21.7 kB] Get:59 http://ftpmaster.internal/ubuntu zesty/main i386 libjson-c3 i386 0.12.1-1ubuntu1 [23.1 kB] Get:60 http://ftpmaster.internal/ubuntu zesty/main i386 gettext-base i386 0.19.8.1-1ubuntu2 [49.0 kB] Get:61 http://ftpmaster.internal/ubuntu zesty/main i386 libdrm2 i386 2.4.74-1 [30.9 kB] Get:62 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libedit2 i386 3.1-20160903-2 [80.3 kB] Get:63 http://ftpmaster.internal/ubuntu zesty/main i386 libelf1 i386 0.166-2ubuntu1 [49.1 kB] Get:64 http://ftpmaster.internal/ubuntu zesty/main i386 libglib2.0-0 i386 2.51.0-2 [1214 kB] Get:65 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libicu57 i386 57.1-5 [7813 kB] Get:66 http://ftpmaster.internal/ubuntu zesty/main i386 libgssrpc4 i386 1.15~beta1-1 [58.3 kB] Get:67 http://ftpmaster.internal/ubuntu zesty/main i386 libkadm5clnt-mit11 i386 1.15~beta1-1 [39.2 kB] Get:68 http://ftpmaster.internal/ubuntu zesty/main i386 libkdb5-8 i386 1.15~beta1-1 [39.6 kB] Get:69 http://ftpmaster.internal/ubuntu zesty/main i386 libkadm5srv-mit11 i386 1.15~beta1-1 [55.3 kB] Get:70 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libxml2 i386 2.9.4+dfsg1-2.1 [733 kB] Get:71 http://ftpmaster.internal/ubuntu zesty/main i386 libxmuu1 i386 2:1.1.2-2 [9988 B] Get:72 http://ftpmaster.internal/ubuntu zesty/main i386 shared-mime-info i386 1.7-1 [417 kB] Get:73 http://ftpmaster.internal/ubuntu zesty/main i386 hicolor-icon-theme all 0.15-1 [8378 B] Get:74 http://ftpmaster.internal/ubuntu zesty/main i386 libtiff5 i386 4.0.7-1 [157 kB] Get:75 http://ftpmaster.internal/ubuntu zesty/main i386 libgdk-pixbuf2.0-common all 2.36.0-1ubuntu1 [4926 B] Get:76 http://ftpmaster.internal/ubuntu zesty/main i386 libgdk-pixbuf2.0-0 i386 2.36.0-1ubuntu1 [173 kB] Get:77 http://ftpmaster.internal/ubuntu zesty/main i386 gtk-update-icon-cache i386 3.22.4-1ubuntu1 [27.6 kB] Get:78 http://ftpmaster.internal/ubuntu zesty/main i386 libpixman-1-0 i386 0.34.0-1 [235 kB] Get:79 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb-render0 i386 1.11.1-1ubuntu1 [12.2 kB] Get:80 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb-shm0 i386 1.11.1-1ubuntu1 [5754 B] Get:81 http://ftpmaster.internal/ubuntu zesty/main i386 libcairo2 i386 1.14.6-1.1 [612 kB] Get:82 http://ftpmaster.internal/ubuntu zesty/main i386 libcroco3 i386 0.6.11-2 [87.1 kB] Get:83 http://ftpmaster.internal/ubuntu zesty/main i386 libthai-data all 0.1.25-2 [131 kB] Get:84 http://ftpmaster.internal/ubuntu zesty/main i386 libdatrie1 i386 0.2.10-4 [18.9 kB] Get:85 http://ftpmaster.internal/ubuntu zesty/main i386 libthai0 i386 0.1.25-2 [18.8 kB] Get:86 http://ftpmaster.internal/ubuntu zesty/main i386 libpango-1.0-0 i386 1.40.3-3 [155 kB] Get:87 http://ftpmaster.internal/ubuntu zesty/main i386 libgraphite2-3 i386 1.3.9-2 [74.1 kB] Get:88 http://ftpmaster.internal/ubuntu zesty/main i386 libharfbuzz0b i386 1.2.7-1 [188 kB] Get:89 http://ftpmaster.internal/ubuntu zesty/main i386 libpangoft2-1.0-0 i386 1.40.3-3 [35.5 kB] Get:90 http://ftpmaster.internal/ubuntu zesty/main i386 libpangocairo-1.0-0 i386 1.40.3-3 [21.9 kB] Get:91 http://ftpmaster.internal/ubuntu zesty/main i386 librsvg2-2 i386 2.40.16-1 [106 kB] Get:92 http://ftpmaster.internal/ubuntu zesty/main i386 librsvg2-common i386 2.40.16-1 [4994 B] Get:93 http://ftpmaster.internal/ubuntu zesty/main i386 humanity-icon-theme all 0.6.11 [1288 kB] Get:94 http://ftpmaster.internal/ubuntu zesty/main i386 ubuntu-mono all 16.10+17.04.20161118-0ubuntu1 [160 kB] Get:95 http://ftpmaster.internal/ubuntu zesty/main i386 adwaita-icon-theme all 3.20-3ubuntu2 [3430 kB] Get:96 http://ftpmaster.internal/ubuntu zesty/universe i386 ant all 1.9.7-3 [1907 kB] Get:97 http://ftpmaster.internal/ubuntu zesty/universe i386 antiword i386 0.37-11 [129 kB] Get:98 http://ftpmaster.internal/ubuntu zesty/main i386 libsigsegv2 i386 2.10-5 [14.3 kB] Get:99 http://ftpmaster.internal/ubuntu zesty/main i386 m4 i386 1.4.17-5 [195 kB] Get:100 http://ftpmaster.internal/ubuntu zesty/main i386 autoconf all 2.69-10 [321 kB] Get:101 http://ftpmaster.internal/ubuntu zesty/main i386 autotools-dev all 20161112.1 [39.5 kB] Get:102 http://ftpmaster.internal/ubuntu zesty/main i386 automake all 1:1.15-5ubuntu1 [509 kB] Get:103 http://ftpmaster.internal/ubuntu zesty/main i386 autopoint all 0.19.8.1-1ubuntu2 [412 kB] Get:104 http://ftpmaster.internal/ubuntu zesty/main i386 libtool all 2.4.6-2 [194 kB] Get:105 http://ftpmaster.internal/ubuntu zesty/main i386 dh-autoreconf all 12 [15.8 kB] Get:106 http://ftpmaster.internal/ubuntu zesty/main i386 libarchive-zip-perl all 1.59-1 [84.0 kB] Get:107 http://ftpmaster.internal/ubuntu zesty/main i386 libfile-stripnondeterminism-perl all 0.028-1 [12.5 kB] Get:108 http://ftpmaster.internal/ubuntu zesty/main i386 libtimedate-perl all 2.3000-2 [37.5 kB] Get:109 http://ftpmaster.internal/ubuntu zesty/main i386 dh-strip-nondeterminism all 0.028-1 [4820 B] Get:110 http://ftpmaster.internal/ubuntu zesty/main i386 gettext i386 0.19.8.1-1ubuntu2 [1086 kB] Get:111 http://ftpmaster.internal/ubuntu zesty/main i386 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:112 http://ftpmaster.internal/ubuntu zesty/main i386 po-debconf all 1.0.20 [232 kB] Get:113 http://ftpmaster.internal/ubuntu zesty/main i386 debhelper all 10.2.2ubuntu1 [742 kB] Get:114 http://ftpmaster.internal/ubuntu zesty/main i386 libgtk2.0-common all 2.24.31-1ubuntu1 [124 kB] Get:115 http://ftpmaster.internal/ubuntu zesty/main i386 libatk1.0-data all 2.22.0-1 [2844 B] Get:116 http://ftpmaster.internal/ubuntu zesty/main i386 libatk1.0-0 i386 2.22.0-1 [43.5 kB] Get:117 http://ftpmaster.internal/ubuntu zesty/main i386 libxrandr2 i386 2:1.5.0-1 [19.1 kB] Get:118 http://ftpmaster.internal/ubuntu zesty/main i386 libgtk2.0-0 i386 2.24.31-1ubuntu1 [1899 kB] Get:119 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libglapi-mesa i386 13.0.2-1ubuntu1 [22.9 kB] Get:120 http://ftpmaster.internal/ubuntu zesty/main i386 libx11-xcb1 i386 2:1.6.3-1ubuntu3 [8846 B] Get:121 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb-dri2-0 i386 1.11.1-1ubuntu1 [7292 B] Get:122 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb-dri3-0 i386 1.11.1-1ubuntu1 [5392 B] Get:123 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb-glx0 i386 1.11.1-1ubuntu1 [22.3 kB] Get:124 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb-present0 i386 1.11.1-1ubuntu1 [5396 B] Get:125 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb-sync1 i386 1.11.1-1ubuntu1 [8702 B] Get:126 http://ftpmaster.internal/ubuntu zesty/main i386 libdrm-amdgpu1 i386 2.4.74-1 [20.5 kB] Get:127 http://ftpmaster.internal/ubuntu zesty/main i386 libpciaccess0 i386 0.13.4-1 [20.3 kB] Get:128 http://ftpmaster.internal/ubuntu zesty/main i386 libdrm-intel1 i386 2.4.74-1 [63.3 kB] Get:129 http://ftpmaster.internal/ubuntu zesty/main i386 libdrm-nouveau2 i386 2.4.74-1 [18.2 kB] Get:130 http://ftpmaster.internal/ubuntu zesty/main i386 libdrm-radeon1 i386 2.4.74-1 [23.0 kB] Get:131 http://ftpmaster.internal/ubuntu zesty/main i386 libllvm3.9 i386 1:3.9-6ubuntu1 [12.5 MB] Get:132 http://ftpmaster.internal/ubuntu zesty/main i386 libsensors4 i386 1:3.4.0-3 [29.1 kB] Get:133 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libgl1-mesa-dri i386 13.0.2-1ubuntu1 [4903 kB] Get:134 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libgl1-mesa-glx i386 13.0.2-1ubuntu1 [137 kB] Get:135 http://ftpmaster.internal/ubuntu zesty/main i386 libatspi2.0-0 i386 2.22.0-3ubuntu1 [61.6 kB] Get:136 http://ftpmaster.internal/ubuntu zesty/main i386 libatk-bridge2.0-0 i386 2.22.0-1ubuntu1 [57.5 kB] Get:137 http://ftpmaster.internal/ubuntu zesty/main i386 libfontenc1 i386 1:1.1.3-1 [14.0 kB] Get:138 http://ftpmaster.internal/ubuntu zesty/main i386 libxt6 i386 1:1.1.5-1 [164 kB] Get:139 http://ftpmaster.internal/ubuntu zesty/main i386 libxmu6 i386 2:1.1.2-2 [48.4 kB] Get:140 http://ftpmaster.internal/ubuntu zesty/main i386 libxaw7 i386 2:1.0.13-1 [182 kB] Get:141 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb-shape0 i386 1.11.1-1ubuntu1 [5944 B] Get:142 http://ftpmaster.internal/ubuntu zesty/main i386 x11-utils i386 7.7+3 [190 kB] Get:143 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libatk-wrapper-java all 0.33.3-11 [34.0 kB] Get:144 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libatk-wrapper-java-jni i386 0.33.3-11 [29.8 kB] Get:145 http://ftpmaster.internal/ubuntu zesty/main i386 libasound2-data all 1.1.2-1 [32.3 kB] Get:146 http://ftpmaster.internal/ubuntu zesty/main i386 libasound2 i386 1.1.2-1 [379 kB] Get:147 http://ftpmaster.internal/ubuntu zesty/main i386 libgif7 i386 5.1.4-0.4 [31.7 kB] Get:148 http://ftpmaster.internal/ubuntu zesty/main i386 libasyncns0 i386 0.8-6 [12.5 kB] Get:149 http://ftpmaster.internal/ubuntu zesty/main i386 libflac8 i386 1.3.1-4 [154 kB] Get:150 http://ftpmaster.internal/ubuntu zesty/main i386 libvorbis0a i386 1.3.5-3 [85.7 kB] Get:151 http://ftpmaster.internal/ubuntu zesty/main i386 libvorbisenc2 i386 1.3.5-3 [64.5 kB] Get:152 http://ftpmaster.internal/ubuntu zesty/main i386 libsndfile1 i386 1.0.27-1 [188 kB] Get:153 http://ftpmaster.internal/ubuntu zesty/main i386 libpulse0 i386 1:9.0-5ubuntu3 [256 kB] Get:154 http://ftpmaster.internal/ubuntu zesty/main i386 openjdk-8-jre i386 8u111-b14-3 [71.1 kB] Get:155 http://ftpmaster.internal/ubuntu zesty/main i386 default-jre i386 2:1.8-57ubuntu1 [980 B] Get:156 http://ftpmaster.internal/ubuntu zesty/main i386 openjdk-8-jdk-headless i386 8u111-b14-3 [8181 kB] Get:157 http://ftpmaster.internal/ubuntu zesty/main i386 default-jdk-headless i386 2:1.8-57ubuntu1 [986 B] Get:158 http://ftpmaster.internal/ubuntu zesty/main i386 openjdk-8-jdk i386 8u111-b14-3 [420 kB] Get:159 http://ftpmaster.internal/ubuntu zesty/main i386 default-jdk i386 2:1.8-57ubuntu1 [966 B] Get:160 http://ftpmaster.internal/ubuntu zesty/main i386 mysql-common all 5.8+1.0.0ubuntu1 [5476 B] Get:161 http://ftpmaster.internal/ubuntu zesty/main i386 libmysqlclient20 i386 5.7.16-0ubuntu2 [803 kB] Get:162 http://ftpmaster.internal/ubuntu zesty/main i386 zlib1g-dev i386 1:1.2.8.dfsg-2ubuntu5 [167 kB] Get:163 http://ftpmaster.internal/ubuntu zesty/main i386 libmysqlclient-dev i386 5.7.16-0ubuntu2 [1144 kB] Get:164 http://ftpmaster.internal/ubuntu zesty/main i386 default-libmysqlclient-dev all 1.0.0ubuntu1 [3132 B] Get:165 http://ftpmaster.internal/ubuntu zesty/main i386 comerr-dev i386 2.1-1.43.3-1 [38.9 kB] Get:166 http://ftpmaster.internal/ubuntu zesty/main i386 krb5-multidev i386 1.15~beta1-1 [116 kB] Get:167 http://ftpmaster.internal/ubuntu zesty/main i386 libexpat1-dev i386 2.2.0-1 [116 kB] Get:168 http://ftpmaster.internal/ubuntu zesty/main i386 libpng-dev i386 1.6.26-2ubuntu1 [152 kB] Get:169 http://ftpmaster.internal/ubuntu zesty/main i386 libfreetype6-dev i386 2.6.3-3ubuntu1 [5185 kB] Get:170 http://ftpmaster.internal/ubuntu zesty/main i386 pkg-config i386 0.29.1-0ubuntu1 [45.8 kB] Get:171 http://ftpmaster.internal/ubuntu zesty/main i386 libfontconfig1-dev i386 2.11.94-0ubuntu2 [660 kB] Get:172 http://ftpmaster.internal/ubuntu zesty/main i386 libwebp6 i386 0.5.1-2ubuntu1 [182 kB] Get:173 http://ftpmaster.internal/ubuntu zesty/main i386 libgd3 i386 2.2.3-87-gd0fec80-3 [114 kB] Get:174 http://ftpmaster.internal/ubuntu zesty/main i386 libjpeg-turbo8-dev i386 1.5.1-0ubuntu1 [270 kB] Get:175 http://ftpmaster.internal/ubuntu zesty/main i386 libjpeg8-dev i386 8c-2ubuntu8 [1546 B] Get:176 http://ftpmaster.internal/ubuntu zesty/main i386 libjpeg-dev i386 8c-2ubuntu8 [1544 B] Get:177 http://ftpmaster.internal/ubuntu zesty/main i386 xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:178 http://ftpmaster.internal/ubuntu zesty/main i386 x11proto-core-dev all 7.0.31-1 [700 kB] Get:179 http://ftpmaster.internal/ubuntu zesty/main i386 libxau-dev i386 1:1.0.8-1 [10.2 kB] Get:180 http://ftpmaster.internal/ubuntu zesty/main i386 libxdmcp-dev i386 1:1.1.2-1.1 [25.0 kB] Get:181 http://ftpmaster.internal/ubuntu zesty/main i386 x11proto-input-dev all 2.3.2-1 [118 kB] Get:182 http://ftpmaster.internal/ubuntu zesty/main i386 x11proto-kb-dev all 1.0.7-1 [226 kB] Get:183 http://ftpmaster.internal/ubuntu zesty/main i386 xtrans-dev all 1.3.5-1 [70.5 kB] Get:184 http://ftpmaster.internal/ubuntu zesty/main i386 libpthread-stubs0-dev i386 0.3-4 [4054 B] Get:185 http://ftpmaster.internal/ubuntu zesty/main i386 libxcb1-dev i386 1.11.1-1ubuntu1 [76.3 kB] Get:186 http://ftpmaster.internal/ubuntu zesty/main i386 libx11-dev i386 2:1.6.3-1ubuntu3 [661 kB] Get:187 http://ftpmaster.internal/ubuntu zesty/main i386 libxpm-dev i386 1:3.5.11-1 [84.0 kB] Get:188 http://ftpmaster.internal/ubuntu zesty/main i386 libice-dev i386 2:1.0.9-1 [42.4 kB] Get:189 http://ftpmaster.internal/ubuntu zesty/main i386 libsm-dev i386 2:1.2.2-1 [15.1 kB] Get:190 http://ftpmaster.internal/ubuntu zesty/main i386 libxt-dev i386 1:1.1.5-1 [393 kB] Get:191 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libvpx4 i386 1.6.0-3 [699 kB] Get:192 http://ftpmaster.internal/ubuntu zesty-proposed/main i386 libvpx-dev i386 1.6.0-3 [801 kB] Get:193 http://ftpmaster.internal/ubuntu zesty/main i386 libjbig-dev i386 2.1-3.1 [24.1 kB] Get:194 http://ftpmaster.internal/ubuntu zesty/main i386 liblzma-dev i386 5.2.2-1.2 [149 kB] Get:195 http://ftpmaster.internal/ubuntu zesty/main i386 libtiffxx5 i386 4.0.7-1 [6226 B] Get:196 http://ftpmaster.internal/ubuntu zesty/main i386 libtiff5-dev i386 4.0.7-1 [284 kB] Get:197 http://ftpmaster.internal/ubuntu zesty/main i386 libgd-dev i386 2.2.3-87-gd0fec80-3 [245 kB] Get:198 http://ftpmaster.internal/ubuntu zesty/universe i386 libgdchart-gd2-xpm i386 0.11.5-8 [37.0 kB] Get:199 http://ftpmaster.internal/ubuntu zesty/universe i386 libgdchart-gd2-xpm-dev i386 0.11.5-8 [41.3 kB] Get:200 http://ftpmaster.internal/ubuntu zesty/universe i386 libhpdf-2.2.1 i386 2.2.1-1.1build1 [343 kB] Get:201 http://ftpmaster.internal/ubuntu zesty/main i386 libpq5 i386 9.5.5-0ubuntu1 [84.7 kB] Get:202 http://ftpmaster.internal/ubuntu zesty/main i386 libssl-dev i386 1.0.2g-1ubuntu10 [1130 kB] Get:203 http://ftpmaster.internal/ubuntu zesty/main i386 libpq-dev i386 9.5.5-0ubuntu1 [164 kB] Get:204 http://ftpmaster.internal/ubuntu zesty/main i386 sharutils i386 1:4.15.2-1 [149 kB] Get:205 http://ftpmaster.internal/ubuntu zesty/universe i386 tcsh i386 6.18.01-5ubuntu1 [416 kB] Get:206 http://ftpmaster.internal/ubuntu zesty/universe i386 libhpdf-dev i386 2.2.1-1.1build1 [31.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 105 MB in 23s (4443 kB/s) Selecting previously unselected package libxau6:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14123 files and directories currently installed.) Preparing to unpack .../000-libxau6_1%3a1.0.8-1_i386.deb ... Unpacking libxau6:i386 (1:1.0.8-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../001-libxdmcp6_1%3a1.1.2-1.1_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-1.1) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../002-libxcb1_1.11.1-1ubuntu1_i386.deb ... 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Unpacking libjpeg8:i386 (8c-2ubuntu8) ... Selecting previously unselected package libpcsclite1:i386. Preparing to unpack .../050-libpcsclite1_1.8.14-1ubuntu1_i386.deb ... Unpacking libpcsclite1:i386 (1.8.14-1ubuntu1) ... Selecting previously unselected package libxi6:i386. Preparing to unpack .../051-libxi6_2%3a1.7.6-1ubuntu1_i386.deb ... Unpacking libxi6:i386 (2:1.7.6-1ubuntu1) ... Selecting previously unselected package openjdk-8-jre-headless:i386. Preparing to unpack .../052-openjdk-8-jre-headless_8u111-b14-3_i386.deb ... Unpacking openjdk-8-jre-headless:i386 (8u111-b14-3) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../053-libjbig0_2.1-3.1_i386.deb ... Unpacking libjbig0:i386 (2.1-3.1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../054-libmagic-mgc_1%3a5.29-1_i386.deb ... Unpacking libmagic-mgc (1:5.29-1) ... Selecting previously unselected package libmagic1:i386. 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Selecting previously unselected package libkadm5srv-mit11:i386. Preparing to unpack .../067-libkadm5srv-mit11_1.15~beta1-1_i386.deb ... Unpacking libkadm5srv-mit11:i386 (1.15~beta1-1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../068-libxml2_2.9.4+dfsg1-2.1_i386.deb ... Unpacking libxml2:i386 (2.9.4+dfsg1-2.1) ... Selecting previously unselected package libxmuu1:i386. Preparing to unpack .../069-libxmuu1_2%3a1.1.2-2_i386.deb ... Unpacking libxmuu1:i386 (2:1.1.2-2) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../070-shared-mime-info_1.7-1_i386.deb ... Unpacking shared-mime-info (1.7-1) ... Selecting previously unselected package hicolor-icon-theme. Preparing to unpack .../071-hicolor-icon-theme_0.15-1_all.deb ... Unpacking hicolor-icon-theme (0.15-1) ... Selecting previously unselected package libtiff5:i386. Preparing to unpack .../072-libtiff5_4.0.7-1_i386.deb ... Unpacking libtiff5:i386 (4.0.7-1) ... Selecting previously unselected package libgdk-pixbuf2.0-common. Preparing to unpack .../073-libgdk-pixbuf2.0-common_2.36.0-1ubuntu1_all.deb ... Unpacking libgdk-pixbuf2.0-common (2.36.0-1ubuntu1) ... Selecting previously unselected package libgdk-pixbuf2.0-0:i386. Preparing to unpack .../074-libgdk-pixbuf2.0-0_2.36.0-1ubuntu1_i386.deb ... Unpacking libgdk-pixbuf2.0-0:i386 (2.36.0-1ubuntu1) ... Selecting previously unselected package gtk-update-icon-cache. Preparing to unpack .../075-gtk-update-icon-cache_3.22.4-1ubuntu1_i386.deb ... No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. Unpacking gtk-update-icon-cache (3.22.4-1ubuntu1) ... Selecting previously unselected package libpixman-1-0:i386. Preparing to unpack .../076-libpixman-1-0_0.34.0-1_i386.deb ... 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Selecting previously unselected package liblzma-dev:i386. Preparing to unpack .../192-liblzma-dev_5.2.2-1.2_i386.deb ... Unpacking liblzma-dev:i386 (5.2.2-1.2) ... Selecting previously unselected package libtiffxx5:i386. Preparing to unpack .../193-libtiffxx5_4.0.7-1_i386.deb ... Unpacking libtiffxx5:i386 (4.0.7-1) ... Selecting previously unselected package libtiff5-dev:i386. Preparing to unpack .../194-libtiff5-dev_4.0.7-1_i386.deb ... Unpacking libtiff5-dev:i386 (4.0.7-1) ... Selecting previously unselected package libgd-dev:i386. Preparing to unpack .../195-libgd-dev_2.2.3-87-gd0fec80-3_i386.deb ... Unpacking libgd-dev:i386 (2.2.3-87-gd0fec80-3) ... Selecting previously unselected package libgdchart-gd2-xpm. Preparing to unpack .../196-libgdchart-gd2-xpm_0.11.5-8_i386.deb ... Unpacking libgdchart-gd2-xpm (0.11.5-8) ... Selecting previously unselected package libgdchart-gd2-xpm-dev. Preparing to unpack .../197-libgdchart-gd2-xpm-dev_0.11.5-8_i386.deb ... Unpacking libgdchart-gd2-xpm-dev (0.11.5-8) ... Selecting previously unselected package libhpdf-2.2.1. Preparing to unpack .../198-libhpdf-2.2.1_2.2.1-1.1build1_i386.deb ... Unpacking libhpdf-2.2.1 (2.2.1-1.1build1) ... Selecting previously unselected package libpq5:i386. Preparing to unpack .../199-libpq5_9.5.5-0ubuntu1_i386.deb ... Unpacking libpq5:i386 (9.5.5-0ubuntu1) ... Selecting previously unselected package libssl-dev:i386. Preparing to unpack .../200-libssl-dev_1.0.2g-1ubuntu10_i386.deb ... Unpacking libssl-dev:i386 (1.0.2g-1ubuntu10) ... Selecting previously unselected package libpq-dev. Preparing to unpack .../201-libpq-dev_9.5.5-0ubuntu1_i386.deb ... Unpacking libpq-dev (9.5.5-0ubuntu1) ... Selecting previously unselected package sharutils. Preparing to unpack .../202-sharutils_1%3a4.15.2-1_i386.deb ... Unpacking sharutils (1:4.15.2-1) ... Selecting previously unselected package tcsh. Preparing to unpack .../203-tcsh_6.18.01-5ubuntu1_i386.deb ... Unpacking tcsh (6.18.01-5ubuntu1) ... Selecting previously unselected package libhpdf-dev. Preparing to unpack .../204-libhpdf-dev_2.2.1-1.1build1_i386.deb ... Unpacking libhpdf-dev (2.2.1-1.1build1) ... Selecting previously unselected package sbuild-build-depends-emboss-dummy. Preparing to unpack .../205-sbuild-build-depends-emboss-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-emboss-dummy (0.invalid.0) ... Setting up libedit2:i386 (3.1-20160903-2) ... Setting up libhpdf-2.2.1 (2.2.1-1.1build1) ... Setting up libexpat1:i386 (2.2.0-1) ... Setting up libgtk2.0-common (2.24.31-1ubuntu1) ... Setting up libgssrpc4:i386 (1.15~beta1-1) ... Setting up libhpdf-dev (2.2.1-1.1build1) ... Setting up libasyncns0:i386 (0.8-6) ... Setting up libarchive-zip-perl (1.59-1) ... Setting up comerr-dev (2.1-1.43.3-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up liblcms2-2:i386 (2.7-1ubuntu1) ... Setting up libjbig0:i386 (2.1-3.1) ... Setting up libpcsclite1:i386 (1.8.14-1ubuntu1) ... Setting up libsigsegv2:i386 (2.10-5) ... Setting up libpthread-stubs0-dev:i386 (0.3-4) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libjson-c3:i386 (0.12.1-1ubuntu1) ... Setting up libelf1:i386 (0.166-2ubuntu1) ... Setting up groff-base (1.22.3-8) ... Setting up libglib2.0-0:i386 (2.51.0-2) ... No schema files found: doing nothing. Setting up mysql-common (5.8+1.0.0ubuntu1) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libasound2-data (1.1.2-1) ... Setting up sharutils (1:4.15.2-1) ... Setting up libxshmfence1:i386 (1.2-1) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up libllvm3.9:i386 (1:3.9-6ubuntu1) ... Setting up java-common (0.57ubuntu1) ... Setting up libgdk-pixbuf2.0-common (2.36.0-1ubuntu1) ... Setting up libdatrie1:i386 (0.2.10-4) ... Setting up gettext-base (0.19.8.1-1ubuntu2) ... Setting up libgif7:i386 (5.1.4-0.4) ... Setting up libjpeg-turbo8:i386 (1.5.1-0ubuntu1) ... Setting up libpipeline1:i386 (1.4.1-2) ... Setting up x11proto-kb-dev (1.0.7-1) ... Setting up libglapi-mesa:i386 (13.0.2-1ubuntu1) ... Setting up m4 (1.4.17-5) ... Setting up libicu57:i386 (57.1-5) ... Setting up libbsd0:i386 (0.8.3-1) ... Setting up libnspr4:i386 (2:4.12-2ubuntu1) ... Setting up ucf (3.0036) ... Setting up libvpx4:i386 (1.6.0-3) ... Setting up libxml2:i386 (2.9.4+dfsg1-2.1) ... Setting up libfreetype6:i386 (2.6.3-3ubuntu1) ... Setting up libmagic-mgc (1:5.29-1) ... Setting up libasound2:i386 (1.1.2-1) ... Setting up libdrm2:i386 (2.4.74-1) ... Setting up libmagic1:i386 (1:5.29-1) ... Setting up libgraphite2-3:i386 (1.3.9-2) ... Setting up libjbig-dev:i386 (2.1-3.1) ... Setting up libcroco3:i386 (0.6.11-2) ... Setting up libogg0:i386 (1.3.2-1) ... Setting up tcsh (6.18.01-5ubuntu1) ... update-alternatives: using /bin/tcsh to provide /bin/csh (csh) in auto mode Setting up libatk1.0-data (2.22.0-1) ... Setting up pkg-config (0.29.1-0ubuntu1) ... Setting up libvpx-dev:i386 (1.6.0-3) ... Setting up libx11-xcb1:i386 (2:1.6.3-1ubuntu3) ... Setting up libpixman-1-0:i386 (0.34.0-1) ... Setting up xtrans-dev (1.3.5-1) ... Setting up libjpeg-turbo8-dev:i386 (1.5.1-0ubuntu1) ... Setting up libpq5:i386 (9.5.5-0ubuntu1) ... Processing triggers for libc-bin (2.24-7ubuntu1) ... Setting up autotools-dev (20161112.1) ... Setting up libunistring0:i386 (0.9.3-5.2ubuntu1) ... Setting up libatk1.0-0:i386 (2.22.0-1) ... Processing triggers for systemd (232-7) ... Setting up libkdb5-8:i386 (1.15~beta1-1) ... Setting up libfontenc1:i386 (1:1.1.3-1) ... Setting up libexpat1-dev:i386 (2.2.0-1) ... Setting up libpciaccess0:i386 (0.13.4-1) ... Setting up libsensors4:i386 (1:3.4.0-3) ... Setting up shared-mime-info (1.7-1) ... Setting up libkadm5clnt-mit11:i386 (1.15~beta1-1) ... Setting up libmysqlclient20:i386 (5.7.16-0ubuntu2) ... Setting up libdrm-radeon1:i386 (2.4.74-1) ... Setting up libthai-data (0.1.25-2) ... Setting up liblzma-dev:i386 (5.2.2-1.2) ... Setting up libxdmcp6:i386 (1:1.1.2-1.1) ... Setting up libdrm-nouveau2:i386 (2.4.74-1) ... Setting up bsdmainutils (9.0.12ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libvorbis0a:i386 (1.3.5-3) ... Setting up x11-common (1:7.7+16ubuntu2) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Processing triggers for ca-certificates (20161102) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Setting up hicolor-icon-theme (0.15-1) ... Setting up antiword (0.37-11) ... Setting up libx11-data (2:1.6.3-1ubuntu3) ... Setting up libxau6:i386 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-1ubuntu2) ... Setting up libdbus-1-3:i386 (1.10.10-1ubuntu2) ... Setting up libwrap0:i386 (7.6.q-25) ... Setting up libavahi-common-data:i386 (0.6.32-1ubuntu1) ... Setting up libwebp6:i386 (0.5.1-2ubuntu1) ... Setting up zlib1g-dev:i386 (1:1.2.8.dfsg-2ubuntu5) ... Setting up libfile-stripnondeterminism-perl (0.028-1) ... Setting up libjpeg8:i386 (8c-2ubuntu8) ... Setting up fontconfig-config (2.11.94-0ubuntu2) ... Setting up x11proto-core-dev (7.0.31-1) ... Setting up libmysqlclient-dev (5.7.16-0ubuntu2) ... Setting up libdrm-amdgpu1:i386 (2.4.74-1) ... Setting up gettext (0.19.8.1-1ubuntu2) ... Setting up libssl-dev:i386 (1.0.2g-1ubuntu10) ... Setting up libflac8:i386 (1.3.1-4) ... Setting up libnss3:i386 (2:3.26.2-1ubuntu1) ... Setting up libharfbuzz0b:i386 (1.2.7-1) ... Setting up libtiff5:i386 (4.0.7-1) ... Setting up libxau-dev:i386 (1:1.0.8-1) ... Setting up autoconf (2.69-10) ... Setting up libthai0:i386 (0.1.25-2) ... Setting up file (1:5.29-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libdrm-intel1:i386 (2.4.74-1) ... Setting up libxdmcp-dev:i386 (1:1.1.2-1.1) ... Setting up libjpeg8-dev:i386 (8c-2ubuntu8) ... Setting up libjpeg-dev:i386 (8c-2ubuntu8) ... Setting up automake (1:1.15-5ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libkadm5srv-mit11:i386 (1.15~beta1-1) ... Setting up libice6:i386 (2:1.0.9-1) ... Setting up libtiffxx5:i386 (4.0.7-1) ... Setting up man-db (2.7.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libavahi-common3:i386 (0.6.32-1ubuntu1) ... Setting up default-libmysqlclient-dev (1.0.0ubuntu1) ... Setting up libpng-dev:i386 (1.6.26-2ubuntu1) ... Setting up libvorbisenc2:i386 (1.3.5-3) ... Setting up libxcb1:i386 (1.11.1-1ubuntu1) ... Setting up x11proto-input-dev (2.3.2-1) ... Setting up libtool (2.4.6-2) ... Setting up libxcb-present0:i386 (1.11.1-1ubuntu1) ... Setting up libfontconfig1:i386 (2.11.94-0ubuntu2) ... Setting up libxcb-dri2-0:i386 (1.11.1-1ubuntu1) ... Setting up libsm6:i386 (2:1.2.2-1) ... Setting up libxcb-dri3-0:i386 (1.11.1-1ubuntu1) ... Setting up libxcb-glx0:i386 (1.11.1-1ubuntu1) ... Setting up libxcb-render0:i386 (1.11.1-1ubuntu1) ... Setting up po-debconf (1.0.20) ... Setting up libtiff5-dev:i386 (4.0.7-1) ... Setting up libx11-6:i386 (2:1.6.3-1ubuntu3) ... Setting up libgl1-mesa-dri:i386 (13.0.2-1ubuntu1) ... Setting up libxmuu1:i386 (2:1.1.2-2) ... Setting up libxcb-sync1:i386 (1.11.1-1ubuntu1) ... Setting up libsndfile1:i386 (1.0.27-1) ... Setting up krb5-multidev (1.15~beta1-1) ... Setting up libfreetype6-dev:i386 (2.6.3-3ubuntu1) ... Setting up libice-dev:i386 (2:1.0.9-1) ... Setting up libxcomposite1:i386 (1:0.4.4-1) ... Setting up libxcb-shm0:i386 (1.11.1-1ubuntu1) ... Setting up libxpm4:i386 (1:3.5.11-1) ... Setting up libxt6:i386 (1:1.1.5-1) ... Setting up libxcb-shape0:i386 (1.11.1-1ubuntu1) ... Setting up libxrender1:i386 (1:0.9.9-2) ... Setting up libxcb1-dev:i386 (1.11.1-1ubuntu1) ... Setting up libavahi-client3:i386 (0.6.32-1ubuntu1) ... Setting up libx11-dev:i386 (2:1.6.3-1ubuntu3) ... Setting up libxft2:i386 (2.3.2-1) ... Setting up fontconfig (2.11.94-0ubuntu2) ... Regenerating fonts cache... done. Setting up libcups2:i386 (2.2.1-2) ... Setting up libfontconfig1-dev:i386 (2.11.94-0ubuntu2) ... Setting up libsm-dev:i386 (2:1.2.2-1) ... Setting up libpq-dev (9.5.5-0ubuntu1) ... Setting up libxdamage1:i386 (1:1.1.4-2) ... Setting up libxext6:i386 (2:1.3.3-1) ... Setting up libxfixes3:i386 (1:5.0.2-1) ... Setting up libxpm-dev:i386 (1:3.5.11-1) ... Setting up libatspi2.0-0:i386 (2.22.0-3ubuntu1) ... Setting up libgdk-pixbuf2.0-0:i386 (2.36.0-1ubuntu1) ... Setting up libgd3:i386 (2.2.3-87-gd0fec80-3) ... Setting up libpulse0:i386 (1:9.0-5ubuntu3) ... Setting up libxtst6:i386 (2:1.2.2-1) ... Setting up libxmu6:i386 (2:1.1.2-2) ... Setting up gtk-update-icon-cache (3.22.4-1ubuntu1) ... Setting up libxcursor1:i386 (1:1.1.14-1) ... Setting up libxxf86dga1:i386 (2:1.1.4-1) ... Setting up libpango-1.0-0:i386 (1.40.3-3) ... Setting up libatk-bridge2.0-0:i386 (2.22.0-1ubuntu1) ... Setting up libxv1:i386 (2:1.0.10-1) ... Setting up libxxf86vm1:i386 (1:1.1.4-1) ... Setting up libgdchart-gd2-xpm (0.11.5-8) ... Setting up libxrandr2:i386 (2:1.5.0-1) ... Setting up libxi6:i386 (2:1.7.6-1ubuntu1) ... Setting up libxaw7:i386 (2:1.0.13-1) ... Setting up libcairo2:i386 (1.14.6-1.1) ... Setting up libxinerama1:i386 (2:1.1.3-1) ... Setting up libxt-dev:i386 (1:1.1.5-1) ... Setting up libpangoft2-1.0-0:i386 (1.40.3-3) ... Setting up libgd-dev:i386 (2.2.3-87-gd0fec80-3) ... Setting up libgdchart-gd2-xpm-dev (0.11.5-8) ... Setting up libgl1-mesa-glx:i386 (13.0.2-1ubuntu1) ... update-alternatives: using /usr/lib/i386-linux-gnu/mesa/ld.so.conf to provide /etc/ld.so.conf.d/i386-linux-gnu_GL.conf (i386-linux-gnu_gl_conf) in auto mode Setting up x11-utils (7.7+3) ... Setting up libpangocairo-1.0-0:i386 (1.40.3-3) ... Setting up libatk-wrapper-java (0.33.3-11) ... Setting up librsvg2-2:i386 (2.40.16-1) ... Setting up librsvg2-common:i386 (2.40.16-1) ... Setting up libatk-wrapper-java-jni:i386 (0.33.3-11) ... Setting up openjdk-8-jre-headless:i386 (8u111-b14-3) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/orbd to provide /usr/bin/orbd (orbd) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/servertool to provide /usr/bin/servertool (servertool) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/tnameserv to provide /usr/bin/tnameserv (tnameserv) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode OpenJDK Server VM warning: ignoring option PermSize=128m; support was removed in 8.0 Setting up adwaita-icon-theme (3.20-3ubuntu2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgtk2.0-0:i386 (2.24.31-1ubuntu1) ... Setting up ca-certificates-java (20161107) ... Adding debian:Starfield_Class_2_CA.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:OpenTrust_Root_CA_G3.pem Adding debian:TÜRKTRUST_Elektronik_Sertifika_Hizmet_Sağlayıcısı_H5.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem Adding debian:Certinomis_-_Autorité_Racine.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:DST_ACES_CA_X6.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:CNNIC_ROOT.pem Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:GeoTrust_Global_CA_2.pem Adding debian:Deutsche_Telekom_Root_CA_2.pem Adding debian:Camerfirma_Chambers_of_Commerce_Root.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:ACCVRAIZ1.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem Adding debian:Chambers_of_Commerce_Root_-_2008.pem Adding debian:UTN_USERFirst_Hardware_Root_CA.pem Adding debian:Comodo_Secure_Services_root.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem Adding debian:RSA_Security_2048_v3.pem Adding debian:ApplicationCA_-_Japanese_Government.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G2.pem Adding debian:Certplus_Root_CA_G1.pem Adding debian:Camerfirma_Global_Chambersign_Root.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:IGC_A.pem Adding debian:OpenTrust_Root_CA_G1.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:WellsSecure_Public_Root_Certificate_Authority.pem Adding debian:SecureSign_RootCA11.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2007.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:PSCProcert.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:WoSign_China.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:ISRG_Root_X1.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem Adding debian:GeoTrust_Global_CA.pem Adding debian:SwissSign_Platinum_CA_-_G2.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:AffirmTrust_Premium.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:Root_CA_Generalitat_Valenciana.pem Adding debian:thawte_Primary_Root_CA_-_G2.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:UTN_USERFirst_Email_Root_CA.pem Adding debian:Certification_Authority_of_WoSign_G2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Juur-SK.pem Adding debian:TC_TrustCenter_Class_3_CA_II.pem Adding debian:Certplus_Class_2_Primary_CA.pem Adding debian:Sonera_Class_2_Root_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:DST_Root_CA_X3.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:AC_Raíz_Certicámara_S.A..pem Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Buypass_Class_2_CA_1.pem Adding debian:CA_Disig_Root_R1.pem Adding debian:Certinomis_-_Root_CA.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G3.pem Adding debian:QuoVadis_Root_CA.pem Adding debian:CA_WoSign_ECC_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:WoSign.pem Adding debian:SecureTrust_CA.pem Adding debian:EC-ACC.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Trustis_FPS_Root_CA.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:GeoTrust_Universal_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:Certum_Root_CA.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:thawte_Primary_Root_CA_-_G3.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:ComSign_CA.pem Adding debian:EBG_Elektronik_Sertifika_Hizmet_Sağlayıcısı.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certplus_Root_CA_G2.pem Adding debian:Equifax_Secure_eBusiness_CA_1.pem Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Microsec_e-Szigno_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:ACEDICOM_Root.pem Adding debian:Security_Communication_EV_RootCA1.pem Adding debian:Visa_eCommerce_Root.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:Taiwan_GRCA.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:StartCom_Certification_Authority_G2.pem Adding debian:S-TRUST_Authentication_and_Encryption_Root_CA_2005_PN.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:AddTrust_External_Root.pem Adding debian:AffirmTrust_Networking.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:TÜBİTAK_UEKAE_Kök_Sertifika_Hizmet_Sağlayıcısı_-_Sürüm_3.pem Adding debian:VeriSign_Universal_Root_Certification_Authority.pem Adding debian:StartCom_Certification_Authority_2.pem Adding debian:Comodo_Trusted_Services_root.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:Equifax_Secure_Global_eBusiness_CA.pem Adding debian:Equifax_Secure_CA.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:StartCom_Certification_Authority.pem Adding debian:TÜRKTRUST_Elektronik_Sertifika_Hizmet_Sağlayıcısı_H6.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:AddTrust_Low-Value_Services_Root.pem Adding debian:GeoTrust_Universal_CA_2.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:Global_Chambersign_Root_-_2008.pem Adding debian:Swisscom_Root_EV_CA_2.pem Adding debian:AddTrust_Public_Services_Root.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:Swisscom_Root_CA_2.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:Izenpe.com.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:thawte_Primary_Root_CA.pem Adding debian:Certigna.pem Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G3.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem Adding debian:S-TRUST_Universal_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:EE_Certification_Centre_Root_CA.pem Adding debian:AddTrust_Qualified_Certificates_Root.pem Adding debian:China_Internet_Network_Information_Center_EV_Certificates_Root.pem Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem Adding debian:Swisscom_Root_CA_1.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:OpenTrust_Root_CA_G2.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GeoTrust_Primary_Certification_Authority.pem done. Setting up dh-autoreconf (12) ... Setting up openjdk-8-jdk-headless:i386 (8u111-b14-3) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/idlj to provide /usr/bin/idlj (idlj) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/wsimport to provide /usr/bin/wsimport (wsimport) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jsadebugd to provide /usr/bin/jsadebugd (jsadebugd) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/native2ascii to provide /usr/bin/native2ascii (native2ascii) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/javah to provide /usr/bin/javah (javah) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/xjc to provide /usr/bin/xjc (xjc) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/schemagen to provide /usr/bin/schemagen (schemagen) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/extcheck to provide /usr/bin/extcheck (extcheck) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jhat to provide /usr/bin/jhat (jhat) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/wsgen to provide /usr/bin/wsgen (wsgen) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode Setting up humanity-icon-theme (0.6.11) ... Setting up dh-strip-nondeterminism (0.028-1) ... Setting up openjdk-8-jre:i386 (8u111-b14-3) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/jre/bin/policytool to provide /usr/bin/policytool (policytool) in auto mode Setting up ant (1.9.7-3) ... Setting up default-jre-headless (2:1.8-57ubuntu1) ... Setting up default-jdk-headless (2:1.8-57ubuntu1) ... Setting up debhelper (10.2.2ubuntu1) ... Setting up openjdk-8-jdk:i386 (8u111-b14-3) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/appletviewer to provide /usr/bin/appletviewer (appletviewer) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-i386/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up ubuntu-mono (16.10+17.04.20161118-0ubuntu1) ... Setting up default-jre (2:1.8-57ubuntu1) ... Setting up default-jdk (2:1.8-57ubuntu1) ... Setting up sbuild-build-depends-emboss-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.24-7ubuntu1) ... Processing triggers for systemd (232-7) ... Processing triggers for libgdk-pixbuf2.0-0:i386 (2.36.0-1ubuntu1) ... Processing triggers for ca-certificates (20161102) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-51-generic amd64 (i686) Toolchain package versions: binutils_2.27.51.20161202-0ubuntu1 dpkg-dev_1.18.10ubuntu1 g++-6_6.2.1-5ubuntu2 gcc-6_6.2.1-5ubuntu2 libc6-dev_2.24-7ubuntu1 libstdc++-6-dev_6.2.1-5ubuntu2 libstdc++6_6.2.1-5ubuntu2 linux-libc-dev_4.9.0-6.7 Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_1.20-1 adwaita-icon-theme_3.20-3ubuntu2 ant_1.9.7-3 antiword_0.37-11 apt_1.4~beta1 apt-transport-https_1.4~beta1 autoconf_2.69-10 automake_1:1.15-5ubuntu1 autopoint_0.19.8.1-1ubuntu2 autotools-dev_20161112.1 base-files_9.6ubuntu7 base-passwd_3.5.42 bash_4.4-2ubuntu1 binutils_2.27.51.20161202-0ubuntu1 bsdmainutils_9.0.12ubuntu1 bsdutils_1:2.29-1ubuntu2 build-essential_12.1ubuntu2 bzip2_1.0.6-8build1 ca-certificates_20161102 ca-certificates-java_20161107 comerr-dev_2.1-1.43.3-1 coreutils_8.25-2ubuntu2 cpp_4:6.2.1-1ubuntu1 cpp-6_6.2.1-5ubuntu2 dash_0.5.8-2.3ubuntu1 debconf_1.5.59ubuntu1 debhelper_10.2.2ubuntu1 debianutils_4.8.1 default-jdk_2:1.8-57ubuntu1 default-jdk-headless_2:1.8-57ubuntu1 default-jre_2:1.8-57ubuntu1 default-jre-headless_2:1.8-57ubuntu1 default-libmysqlclient-dev_1.0.0ubuntu1 dh-autoreconf_12 dh-strip-nondeterminism_0.028-1 diffutils_1:3.5-1 dmsetup_2:1.02.136-1ubuntu1 dpkg_1.18.10ubuntu1 dpkg-dev_1.18.10ubuntu1 e2fslibs_1.43.3-1 e2fsprogs_1.43.3-1 fakeroot_1.21-1ubuntu2 file_1:5.29-1 findutils_4.6.0+git+20161106-1 fontconfig_2.11.94-0ubuntu2 fontconfig-config_2.11.94-0ubuntu2 fonts-dejavu-core_2.37-1 g++_4:6.2.1-1ubuntu1 g++-6_6.2.1-5ubuntu2 gcc_4:6.2.1-1ubuntu1 gcc-6_6.2.1-5ubuntu2 gcc-6-base_6.2.1-5ubuntu2 gettext_0.19.8.1-1ubuntu2 gettext-base_0.19.8.1-1ubuntu2 gnupg_2.1.15-1ubuntu6 gnupg-agent_2.1.15-1ubuntu6 gpgv_2.1.15-1ubuntu6 grep_2.26-1 groff-base_1.22.3-8 gtk-update-icon-cache_3.22.4-1ubuntu1 gzip_1.6-4ubuntu1 hicolor-icon-theme_0.15-1 hostname_3.18 humanity-icon-theme_0.6.11 init_1.46 init-system-helpers_1.46 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 java-common_0.57ubuntu1 krb5-multidev_1.15~beta1-1 libacl1_2.2.52-3 libapparmor1_2.10.95-4ubuntu5.2 libapt-pkg5.0_1.4~beta1 libarchive-zip-perl_1.59-1 libasan3_6.2.1-5ubuntu2 libasn1-8-heimdal_1.7~git20160703+dfsg-1ubuntu1 libasound2_1.1.2-1 libasound2-data_1.1.2-1 libassuan0_2.4.3-2 libasyncns0_0.8-6 libatk-bridge2.0-0_2.22.0-1ubuntu1 libatk-wrapper-java_0.33.3-11 libatk-wrapper-java-jni_0.33.3-11 libatk1.0-0_2.22.0-1 libatk1.0-data_2.22.0-1 libatomic1_6.2.1-5ubuntu2 libatspi2.0-0_2.22.0-3ubuntu1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.6-1ubuntu1 libaudit1_1:2.6.6-1ubuntu1 libavahi-client3_0.6.32-1ubuntu1 libavahi-common-data_0.6.32-1ubuntu1 libavahi-common3_0.6.32-1ubuntu1 libblkid1_2.29-1ubuntu2 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8build1 libc-bin_2.24-7ubuntu1 libc-dev-bin_2.24-7ubuntu1 libc6_2.24-7ubuntu1 libc6-dev_2.24-7ubuntu1 libcairo2_1.14.6-1.1 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_6.2.1-5ubuntu2 libcilkrts5_6.2.1-5ubuntu2 libcomerr2_1.43.3-1 libcroco3_0.6.11-2 libcryptsetup4_2:1.7.2-0ubuntu1 libcups2_2.2.1-2 libcurl3-gnutls_7.51.0-1ubuntu1 libdatrie1_0.2.10-4 libdb5.3_5.3.28-12 libdbus-1-3_1.10.10-1ubuntu2 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.136-1ubuntu1 libdpkg-perl_1.18.10ubuntu1 libdrm-amdgpu1_2.4.74-1 libdrm-intel1_2.4.74-1 libdrm-nouveau2_2.4.74-1 libdrm-radeon1_2.4.74-1 libdrm2_2.4.74-1 libedit2_3.1-20160903-2 libelf1_0.166-2ubuntu1 libexpat1_2.2.0-1 libexpat1-dev_2.2.0-1 libfakeroot_1.21-1ubuntu2 libfdisk1_2.29-1ubuntu2 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.028-1 libflac8_1.3.1-4 libfontconfig1_2.11.94-0ubuntu2 libfontconfig1-dev_2.11.94-0ubuntu2 libfontenc1_1:1.1.3-1 libfreetype6_2.6.3-3ubuntu1 libfreetype6-dev_2.6.3-3ubuntu1 libgcc-6-dev_6.2.1-5ubuntu2 libgcc1_1:6.2.1-5ubuntu2 libgcrypt20_1.7.3-2 libgd-dev_2.2.3-87-gd0fec80-3 libgd3_2.2.3-87-gd0fec80-3 libgdbm3_1.8.3-14 libgdchart-gd2-xpm_0.11.5-8 libgdchart-gd2-xpm-dev_0.11.5-8 libgdk-pixbuf2.0-0_2.36.0-1ubuntu1 libgdk-pixbuf2.0-common_2.36.0-1ubuntu1 libgif7_5.1.4-0.4 libgl1-mesa-dri_13.0.2-1ubuntu1 libgl1-mesa-glx_13.0.2-1ubuntu1 libglapi-mesa_13.0.2-1ubuntu1 libglib2.0-0_2.51.0-2 libgmp10_2:6.1.1+dfsg-1 libgnutls30_3.5.6-4ubuntu2 libgomp1_6.2.1-5ubuntu2 libgpg-error0_1.25-1 libgraphite2-3_1.3.9-2 libgssapi-krb5-2_1.15~beta1-1 libgssapi3-heimdal_1.7~git20160703+dfsg-1ubuntu1 libgssrpc4_1.15~beta1-1 libgtk2.0-0_2.24.31-1ubuntu1 libgtk2.0-common_2.24.31-1ubuntu1 libharfbuzz0b_1.2.7-1 libhcrypto4-heimdal_1.7~git20160703+dfsg-1ubuntu1 libheimbase1-heimdal_1.7~git20160703+dfsg-1ubuntu1 libheimntlm0-heimdal_1.7~git20160703+dfsg-1ubuntu1 libhogweed4_3.3-1 libhpdf-2.2.1_2.2.1-1.1build1 libhpdf-dev_2.2.1-1.1build1 libhx509-5-heimdal_1.7~git20160703+dfsg-1ubuntu1 libice-dev_2:1.0.9-1 libice6_2:1.0.9-1 libicu57_57.1-5 libidn11_1.33-1 libip4tc0_1.6.0-3ubuntu2 libisl15_0.17.1-1 libitm1_6.2.1-5ubuntu2 libjbig-dev_2.1-3.1 libjbig0_2.1-3.1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_1.5.1-0ubuntu1 libjpeg-turbo8-dev_1.5.1-0ubuntu1 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c3_0.12.1-1ubuntu1 libk5crypto3_1.15~beta1-1 libkadm5clnt-mit11_1.15~beta1-1 libkadm5srv-mit11_1.15~beta1-1 libkdb5-8_1.15~beta1-1 libkeyutils1_1.5.9-9ubuntu1 libkmod2_22-1.1ubuntu1 libkrb5-26-heimdal_1.7~git20160703+dfsg-1ubuntu1 libkrb5-3_1.15~beta1-1 libkrb5support0_1.15~beta1-1 libksba8_1.3.5-2 liblcms2-2_2.7-1ubuntu1 libldap-2.4-2_2.4.42+dfsg-2ubuntu5 libllvm3.9_1:3.9-6ubuntu1 liblockfile-bin_1.09-6ubuntu1 liblockfile1_1.09-6ubuntu1 liblz4-1_0.0~r131-2ubuntu2 liblzma-dev_5.2.2-1.2 liblzma5_5.2.2-1.2 libmagic-mgc_1:5.29-1 libmagic1_1:5.29-1 libmount1_2.29-1ubuntu2 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libmpx2_6.2.1-5ubuntu2 libmysqlclient-dev_5.7.16-0ubuntu2 libmysqlclient20_5.7.16-0ubuntu2 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.3-1 libnpth0_1.3-1 libnspr4_2:4.12-2ubuntu1 libnss3_2:3.26.2-1ubuntu1 libogg0_1.3.2-1 libp11-kit0_0.23.2-5 libpam-modules_1.1.8-3.2ubuntu2 libpam-modules-bin_1.1.8-3.2ubuntu2 libpam-runtime_1.1.8-3.2ubuntu2 libpam0g_1.1.8-3.2ubuntu2 libpango-1.0-0_1.40.3-3 libpangocairo-1.0-0_1.40.3-3 libpangoft2-1.0-0_1.40.3-3 libpciaccess0_0.13.4-1 libpcre3_2:8.39-2 libpcsclite1_1.8.14-1ubuntu1 libperl5.22_5.22.2-3 libperl5.24_5.24.1~rc4-1 libpipeline1_1.4.1-2 libpixman-1-0_0.34.0-1 libpng-dev_1.6.26-2ubuntu1 libpng16-16_1.6.26-2ubuntu1 libpq-dev_9.5.5-0ubuntu1 libpq5_9.5.5-0ubuntu1 libprocps6_2:3.3.12-1ubuntu2 libpthread-stubs0-dev_0.3-4 libpulse0_1:9.0-5ubuntu3 libquadmath0_6.2.1-5ubuntu2 libreadline7_7.0-0ubuntu2 libroken18-heimdal_1.7~git20160703+dfsg-1ubuntu1 librsvg2-2_2.40.16-1 librsvg2-common_2.40.16-1 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~72-g88d82a3+dfsg-1 libsasl2-modules-db_2.1.27~72-g88d82a3+dfsg-1 libseccomp2_2.3.1-2ubuntu2 libselinux1_2.6-3 libsemanage-common_2.6-1 libsemanage1_2.6-1 libsensors4_1:3.4.0-3 libsepol1_2.6-1 libsigsegv2_2.10-5 libslang2_2.3.1-5ubuntu1 libsm-dev_2:1.2.2-1 libsm6_2:1.2.2-1 libsmartcols1_2.29-1ubuntu2 libsndfile1_1.0.27-1 libsqlite3-0_3.15.2-1 libss2_1.43.3-1 libssl-dev_1.0.2g-1ubuntu10 libssl1.0.0_1.0.2g-1ubuntu10 libstdc++-6-dev_6.2.1-5ubuntu2 libstdc++6_6.2.1-5ubuntu2 libsystemd0_232-7 libtasn1-6_4.9-4 libthai-data_0.1.25-2 libthai0_0.1.25-2 libtiff5_4.0.7-1 libtiff5-dev_4.0.7-1 libtiffxx5_4.0.7-1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-2 libubsan0_6.2.1-5ubuntu2 libudev1_232-7 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-6 libuuid1_2.29-1ubuntu2 libvorbis0a_1.3.5-3 libvorbisenc2_1.3.5-3 libvpx-dev_1.6.0-3 libvpx4_1.6.0-3 libwebp6_0.5.1-2ubuntu1 libwind0-heimdal_1.7~git20160703+dfsg-1ubuntu1 libwrap0_7.6.q-25 libx11-6_2:1.6.3-1ubuntu3 libx11-data_2:1.6.3-1ubuntu3 libx11-dev_2:1.6.3-1ubuntu3 libx11-xcb1_2:1.6.3-1ubuntu3 libxau-dev_1:1.0.8-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-dri2-0_1.11.1-1ubuntu1 libxcb-dri3-0_1.11.1-1ubuntu1 libxcb-glx0_1.11.1-1ubuntu1 libxcb-present0_1.11.1-1ubuntu1 libxcb-render0_1.11.1-1ubuntu1 libxcb-shape0_1.11.1-1ubuntu1 libxcb-shm0_1.11.1-1ubuntu1 libxcb-sync1_1.11.1-1ubuntu1 libxcb1_1.11.1-1ubuntu1 libxcb1-dev_1.11.1-1ubuntu1 libxcomposite1_1:0.4.4-1 libxcursor1_1:1.1.14-1 libxdamage1_1:1.1.4-2 libxdmcp-dev_1:1.1.2-1.1 libxdmcp6_1:1.1.2-1.1 libxext6_2:1.3.3-1 libxfixes3_1:5.0.2-1 libxft2_2.3.2-1 libxi6_2:1.7.6-1ubuntu1 libxinerama1_2:1.1.3-1 libxml2_2.9.4+dfsg1-2.1 libxmu6_2:1.1.2-2 libxmuu1_2:1.1.2-2 libxpm-dev_1:3.5.11-1 libxpm4_1:3.5.11-1 libxrandr2_2:1.5.0-1 libxrender1_1:0.9.9-2 libxshmfence1_1.2-1 libxt-dev_1:1.1.5-1 libxt6_1:1.1.5-1 libxtst6_2:1.2.2-1 libxv1_2:1.0.10-1 libxxf86dga1_2:1.1.4-1 libxxf86vm1_1:1.1.4-1 linux-libc-dev_4.9.0-6.7 lockfile-progs_0.1.17 login_1:4.2-3.2ubuntu1 lsb-base_9.20160110ubuntu5 m4_1.4.17-5 make_4.1-9 man-db_2.7.5-2 mawk_1.3.3-17ubuntu2 mount_2.29-1ubuntu2 multiarch-support_2.24-7ubuntu1 mysql-common_5.8+1.0.0ubuntu1 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 openjdk-8-jdk_8u111-b14-3 openjdk-8-jdk-headless_8u111-b14-3 openjdk-8-jre_8u111-b14-3 openjdk-8-jre-headless_8u111-b14-3 openssl_1.0.2g-1ubuntu10 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu1 patch_2.7.5-1 perl_5.24.1~rc4-1 perl-base_5.24.1~rc4-1 perl-modules-5.22_5.22.2-3 perl-modules-5.24_5.24.1~rc4-1 pinentry-curses_0.9.7-9 pkg-config_0.29.1-0ubuntu1 pkg-create-dbgsym_0.73 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-emboss-dummy_0.invalid.0 sed_4.2.2-8 sensible-utils_0.0.9 shared-mime-info_1.7-1 sharutils_1:4.15.2-1 systemd_232-7 systemd-sysv_232-7 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.8git1 tar_1.29b-1.1 tcsh_6.18.01-5ubuntu1 tzdata_2016j-2 ubuntu-keyring_2016.10.27 ubuntu-mono_16.10+17.04.20161118-0ubuntu1 ucf_3.0036 util-linux_2.29-1ubuntu2 x11-common_1:7.7+16ubuntu2 x11-utils_7.7+3 x11proto-core-dev_7.0.31-1 x11proto-input-dev_2.3.2-1 x11proto-kb-dev_1.0.7-1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-2ubuntu5 zlib1g-dev_1:1.2.8.dfsg-2ubuntu5 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sat Dec 3 09:39:49 2016 UTC gpgv: using RSA key gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./emboss_6.6.0+dfsg-6.dsc dpkg-source: info: extracting emboss in emboss-6.6.0+dfsg dpkg-source: info: unpacking emboss_6.6.0+dfsg.orig.tar.xz dpkg-source: info: unpacking emboss_6.6.0+dfsg-6.debian.tar.xz dpkg-source: info: applying using-pager-in-tfm.patch dpkg-source: info: applying tfm-html.patch dpkg-source: info: applying fix-postgresql-macro.patch dpkg-source: info: applying fix-mysql-macro.patch dpkg-source: info: applying bashism.patch dpkg-source: info: applying plplotP-correct-padding.patch dpkg-source: info: applying remove_non-free_doc.patch dpkg-source: info: applying path_max.patch dpkg-source: info: applying no_makejar.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/home/buildd LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd MAIL=/var/mail/buildd OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games PWD=/<>/emboss-6.6.0+dfsg SHELL=/bin/sh SUDO_COMMAND=/usr/sbin/chroot /<> su buildd -s /bin/sh -c cd '/<>/emboss-6.6.0+dfsg' && 'env' SUDO_GID=2501 SUDO_UID=2001 SUDO_USER=buildd TERM=unknown USER=buildd USERNAME=root dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package emboss dpkg-buildpackage: info: source version 6.6.0+dfsg-6 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build emboss-6.6.0+dfsg dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --with autotools-dev,autoreconf dh_testdir dh_auto_clean dh_autoreconf_clean dh_autotools-dev_restoreconfig for c_g in `find . -type f -name config.guess` ; do if test -e "$c_g.dh-orig" ; then mv -f "$c_g.dh-orig" "$c_g" ; fi ; done for c_s in `find . -type f -name config.sub` ; do if test -e "$c_s.dh-orig" ; then mv -f "$c_s.dh-orig" "$c_s" ; fi ; done find . -type f \( -name config.guess.dh-orig -o -name config.sub.dh-orig \) -delete rm -f debian/*.debhelper.log debian/rules override_dh_clean make[1]: Entering directory '/<>/emboss-6.6.0+dfsg' dh_autotools-dev_restoreconfig for c_g in `find . -type f -name config.guess` ; do if test -e "$c_g.dh-orig" ; then mv -f "$c_g.dh-orig" "$c_g" ; fi ; done for c_s in `find . -type f -name config.sub` ; do if test -e "$c_s.dh-orig" ; then mv -f "$c_s.dh-orig" "$c_s" ; fi ; done find . -type f \( -name config.guess.dh-orig -o -name config.sub.dh-orig \) -delete rm -rf debian/emboss_tmp find jemboss/ -type f -name "*.class" -delete [ ! -d debian/testbackup ] || ( rm -f --recursive test ; mv debian/testbackup test ) dh_clean --exclude=feattext.html~ config.status test-stamp install-stamp rm -f debian/debhelper-build-stamp rm -f debian/emboss.substvars rm -f debian/emboss.*.debhelper rm -rf debian/emboss/ rm -f debian/emboss-data.substvars rm -f debian/emboss-data.*.debhelper rm -rf debian/emboss-data/ rm -f debian/emboss-doc.substvars rm -f debian/emboss-doc.*.debhelper rm -rf debian/emboss-doc/ rm -f debian/emboss-test.substvars rm -f debian/emboss-test.*.debhelper rm -rf debian/emboss-test/ rm -f debian/emboss-lib.substvars rm -f debian/emboss-lib.*.debhelper rm -rf debian/emboss-lib/ rm -f debian/jemboss.substvars rm -f debian/jemboss.*.debhelper rm -rf debian/jemboss/ rm -rf debian/.debhelper/ rm -f debian/*.debhelper.log rm -f debian/files rm -f -- config.status test-stamp install-stamp find . ! \( -regex .\*feattext\\.html\~.\* \) -a \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) rm -f *-stamp rm -f jemboss/runJemboss.sh rm -f jemboss/utils/makeJar.csh rm -f jemboss/lib/jemboss.jar jemboss/resources/resources.jar jemboss/lib/activation.jar find test '(' -name 'Makefile' -o -name 'Makefile.in' ')' -delete rm -f config.guess make[1]: Leaving directory '/<>/emboss-6.6.0+dfsg' debian/rules build-arch dh build-arch --with autotools-dev,autoreconf dh_testdir -a dh_update_autotools_config -a install -d debian/.debhelper/bucket/files cp -an --reflink=auto config.sub debian/.debhelper/bucket/files/3cd488ca40af79af9b139188c440d64d3cf52eee56f4908907b61e12850646cf.tmp mv -f debian/.debhelper/bucket/files/3cd488ca40af79af9b139188c440d64d3cf52eee56f4908907b61e12850646cf.tmp debian/.debhelper/bucket/files/3cd488ca40af79af9b139188c440d64d3cf52eee56f4908907b61e12850646cf cp -f /usr/share/misc/config.sub ./config.sub dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} \; > debian/autoreconf.before autoreconf -f -i aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:21: installing './compile' configure.in:32: installing './config.guess' configure.in:29: installing './missing' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' ajax/acd/Makefile.am: installing './depcomp' find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} \; > debian/autoreconf.after dh_autotools-dev_updateconfig -a for c_g in `find -type f -name config.guess` ; do if ! test -e "$c_g.dh-orig" ; then mv -f "$c_g" "$c_g.dh-orig" ; cp -f /usr/share/misc/config.guess "$c_g" ; fi ; done for c_s in `find -type f -name config.sub` ; do if ! test -e "$c_s.dh-orig" ; then mv -f "$c_s" "$c_s.dh-orig" ; cp -f /usr/share/misc/config.sub "$c_s" ; fi ; done rm -f debian/*.debhelper.log debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/emboss-6.6.0+dfsg' dh_autotools-dev_updateconfig for c_g in `find -type f -name config.guess` ; do if ! test -e "$c_g.dh-orig" ; then mv -f "$c_g" "$c_g.dh-orig" ; cp -f /usr/share/misc/config.guess "$c_g" ; fi ; done for c_s in `find -type f -name config.sub` ; do if ! test -e "$c_s.dh-orig" ; then mv -f "$c_s" "$c_s.dh-orig" ; cp -f /usr/share/misc/config.sub "$c_s" ; fi ; done dh_auto_configure -- --bindir=/usr/lib/emboss --libdir=/usr/lib/emboss/lib --includedir=/usr/lib/emboss/include --enable-systemlibs --with-java=/usr/lib/jvm/default-java/include --with-javaos=/usr/lib/jvm/default-java/include/linux ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --libexecdir=\${prefix}/lib/i386-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --bindir=/usr/lib/emboss --libdir=/usr/lib/emboss/lib --includedir=/usr/lib/emboss/include --enable-systemlibs --with-java=/usr/lib/jvm/default-java/include --with-javaos=/usr/lib/jvm/default-java/include/linux configure: WARNING: unrecognized options: --disable-maintainer-mode checking for gawk... no checking for mawk... mawk checking for icc... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for icpc... no checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking how to run the C preprocessor... gcc -E checking for a BSD-compatible install... /usr/bin/install -c checking whether ln -s works... yes checking whether make sets $(MAKE)... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether build environment is sane... yes checking for style of include used by make... GNU checking whether make supports nested variables... yes checking dependency style of gcc... none checking dependency style of g++... none checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for ANSI C header files... (cached) yes checking for unistd.h... (cached) yes checking TargetConfig.h usability... no checking TargetConfig.h presence... no checking for TargetConfig.h... no checking whether byte ordering is bigendian... no checking for an ANSI C-conforming const... yes checking for inline... inline checking for pid_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking whether getpgrp requires zero arguments... yes checking for strftime... yes checking vfork.h usability... no checking vfork.h presence... no checking for vfork.h... no checking for fork... yes checking for vfork... yes checking for working fork... yes checking for working vfork... (cached) yes checking for vprintf... yes checking for _doprnt... no checking for memmove... yes checking X11/Xlib.h usability... yes checking X11/Xlib.h presence... yes checking for X11/Xlib.h... yes checking for socket in -lc... yes checking for main in -lm... yes checking if docroot is given... no checking if gcc profiling is selected... no checking if gcov coverage is selected... no checking for EMBOSS pre-indexed databases... yes checking for Java JNI... /usr/lib/jvm/default-java/include checking for Java JNI OS... /usr/lib/jvm/default-java/include/linux checking for authorisation type... no checking for threading type... no checking for ant... /usr/bin/ant checking for jar... /usr/bin/jar checking for java... /usr/bin/java checking for javac... /usr/bin/javac checking whether to look for pdf support... yes checking for HPDF_New in -lhpdf... yes PDF support found checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking whether to look for axis2c support... no checking if png driver is wanted... yes checking for inflateEnd in -lz... yes checking for png_destroy_read_struct in -lpng... yes checking for gdImageCreateFromPng in -lgd... yes PNG libraries found checking for mysql_config... /usr/bin/mysql_config checking for MySQL libraries... yes checking for pg_config... /usr/bin/pg_config checking for PostgreSQL libraries... yes checking for large file support... yes checking for purify... no checking for cygwin... no checking for savestats... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating ajax/Makefile config.status: creating ajax/acd/Makefile config.status: creating ajax/ajaxdb/Makefile config.status: creating ajax/core/Makefile config.status: creating ajax/ensembl/Makefile config.status: creating ajax/expat/Makefile config.status: creating ajax/graphics/Makefile config.status: creating ajax/pcre/Makefile config.status: creating ajax/zlib/Makefile config.status: creating doc/Makefile config.status: creating doc/manuals/Makefile config.status: creating doc/programs/Makefile config.status: creating doc/programs/html/Makefile config.status: creating doc/programs/text/Makefile config.status: creating doc/tutorials/Makefile config.status: creating emboss/Makefile config.status: creating emboss/acd/Makefile config.status: creating emboss/data/AAINDEX/Makefile config.status: creating emboss/data/CODONS/Makefile config.status: creating emboss/data/JASPAR_CNE/Makefile config.status: creating emboss/data/JASPAR_CORE/Makefile config.status: creating emboss/data/JASPAR_FAM/Makefile config.status: creating emboss/data/JASPAR_PBM/Makefile config.status: creating emboss/data/JASPAR_PBM_HLH/Makefile config.status: creating emboss/data/JASPAR_PBM_HOMEO/Makefile config.status: creating emboss/data/JASPAR_PHYLOFACTS/Makefile config.status: creating emboss/data/JASPAR_POLII/Makefile config.status: creating emboss/data/JASPAR_SPLICE/Makefile config.status: creating emboss/data/Makefile config.status: creating emboss/data/OBO/Makefile config.status: creating emboss/data/PRINTS/Makefile config.status: creating emboss/data/PROSITE/Makefile config.status: creating emboss/data/REBASE/Makefile config.status: creating emboss/data/TAXONOMY/Makefile config.status: creating emboss/index/Makefile config.status: creating jemboss/Makefile config.status: creating jemboss/runJemboss.sh config.status: creating jemboss/images/Makefile config.status: creating jemboss/lib/Makefile config.status: creating jemboss/lib/axis/Makefile config.status: creating jemboss/resources/Makefile config.status: creating jemboss/utils/Makefile config.status: creating nucleus/Makefile config.status: creating plplot/Makefile config.status: creating plplot/lib/Makefile config.status: creating test/Makefile config.status: creating test/data/Makefile config.status: creating test/embl/Makefile config.status: creating test/genbank/Makefile config.status: creating test/pir/Makefile config.status: creating test/swiss/Makefile config.status: creating test/swnew/Makefile config.status: creating test/testdb/Makefile config.status: creating ajax/core/config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/<>/emboss-6.6.0+dfsg' rm -f debian/*.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/<>/emboss-6.6.0+dfsg' dh_auto_build -- AJAX_FIXED_ROOT=\\\"/usr/share/EMBOSS\\\" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now" make -j4 AJAX_FIXED_ROOT=\\\"/usr/share/EMBOSS\\\" "CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2" "CFLAGS=-g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security" "LDFLAGS=-lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/<>/emboss-6.6.0+dfsg' Making all in plplot make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/plplot' Making all in lib make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/plplot/lib' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/plplot/lib' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/plplot' /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pdfutils.lo pdfutils.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plargs.lo plargs.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plbox.lo plbox.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plcont.lo plcont.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plargs.c -fPIC -DPIC -o .libs/plargs.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plbox.c -fPIC -DPIC -o .libs/plbox.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pdfutils.c -fPIC -DPIC -o .libs/pdfutils.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plcont.c -fPIC -DPIC -o .libs/plcont.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pdfutils.c -fPIE -o pdfutils.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plargs.c -fPIE -o plargs.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plcont.c -fPIE -o plcont.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plcore.lo plcore.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plctrl.lo plctrl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plcore.c -fPIC -DPIC -o .libs/plcore.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plbox.c -fPIE -o plbox.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plcvt.lo plcvt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plctrl.c -fPIC -DPIC -o .libs/plctrl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plcvt.c -fPIC -DPIC -o .libs/plcvt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plcvt.c -fPIE -o plcvt.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pldtik.lo pldtik.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plcore.c -fPIE -o plcore.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plfill.lo plfill.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pldtik.c -fPIC -DPIC -o .libs/pldtik.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plfill.c -fPIC -DPIC -o .libs/plfill.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pldtik.c -fPIE -o pldtik.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plctrl.c -fPIE -o plctrl.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plfill.c -fPIE -o plfill.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plhist.lo plhist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plhist.c -fPIC -DPIC -o .libs/plhist.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plline.lo plline.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plline.c -fPIC -DPIC -o .libs/plline.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plmap.lo plmap.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plhist.c -fPIE -o plhist.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plot3d.lo plot3d.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plmap.c -fPIC -DPIC -o .libs/plmap.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plpage.lo plpage.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plmap.c -fPIE -o plmap.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plline.c -fPIE -o plline.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plot3d.c -fPIC -DPIC -o .libs/plot3d.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plpage.c -fPIC -DPIC -o .libs/plpage.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plsdef.lo plsdef.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plpage.c -fPIE -o plpage.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plsdef.c -fPIC -DPIC -o .libs/plsdef.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plshade.lo plshade.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plsdef.c -fPIE -o plsdef.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plsym.lo plsym.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pltick.lo pltick.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plshade.c -fPIC -DPIC -o .libs/plshade.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plsym.c -fPIC -DPIC -o .libs/plsym.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pltick.c -fPIC -DPIC -o .libs/pltick.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pltick.c -fPIE -o pltick.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plshade.c -fPIE -o plshade.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plvpor.lo plvpor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plot3d.c -fPIE -o plot3d.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plvpor.c -fPIC -DPIC -o .libs/plvpor.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plsym.c -fPIE -o plsym.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plvpor.c -fPIE -o plvpor.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plwind.lo plwind.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plstripc.lo plstripc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plwind.c -fPIC -DPIC -o .libs/plwind.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o hpgl.lo hpgl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plstripc.c -fPIC -DPIC -o .libs/plstripc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plwind.c -fPIE -o plwind.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o impress.lo impress.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c hpgl.c -fPIC -DPIC -o .libs/hpgl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c hpgl.c -fPIE -o hpgl.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plstripc.c -fPIE -o plstripc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ljiip.lo ljiip.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c impress.c -fPIC -DPIC -o .libs/impress.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ljii.lo ljii.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o null.lo null.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c impress.c -fPIE -o impress.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o data.lo data.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ljiip.c -fPIC -DPIC -o .libs/ljiip.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ljii.c -fPIC -DPIC -o .libs/ljii.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c null.c -fPIC -DPIC -o .libs/null.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ljiip.c -fPIE -o ljiip.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c null.c -fPIE -o null.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pbm.lo pbm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c data.c -fPIC -DPIC -o .libs/data.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ljii.c -fPIE -o ljii.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plbuf.lo plbuf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c data.c -fPIE -o data.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plmeta.lo plmeta.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ps.lo ps.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pbm.c -fPIC -DPIC -o .libs/pbm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pbm.c -fPIE -o pbm.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plbuf.c -fPIC -DPIC -o .libs/plbuf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plmeta.c -fPIC -DPIC -o .libs/plmeta.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ps.c -fPIC -DPIC -o .libs/ps.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o tek.lo tek.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plmeta.c -fPIE -o plmeta.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plbuf.c -fPIE -o plbuf.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c tek.c -fPIC -DPIC -o .libs/tek.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o xfig.lo xfig.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ps.c -fPIE -o ps.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o xwin.lo xwin.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c tek.c -fPIE -o tek.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c xfig.c -fPIC -DPIC -o .libs/xfig.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c xwin.c -fPIC -DPIC -o .libs/xwin.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o gd.lo gd.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pdf.lo pdf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c xfig.c -fPIE -o xfig.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gd.c -fPIC -DPIC -o .libs/gd.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o svg.lo svg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pdf.c -fPIC -DPIC -o .libs/pdf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c svg.c -fPIC -DPIC -o .libs/svg.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gd.c -fPIE -o gd.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c xwin.c -fPIE -o xwin.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pdf.c -fPIE -o pdf.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plimage.lo plimage.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plstdio.lo plstdio.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c svg.c -fPIE -o svg.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plimage.c -fPIC -DPIC -o .libs/plimage.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plvect.lo plvect.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plstdio.c -fPIC -DPIC -o .libs/plstdio.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plstdio.c -fPIE -o plstdio.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plimage.c -fPIE -o plimage.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plvect.c -fPIC -DPIC -o .libs/plvect.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I./ -I/usr/include/gd -DPREFIX=\"/usr\" -DBUILD_DIR=\".\" -DDRV_DIR=\".\" -DEMBOSS_TOP=\"/<>/emboss-6.6.0+dfsg\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c plvect.c -fPIE -o plvect.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -version-info 5:7:2 -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o libeplplot.la -rpath /usr/lib/emboss/lib pdfutils.lo plargs.lo plbox.lo plcont.lo plcore.lo plctrl.lo plcvt.lo pldtik.lo plfill.lo plhist.lo plline.lo plmap.lo plot3d.lo plpage.lo plsdef.lo plshade.lo plsym.lo pltick.lo plvpor.lo plwind.lo plstripc.lo hpgl.lo impress.lo ljiip.lo ljii.lo null.lo data.lo pbm.lo plbuf.lo plmeta.lo ps.lo tek.lo xfig.lo xwin.lo gd.lo pdf.lo svg.lo plimage.lo plstdio.lo plvect.lo -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -shared -fPIC -DPIC .libs/pdfutils.o .libs/plargs.o .libs/plbox.o .libs/plcont.o .libs/plcore.o .libs/plctrl.o .libs/plcvt.o .libs/pldtik.o .libs/plfill.o .libs/plhist.o .libs/plline.o .libs/plmap.o .libs/plot3d.o .libs/plpage.o .libs/plsdef.o .libs/plshade.o .libs/plsym.o .libs/pltick.o .libs/plvpor.o .libs/plwind.o .libs/plstripc.o .libs/hpgl.o .libs/impress.o .libs/ljiip.o .libs/ljii.o .libs/null.o .libs/data.o .libs/pbm.o .libs/plbuf.o .libs/plmeta.o .libs/ps.o .libs/tek.o .libs/xfig.o .libs/xwin.o .libs/gd.o .libs/pdf.o .libs/svg.o .libs/plimage.o .libs/plstdio.o .libs/plvect.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq -lhpdf -lgd -lpng -lz -lm -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libeplplot.so.3 -o .libs/libeplplot.so.3.2.7 libtool: link: (cd ".libs" && rm -f "libeplplot.so.3" && ln -s "libeplplot.so.3.2.7" "libeplplot.so.3") libtool: link: (cd ".libs" && rm -f "libeplplot.so" && ln -s "libeplplot.so.3.2.7" "libeplplot.so") libtool: link: ar cru .libs/libeplplot.a pdfutils.o plargs.o plbox.o plcont.o plcore.o plctrl.o plcvt.o pldtik.o plfill.o plhist.o plline.o plmap.o plot3d.o plpage.o plsdef.o plshade.o plsym.o pltick.o plvpor.o plwind.o plstripc.o hpgl.o impress.o ljiip.o ljii.o null.o data.o pbm.o plbuf.o plmeta.o ps.o tek.o xfig.o xwin.o gd.o pdf.o svg.o plimage.o plstdio.o plvect.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libeplplot.a libtool: link: ( cd ".libs" && rm -f "libeplplot.la" && ln -s "../libeplplot.la" "libeplplot.la" ) make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/plplot' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/plplot' Making all in ajax make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax' Making all in pcre make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/pcre' /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_chartables.lo `test -f 'pcre_chartables.c' || echo './'`pcre_chartables.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_compile.lo `test -f 'pcre_compile.c' || echo './'`pcre_compile.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_dfa_exec.lo `test -f 'pcre_dfa_exec.c' || echo './'`pcre_dfa_exec.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_exec.lo `test -f 'pcre_exec.c' || echo './'`pcre_exec.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_dfa_exec.c -fPIC -DPIC -o .libs/libepcre_la-pcre_dfa_exec.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_exec.c -fPIC -DPIC -o .libs/libepcre_la-pcre_exec.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_chartables.c -fPIC -DPIC -o .libs/libepcre_la-pcre_chartables.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_compile.c -fPIC -DPIC -o .libs/libepcre_la-pcre_compile.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_chartables.c -fPIE -o libepcre_la-pcre_chartables.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_fullinfo.lo `test -f 'pcre_fullinfo.c' || echo './'`pcre_fullinfo.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_fullinfo.c -fPIC -DPIC -o .libs/libepcre_la-pcre_fullinfo.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_fullinfo.c -fPIE -o libepcre_la-pcre_fullinfo.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_get.lo `test -f 'pcre_get.c' || echo './'`pcre_get.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_get.c -fPIC -DPIC -o .libs/libepcre_la-pcre_get.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_get.c -fPIE -o libepcre_la-pcre_get.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_globals.lo `test -f 'pcre_globals.c' || echo './'`pcre_globals.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_globals.c -fPIC -DPIC -o .libs/libepcre_la-pcre_globals.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_globals.c -fPIE -o libepcre_la-pcre_globals.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_info.lo `test -f 'pcre_info.c' || echo './'`pcre_info.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_info.c -fPIC -DPIC -o .libs/libepcre_la-pcre_info.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_dfa_exec.c -fPIE -o libepcre_la-pcre_dfa_exec.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_exec.c -fPIE -o libepcre_la-pcre_exec.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_info.c -fPIE -o libepcre_la-pcre_info.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_newline.lo `test -f 'pcre_newline.c' || echo './'`pcre_newline.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_newline.c -fPIC -DPIC -o .libs/libepcre_la-pcre_newline.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_newline.c -fPIE -o libepcre_la-pcre_newline.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcreposix.lo `test -f 'pcreposix.c' || echo './'`pcreposix.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcreposix.c -fPIC -DPIC -o .libs/libepcre_la-pcreposix.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcreposix.c -fPIE -o libepcre_la-pcreposix.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_study.lo `test -f 'pcre_study.c' || echo './'`pcre_study.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_study.c -fPIC -DPIC -o .libs/libepcre_la-pcre_study.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_study.c -fPIE -o libepcre_la-pcre_study.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_compile.c -fPIE -o libepcre_la-pcre_compile.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_tables.lo `test -f 'pcre_tables.c' || echo './'`pcre_tables.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_tables.c -fPIC -DPIC -o .libs/libepcre_la-pcre_tables.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_tables.c -fPIE -o libepcre_la-pcre_tables.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_try_flipped.lo `test -f 'pcre_try_flipped.c' || echo './'`pcre_try_flipped.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_try_flipped.c -fPIC -DPIC -o .libs/libepcre_la-pcre_try_flipped.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_try_flipped.c -fPIE -o libepcre_la-pcre_try_flipped.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_version.lo `test -f 'pcre_version.c' || echo './'`pcre_version.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libepcre_la-pcre_xclass.lo `test -f 'pcre_xclass.c' || echo './'`pcre_xclass.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_version.c -fPIC -DPIC -o .libs/libepcre_la-pcre_version.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_xclass.c -fPIC -DPIC -o .libs/libepcre_la-pcre_xclass.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_version.c -fPIE -o libepcre_la-pcre_version.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -DPOSIX_MALLOC_THRESHOLD=10 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pcre_xclass.c -fPIE -o libepcre_la-pcre_xclass.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -version-info 7:9:0 -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o libepcre.la -rpath /usr/lib/emboss/lib libepcre_la-pcre_chartables.lo libepcre_la-pcre_compile.lo libepcre_la-pcre_dfa_exec.lo libepcre_la-pcre_exec.lo libepcre_la-pcre_fullinfo.lo libepcre_la-pcre_get.lo libepcre_la-pcre_globals.lo libepcre_la-pcre_info.lo libepcre_la-pcre_newline.lo libepcre_la-pcreposix.lo libepcre_la-pcre_study.lo libepcre_la-pcre_tables.lo libepcre_la-pcre_try_flipped.lo libepcre_la-pcre_version.lo libepcre_la-pcre_xclass.lo -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -shared -fPIC -DPIC .libs/libepcre_la-pcre_chartables.o .libs/libepcre_la-pcre_compile.o .libs/libepcre_la-pcre_dfa_exec.o .libs/libepcre_la-pcre_exec.o .libs/libepcre_la-pcre_fullinfo.o .libs/libepcre_la-pcre_get.o .libs/libepcre_la-pcre_globals.o .libs/libepcre_la-pcre_info.o .libs/libepcre_la-pcre_newline.o .libs/libepcre_la-pcreposix.o .libs/libepcre_la-pcre_study.o .libs/libepcre_la-pcre_tables.o .libs/libepcre_la-pcre_try_flipped.o .libs/libepcre_la-pcre_version.o .libs/libepcre_la-pcre_xclass.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq -lhpdf -lgd -lpng -lz -lm -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libepcre.so.7 -o .libs/libepcre.so.7.0.9 libtool: link: (cd ".libs" && rm -f "libepcre.so.7" && ln -s "libepcre.so.7.0.9" "libepcre.so.7") libtool: link: (cd ".libs" && rm -f "libepcre.so" && ln -s "libepcre.so.7.0.9" "libepcre.so") libtool: link: ar cru .libs/libepcre.a libepcre_la-pcre_chartables.o libepcre_la-pcre_compile.o libepcre_la-pcre_dfa_exec.o libepcre_la-pcre_exec.o libepcre_la-pcre_fullinfo.o libepcre_la-pcre_get.o libepcre_la-pcre_globals.o libepcre_la-pcre_info.o libepcre_la-pcre_newline.o libepcre_la-pcreposix.o libepcre_la-pcre_study.o libepcre_la-pcre_tables.o libepcre_la-pcre_try_flipped.o libepcre_la-pcre_version.o libepcre_la-pcre_xclass.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libepcre.a libtool: link: ( cd ".libs" && rm -f "libepcre.la" && ln -s "../libepcre.la" "libepcre.la" ) make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/pcre' Making all in core make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/core' make all-am make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/core' /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajalign.lo `test -f 'ajalign.c' || echo './'`ajalign.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajarr.lo `test -f 'ajarr.c' || echo './'`ajarr.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajassem.lo `test -f 'ajassem.c' || echo './'`ajassem.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajassemread.lo `test -f 'ajassemread.c' || echo './'`ajassemread.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajalign.c -fPIC -DPIC -o .libs/libajax_la-ajalign.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassem.c -fPIC -DPIC -o .libs/libajax_la-ajassem.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajarr.c -fPIC -DPIC -o .libs/libajax_la-ajarr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassemread.c -fPIC -DPIC -o .libs/libajax_la-ajassemread.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassem.c -fPIE -o libajax_la-ajassem.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajassemwrite.lo `test -f 'ajassemwrite.c' || echo './'`ajassemwrite.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassemwrite.c -fPIC -DPIC -o .libs/libajax_la-ajassemwrite.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassemread.c -fPIE -o libajax_la-ajassemread.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajarr.c -fPIE -o libajax_la-ajarr.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassemwrite.c -fPIE -o libajax_la-ajassemwrite.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajalign.c -fPIE -o libajax_la-ajalign.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajassert.lo `test -f 'ajassert.c' || echo './'`ajassert.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassert.c -fPIC -DPIC -o .libs/libajax_la-ajassert.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassert.c -fPIE -o libajax_la-ajassert.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajbamindex.lo `test -f 'ajbamindex.c' || echo './'`ajbamindex.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajbase.lo `test -f 'ajbase.c' || echo './'`ajbase.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajbamindex.c -fPIC -DPIC -o .libs/libajax_la-ajbamindex.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajbase.c -fPIC -DPIC -o .libs/libajax_la-ajbase.o ajbamindex.c: In function ‘bamIndexLoadCore’: ajbamindex.c:720:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(magic, 1, 4, fp); ^~~~~~~~~~~~~~~~~~~~~~ ajbamindex.c:731:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(&idx->n, 4, 1, fp); ^~~~~~~~~~~~~~~~~~~~~~~~ ajbamindex.c:747:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(&n_bin, 4, 1, fp); ^~~~~~~~~~~~~~~~~~~~~~~ ajbamindex.c:756:6: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(&binid, 4, 1, fp); ^~~~~~~~~~~~~~~~~~~~~~~ ajbamindex.c:765:6: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(&binlist->n, 4, 1, fp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ajbamindex.c:773:6: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(binlist->list, 16, binlist->n, fp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ajbamindex.c:799:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(&index2->n, 4, 1, fp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ ajbamindex.c:807:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(index2->offset, index2->n, 8, fp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajcall.lo `test -f 'ajcall.c' || echo './'`ajcall.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajbase.c -fPIE -o libajax_la-ajbase.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajcall.c -fPIC -DPIC -o .libs/libajax_la-ajcall.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajcall.c -fPIE -o libajax_la-ajcall.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajcigar.lo `test -f 'ajcigar.c' || echo './'`ajcigar.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajcod.lo `test -f 'ajcod.c' || echo './'`ajcod.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajbamindex.c -fPIE -o libajax_la-ajbamindex.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajdan.lo `test -f 'ajdan.c' || echo './'`ajdan.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajcigar.c -fPIC -DPIC -o .libs/libajax_la-ajcigar.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajcod.c -fPIC -DPIC -o .libs/libajax_la-ajcod.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajcigar.c -fPIE -o libajax_la-ajcigar.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdan.c -fPIC -DPIC -o .libs/libajax_la-ajdan.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajdmx.lo `test -f 'ajdmx.c' || echo './'`ajdmx.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdmx.c -fPIC -DPIC -o .libs/libajax_la-ajdmx.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdan.c -fPIE -o libajax_la-ajdan.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajdom.lo `test -f 'ajdom.c' || echo './'`ajdom.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdom.c -fPIC -DPIC -o .libs/libajax_la-ajdom.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajdomain.lo `test -f 'ajdomain.c' || echo './'`ajdomain.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdmx.c -fPIE -o libajax_la-ajdmx.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajcod.c -fPIE -o libajax_la-ajcod.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdomain.c -fPIC -DPIC -o .libs/libajax_la-ajdomain.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajexcept.lo `test -f 'ajexcept.c' || echo './'`ajexcept.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajexcept.c -fPIC -DPIC -o .libs/libajax_la-ajexcept.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajexcept.c -fPIE -o libajax_la-ajexcept.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajfeat.lo `test -f 'ajfeat.c' || echo './'`ajfeat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfeat.c -fPIC -DPIC -o .libs/libajax_la-ajfeat.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdomain.c -fPIE -o libajax_la-ajdomain.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajfeatread.lo `test -f 'ajfeatread.c' || echo './'`ajfeatread.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdom.c -fPIE -o libajax_la-ajdom.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfeatread.c -fPIC -DPIC -o .libs/libajax_la-ajfeatread.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajfeatwrite.lo `test -f 'ajfeatwrite.c' || echo './'`ajfeatwrite.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfeatwrite.c -fPIC -DPIC -o .libs/libajax_la-ajfeatwrite.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajfile.lo `test -f 'ajfile.c' || echo './'`ajfile.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfile.c -fPIC -DPIC -o .libs/libajax_la-ajfile.o ajfile.c: In function ‘ajFileNewListinPathWild’: ajfile.c:1527:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(dp,(struct dirent *)buf,&de) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFileNewListinPathWildExclude’: ajfile.c:1629:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(dp,(struct dirent *)buf,&de) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFilebuffNewPathWild’: ajfile.c:3222:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(dp,(struct dirent *)buf,&de) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFilebuffNewPathWildExclude’: ajfile.c:3325:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(dp,(struct dirent *)buf,&de) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFilewildnameExistsDir’: ajfile.c:7138:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(dp,(struct dirent *)buf,&de) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajDirnamePrintRecursiveIgnore’: ajfile.c:7475:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(indir,(struct dirent *)buf,&dp) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFilelistAddDirectory’: ajfile.c:7703:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(indir,(struct dirent *)buf,&dp) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFilelistAddPath’: ajfile.c:7876:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(indir,(struct dirent *)buf,&dp) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFilelistAddPathDir’: ajfile.c:7997:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(indir,(struct dirent *)buf,&dp) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFilelistAddPathWild’: ajfile.c:8106:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(indir,(struct dirent *)buf,&dp) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFilelistAddPathWildDir’: ajfile.c:8217:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(indir,(struct dirent *)buf,&dp) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFilelistAddPathWildRecursiveIgnore’: ajfile.c:8423:9: warning: ‘readdir_r’ is deprecated [-Wdeprecated-declarations] !readdir_r(indir,(struct dirent *)buf,&dp) ^ In file included from ajsys.h:61:0, from ajfile.c:36: /usr/include/dirent.h:183:12: note: declared here extern int readdir_r (DIR *__restrict __dirp, ^~~~~~~~~ ajfile.c: In function ‘ajFileSetEof’: ajfile.c:2408:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(&c, 1, 1, file->fp); ^~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfeatread.c -fPIE -o libajax_la-ajfeatread.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfeat.c -fPIE -o libajax_la-ajfeat.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfeatwrite.c -fPIE -o libajax_la-ajfeatwrite.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajfiledata.lo `test -f 'ajfiledata.c' || echo './'`ajfiledata.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfiledata.c -fPIC -DPIC -o .libs/libajax_la-ajfiledata.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfile.c -fPIE -o libajax_la-ajfile.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfiledata.c -fPIE -o libajax_la-ajfiledata.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajfileio.lo `test -f 'ajfileio.c' || echo './'`ajfileio.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfileio.c -fPIC -DPIC -o .libs/libajax_la-ajfileio.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajfmt.lo `test -f 'ajfmt.c' || echo './'`ajfmt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfileio.c -fPIE -o libajax_la-ajfileio.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajftp.lo `test -f 'ajftp.c' || echo './'`ajftp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfmt.c -fPIC -DPIC -o .libs/libajax_la-ajfmt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajftp.c -fPIC -DPIC -o .libs/libajax_la-ajftp.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajftp.c -fPIE -o libajax_la-ajftp.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajhttp.lo `test -f 'ajhttp.c' || echo './'`ajhttp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajhttp.c -fPIC -DPIC -o .libs/libajax_la-ajhttp.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajindex.lo `test -f 'ajindex.c' || echo './'`ajindex.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajhttp.c -fPIE -o libajax_la-ajhttp.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfmt.c -fPIE -o libajax_la-ajfmt.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajjava.lo `test -f 'ajjava.c' || echo './'`ajjava.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajindex.c -fPIC -DPIC -o .libs/libajax_la-ajindex.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajjava.c -fPIC -DPIC -o .libs/libajax_la-ajjava.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajjava.c -fPIE -o libajax_la-ajjava.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajlist.lo `test -f 'ajlist.c' || echo './'`ajlist.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajmath.lo `test -f 'ajmath.c' || echo './'`ajmath.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajlist.c -fPIC -DPIC -o .libs/libajax_la-ajlist.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmath.c -fPIC -DPIC -o .libs/libajax_la-ajmath.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmath.c -fPIE -o libajax_la-ajmath.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajmatrices.lo `test -f 'ajmatrices.c' || echo './'`ajmatrices.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmatrices.c -fPIC -DPIC -o .libs/libajax_la-ajmatrices.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajmem.lo `test -f 'ajmem.c' || echo './'`ajmem.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmem.c -fPIC -DPIC -o .libs/libajax_la-ajmem.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajlist.c -fPIE -o libajax_la-ajlist.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmem.c -fPIE -o libajax_la-ajmem.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmatrices.c -fPIE -o libajax_la-ajmatrices.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajmess.lo `test -f 'ajmess.c' || echo './'`ajmess.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmess.c -fPIC -DPIC -o .libs/libajax_la-ajmess.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajnam.lo `test -f 'ajnam.c' || echo './'`ajnam.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajnexus.lo `test -f 'ajnexus.c' || echo './'`ajnexus.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmess.c -fPIE -o libajax_la-ajmess.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajnam.c -fPIC -DPIC -o .libs/libajax_la-ajnam.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajnexus.c -fPIC -DPIC -o .libs/libajax_la-ajnexus.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajobo.lo `test -f 'ajobo.c' || echo './'`ajobo.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajobo.c -fPIC -DPIC -o .libs/libajax_la-ajobo.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajobo.c -fPIE -o libajax_la-ajobo.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajnexus.c -fPIE -o libajax_la-ajnexus.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajoboread.lo `test -f 'ajoboread.c' || echo './'`ajoboread.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajoboread.c -fPIC -DPIC -o .libs/libajax_la-ajoboread.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajobowrite.lo `test -f 'ajobowrite.c' || echo './'`ajobowrite.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajobowrite.c -fPIC -DPIC -o .libs/libajax_la-ajobowrite.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajoboread.c -fPIE -o libajax_la-ajoboread.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajnam.c -fPIE -o libajax_la-ajnam.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajobowrite.c -fPIE -o libajax_la-ajobowrite.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajpat.lo `test -f 'ajpat.c' || echo './'`ajpat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajpat.c -fPIC -DPIC -o .libs/libajax_la-ajpat.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajpat.c -fPIE -o libajax_la-ajpat.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajpdb.lo `test -f 'ajpdb.c' || echo './'`ajpdb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajpdb.c -fPIC -DPIC -o .libs/libajax_la-ajpdb.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajpdbio.lo `test -f 'ajpdbio.c' || echo './'`ajpdbio.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajpdbio.c -fPIC -DPIC -o .libs/libajax_la-ajpdbio.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajpdbio.c -fPIE -o libajax_la-ajpdbio.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajphylo.lo `test -f 'ajphylo.c' || echo './'`ajphylo.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajphylo.c -fPIC -DPIC -o .libs/libajax_la-ajphylo.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajpdb.c -fPIE -o libajax_la-ajpdb.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajindex.c -fPIE -o libajax_la-ajindex.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajphylo.c -fPIE -o libajax_la-ajphylo.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajquery.lo `test -f 'ajquery.c' || echo './'`ajquery.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajquery.c -fPIC -DPIC -o .libs/libajax_la-ajquery.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajrange.lo `test -f 'ajrange.c' || echo './'`ajrange.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrange.c -fPIC -DPIC -o .libs/libajax_la-ajrange.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajquery.c -fPIE -o libajax_la-ajquery.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajreg.lo `test -f 'ajreg.c' || echo './'`ajreg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrange.c -fPIE -o libajax_la-ajrange.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajreg.c -fPIC -DPIC -o .libs/libajax_la-ajreg.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajreport.lo `test -f 'ajreport.c' || echo './'`ajreport.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajreg.c -fPIE -o libajax_la-ajreg.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajreport.c -fPIC -DPIC -o .libs/libajax_la-ajreport.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajrefseq.lo `test -f 'ajrefseq.c' || echo './'`ajrefseq.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajrefseqread.lo `test -f 'ajrefseqread.c' || echo './'`ajrefseqread.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrefseq.c -fPIC -DPIC -o .libs/libajax_la-ajrefseq.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrefseq.c -fPIE -o libajax_la-ajrefseq.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrefseqread.c -fPIC -DPIC -o .libs/libajax_la-ajrefseqread.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajrefseqwrite.lo `test -f 'ajrefseqwrite.c' || echo './'`ajrefseqwrite.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrefseqwrite.c -fPIC -DPIC -o .libs/libajax_la-ajrefseqwrite.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrefseqwrite.c -fPIE -o libajax_la-ajrefseqwrite.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajresource.lo `test -f 'ajresource.c' || echo './'`ajresource.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajresource.c -fPIC -DPIC -o .libs/libajax_la-ajresource.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrefseqread.c -fPIE -o libajax_la-ajrefseqread.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajreport.c -fPIE -o libajax_la-ajreport.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajresource.c -fPIE -o libajax_la-ajresource.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajresourceread.lo `test -f 'ajresourceread.c' || echo './'`ajresourceread.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajresourcewrite.lo `test -f 'ajresourcewrite.c' || echo './'`ajresourcewrite.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajresourceread.c -fPIC -DPIC -o .libs/libajax_la-ajresourceread.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajresourcewrite.c -fPIC -DPIC -o .libs/libajax_la-ajresourcewrite.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajresourcewrite.c -fPIE -o libajax_la-ajresourcewrite.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajresourceread.c -fPIE -o libajax_la-ajresourceread.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajseq.lo `test -f 'ajseq.c' || echo './'`ajseq.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseq.c -fPIC -DPIC -o .libs/libajax_la-ajseq.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajseqabi.lo `test -f 'ajseqabi.c' || echo './'`ajseqabi.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajseqbam.lo `test -f 'ajseqbam.c' || echo './'`ajseqbam.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqabi.c -fPIC -DPIC -o .libs/libajax_la-ajseqabi.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqbam.c -fPIC -DPIC -o .libs/libajax_la-ajseqbam.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqabi.c -fPIE -o libajax_la-ajseqabi.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajseqread.lo `test -f 'ajseqread.c' || echo './'`ajseqread.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqbam.c -fPIE -o libajax_la-ajseqbam.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqread.c -fPIC -DPIC -o .libs/libajax_la-ajseqread.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseq.c -fPIE -o libajax_la-ajseq.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajseqtype.lo `test -f 'ajseqtype.c' || echo './'`ajseqtype.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqtype.c -fPIC -DPIC -o .libs/libajax_la-ajseqtype.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqtype.c -fPIE -o libajax_la-ajseqtype.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajseqwrite.lo `test -f 'ajseqwrite.c' || echo './'`ajseqwrite.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqwrite.c -fPIC -DPIC -o .libs/libajax_la-ajseqwrite.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajsort.lo `test -f 'ajsort.c' || echo './'`ajsort.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajsort.c -fPIC -DPIC -o .libs/libajax_la-ajsort.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajsql.lo `test -f 'ajsql.c' || echo './'`ajsql.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajsort.c -fPIE -o libajax_la-ajsort.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajsql.c -fPIC -DPIC -o .libs/libajax_la-ajsql.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajstr.lo `test -f 'ajstr.c' || echo './'`ajstr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajstr.c -fPIC -DPIC -o .libs/libajax_la-ajstr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajsql.c -fPIE -o libajax_la-ajsql.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajsys.lo `test -f 'ajsys.c' || echo './'`ajsys.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajsys.c -fPIC -DPIC -o .libs/libajax_la-ajsys.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajsys.c -fPIE -o libajax_la-ajsys.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtable.lo `test -f 'ajtable.c' || echo './'`ajtable.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqwrite.c -fPIE -o libajax_la-ajseqwrite.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtable.c -fPIC -DPIC -o .libs/libajax_la-ajtable.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqread.c -fPIE -o libajax_la-ajseqread.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajstr.c -fPIE -o libajax_la-ajstr.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtable.c -fPIE -o libajax_la-ajtable.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtagval.lo `test -f 'ajtagval.c' || echo './'`ajtagval.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtagval.c -fPIC -DPIC -o .libs/libajax_la-ajtagval.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtagval.c -fPIE -o libajax_la-ajtagval.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtax.lo `test -f 'ajtax.c' || echo './'`ajtax.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtax.c -fPIC -DPIC -o .libs/libajax_la-ajtax.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtaxread.lo `test -f 'ajtaxread.c' || echo './'`ajtaxread.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtax.c -fPIE -o libajax_la-ajtax.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtaxread.c -fPIC -DPIC -o .libs/libajax_la-ajtaxread.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtaxwrite.lo `test -f 'ajtaxwrite.c' || echo './'`ajtaxwrite.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtaxwrite.c -fPIC -DPIC -o .libs/libajax_la-ajtaxwrite.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtext.lo `test -f 'ajtext.c' || echo './'`ajtext.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtaxread.c -fPIE -o libajax_la-ajtaxread.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtaxwrite.c -fPIE -o libajax_la-ajtaxwrite.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtext.c -fPIC -DPIC -o .libs/libajax_la-ajtext.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtextread.lo `test -f 'ajtextread.c' || echo './'`ajtextread.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtext.c -fPIE -o libajax_la-ajtext.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtextread.c -fPIC -DPIC -o .libs/libajax_la-ajtextread.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtextwrite.lo `test -f 'ajtextwrite.c' || echo './'`ajtextwrite.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtime.lo `test -f 'ajtime.c' || echo './'`ajtime.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtime.c -fPIC -DPIC -o .libs/libajax_la-ajtime.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtextwrite.c -fPIC -DPIC -o .libs/libajax_la-ajtextwrite.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtextwrite.c -fPIE -o libajax_la-ajtextwrite.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtime.c -fPIE -o libajax_la-ajtime.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtranslate.lo `test -f 'ajtranslate.c' || echo './'`ajtranslate.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajtree.lo `test -f 'ajtree.c' || echo './'`ajtree.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtextread.c -fPIE -o libajax_la-ajtextread.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtranslate.c -fPIC -DPIC -o .libs/libajax_la-ajtranslate.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtree.c -fPIC -DPIC -o .libs/libajax_la-ajtree.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtree.c -fPIE -o libajax_la-ajtree.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtranslate.c -fPIE -o libajax_la-ajtranslate.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajurl.lo `test -f 'ajurl.c' || echo './'`ajurl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajurl.c -fPIC -DPIC -o .libs/libajax_la-ajurl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajurl.c -fPIE -o libajax_la-ajurl.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajurlread.lo `test -f 'ajurlread.c' || echo './'`ajurlread.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajurlwrite.lo `test -f 'ajurlwrite.c' || echo './'`ajurlwrite.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajutil.lo `test -f 'ajutil.c' || echo './'`ajutil.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajurlread.c -fPIC -DPIC -o .libs/libajax_la-ajurlread.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajurlwrite.c -fPIC -DPIC -o .libs/libajax_la-ajurlwrite.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajutil.c -fPIC -DPIC -o .libs/libajax_la-ajutil.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajvar.lo `test -f 'ajvar.c' || echo './'`ajvar.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajurlwrite.c -fPIE -o libajax_la-ajurlwrite.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajurlread.c -fPIE -o libajax_la-ajurlread.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajvarbcf.lo `test -f 'ajvarbcf.c' || echo './'`ajvarbcf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajutil.c -fPIE -o libajax_la-ajutil.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvar.c -fPIC -DPIC -o .libs/libajax_la-ajvar.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvarbcf.c -fPIC -DPIC -o .libs/libajax_la-ajvarbcf.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajvarread.lo `test -f 'ajvarread.c' || echo './'`ajvarread.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvar.c -fPIE -o libajax_la-ajvar.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajvarwrite.lo `test -f 'ajvarwrite.c' || echo './'`ajvarwrite.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvarbcf.c -fPIE -o libajax_la-ajvarbcf.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvarread.c -fPIC -DPIC -o .libs/libajax_la-ajvarread.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajvector.lo `test -f 'ajvector.c' || echo './'`ajvector.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajxml.lo `test -f 'ajxml.c' || echo './'`ajxml.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvarwrite.c -fPIC -DPIC -o .libs/libajax_la-ajvarwrite.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvector.c -fPIC -DPIC -o .libs/libajax_la-ajvector.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvector.c -fPIE -o libajax_la-ajvector.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajxml.c -fPIC -DPIC -o .libs/libajax_la-ajxml.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajxml.c -fPIE -o libajax_la-ajxml.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajxmlread.lo `test -f 'ajxmlread.c' || echo './'`ajxmlread.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajax_la-ajxmlwrite.lo `test -f 'ajxmlwrite.c' || echo './'`ajxmlwrite.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvarread.c -fPIE -o libajax_la-ajvarread.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajxmlwrite.c -fPIC -DPIC -o .libs/libajax_la-ajxmlwrite.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajxmlread.c -fPIC -DPIC -o .libs/libajax_la-ajxmlread.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvarwrite.c -fPIE -o libajax_la-ajvarwrite.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajxmlwrite.c -fPIE -o libajax_la-ajxmlwrite.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -I/usr/include/mysql -I/usr/include/postgresql -DAJAX_FIXED_ROOT=\"/usr/share/EMBOSS\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajxmlread.c -fPIE -o libajax_la-ajxmlread.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -version-info 6:5:0 -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -L/usr/lib/i386-linux-gnu -lpq -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o libajax.la -rpath /usr/lib/emboss/lib libajax_la-ajalign.lo libajax_la-ajarr.lo libajax_la-ajassem.lo libajax_la-ajassemread.lo libajax_la-ajassemwrite.lo libajax_la-ajassert.lo libajax_la-ajbamindex.lo libajax_la-ajbase.lo libajax_la-ajcall.lo libajax_la-ajcigar.lo libajax_la-ajcod.lo libajax_la-ajdan.lo libajax_la-ajdmx.lo libajax_la-ajdom.lo libajax_la-ajdomain.lo libajax_la-ajexcept.lo libajax_la-ajfeat.lo libajax_la-ajfeatread.lo libajax_la-ajfeatwrite.lo libajax_la-ajfile.lo libajax_la-ajfiledata.lo libajax_la-ajfileio.lo libajax_la-ajfmt.lo libajax_la-ajftp.lo libajax_la-ajhttp.lo libajax_la-ajindex.lo libajax_la-ajjava.lo libajax_la-ajlist.lo libajax_la-ajmath.lo libajax_la-ajmatrices.lo libajax_la-ajmem.lo libajax_la-ajmess.lo libajax_la-ajnam.lo libajax_la-ajnexus.lo libajax_la-ajobo.lo libajax_la-ajoboread.lo libajax_la-ajobowrite.lo libajax_la-ajpat.lo libajax_la-ajpdb.lo libajax_la-ajpdbio.lo libajax_la-ajphylo.lo libajax_la-ajquery.lo libajax_la-ajrange.lo libajax_la-ajreg.lo libajax_la-ajreport.lo libajax_la-ajrefseq.lo libajax_la-ajrefseqread.lo libajax_la-ajrefseqwrite.lo libajax_la-ajresource.lo libajax_la-ajresourceread.lo libajax_la-ajresourcewrite.lo libajax_la-ajseq.lo libajax_la-ajseqabi.lo libajax_la-ajseqbam.lo libajax_la-ajseqread.lo libajax_la-ajseqtype.lo libajax_la-ajseqwrite.lo libajax_la-ajsort.lo libajax_la-ajsql.lo libajax_la-ajstr.lo libajax_la-ajsys.lo libajax_la-ajtable.lo libajax_la-ajtagval.lo libajax_la-ajtax.lo libajax_la-ajtaxread.lo libajax_la-ajtaxwrite.lo libajax_la-ajtext.lo libajax_la-ajtextread.lo libajax_la-ajtextwrite.lo libajax_la-ajtime.lo libajax_la-ajtranslate.lo libajax_la-ajtree.lo libajax_la-ajurl.lo libajax_la-ajurlread.lo libajax_la-ajurlwrite.lo libajax_la-ajutil.lo libajax_la-ajvar.lo libajax_la-ajvarbcf.lo libajax_la-ajvarread.lo libajax_la-ajvarwrite.lo libajax_la-ajvector.lo libajax_la-ajxml.lo libajax_la-ajxmlread.lo libajax_la-ajxmlwrite.lo -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -shared -fPIC -DPIC .libs/libajax_la-ajalign.o .libs/libajax_la-ajarr.o .libs/libajax_la-ajassem.o .libs/libajax_la-ajassemread.o .libs/libajax_la-ajassemwrite.o .libs/libajax_la-ajassert.o .libs/libajax_la-ajbamindex.o .libs/libajax_la-ajbase.o .libs/libajax_la-ajcall.o .libs/libajax_la-ajcigar.o .libs/libajax_la-ajcod.o .libs/libajax_la-ajdan.o .libs/libajax_la-ajdmx.o .libs/libajax_la-ajdom.o .libs/libajax_la-ajdomain.o .libs/libajax_la-ajexcept.o .libs/libajax_la-ajfeat.o .libs/libajax_la-ajfeatread.o .libs/libajax_la-ajfeatwrite.o .libs/libajax_la-ajfile.o .libs/libajax_la-ajfiledata.o .libs/libajax_la-ajfileio.o .libs/libajax_la-ajfmt.o .libs/libajax_la-ajftp.o .libs/libajax_la-ajhttp.o .libs/libajax_la-ajindex.o .libs/libajax_la-ajjava.o .libs/libajax_la-ajlist.o .libs/libajax_la-ajmath.o .libs/libajax_la-ajmatrices.o .libs/libajax_la-ajmem.o .libs/libajax_la-ajmess.o .libs/libajax_la-ajnam.o .libs/libajax_la-ajnexus.o .libs/libajax_la-ajobo.o .libs/libajax_la-ajoboread.o .libs/libajax_la-ajobowrite.o .libs/libajax_la-ajpat.o .libs/libajax_la-ajpdb.o .libs/libajax_la-ajpdbio.o .libs/libajax_la-ajphylo.o .libs/libajax_la-ajquery.o .libs/libajax_la-ajrange.o .libs/libajax_la-ajreg.o .libs/libajax_la-ajreport.o .libs/libajax_la-ajrefseq.o .libs/libajax_la-ajrefseqread.o .libs/libajax_la-ajrefseqwrite.o .libs/libajax_la-ajresource.o .libs/libajax_la-ajresourceread.o .libs/libajax_la-ajresourcewrite.o .libs/libajax_la-ajseq.o .libs/libajax_la-ajseqabi.o .libs/libajax_la-ajseqbam.o .libs/libajax_la-ajseqread.o .libs/libajax_la-ajseqtype.o .libs/libajax_la-ajseqwrite.o .libs/libajax_la-ajsort.o .libs/libajax_la-ajsql.o .libs/libajax_la-ajstr.o .libs/libajax_la-ajsys.o .libs/libajax_la-ajtable.o .libs/libajax_la-ajtagval.o .libs/libajax_la-ajtax.o .libs/libajax_la-ajtaxread.o .libs/libajax_la-ajtaxwrite.o .libs/libajax_la-ajtext.o .libs/libajax_la-ajtextread.o .libs/libajax_la-ajtextwrite.o .libs/libajax_la-ajtime.o .libs/libajax_la-ajtranslate.o .libs/libajax_la-ajtree.o .libs/libajax_la-ajurl.o .libs/libajax_la-ajurlread.o .libs/libajax_la-ajurlwrite.o .libs/libajax_la-ajutil.o .libs/libajax_la-ajvar.o .libs/libajax_la-ajvarbcf.o .libs/libajax_la-ajvarread.o .libs/libajax_la-ajvarwrite.o .libs/libajax_la-ajvector.o .libs/libajax_la-ajxml.o .libs/libajax_la-ajxmlread.o .libs/libajax_la-ajxmlwrite.o -L/usr/lib/i386-linux-gnu /usr/lib/i386-linux-gnu/libexpat.so -lmysqlclient -lpthread -lrt -latomic -ldl -lpq -lhpdf -lgd -lpng -lz -lm -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libajax.so.6 -o .libs/libajax.so.6.0.5 libtool: link: (cd ".libs" && rm -f "libajax.so.6" && ln -s "libajax.so.6.0.5" "libajax.so.6") libtool: link: (cd ".libs" && rm -f "libajax.so" && ln -s "libajax.so.6.0.5" "libajax.so") libtool: link: ar cru .libs/libajax.a libajax_la-ajalign.o libajax_la-ajarr.o libajax_la-ajassem.o libajax_la-ajassemread.o libajax_la-ajassemwrite.o libajax_la-ajassert.o libajax_la-ajbamindex.o libajax_la-ajbase.o libajax_la-ajcall.o libajax_la-ajcigar.o libajax_la-ajcod.o libajax_la-ajdan.o libajax_la-ajdmx.o libajax_la-ajdom.o libajax_la-ajdomain.o libajax_la-ajexcept.o libajax_la-ajfeat.o libajax_la-ajfeatread.o libajax_la-ajfeatwrite.o libajax_la-ajfile.o libajax_la-ajfiledata.o libajax_la-ajfileio.o libajax_la-ajfmt.o libajax_la-ajftp.o libajax_la-ajhttp.o libajax_la-ajindex.o libajax_la-ajjava.o libajax_la-ajlist.o libajax_la-ajmath.o libajax_la-ajmatrices.o libajax_la-ajmem.o libajax_la-ajmess.o libajax_la-ajnam.o libajax_la-ajnexus.o libajax_la-ajobo.o libajax_la-ajoboread.o libajax_la-ajobowrite.o libajax_la-ajpat.o libajax_la-ajpdb.o libajax_la-ajpdbio.o libajax_la-ajphylo.o libajax_la-ajquery.o libajax_la-ajrange.o libajax_la-ajreg.o libajax_la-ajreport.o libajax_la-ajrefseq.o libajax_la-ajrefseqread.o libajax_la-ajrefseqwrite.o libajax_la-ajresource.o libajax_la-ajresourceread.o libajax_la-ajresourcewrite.o libajax_la-ajseq.o libajax_la-ajseqabi.o libajax_la-ajseqbam.o libajax_la-ajseqread.o libajax_la-ajseqtype.o libajax_la-ajseqwrite.o libajax_la-ajsort.o libajax_la-ajsql.o libajax_la-ajstr.o libajax_la-ajsys.o libajax_la-ajtable.o libajax_la-ajtagval.o libajax_la-ajtax.o libajax_la-ajtaxread.o libajax_la-ajtaxwrite.o libajax_la-ajtext.o libajax_la-ajtextread.o libajax_la-ajtextwrite.o libajax_la-ajtime.o libajax_la-ajtranslate.o libajax_la-ajtree.o libajax_la-ajurl.o libajax_la-ajurlread.o libajax_la-ajurlwrite.o libajax_la-ajutil.o libajax_la-ajvar.o libajax_la-ajvarbcf.o libajax_la-ajvarread.o libajax_la-ajvarwrite.o libajax_la-ajvector.o libajax_la-ajxml.o libajax_la-ajxmlread.o libajax_la-ajxmlwrite.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libajax.a libtool: link: ( cd ".libs" && rm -f "libajax.la" && ln -s "../libajax.la" "libajax.la" ) make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/core' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/core' Making all in graphics make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/graphics' /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxg_la-ajgraph.lo `test -f 'ajgraph.c' || echo './'`ajgraph.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxg_la-ajhist.lo `test -f 'ajhist.c' || echo './'`ajhist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajgraph.c -fPIC -DPIC -o .libs/libajaxg_la-ajgraph.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajhist.c -fPIC -DPIC -o .libs/libajaxg_la-ajhist.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajhist.c -fPIE -o libajaxg_la-ajhist.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajgraph.c -fPIE -o libajaxg_la-ajgraph.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -version-info 6:5:0 -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o libajaxg.la -rpath /usr/lib/emboss/lib libajaxg_la-ajgraph.lo libajaxg_la-ajhist.lo -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -shared -fPIC -DPIC .libs/libajaxg_la-ajgraph.o .libs/libajaxg_la-ajhist.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq -lhpdf -lgd -lpng -lz -lm -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libajaxg.so.6 -o .libs/libajaxg.so.6.0.5 libtool: link: (cd ".libs" && rm -f "libajaxg.so.6" && ln -s "libajaxg.so.6.0.5" "libajaxg.so.6") libtool: link: (cd ".libs" && rm -f "libajaxg.so" && ln -s "libajaxg.so.6.0.5" "libajaxg.so") libtool: link: ar cru .libs/libajaxg.a libajaxg_la-ajgraph.o libajaxg_la-ajhist.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libajaxg.a libtool: link: ( cd ".libs" && rm -f "libajaxg.la" && ln -s "../libajaxg.la" "libajaxg.la" ) make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/graphics' Making all in ensembl make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/ensembl' /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensalign.lo `test -f 'ensalign.c' || echo './'`ensalign.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensanalysis.lo `test -f 'ensanalysis.c' || echo './'`ensanalysis.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensassembly.lo `test -f 'ensassembly.c' || echo './'`ensassembly.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensassemblyexception.lo `test -f 'ensassemblyexception.c' || echo './'`ensassemblyexception.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensalign.c -fPIC -DPIC -o .libs/libensembl_la-ensalign.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensassembly.c -fPIC -DPIC -o .libs/libensembl_la-ensassembly.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensanalysis.c -fPIC -DPIC -o .libs/libensembl_la-ensanalysis.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensassemblyexception.c -fPIC -DPIC -o .libs/libensembl_la-ensassemblyexception.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensassembly.c -fPIE -o libensembl_la-ensassembly.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensassemblymapper.lo `test -f 'ensassemblymapper.c' || echo './'`ensassemblymapper.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensassemblymapper.c -fPIC -DPIC -o .libs/libensembl_la-ensassemblymapper.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensassemblyexception.c -fPIE -o libensembl_la-ensassemblyexception.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensanalysis.c -fPIE -o libensembl_la-ensanalysis.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensalign.c -fPIE -o libensembl_la-ensalign.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensattribute.lo `test -f 'ensattribute.c' || echo './'`ensattribute.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensbaseadaptor.lo `test -f 'ensbaseadaptor.c' || echo './'`ensbaseadaptor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensbaseadaptor.c -fPIC -DPIC -o .libs/libensembl_la-ensbaseadaptor.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensattribute.c -fPIC -DPIC -o .libs/libensembl_la-ensattribute.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enscache.lo `test -f 'enscache.c' || echo './'`enscache.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensattribute.c -fPIE -o libensembl_la-ensattribute.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enscache.c -fPIC -DPIC -o .libs/libensembl_la-enscache.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensbaseadaptor.c -fPIE -o libensembl_la-ensbaseadaptor.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enscache.c -fPIE -o libensembl_la-enscache.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enscoordsystem.lo `test -f 'enscoordsystem.c' || echo './'`enscoordsystem.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enscoordsystem.c -fPIC -DPIC -o .libs/libensembl_la-enscoordsystem.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensassemblymapper.c -fPIE -o libensembl_la-ensassemblymapper.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensdatabaseadaptor.lo `test -f 'ensdatabaseadaptor.c' || echo './'`ensdatabaseadaptor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensdatabaseadaptor.c -fPIC -DPIC -o .libs/libensembl_la-ensdatabaseadaptor.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensdatabaseconnection.lo `test -f 'ensdatabaseconnection.c' || echo './'`ensdatabaseconnection.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensdatabaseconnection.c -fPIC -DPIC -o .libs/libensembl_la-ensdatabaseconnection.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enscoordsystem.c -fPIE -o libensembl_la-enscoordsystem.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensdatabaseadaptor.c -fPIE -o libensembl_la-ensdatabaseadaptor.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensdatabaseconnection.c -fPIE -o libensembl_la-ensdatabaseconnection.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensdatabaseentry.lo `test -f 'ensdatabaseentry.c' || echo './'`ensdatabaseentry.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensdensity.lo `test -f 'ensdensity.c' || echo './'`ensdensity.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensdensity.c -fPIC -DPIC -o .libs/libensembl_la-ensdensity.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensdatabaseentry.c -fPIC -DPIC -o .libs/libensembl_la-ensdatabaseentry.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensditag.lo `test -f 'ensditag.c' || echo './'`ensditag.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensditag.c -fPIC -DPIC -o .libs/libensembl_la-ensditag.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensdensity.c -fPIE -o libensembl_la-ensdensity.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensditag.c -fPIE -o libensembl_la-ensditag.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensexon.lo `test -f 'ensexon.c' || echo './'`ensexon.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensexon.c -fPIC -DPIC -o .libs/libensembl_la-ensexon.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensexternaldatabase.lo `test -f 'ensexternaldatabase.c' || echo './'`ensexternaldatabase.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensexternaldatabase.c -fPIC -DPIC -o .libs/libensembl_la-ensexternaldatabase.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensfeature.lo `test -f 'ensfeature.c' || echo './'`ensfeature.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensfeature.c -fPIC -DPIC -o .libs/libensembl_la-ensfeature.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensdatabaseentry.c -fPIE -o libensembl_la-ensdatabaseentry.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensexon.c -fPIE -o libensembl_la-ensexon.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensexternaldatabase.c -fPIE -o libensembl_la-ensexternaldatabase.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgene.lo `test -f 'ensgene.c' || echo './'`ensgene.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgene.c -fPIC -DPIC -o .libs/libensembl_la-ensgene.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvallele.lo `test -f 'ensgvallele.c' || echo './'`ensgvallele.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvallele.c -fPIC -DPIC -o .libs/libensembl_la-ensgvallele.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensfeature.c -fPIE -o libensembl_la-ensfeature.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvattribute.lo `test -f 'ensgvattribute.c' || echo './'`ensgvattribute.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvattribute.c -fPIC -DPIC -o .libs/libensembl_la-ensgvattribute.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvallele.c -fPIE -o libensembl_la-ensgvallele.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgene.c -fPIE -o libensembl_la-ensgene.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvbaseadaptor.lo `test -f 'ensgvbaseadaptor.c' || echo './'`ensgvbaseadaptor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvattribute.c -fPIE -o libensembl_la-ensgvattribute.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvbaseadaptor.c -fPIC -DPIC -o .libs/libensembl_la-ensgvbaseadaptor.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvbaseadaptor.c -fPIE -o libensembl_la-ensgvbaseadaptor.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvdatabaseadaptor.lo `test -f 'ensgvdatabaseadaptor.c' || echo './'`ensgvdatabaseadaptor.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvgenotype.lo `test -f 'ensgvgenotype.c' || echo './'`ensgvgenotype.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvgenotype.c -fPIC -DPIC -o .libs/libensembl_la-ensgvgenotype.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvdatabaseadaptor.c -fPIC -DPIC -o .libs/libensembl_la-ensgvdatabaseadaptor.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvindividual.lo `test -f 'ensgvindividual.c' || echo './'`ensgvindividual.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvdatabaseadaptor.c -fPIE -o libensembl_la-ensgvdatabaseadaptor.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvindividual.c -fPIC -DPIC -o .libs/libensembl_la-ensgvindividual.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvgenotype.c -fPIE -o libensembl_la-ensgvgenotype.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvpopulation.lo `test -f 'ensgvpopulation.c' || echo './'`ensgvpopulation.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvpopulation.c -fPIC -DPIC -o .libs/libensembl_la-ensgvpopulation.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvindividual.c -fPIE -o libensembl_la-ensgvindividual.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvsample.lo `test -f 'ensgvsample.c' || echo './'`ensgvsample.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvsource.lo `test -f 'ensgvsource.c' || echo './'`ensgvsource.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvsample.c -fPIC -DPIC -o .libs/libensembl_la-ensgvsample.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvsource.c -fPIC -DPIC -o .libs/libensembl_la-ensgvsource.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvpopulation.c -fPIE -o libensembl_la-ensgvpopulation.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvsample.c -fPIE -o libensembl_la-ensgvsample.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvsynonym.lo `test -f 'ensgvsynonym.c' || echo './'`ensgvsynonym.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvsynonym.c -fPIC -DPIC -o .libs/libensembl_la-ensgvsynonym.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensgvvariation.lo `test -f 'ensgvvariation.c' || echo './'`ensgvvariation.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvvariation.c -fPIC -DPIC -o .libs/libensembl_la-ensgvvariation.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvsource.c -fPIE -o libensembl_la-ensgvsource.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensintron.lo `test -f 'ensintron.c' || echo './'`ensintron.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvsynonym.c -fPIE -o libensembl_la-ensgvsynonym.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensintron.c -fPIC -DPIC -o .libs/libensembl_la-ensintron.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enskaryotype.lo `test -f 'enskaryotype.c' || echo './'`enskaryotype.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensmapper.lo `test -f 'ensmapper.c' || echo './'`ensmapper.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enskaryotype.c -fPIC -DPIC -o .libs/libensembl_la-enskaryotype.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensintron.c -fPIE -o libensembl_la-ensintron.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmapper.c -fPIC -DPIC -o .libs/libensembl_la-ensmapper.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensmarker.lo `test -f 'ensmarker.c' || echo './'`ensmarker.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enskaryotype.c -fPIE -o libensembl_la-enskaryotype.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmarker.c -fPIC -DPIC -o .libs/libensembl_la-ensmarker.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensmetacoordinate.lo `test -f 'ensmetacoordinate.c' || echo './'`ensmetacoordinate.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensgvvariation.c -fPIE -o libensembl_la-ensgvvariation.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmetacoordinate.c -fPIC -DPIC -o .libs/libensembl_la-ensmetacoordinate.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmapper.c -fPIE -o libensembl_la-ensmapper.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmetacoordinate.c -fPIE -o libensembl_la-ensmetacoordinate.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmarker.c -fPIE -o libensembl_la-ensmarker.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensmetainformation.lo `test -f 'ensmetainformation.c' || echo './'`ensmetainformation.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmetainformation.c -fPIC -DPIC -o .libs/libensembl_la-ensmetainformation.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensmiscellaneous.lo `test -f 'ensmiscellaneous.c' || echo './'`ensmiscellaneous.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmetainformation.c -fPIE -o libensembl_la-ensmetainformation.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmiscellaneous.c -fPIC -DPIC -o .libs/libensembl_la-ensmiscellaneous.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensontology.lo `test -f 'ensontology.c' || echo './'`ensontology.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensontology.c -fPIC -DPIC -o .libs/libensembl_la-ensontology.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensoperon.lo `test -f 'ensoperon.c' || echo './'`ensoperon.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensoperon.c -fPIC -DPIC -o .libs/libensembl_la-ensoperon.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensprediction.lo `test -f 'ensprediction.c' || echo './'`ensprediction.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensprediction.c -fPIC -DPIC -o .libs/libensembl_la-ensprediction.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensmiscellaneous.c -fPIE -o libensembl_la-ensmiscellaneous.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensoperon.c -fPIE -o libensembl_la-ensoperon.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensontology.c -fPIE -o libensembl_la-ensontology.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensprediction.c -fPIE -o libensembl_la-ensprediction.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensprojectionsegment.lo `test -f 'ensprojectionsegment.c' || echo './'`ensprojectionsegment.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensprotein.lo `test -f 'ensprotein.c' || echo './'`ensprotein.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensprojectionsegment.c -fPIC -DPIC -o .libs/libensembl_la-ensprojectionsegment.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensprotein.c -fPIC -DPIC -o .libs/libensembl_la-ensprotein.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensprojectionsegment.c -fPIE -o libensembl_la-ensprojectionsegment.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensqc.lo `test -f 'ensqc.c' || echo './'`ensqc.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensqcalignment.lo `test -f 'ensqcalignment.c' || echo './'`ensqcalignment.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqc.c -fPIC -DPIC -o .libs/libensembl_la-ensqc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcalignment.c -fPIC -DPIC -o .libs/libensembl_la-ensqcalignment.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensprotein.c -fPIE -o libensembl_la-ensprotein.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensqcdasfeature.lo `test -f 'ensqcdasfeature.c' || echo './'`ensqcdasfeature.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqc.c -fPIE -o libensembl_la-ensqc.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcdasfeature.c -fPIC -DPIC -o .libs/libensembl_la-ensqcdasfeature.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensqcdatabase.lo `test -f 'ensqcdatabase.c' || echo './'`ensqcdatabase.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcdatabase.c -fPIC -DPIC -o .libs/libensembl_la-ensqcdatabase.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensqcsequence.lo `test -f 'ensqcsequence.c' || echo './'`ensqcsequence.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcsequence.c -fPIC -DPIC -o .libs/libensembl_la-ensqcsequence.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcdasfeature.c -fPIE -o libensembl_la-ensqcdasfeature.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcalignment.c -fPIE -o libensembl_la-ensqcalignment.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcdatabase.c -fPIE -o libensembl_la-ensqcdatabase.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensqcsubmission.lo `test -f 'ensqcsubmission.c' || echo './'`ensqcsubmission.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcsequence.c -fPIE -o libensembl_la-ensqcsequence.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcsubmission.c -fPIC -DPIC -o .libs/libensembl_la-ensqcsubmission.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcsubmission.c -fPIE -o libensembl_la-ensqcsubmission.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensqcvariation.lo `test -f 'ensqcvariation.c' || echo './'`ensqcvariation.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensregistry.lo `test -f 'ensregistry.c' || echo './'`ensregistry.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcvariation.c -fPIC -DPIC -o .libs/libensembl_la-ensqcvariation.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensregistry.c -fPIC -DPIC -o .libs/libensembl_la-ensregistry.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensrepeat.lo `test -f 'ensrepeat.c' || echo './'`ensrepeat.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensseqregion.lo `test -f 'ensseqregion.c' || echo './'`ensseqregion.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensrepeat.c -fPIC -DPIC -o .libs/libensembl_la-ensrepeat.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensseqregion.c -fPIC -DPIC -o .libs/libensembl_la-ensseqregion.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensqcvariation.c -fPIE -o libensembl_la-ensqcvariation.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensrepeat.c -fPIE -o libensembl_la-ensrepeat.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensseqregion.c -fPIE -o libensembl_la-ensseqregion.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enssequence.lo `test -f 'enssequence.c' || echo './'`enssequence.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enssequence.c -fPIC -DPIC -o .libs/libensembl_la-enssequence.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensregistry.c -fPIE -o libensembl_la-ensregistry.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enssequenceedit.lo `test -f 'enssequenceedit.c' || echo './'`enssequenceedit.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enssequenceedit.c -fPIC -DPIC -o .libs/libensembl_la-enssequenceedit.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enssequence.c -fPIE -o libensembl_la-enssequence.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enssimple.lo `test -f 'enssimple.c' || echo './'`enssimple.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enssimple.c -fPIC -DPIC -o .libs/libensembl_la-enssimple.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enssequenceedit.c -fPIE -o libensembl_la-enssequenceedit.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enssimple.c -fPIE -o libensembl_la-enssimple.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensslice.lo `test -f 'ensslice.c' || echo './'`ensslice.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enssoftware.lo `test -f 'enssoftware.c' || echo './'`enssoftware.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensslice.c -fPIC -DPIC -o .libs/libensembl_la-ensslice.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enssoftware.c -fPIC -DPIC -o .libs/libensembl_la-enssoftware.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensstorable.lo `test -f 'ensstorable.c' || echo './'`ensstorable.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensstorable.c -fPIC -DPIC -o .libs/libensembl_la-ensstorable.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensstorable.c -fPIE -o libensembl_la-ensstorable.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enssoftware.c -fPIE -o libensembl_la-enssoftware.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enstable.lo `test -f 'enstable.c' || echo './'`enstable.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enstranscript.lo `test -f 'enstranscript.c' || echo './'`enstranscript.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enstranscript.c -fPIC -DPIC -o .libs/libensembl_la-enstranscript.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enstable.c -fPIC -DPIC -o .libs/libensembl_la-enstable.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-enstranslation.lo `test -f 'enstranslation.c' || echo './'`enstranslation.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enstranslation.c -fPIC -DPIC -o .libs/libensembl_la-enstranslation.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enstable.c -fPIE -o libensembl_la-enstable.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensutility.lo `test -f 'ensutility.c' || echo './'`ensutility.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensutility.c -fPIC -DPIC -o .libs/libensembl_la-ensutility.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enstranslation.c -fPIE -o libensembl_la-enstranslation.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensutility.c -fPIE -o libensembl_la-ensutility.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libensembl_la-ensvariation.lo `test -f 'ensvariation.c' || echo './'`ensvariation.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensslice.c -fPIE -o libensembl_la-ensslice.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensvariation.c -fPIC -DPIC -o .libs/libensembl_la-ensvariation.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ensvariation.c -fPIE -o libensembl_la-ensvariation.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c enstranscript.c -fPIE -o libensembl_la-enstranscript.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -version-info 6:5:0 -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o libensembl.la -rpath /usr/lib/emboss/lib libensembl_la-ensalign.lo libensembl_la-ensanalysis.lo libensembl_la-ensassembly.lo libensembl_la-ensassemblyexception.lo libensembl_la-ensassemblymapper.lo libensembl_la-ensattribute.lo libensembl_la-ensbaseadaptor.lo libensembl_la-enscache.lo libensembl_la-enscoordsystem.lo libensembl_la-ensdatabaseadaptor.lo libensembl_la-ensdatabaseconnection.lo libensembl_la-ensdatabaseentry.lo libensembl_la-ensdensity.lo libensembl_la-ensditag.lo libensembl_la-ensexon.lo libensembl_la-ensexternaldatabase.lo libensembl_la-ensfeature.lo libensembl_la-ensgene.lo libensembl_la-ensgvallele.lo libensembl_la-ensgvattribute.lo libensembl_la-ensgvbaseadaptor.lo libensembl_la-ensgvdatabaseadaptor.lo libensembl_la-ensgvgenotype.lo libensembl_la-ensgvindividual.lo libensembl_la-ensgvpopulation.lo libensembl_la-ensgvsample.lo libensembl_la-ensgvsource.lo libensembl_la-ensgvsynonym.lo libensembl_la-ensgvvariation.lo libensembl_la-ensintron.lo libensembl_la-enskaryotype.lo libensembl_la-ensmapper.lo libensembl_la-ensmarker.lo libensembl_la-ensmetacoordinate.lo libensembl_la-ensmetainformation.lo libensembl_la-ensmiscellaneous.lo libensembl_la-ensontology.lo libensembl_la-ensoperon.lo libensembl_la-ensprediction.lo libensembl_la-ensprojectionsegment.lo libensembl_la-ensprotein.lo libensembl_la-ensqc.lo libensembl_la-ensqcalignment.lo libensembl_la-ensqcdasfeature.lo libensembl_la-ensqcdatabase.lo libensembl_la-ensqcsequence.lo libensembl_la-ensqcsubmission.lo libensembl_la-ensqcvariation.lo libensembl_la-ensregistry.lo libensembl_la-ensrepeat.lo libensembl_la-ensseqregion.lo libensembl_la-enssequence.lo libensembl_la-enssequenceedit.lo libensembl_la-enssimple.lo libensembl_la-ensslice.lo libensembl_la-enssoftware.lo libensembl_la-ensstorable.lo libensembl_la-enstable.lo libensembl_la-enstranscript.lo libensembl_la-enstranslation.lo libensembl_la-ensutility.lo libensembl_la-ensvariation.lo -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -shared -fPIC -DPIC .libs/libensembl_la-ensalign.o .libs/libensembl_la-ensanalysis.o .libs/libensembl_la-ensassembly.o .libs/libensembl_la-ensassemblyexception.o .libs/libensembl_la-ensassemblymapper.o .libs/libensembl_la-ensattribute.o .libs/libensembl_la-ensbaseadaptor.o .libs/libensembl_la-enscache.o .libs/libensembl_la-enscoordsystem.o .libs/libensembl_la-ensdatabaseadaptor.o .libs/libensembl_la-ensdatabaseconnection.o .libs/libensembl_la-ensdatabaseentry.o .libs/libensembl_la-ensdensity.o .libs/libensembl_la-ensditag.o .libs/libensembl_la-ensexon.o .libs/libensembl_la-ensexternaldatabase.o .libs/libensembl_la-ensfeature.o .libs/libensembl_la-ensgene.o .libs/libensembl_la-ensgvallele.o .libs/libensembl_la-ensgvattribute.o .libs/libensembl_la-ensgvbaseadaptor.o .libs/libensembl_la-ensgvdatabaseadaptor.o .libs/libensembl_la-ensgvgenotype.o .libs/libensembl_la-ensgvindividual.o .libs/libensembl_la-ensgvpopulation.o .libs/libensembl_la-ensgvsample.o .libs/libensembl_la-ensgvsource.o .libs/libensembl_la-ensgvsynonym.o .libs/libensembl_la-ensgvvariation.o .libs/libensembl_la-ensintron.o .libs/libensembl_la-enskaryotype.o .libs/libensembl_la-ensmapper.o .libs/libensembl_la-ensmarker.o .libs/libensembl_la-ensmetacoordinate.o .libs/libensembl_la-ensmetainformation.o .libs/libensembl_la-ensmiscellaneous.o .libs/libensembl_la-ensontology.o .libs/libensembl_la-ensoperon.o .libs/libensembl_la-ensprediction.o .libs/libensembl_la-ensprojectionsegment.o .libs/libensembl_la-ensprotein.o .libs/libensembl_la-ensqc.o .libs/libensembl_la-ensqcalignment.o .libs/libensembl_la-ensqcdasfeature.o .libs/libensembl_la-ensqcdatabase.o .libs/libensembl_la-ensqcsequence.o .libs/libensembl_la-ensqcsubmission.o .libs/libensembl_la-ensqcvariation.o .libs/libensembl_la-ensregistry.o .libs/libensembl_la-ensrepeat.o .libs/libensembl_la-ensseqregion.o .libs/libensembl_la-enssequence.o .libs/libensembl_la-enssequenceedit.o .libs/libensembl_la-enssimple.o .libs/libensembl_la-ensslice.o .libs/libensembl_la-enssoftware.o .libs/libensembl_la-ensstorable.o .libs/libensembl_la-enstable.o .libs/libensembl_la-enstranscript.o .libs/libensembl_la-enstranslation.o .libs/libensembl_la-ensutility.o .libs/libensembl_la-ensvariation.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq -lhpdf -lgd -lpng -lz -lm -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libensembl.so.6 -o .libs/libensembl.so.6.0.5 libtool: link: (cd ".libs" && rm -f "libensembl.so.6" && ln -s "libensembl.so.6.0.5" "libensembl.so.6") libtool: link: (cd ".libs" && rm -f "libensembl.so" && ln -s "libensembl.so.6.0.5" "libensembl.so") libtool: link: ar cru .libs/libensembl.a libensembl_la-ensalign.o libensembl_la-ensanalysis.o libensembl_la-ensassembly.o libensembl_la-ensassemblyexception.o libensembl_la-ensassemblymapper.o libensembl_la-ensattribute.o libensembl_la-ensbaseadaptor.o libensembl_la-enscache.o libensembl_la-enscoordsystem.o libensembl_la-ensdatabaseadaptor.o libensembl_la-ensdatabaseconnection.o libensembl_la-ensdatabaseentry.o libensembl_la-ensdensity.o libensembl_la-ensditag.o libensembl_la-ensexon.o libensembl_la-ensexternaldatabase.o libensembl_la-ensfeature.o libensembl_la-ensgene.o libensembl_la-ensgvallele.o libensembl_la-ensgvattribute.o libensembl_la-ensgvbaseadaptor.o libensembl_la-ensgvdatabaseadaptor.o libensembl_la-ensgvgenotype.o libensembl_la-ensgvindividual.o libensembl_la-ensgvpopulation.o libensembl_la-ensgvsample.o libensembl_la-ensgvsource.o libensembl_la-ensgvsynonym.o libensembl_la-ensgvvariation.o libensembl_la-ensintron.o libensembl_la-enskaryotype.o libensembl_la-ensmapper.o libensembl_la-ensmarker.o libensembl_la-ensmetacoordinate.o libensembl_la-ensmetainformation.o libensembl_la-ensmiscellaneous.o libensembl_la-ensontology.o libensembl_la-ensoperon.o libensembl_la-ensprediction.o libensembl_la-ensprojectionsegment.o libensembl_la-ensprotein.o libensembl_la-ensqc.o libensembl_la-ensqcalignment.o libensembl_la-ensqcdasfeature.o libensembl_la-ensqcdatabase.o libensembl_la-ensqcsequence.o libensembl_la-ensqcsubmission.o libensembl_la-ensqcvariation.o libensembl_la-ensregistry.o libensembl_la-ensrepeat.o libensembl_la-ensseqregion.o libensembl_la-enssequence.o libensembl_la-enssequenceedit.o libensembl_la-enssimple.o libensembl_la-ensslice.o libensembl_la-enssoftware.o libensembl_la-ensstorable.o libensembl_la-enstable.o libensembl_la-enstranscript.o libensembl_la-enstranslation.o libensembl_la-ensutility.o libensembl_la-ensvariation.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libensembl.a libtool: link: ( cd ".libs" && rm -f "libensembl.la" && ln -s "../libensembl.la" "libensembl.la" ) make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/ensembl' Making all in ajaxdb make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/ajaxdb' /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajassemdb.lo `test -f 'ajassemdb.c' || echo './'`ajassemdb.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajdas.lo `test -f 'ajdas.c' || echo './'`ajdas.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajfeatdb.lo `test -f 'ajfeatdb.c' || echo './'`ajfeatdb.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajmart.lo `test -f 'ajmart.c' || echo './'`ajmart.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmart.c -fPIC -DPIC -o .libs/libajaxdb_la-ajmart.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfeatdb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajfeatdb.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdas.c -fPIC -DPIC -o .libs/libajaxdb_la-ajdas.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassemdb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajassemdb.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajassemdb.c -fPIE -o libajaxdb_la-ajassemdb.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajobodb.lo `test -f 'ajobodb.c' || echo './'`ajobodb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajobodb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajobodb.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajobodb.c -fPIE -o libajaxdb_la-ajobodb.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajdas.c -fPIE -o libajaxdb_la-ajdas.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajrefseqdb.lo `test -f 'ajrefseqdb.c' || echo './'`ajrefseqdb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrefseqdb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajrefseqdb.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajresourcedb.lo `test -f 'ajresourcedb.c' || echo './'`ajresourcedb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajrefseqdb.c -fPIE -o libajaxdb_la-ajrefseqdb.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajresourcedb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajresourcedb.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajseqdb.lo `test -f 'ajseqdb.c' || echo './'`ajseqdb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajresourcedb.c -fPIE -o libajaxdb_la-ajresourcedb.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqdb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajseqdb.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajsoap.lo `test -f 'ajsoap.c' || echo './'`ajsoap.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajsoap.c -fPIC -DPIC -o .libs/libajaxdb_la-ajsoap.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajsoap.c -fPIE -o libajaxdb_la-ajsoap.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajtaxdb.lo `test -f 'ajtaxdb.c' || echo './'`ajtaxdb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajfeatdb.c -fPIE -o libajaxdb_la-ajfeatdb.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtaxdb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajtaxdb.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajmart.c -fPIE -o libajaxdb_la-ajmart.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtaxdb.c -fPIE -o libajaxdb_la-ajtaxdb.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajtextdb.lo `test -f 'ajtextdb.c' || echo './'`ajtextdb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtextdb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajtextdb.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajurldb.lo `test -f 'ajurldb.c' || echo './'`ajurldb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajurldb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajurldb.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajvardb.lo `test -f 'ajvardb.c' || echo './'`ajvardb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajurldb.c -fPIE -o libajaxdb_la-ajurldb.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvardb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajvardb.o /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libajaxdb_la-ajxmldb.lo `test -f 'ajxmldb.c' || echo './'`ajxmldb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajvardb.c -fPIE -o libajaxdb_la-ajvardb.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajxmldb.c -fPIC -DPIC -o .libs/libajaxdb_la-ajxmldb.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajxmldb.c -fPIE -o libajaxdb_la-ajxmldb.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajseqdb.c -fPIE -o libajaxdb_la-ajseqdb.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajtextdb.c -fPIE -o libajaxdb_la-ajtextdb.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -version-info 6:5:0 -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o libajaxdb.la -rpath /usr/lib/emboss/lib libajaxdb_la-ajassemdb.lo libajaxdb_la-ajdas.lo libajaxdb_la-ajfeatdb.lo libajaxdb_la-ajmart.lo libajaxdb_la-ajobodb.lo libajaxdb_la-ajrefseqdb.lo libajaxdb_la-ajresourcedb.lo libajaxdb_la-ajseqdb.lo libajaxdb_la-ajsoap.lo libajaxdb_la-ajtaxdb.lo libajaxdb_la-ajtextdb.lo libajaxdb_la-ajurldb.lo libajaxdb_la-ajvardb.lo libajaxdb_la-ajxmldb.lo -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -shared -fPIC -DPIC .libs/libajaxdb_la-ajassemdb.o .libs/libajaxdb_la-ajdas.o .libs/libajaxdb_la-ajfeatdb.o .libs/libajaxdb_la-ajmart.o .libs/libajaxdb_la-ajobodb.o .libs/libajaxdb_la-ajrefseqdb.o .libs/libajaxdb_la-ajresourcedb.o .libs/libajaxdb_la-ajseqdb.o .libs/libajaxdb_la-ajsoap.o .libs/libajaxdb_la-ajtaxdb.o .libs/libajaxdb_la-ajtextdb.o .libs/libajaxdb_la-ajurldb.o .libs/libajaxdb_la-ajvardb.o .libs/libajaxdb_la-ajxmldb.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq -lhpdf -lgd -lpng -lz -lm -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libajaxdb.so.6 -o .libs/libajaxdb.so.6.0.5 libtool: link: (cd ".libs" && rm -f "libajaxdb.so.6" && ln -s "libajaxdb.so.6.0.5" "libajaxdb.so.6") libtool: link: (cd ".libs" && rm -f "libajaxdb.so" && ln -s "libajaxdb.so.6.0.5" "libajaxdb.so") libtool: link: ar cru .libs/libajaxdb.a libajaxdb_la-ajassemdb.o libajaxdb_la-ajdas.o libajaxdb_la-ajfeatdb.o libajaxdb_la-ajmart.o libajaxdb_la-ajobodb.o libajaxdb_la-ajrefseqdb.o libajaxdb_la-ajresourcedb.o libajaxdb_la-ajseqdb.o libajaxdb_la-ajsoap.o libajaxdb_la-ajtaxdb.o libajaxdb_la-ajtextdb.o libajaxdb_la-ajurldb.o libajaxdb_la-ajvardb.o libajaxdb_la-ajxmldb.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libajaxdb.a libtool: link: ( cd ".libs" && rm -f "libajaxdb.la" && ln -s "../libajaxdb.la" "libajaxdb.la" ) make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/ajaxdb' Making all in acd make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/acd' /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ajaxdb -I../../ajax/ensembl -I../../ajax/graphics -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libacd_la-ajacd.lo `test -f 'ajacd.c' || echo './'`ajacd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ajaxdb -I../../ajax/ensembl -I../../ajax/graphics -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajacd.c -fPIC -DPIC -o .libs/libacd_la-ajacd.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ajaxdb -I../../ajax/ensembl -I../../ajax/graphics -I../../ajax/pcre -I../../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ajacd.c -fPIE -o libacd_la-ajacd.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -version-info 6:5:0 -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o libacd.la -rpath /usr/lib/emboss/lib libacd_la-ajacd.lo -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -shared -fPIC -DPIC .libs/libacd_la-ajacd.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq -lhpdf -lgd -lpng -lz -lm -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libacd.so.6 -o .libs/libacd.so.6.0.5 libtool: link: (cd ".libs" && rm -f "libacd.so.6" && ln -s "libacd.so.6.0.5" "libacd.so.6") libtool: link: (cd ".libs" && rm -f "libacd.so" && ln -s "libacd.so.6.0.5" "libacd.so") libtool: link: ar cru .libs/libacd.a libacd_la-ajacd.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libacd.a libtool: link: ( cd ".libs" && rm -f "libacd.la" && ln -s "../libacd.la" "libacd.la" ) make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/acd' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax' Making all in nucleus make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/nucleus' /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embaln.lo `test -f 'embaln.c' || echo './'`embaln.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embcom.lo `test -f 'embcom.c' || echo './'`embcom.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embcons.lo `test -f 'embcons.c' || echo './'`embcons.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embdata.lo `test -f 'embdata.c' || echo './'`embdata.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embdata.c -fPIC -DPIC -o .libs/libnucleus_la-embdata.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embaln.c -fPIC -DPIC -o .libs/libnucleus_la-embaln.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embdata.c -fPIE -o libnucleus_la-embdata.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embcom.c -fPIC -DPIC -o .libs/libnucleus_la-embcom.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embcons.c -fPIC -DPIC -o .libs/libnucleus_la-embcons.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embdbi.lo `test -f 'embdbi.c' || echo './'`embdbi.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embdbi.c -fPIC -DPIC -o .libs/libnucleus_la-embdbi.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embcons.c -fPIE -o libnucleus_la-embcons.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embdmx.lo `test -f 'embdmx.c' || echo './'`embdmx.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embcom.c -fPIE -o libnucleus_la-embcom.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embdmx.c -fPIC -DPIC -o .libs/libnucleus_la-embdmx.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embdbi.c -fPIE -o libnucleus_la-embdbi.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embaln.c -fPIE -o libnucleus_la-embaln.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embdomain.lo `test -f 'embdomain.c' || echo './'`embdomain.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embdomain.c -fPIC -DPIC -o .libs/libnucleus_la-embdomain.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embdomain.c -fPIE -o libnucleus_la-embdomain.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embdmx.c -fPIE -o libnucleus_la-embdmx.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embest.lo `test -f 'embest.c' || echo './'`embest.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embest.c -fPIC -DPIC -o .libs/libnucleus_la-embest.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embexit.lo `test -f 'embexit.c' || echo './'`embexit.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embexit.c -fPIC -DPIC -o .libs/libnucleus_la-embexit.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embexit.c -fPIE -o libnucleus_la-embexit.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embgroup.lo `test -f 'embgroup.c' || echo './'`embgroup.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embiep.lo `test -f 'embiep.c' || echo './'`embiep.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embgroup.c -fPIC -DPIC -o .libs/libnucleus_la-embgroup.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embiep.c -fPIC -DPIC -o .libs/libnucleus_la-embiep.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embest.c -fPIE -o libnucleus_la-embest.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embiep.c -fPIE -o libnucleus_la-embiep.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embindex.lo `test -f 'embindex.c' || echo './'`embindex.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embindex.c -fPIC -DPIC -o .libs/libnucleus_la-embindex.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embinit.lo `test -f 'embinit.c' || echo './'`embinit.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embinit.c -fPIC -DPIC -o .libs/libnucleus_la-embinit.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embinit.c -fPIE -o libnucleus_la-embinit.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embgroup.c -fPIE -o libnucleus_la-embgroup.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embmat.lo `test -f 'embmat.c' || echo './'`embmat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embmat.c -fPIC -DPIC -o .libs/libnucleus_la-embmat.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embmat.c -fPIE -o libnucleus_la-embmat.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embmisc.lo `test -f 'embmisc.c' || echo './'`embmisc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embindex.c -fPIE -o libnucleus_la-embindex.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embmol.lo `test -f 'embmol.c' || echo './'`embmol.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embmisc.c -fPIC -DPIC -o .libs/libnucleus_la-embmisc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embmol.c -fPIC -DPIC -o .libs/libnucleus_la-embmol.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embmisc.c -fPIE -o libnucleus_la-embmisc.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embmol.c -fPIE -o libnucleus_la-embmol.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embnmer.lo `test -f 'embnmer.c' || echo './'`embnmer.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embnmer.c -fPIC -DPIC -o .libs/libnucleus_la-embnmer.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embpat.lo `test -f 'embpat.c' || echo './'`embpat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embpat.c -fPIC -DPIC -o .libs/libnucleus_la-embpat.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embpatlist.lo `test -f 'embpatlist.c' || echo './'`embpatlist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embpatlist.c -fPIC -DPIC -o .libs/libnucleus_la-embpatlist.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embnmer.c -fPIE -o libnucleus_la-embnmer.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embprop.lo `test -f 'embprop.c' || echo './'`embprop.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embpdb.lo `test -f 'embpdb.c' || echo './'`embpdb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embpdb.c -fPIC -DPIC -o .libs/libnucleus_la-embpdb.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embpatlist.c -fPIE -o libnucleus_la-embpatlist.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embprop.c -fPIC -DPIC -o .libs/libnucleus_la-embprop.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embpdb.c -fPIE -o libnucleus_la-embpdb.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embread.lo `test -f 'embread.c' || echo './'`embread.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embread.c -fPIC -DPIC -o .libs/libnucleus_la-embread.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embsig.lo `test -f 'embsig.c' || echo './'`embsig.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embread.c -fPIE -o libnucleus_la-embread.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embsig.c -fPIC -DPIC -o .libs/libnucleus_la-embsig.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embshow.lo `test -f 'embshow.c' || echo './'`embshow.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embprop.c -fPIE -o libnucleus_la-embprop.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embshow.c -fPIC -DPIC -o .libs/libnucleus_la-embshow.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embpat.c -fPIE -o libnucleus_la-embpat.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o libnucleus_la-embword.lo `test -f 'embword.c' || echo './'`embword.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embword.c -fPIC -DPIC -o .libs/libnucleus_la-embword.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embshow.c -fPIE -o libnucleus_la-embshow.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embword.c -fPIE -o libnucleus_la-embword.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../plplot -I../ajax/pcre -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c embsig.c -fPIE -o libnucleus_la-embsig.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -version-info 6:5:0 -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o libnucleus.la -rpath /usr/lib/emboss/lib libnucleus_la-embaln.lo libnucleus_la-embcom.lo libnucleus_la-embcons.lo libnucleus_la-embdata.lo libnucleus_la-embdbi.lo libnucleus_la-embdmx.lo libnucleus_la-embdomain.lo libnucleus_la-embest.lo libnucleus_la-embexit.lo libnucleus_la-embgroup.lo libnucleus_la-embiep.lo libnucleus_la-embindex.lo libnucleus_la-embinit.lo libnucleus_la-embmat.lo libnucleus_la-embmisc.lo libnucleus_la-embmol.lo libnucleus_la-embnmer.lo libnucleus_la-embpat.lo libnucleus_la-embpatlist.lo libnucleus_la-embprop.lo libnucleus_la-embpdb.lo libnucleus_la-embread.lo libnucleus_la-embsig.lo libnucleus_la-embshow.lo libnucleus_la-embword.lo -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -shared -fPIC -DPIC .libs/libnucleus_la-embaln.o .libs/libnucleus_la-embcom.o .libs/libnucleus_la-embcons.o .libs/libnucleus_la-embdata.o .libs/libnucleus_la-embdbi.o .libs/libnucleus_la-embdmx.o .libs/libnucleus_la-embdomain.o .libs/libnucleus_la-embest.o .libs/libnucleus_la-embexit.o .libs/libnucleus_la-embgroup.o .libs/libnucleus_la-embiep.o .libs/libnucleus_la-embindex.o .libs/libnucleus_la-embinit.o .libs/libnucleus_la-embmat.o .libs/libnucleus_la-embmisc.o .libs/libnucleus_la-embmol.o .libs/libnucleus_la-embnmer.o .libs/libnucleus_la-embpat.o .libs/libnucleus_la-embpatlist.o .libs/libnucleus_la-embprop.o .libs/libnucleus_la-embpdb.o .libs/libnucleus_la-embread.o .libs/libnucleus_la-embsig.o .libs/libnucleus_la-embshow.o .libs/libnucleus_la-embword.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq -lhpdf -lgd -lpng -lz -lm -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libnucleus.so.6 -o .libs/libnucleus.so.6.0.5 libtool: link: (cd ".libs" && rm -f "libnucleus.so.6" && ln -s "libnucleus.so.6.0.5" "libnucleus.so.6") libtool: link: (cd ".libs" && rm -f "libnucleus.so" && ln -s "libnucleus.so.6.0.5" "libnucleus.so") libtool: link: ar cru .libs/libnucleus.a libnucleus_la-embaln.o libnucleus_la-embcom.o libnucleus_la-embcons.o libnucleus_la-embdata.o libnucleus_la-embdbi.o libnucleus_la-embdmx.o libnucleus_la-embdomain.o libnucleus_la-embest.o libnucleus_la-embexit.o libnucleus_la-embgroup.o libnucleus_la-embiep.o libnucleus_la-embindex.o libnucleus_la-embinit.o libnucleus_la-embmat.o libnucleus_la-embmisc.o libnucleus_la-embmol.o libnucleus_la-embnmer.o libnucleus_la-embpat.o libnucleus_la-embpatlist.o libnucleus_la-embprop.o libnucleus_la-embpdb.o libnucleus_la-embread.o libnucleus_la-embsig.o libnucleus_la-embshow.o libnucleus_la-embword.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libnucleus.a libtool: link: ( cd ".libs" && rm -f "libnucleus.la" && ln -s "../libnucleus.la" "libnucleus.la" ) make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/nucleus' Making all in emboss make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss' Making all in acd make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/acd' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/acd' Making all in data make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data' Making all in AAINDEX make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/AAINDEX' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/AAINDEX' Making all in CODONS make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/CODONS' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/CODONS' Making all in JASPAR_CNE make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CNE' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CNE' Making all in JASPAR_CORE make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CORE' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CORE' Making all in JASPAR_FAM make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_FAM' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_FAM' Making all in JASPAR_PBM make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM' Making all in JASPAR_PBM_HLH make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HLH' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HLH' Making all in JASPAR_PBM_HOMEO make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HOMEO' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HOMEO' Making all in JASPAR_PHYLOFACTS make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PHYLOFACTS' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PHYLOFACTS' Making all in JASPAR_POLII make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_POLII' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_POLII' Making all in JASPAR_SPLICE make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_SPLICE' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_SPLICE' Making all in OBO make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/OBO' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/OBO' Making all in PRINTS make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/PRINTS' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/PRINTS' Making all in PROSITE make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/PROSITE' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/PROSITE' Making all in REBASE make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/REBASE' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/REBASE' Making all in TAXONOMY make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/TAXONOMY' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/TAXONOMY' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data' Making all in index make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/index' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/index' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss' gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o aaindexextract.o aaindexextract.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o abiview.o abiview.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o acdc.o acdc.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o acdgalaxy.o acdgalaxy.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o acdlog.o acdlog.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o acdpretty.o acdpretty.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o acdtable.o acdtable.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o acdtrace.o acdtrace.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o acdvalid.o acdvalid.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o aligncopy.o aligncopy.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o aligncopypair.o aligncopypair.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o antigenic.o antigenic.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o assemblyget.o assemblyget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o backtranambig.o backtranambig.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o backtranseq.o backtranseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o banana.o banana.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o biosed.o biosed.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o btwisted.o btwisted.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cachedas.o cachedas.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cachedbfetch.o cachedbfetch.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cacheebeyesearch.o cacheebeyesearch.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cacheensembl.o cacheensembl.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cai.o cai.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o chaos.o chaos.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o charge.o charge.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o checktrans.o checktrans.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o chips.o chips.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cirdna.o cirdna.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o codcmp.o codcmp.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o codcopy.o codcopy.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o coderet.o coderet.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o compseq.o compseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cons.o cons.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o consambig.o consambig.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cpgplot.o cpgplot.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cpgreport.o cpgreport.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cusp.o cusp.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cutgextract.o cutgextract.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o cutseq.o cutseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dan.o dan.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbiblast.o dbiblast.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbifasta.o dbifasta.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbiflat.o dbiflat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbigcg.o dbigcg.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbtell.o dbtell.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxcompress.o dbxcompress.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxedam.o dbxedam.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxfasta.o dbxfasta.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxflat.o dbxflat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxgcg.o dbxgcg.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxobo.o dbxobo.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxreport.o dbxreport.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxresource.o dbxresource.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxstat.o dbxstat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxtax.o dbxtax.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dbxuncompress.o dbxuncompress.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o degapseq.o degapseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o density.o density.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o descseq.o descseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o diffseq.o diffseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o distmat.o distmat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dotmatcher.o dotmatcher.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dotpath.o dotpath.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dottup.o dottup.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o dreg.o dreg.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o drfinddata.o drfinddata.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o drfindformat.o drfindformat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o drfindid.o drfindid.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o drfindresource.o drfindresource.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o drget.o drget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o drtext.o drtext.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o edamdef.o edamdef.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o edamhasinput.o edamhasinput.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o edamhasoutput.o edamhasoutput.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o edamisformat.o edamisformat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o edamisid.o edamisid.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o edamname.o edamname.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o edialign.o edialign.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o einverted.o einverted.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o embossdata.o embossdata.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o embossupdate.o embossupdate.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o embossversion.o embossversion.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o emma.o emma.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o emowse.o emowse.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o entret.o entret.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o epestfind.o epestfind.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o eprimer3.o eprimer3.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o eprimer32.o eprimer32.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o equicktandem.o equicktandem.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o est2genome.o est2genome.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o etandem.o etandem.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o extractalign.o extractalign.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o extractfeat.o extractfeat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o extractseq.o extractseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o featcopy.o featcopy.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o featmerge.o featmerge.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o featreport.o featreport.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o feattext.o feattext.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o findkm.o findkm.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o freak.o freak.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o fuzznuc.o fuzznuc.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o fuzzpro.o fuzzpro.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o fuzztran.o fuzztran.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o garnier.o garnier.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o geecee.o geecee.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o getorf.o getorf.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o godef.o godef.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o goname.o goname.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o helixturnhelix.o helixturnhelix.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o hmoment.o hmoment.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o iep.o iep.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o infoalign.o infoalign.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o infoassembly.o infoassembly.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o infobase.o infobase.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o inforesidue.o inforesidue.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o infoseq.o infoseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o isochore.o isochore.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o jaspextract.o jaspextract.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o jaspscan.o jaspscan.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o jembossctl.o jembossctl.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o lindna.o lindna.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o listor.o listor.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o makenucseq.o makenucseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o makeprotseq.o makeprotseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o marscan.o marscan.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o maskambignuc.o maskambignuc.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o maskambigprot.o maskambigprot.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o maskfeat.o maskfeat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o maskseq.o maskseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o matcher.o matcher.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o megamerger.o megamerger.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o merger.o merger.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o msbar.o msbar.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o mwcontam.o mwcontam.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o mwfilter.o mwfilter.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o needle.o needle.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o needleall.o needleall.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o newcpgreport.o newcpgreport.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o newcpgseek.o newcpgseek.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o newseq.o newseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o nohtml.o nohtml.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o noreturn.o noreturn.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o nospace.o nospace.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o notab.o notab.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o notseq.o notseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o nthseq.o nthseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o nthseqset.o nthseqset.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o octanol.o octanol.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o oddcomp.o oddcomp.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontocount.o ontocount.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontoget.o ontoget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontogetcommon.o ontogetcommon.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontogetdown.o ontogetdown.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontogetobsolete.o ontogetobsolete.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontogetroot.o ontogetroot.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontogetsibs.o ontogetsibs.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontogetup.o ontogetup.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontoisobsolete.o ontoisobsolete.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o ontotext.o ontotext.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o palindrome.o palindrome.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pasteseq.o pasteseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o patmatdb.o patmatdb.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o patmatmotifs.o patmatmotifs.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pepcoil.o pepcoil.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pepdigest.o pepdigest.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pepinfo.o pepinfo.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pepnet.o pepnet.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pepstats.o pepstats.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pepwheel.o pepwheel.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pepwindow.o pepwindow.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pepwindowall.o pepwindowall.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plotcon.o plotcon.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o plotorf.o plotorf.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o polydot.o polydot.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o preg.o preg.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o prettyplot.o prettyplot.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o prettyseq.o prettyseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o primersearch.o primersearch.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o printsextract.o printsextract.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o profit.o profit.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o prophecy.o prophecy.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o prophet.o prophet.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o prosextract.o prosextract.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o pscan.o pscan.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o psiphi.o psiphi.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o rebaseextract.o rebaseextract.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o recoder.o recoder.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o redata.o redata.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o refseqget.o refseqget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o remap.o remap.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o restover.o restover.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o restrict.o restrict.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o revseq.o revseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o seealso.o seealso.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o seqcount.o seqcount.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o seqmatchall.o seqmatchall.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o seqret.o seqret.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o seqretsetall.o seqretsetall.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o seqretsplit.o seqretsplit.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o seqxref.o seqxref.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o seqxrefget.o seqxrefget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o servertell.o servertell.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o showalign.o showalign.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o showdb.o showdb.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o showfeat.o showfeat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o showorf.o showorf.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o showpep.o showpep.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o showseq.o showseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o showserver.o showserver.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o shuffleseq.o shuffleseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o sigcleave.o sigcleave.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o silent.o silent.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o sirna.o sirna.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o sixpack.o sixpack.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o sizeseq.o sizeseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o skipredundant.o skipredundant.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o skipseq.o skipseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o splitsource.o splitsource.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o splitter.o splitter.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o stretcher.o stretcher.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o stssearch.o stssearch.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o supermatcher.o supermatcher.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o syco.o syco.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o taxget.o taxget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o taxgetdown.o taxgetdown.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o taxgetrank.o taxgetrank.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o taxgetspecies.o taxgetspecies.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o taxgetup.o taxgetup.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o tcode.o tcode.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o textget.o textget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o textsearch.o textsearch.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o tfextract.o tfextract.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o tfm.o tfm.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o tfscan.o tfscan.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o tmap.o tmap.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o tranalign.o tranalign.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o transeq.o transeq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o trimest.o trimest.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o trimseq.o trimseq.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o trimspace.o trimspace.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o twofeat.o twofeat.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o union.o union.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o urlget.o urlget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o variationget.o variationget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o vectorstrip.o vectorstrip.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o water.o water.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o whichdb.o whichdb.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wobble.o wobble.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wordcount.o wordcount.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wordfinder.o wordfinder.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wordmatch.o wordmatch.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wossdata.o wossdata.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wossinput.o wossinput.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wossname.o wossname.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wossoperation.o wossoperation.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wossoutput.o wossoutput.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wossparam.o wossparam.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o wosstopic.o wosstopic.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o xmlget.o xmlget.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o xmltext.o xmltext.c gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/acd -I../ajax/ajaxdb -I../ajax/ensembl -I../ajax/graphics -I../ajax/pcre -I../nucleus -I../plplot -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -DNO_AUTH -DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o yank.o yank.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o aaindexextract aaindexextract.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o abiview abiview.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o acdc acdc.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o acdgalaxy acdgalaxy.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/aaindexextract aaindexextract.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/abiview abiview.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/acdc acdc.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/acdgalaxy acdgalaxy.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o acdlog acdlog.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o acdpretty acdpretty.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o acdtable acdtable.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o acdtrace acdtrace.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/acdlog acdlog.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/acdpretty acdpretty.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o acdvalid acdvalid.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o aligncopy aligncopy.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/acdtable acdtable.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/acdtrace acdtrace.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/acdvalid acdvalid.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o aligncopypair aligncopypair.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o antigenic antigenic.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/aligncopy aligncopy.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/aligncopypair aligncopypair.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o assemblyget assemblyget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/antigenic antigenic.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o backtranambig backtranambig.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o backtranseq backtranseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o banana banana.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/assemblyget assemblyget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/backtranambig backtranambig.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o biosed biosed.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o btwisted btwisted.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/banana banana.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/backtranseq backtranseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/biosed biosed.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cachedas cachedas.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cachedbfetch cachedbfetch.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cacheebeyesearch cacheebeyesearch.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/btwisted btwisted.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cachedas cachedas.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cachedbfetch cachedbfetch.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cacheensembl cacheensembl.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cai cai.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cacheebeyesearch cacheebeyesearch.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o chaos chaos.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o charge charge.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cacheensembl cacheensembl.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cai cai.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/chaos chaos.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/charge charge.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o checktrans checktrans.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o chips chips.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cirdna cirdna.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o codcmp codcmp.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/checktrans checktrans.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/chips chips.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cirdna cirdna.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/codcmp codcmp.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o codcopy codcopy.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o coderet coderet.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o compseq compseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cons cons.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/codcopy codcopy.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/coderet coderet.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o consambig consambig.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/compseq compseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cons cons.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cpgplot cpgplot.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cpgreport cpgreport.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/consambig consambig.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cusp cusp.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cutgextract cutgextract.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cpgplot cpgplot.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cpgreport cpgreport.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o cutseq cutseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cusp cusp.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dan dan.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cutgextract cutgextract.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbiblast dbiblast.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbifasta dbifasta.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cutseq cutseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbiflat dbiflat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dan dan.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbiblast dbiblast.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbifasta dbifasta.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbigcg dbigcg.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbtell dbtell.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxcompress dbxcompress.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbiflat dbiflat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxedam dbxedam.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbigcg dbigcg.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbtell dbtell.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxcompress dbxcompress.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxfasta dbxfasta.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxedam dbxedam.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxflat dbxflat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxgcg dbxgcg.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxobo dbxobo.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxfasta dbxfasta.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxflat dbxflat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxreport dbxreport.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxgcg dbxgcg.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxobo dbxobo.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxresource dbxresource.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxstat dbxstat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxtax dbxtax.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxreport dbxreport.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxresource dbxresource.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dbxuncompress dbxuncompress.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxtax dbxtax.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o degapseq degapseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxstat dbxstat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o density density.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dbxuncompress dbxuncompress.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/degapseq degapseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o descseq descseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o diffseq diffseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o distmat distmat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/density density.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/descseq descseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/diffseq diffseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dotmatcher dotmatcher.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dotpath dotpath.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/distmat distmat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dotmatcher dotmatcher.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dottup dottup.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o dreg dreg.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o drfinddata drfinddata.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dotpath dotpath.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o drfindformat drfindformat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dottup dottup.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/dreg dreg.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o drfindid drfindid.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/drfinddata drfinddata.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o drfindresource drfindresource.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/drfindformat drfindformat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o drget drget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/drfindid drfindid.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o drtext drtext.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/drfindresource drfindresource.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o edamdef edamdef.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/drget drget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/drtext drtext.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o edamhasinput edamhasinput.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o edamhasoutput edamhasoutput.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/edamdef edamdef.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o edamisformat edamisformat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/edamhasinput edamhasinput.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o edamisid edamisid.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/edamhasoutput edamhasoutput.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o edamname edamname.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o edialign edialign.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/edamisformat edamisformat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/edamisid edamisid.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/edamname edamname.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o einverted einverted.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o embossdata embossdata.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/edialign edialign.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o embossupdate embossupdate.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o embossversion embossversion.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/embossdata embossdata.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/einverted einverted.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/embossupdate embossupdate.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o emma emma.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/embossversion embossversion.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o emowse emowse.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o entret entret.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o epestfind epestfind.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/emma emma.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/emowse emowse.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o eprimer3 eprimer3.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/entret entret.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/epestfind epestfind.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o eprimer32 eprimer32.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o equicktandem equicktandem.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o est2genome est2genome.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/eprimer3 eprimer3.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/eprimer32 eprimer32.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o etandem etandem.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/equicktandem equicktandem.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/est2genome est2genome.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o extractalign extractalign.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o extractfeat extractfeat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o extractseq extractseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/etandem etandem.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/extractalign extractalign.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/extractfeat extractfeat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o featcopy featcopy.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/extractseq extractseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o featmerge featmerge.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o featreport featreport.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/featcopy featcopy.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o feattext feattext.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/featreport featreport.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o findkm findkm.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/featmerge featmerge.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o freak freak.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/findkm findkm.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/feattext feattext.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o fuzznuc fuzznuc.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/freak freak.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o fuzzpro fuzzpro.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o fuzztran fuzztran.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o garnier garnier.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/fuzznuc fuzznuc.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/fuzztran fuzztran.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/garnier garnier.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/fuzzpro fuzzpro.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o geecee geecee.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o getorf getorf.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o godef godef.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o goname goname.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/getorf getorf.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/godef godef.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/geecee geecee.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/goname goname.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o helixturnhelix helixturnhelix.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o hmoment hmoment.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o iep iep.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o infoalign infoalign.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/helixturnhelix helixturnhelix.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/hmoment hmoment.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o infoassembly infoassembly.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/iep iep.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/infoalign infoalign.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o infobase infobase.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o inforesidue inforesidue.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/infoassembly infoassembly.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o infoseq infoseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/infobase infobase.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/inforesidue inforesidue.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o isochore isochore.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o jaspextract jaspextract.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/infoseq infoseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o jaspscan jaspscan.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o jembossctl jembossctl.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/jaspextract jaspextract.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/isochore isochore.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/jaspscan jaspscan.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/jembossctl jembossctl.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o lindna lindna.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o listor listor.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o makenucseq makenucseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o makeprotseq makeprotseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/lindna lindna.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/listor listor.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/makenucseq makenucseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/makeprotseq makeprotseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o marscan marscan.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o maskambignuc maskambignuc.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o maskambigprot maskambigprot.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o maskfeat maskfeat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/marscan marscan.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/maskambignuc maskambignuc.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/maskambigprot maskambigprot.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/maskfeat maskfeat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o maskseq maskseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o matcher matcher.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o megamerger megamerger.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o merger merger.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/maskseq maskseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/matcher matcher.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/merger merger.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/megamerger megamerger.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o msbar msbar.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o mwcontam mwcontam.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o mwfilter mwfilter.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o needle needle.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/msbar msbar.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/mwcontam mwcontam.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/needle needle.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/mwfilter mwfilter.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o needleall needleall.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o newcpgreport newcpgreport.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o newcpgseek newcpgseek.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o newseq newseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/needleall needleall.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/newcpgreport newcpgreport.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/newcpgseek newcpgseek.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o nohtml nohtml.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o noreturn noreturn.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/newseq newseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o nospace nospace.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o notab notab.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/nohtml nohtml.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/noreturn noreturn.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o notseq notseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/nospace nospace.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o nthseq nthseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/notab notab.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o nthseqset nthseqset.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/notseq notseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o octanol octanol.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/nthseq nthseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o oddcomp oddcomp.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/nthseqset nthseqset.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontocount ontocount.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/octanol octanol.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontoget ontoget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/oddcomp oddcomp.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontogetcommon ontogetcommon.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontogetdown ontogetdown.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontocount ontocount.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontoget ontoget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontogetobsolete ontogetobsolete.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontogetcommon ontogetcommon.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontogetroot ontogetroot.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontogetdown ontogetdown.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontogetsibs ontogetsibs.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontogetobsolete ontogetobsolete.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontogetup ontogetup.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontogetroot ontogetroot.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontoisobsolete ontoisobsolete.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontogetsibs ontogetsibs.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontogetup ontogetup.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o ontotext ontotext.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o palindrome palindrome.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pasteseq pasteseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontoisobsolete ontoisobsolete.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o patmatdb patmatdb.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ontotext ontotext.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/palindrome palindrome.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pasteseq pasteseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o patmatmotifs patmatmotifs.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/patmatdb patmatdb.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pepcoil pepcoil.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pepdigest pepdigest.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pepinfo pepinfo.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/patmatmotifs patmatmotifs.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pepnet pepnet.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pepdigest pepdigest.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pepcoil pepcoil.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pepstats pepstats.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pepinfo pepinfo.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pepwheel pepwheel.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pepnet pepnet.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pepwindow pepwindow.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pepstats pepstats.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pepwindowall pepwindowall.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pepwheel pepwheel.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pepwindow pepwindow.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o plotcon plotcon.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o plotorf plotorf.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o polydot polydot.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pepwindowall pepwindowall.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o preg preg.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/plotcon plotcon.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/plotorf plotorf.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o prettyplot prettyplot.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/polydot polydot.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o prettyseq prettyseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o primersearch primersearch.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/preg preg.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o printsextract printsextract.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/prettyplot prettyplot.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/prettyseq prettyseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/primersearch primersearch.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o profit profit.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o prophecy prophecy.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/printsextract printsextract.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o prophet prophet.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o prosextract prosextract.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/profit profit.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/prophecy prophecy.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o pscan pscan.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/prophet prophet.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o psiphi psiphi.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/prosextract prosextract.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o rebaseextract rebaseextract.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/pscan pscan.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o recoder recoder.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/psiphi psiphi.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o redata redata.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/rebaseextract rebaseextract.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/recoder recoder.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o refseqget refseqget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o remap remap.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o restover restover.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/redata redata.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/refseqget refseqget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/remap remap.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o restrict restrict.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/restover restover.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o revseq revseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o seealso seealso.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o seqcount seqcount.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/revseq revseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/restrict restrict.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seealso seealso.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o seqmatchall seqmatchall.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o seqret seqret.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seqcount seqcount.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o seqretsetall seqretsetall.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seqmatchall seqmatchall.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o seqretsplit seqretsplit.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seqret seqret.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o seqxref seqxref.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seqretsetall seqretsetall.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seqretsplit seqretsplit.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o seqxrefget seqxrefget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seqxref seqxref.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o servertell servertell.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o showalign showalign.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o showdb showdb.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/seqxrefget seqxrefget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/showalign showalign.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/servertell servertell.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/showdb showdb.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o showfeat showfeat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o showorf showorf.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o showpep showpep.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o showseq showseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/showfeat showfeat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/showorf showorf.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/showpep showpep.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o showserver showserver.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/showseq showseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o shuffleseq shuffleseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o sigcleave sigcleave.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o silent silent.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/showserver showserver.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/shuffleseq shuffleseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o sirna sirna.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sigcleave sigcleave.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o sixpack sixpack.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/silent silent.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o sizeseq sizeseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o skipredundant skipredundant.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sirna sirna.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sixpack sixpack.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sizeseq sizeseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o skipseq skipseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o splitsource splitsource.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/skipredundant skipredundant.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o splitter splitter.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o stretcher stretcher.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/skipseq skipseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/splitsource splitsource.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o stssearch stssearch.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/splitter splitter.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o supermatcher supermatcher.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/stretcher stretcher.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o syco syco.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/stssearch stssearch.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o taxget taxget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/supermatcher supermatcher.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o taxgetdown taxgetdown.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/syco syco.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o taxgetrank taxgetrank.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/taxget taxget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o taxgetspecies taxgetspecies.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/taxgetdown taxgetdown.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o taxgetup taxgetup.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/taxgetrank taxgetrank.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o tcode tcode.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o textget textget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/taxgetspecies taxgetspecies.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/taxgetup taxgetup.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o textsearch textsearch.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/tcode tcode.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/textget textget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o tfextract tfextract.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o tfm tfm.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o tfscan tfscan.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/textsearch textsearch.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/tfextract tfextract.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/tfm tfm.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o tmap tmap.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o tranalign tranalign.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/tfscan tfscan.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o transeq transeq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o trimest trimest.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/tranalign tranalign.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/tmap tmap.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/transeq transeq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o trimseq trimseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o trimspace trimspace.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/trimest trimest.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o twofeat twofeat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/trimseq trimseq.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o union union.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/trimspace trimspace.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o urlget urlget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/twofeat twofeat.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o variationget variationget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o vectorstrip vectorstrip.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/union union.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/urlget urlget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o water water.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o whichdb whichdb.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/variationget variationget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/vectorstrip vectorstrip.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/water water.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wobble wobble.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wordcount wordcount.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/whichdb whichdb.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wordfinder wordfinder.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wordmatch wordmatch.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wordcount wordcount.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wobble wobble.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wossdata wossdata.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wordfinder wordfinder.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wossinput wossinput.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wordmatch wordmatch.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wossname wossname.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wossdata wossdata.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wossoperation wossoperation.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wossoutput wossoutput.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wossname wossname.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wossinput wossinput.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wossoperation wossoperation.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wossparam wossparam.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o wosstopic wosstopic.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o xmlget xmlget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wossoutput wossoutput.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o xmltext xmltext.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wossparam wossparam.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/wosstopic wosstopic.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/xmlget xmlget.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -lexpat -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lz -lm -lrt -latomic -ldl -lpq -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z,relro -Wl,-z,now -o yank yank.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la -lX11 -lm -lhpdf -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/xmltext xmltext.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>/emboss-6.6.0+dfsg=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -fPIE -pie -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/yank yank.o /usr/lib/i386-linux-gnu/libexpat.so -L/usr/lib/i386-linux-gnu -lmysqlclient -lpthread -lrt -latomic -ldl -lpq ../nucleus/.libs/libnucleus.so ../ajax/acd/.libs/libacd.so ../ajax/ajaxdb/.libs/libajaxdb.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so ../ajax/core/.libs/libajax.so ../ajax/pcre/.libs/libepcre.so ../plplot/.libs/libeplplot.so -lX11 -lhpdf -lgd -lpng -lz -lm -Wl,-rpath -Wl,/usr/lib/emboss/lib make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss' Making all in test make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/test' Making all in data make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/test/data' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/test/data' Making all in embl make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/test/embl' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/test/embl' Making all in genbank make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/test/genbank' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/test/genbank' Making all in pir make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/test/pir' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/test/pir' Making all in swiss make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/test/swiss' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/test/swiss' Making all in swnew make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/test/swnew' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/test/swnew' Making all in testdb make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/test/testdb' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/test/testdb' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/test' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/test' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/test' Making all in doc make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/doc' Making all in manuals make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/manuals' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/manuals' Making all in programs make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs' Making all in html make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs/html' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs/html' Making all in text make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs/text' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs/text' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs' Making all in tutorials make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/tutorials' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/tutorials' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc' Making all in jemboss make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/jemboss' Making all in images make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/jemboss/images' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/jemboss/images' Making all in lib make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/jemboss/lib' Making all in axis make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/jemboss/lib/axis' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/jemboss/lib/axis' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/jemboss/lib' /usr/bin/ant -f ../build.xml package -Demboss.data=../emboss/data -Dname=jemboss -Djar.dir=lib -Dnotformemboss=yes; Buildfile: /<>/emboss-6.6.0+dfsg/jemboss/build.xml init: prepare: [mkdir] Created dir: /<>/emboss-6.6.0+dfsg/jemboss/build prepare-core: [mkdir] Created dir: /<>/emboss-6.6.0+dfsg/jemboss/build/classes prepare-src: compile: [javac] /<>/emboss-6.6.0+dfsg/jemboss/build.xml:69: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 131 source files to /<>/emboss-6.6.0+dfsg/jemboss/build/classes [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.4 [javac] warning: [options] source value 1.4 is obsolete and will be removed in a future release [javac] warning: [options] target value 1.4 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] /<>/emboss-6.6.0+dfsg/jemboss/org/emboss/jemboss/FileManager.java:56: warning: Handler is internal proprietary API and may be removed in a future release [javac] return new com.sun.net.ssl.internal.www.protocol.https.Handler(); [javac] ^ [javac] /<>/emboss-6.6.0+dfsg/jemboss/org/emboss/jemboss/Jemboss.java:127: warning: Handler is internal proprietary API and may be removed in a future release [javac] return new com.sun.net.ssl.internal.www.protocol.https.Handler(); [javac] ^ [javac] /<>/emboss-6.6.0+dfsg/jemboss/org/emboss/jemboss/server/TestPrivateServer.java:75: warning: Handler is internal proprietary API and may be removed in a future release [javac] return new com.sun.net.ssl.internal.www.protocol.https.Handler(); [javac] ^ [javac] /<>/emboss-6.6.0+dfsg/jemboss/org/emboss/jemboss/server/TestPublicServer.java:70: warning: Handler is internal proprietary API and may be removed in a future release [javac] return new com.sun.net.ssl.internal.www.protocol.https.Handler(); [javac] ^ [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] 8 warnings package-matrixfiles: [jar] Building jar: /<>/emboss-6.6.0+dfsg/jemboss/resources/resources.jar copyformemboss: package: [jar] Building jar: /<>/emboss-6.6.0+dfsg/jemboss/lib/jemboss.jar BUILD SUCCESSFUL Total time: 12 seconds make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/jemboss/lib' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/jemboss/lib' Making all in resources make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/jemboss/resources' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/jemboss/resources' Making all in utils make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/jemboss/utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/jemboss/utils' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/jemboss' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/jemboss' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/jemboss' make[3]: Entering directory '/<>/emboss-6.6.0+dfsg' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg' make[2]: Leaving directory '/<>/emboss-6.6.0+dfsg' # Add 2 extra files wanted in jemboss.jar cd jemboss/lib && make jemboss.jar make[2]: Entering directory '/<>/emboss-6.6.0+dfsg/jemboss/lib' make[2]: 'jemboss.jar' is up to date. make[2]: Leaving directory '/<>/emboss-6.6.0+dfsg/jemboss/lib' cd jemboss && jar uf lib/jemboss.jar resources/version resources/*.properties make[1]: Leaving directory '/<>/emboss-6.6.0+dfsg' rm -f debian/*.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/<>/emboss-6.6.0+dfsg' rm -f test-stamp [ -d debian/testbackup ] || cp -a test debian/testbackup sed -i "/SET emboss_tempdata/cSET emboss_tempdata /<>/emboss-6.6.0+dfsg/test" test/.embossrc sed -i "/SET emboss_qadata/cSET emboss_qadata /<>/emboss-6.6.0+dfsg/test" test/.embossrc echo "SET emboss_acdroot /<>/emboss-6.6.0+dfsg/emboss/acd" >> test/.embossrc echo "SET emboss_data /<>/emboss-6.6.0+dfsg/emboss/data" >> test/.embossrc echo "SET emboss_docroot /<>/emboss-6.6.0+dfsg/doc" >> test/.embossrc cd test/qa && LS_COLORS='' EMBOSSRC=/<>/emboss-6.6.0+dfsg/test PATH=/<>/emboss-6.6.0+dfsg/emboss:$PATH EMBOSS_ROOT=../../../ ./qatest.csh Failed to find embassy directory at ../../scripts/qatest.pl line 1045. make[1]: Leaving directory '/<>/emboss-6.6.0+dfsg' fakeroot debian/rules binary-arch dh binary-arch --with autotools-dev,autoreconf dh_testroot -a dh_prep -a rm -f debian/emboss.substvars rm -f debian/emboss.*.debhelper rm -rf debian/emboss/ rm -f debian/emboss-lib.substvars rm -f debian/emboss-lib.*.debhelper rm -rf debian/emboss-lib/ dh_installdirs -a install -d debian/emboss install -d debian/emboss/usr/bin debian/emboss/etc/emboss/embossrc.d debian/emboss/usr/share/man/man1 install -d debian/emboss-lib rm -f debian/*.debhelper.log debian/rules override_dh_auto_install-arch make[1]: Entering directory '/<>/emboss-6.6.0+dfsg' ### Binaries and data go to a temporary dir before being moved to their own package ### /usr/bin/make -C emboss install DESTDIR=/<>/emboss-6.6.0+dfsg/debian/emboss_tmp make[2]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss' Making install in acd make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/acd' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/acd' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' /usr/bin/install -c -m 644 aaindexextract.acd abiview.acd acdc.acd acdpretty.acd acdtable.acd acdtrace.acd acdvalid.acd aligncopy.acd aligncopypair.acd antigenic.acd assemblyget.acd backtranambig.acd backtranseq.acd banana.acd biosed.acd btwisted.acd cachedas.acd cachedbfetch.acd cacheebeyesearch.acd cacheensembl.acd cai.acd chaos.acd charge.acd checktrans.acd chips.acd cirdna.acd codcmp.acd codcopy.acd coderet.acd compseq.acd cons.acd consambig.acd cpgplot.acd cpgreport.acd cusp.acd cutgextract.acd cutseq.acd dan.acd dbiblast.acd dbifasta.acd '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' /usr/bin/install -c -m 644 dbiflat.acd dbigcg.acd dbtell.acd dbxcompress.acd dbxedam.acd dbxfasta.acd dbxflat.acd dbxgcg.acd dbxobo.acd dbxreport.acd dbxresource.acd dbxstat.acd dbxtax.acd dbxuncompress.acd degapseq.acd density.acd descseq.acd diffseq.acd digest.acd distmat.acd dotmatcher.acd dotpath.acd dottup.acd dreg.acd drfinddata.acd drfindformat.acd drfindid.acd drfindresource.acd drget.acd drtext.acd edamdef.acd edamhasinput.acd edamhasoutput.acd edamisformat.acd edamisid.acd edamname.acd edialign.acd einverted.acd embossdata.acd embossupdate.acd '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' /usr/bin/install -c -m 644 embossversion.acd emma.acd emowse.acd entret.acd epestfind.acd eprimer3.acd eprimer32.acd equicktandem.acd est2genome.acd etandem.acd extractalign.acd extractfeat.acd extractseq.acd featcopy.acd featmerge.acd featreport.acd feattext.acd findkm.acd freak.acd fuzznuc.acd fuzzpro.acd fuzztran.acd garnier.acd geecee.acd getorf.acd godef.acd goname.acd helixturnhelix.acd hmoment.acd iep.acd infoalign.acd infoassembly.acd infobase.acd inforesidue.acd infoseq.acd isochore.acd jaspextract.acd jaspscan.acd lindna.acd listor.acd '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' /usr/bin/install -c -m 644 makenucseq.acd makeprotseq.acd marscan.acd maskambignuc.acd maskambigprot.acd maskfeat.acd maskseq.acd matcher.acd megamerger.acd merger.acd msbar.acd mwcontam.acd mwfilter.acd needle.acd needleall.acd newcpgreport.acd newcpgseek.acd newseq.acd nohtml.acd noreturn.acd nospace.acd notab.acd notseq.acd nthseq.acd nthseqset.acd octanol.acd oddcomp.acd ontocount.acd ontoget.acd ontogetcommon.acd ontogetdown.acd ontogetobsolete.acd ontogetroot.acd ontogetsibs.acd ontogetup.acd ontoisobsolete.acd ontotext.acd palindrome.acd pasteseq.acd patmatdb.acd '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' /usr/bin/install -c -m 644 patmatmotifs.acd pepcoil.acd pepdigest.acd pepinfo.acd pepnet.acd pepstats.acd pepwheel.acd pepwindow.acd pepwindowall.acd plotcon.acd plotorf.acd polydot.acd preg.acd prettyplot.acd prettyseq.acd primersearch.acd printsextract.acd profit.acd prophecy.acd prophet.acd prosextract.acd pscan.acd psiphi.acd rebaseextract.acd recoder.acd redata.acd refseqget.acd remap.acd restover.acd restrict.acd revseq.acd seealso.acd seqcount.acd seqmatchall.acd seqret.acd seqretsetall.acd seqretsplit.acd seqxref.acd seqxrefget.acd servertell.acd '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' /usr/bin/install -c -m 644 showalign.acd showdb.acd showfeat.acd showorf.acd showpep.acd showseq.acd showserver.acd shuffleseq.acd sigcleave.acd silent.acd sirna.acd sixpack.acd sizeseq.acd skipredundant.acd skipseq.acd splitsource.acd splitter.acd stretcher.acd stssearch.acd supermatcher.acd syco.acd taxget.acd taxgetdown.acd taxgetrank.acd taxgetspecies.acd taxgetup.acd tcode.acd textget.acd textsearch.acd tfextract.acd tfm.acd tfscan.acd tmap.acd tranalign.acd transeq.acd trimest.acd trimseq.acd trimspace.acd twofeat.acd union.acd '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' /usr/bin/install -c -m 644 urlget.acd variationget.acd vectorstrip.acd water.acd whichdb.acd wobble.acd wordcount.acd wordfinder.acd wordmatch.acd wossdata.acd wossinput.acd wossname.acd wossoperation.acd wossoutput.acd wossparam.acd wosstopic.acd xmlget.acd xmltext.acd yank.acd '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' /usr/bin/install -c -m 644 codes.english groups.standard keywords.standard knowntypes.standard sections.standard variables.standard '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/acd' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/acd' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/acd' Making install in data make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data' Making install in AAINDEX make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/AAINDEX' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/AAINDEX' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/AAINDEX' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/AAINDEX' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/AAINDEX' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/AAINDEX' Making install in CODONS make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/CODONS' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/CODONS' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/CODONS' /usr/bin/install -c -m 644 Cut.index Eacica.cut Eagrtu.cut Eanasp.cut Earath.cut Eazovi.cut Ebacme.cut Ebacst.cut Ebacsu.cut Ebacsu_high.cut Ebommo.cut Ebovin.cut Ebpphx.cut Ebraja.cut Ebrana.cut Ebrare.cut Ecaeel.cut Ecanal.cut Ecanfa.cut Ecaucr.cut Echick.cut Echlre.cut Echltr.cut Ecloab.cut Ecrigr.cut Ecyapa.cut Edayhoff.cut Edicdi.cut Edicdi_high.cut Edrome.cut Edrome_high.cut Eecoli.cut Eecoli_high.cut Eemeni.cut Eemeni_mit.cut Eemeni_high.cut Eerwct.cut Ehaein.cut Ehalma.cut Ehalsa.cut '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/CODONS' /usr/bin/install -c -m 644 Ehorvu.cut Ehuman.cut Eklepn.cut Eklula.cut Elacdl.cut Elyces.cut Emacfa.cut Emaize.cut Emaize_chl.cut Emammal_high.cut Emanse.cut Emarpo_chl.cut Emedsa.cut Emetth.cut Emouse.cut Emyctu.cut Eneigo.cut Eneucr.cut Eoncmy.cut Eorysa.cut Eorysa_chl.cut Epea.cut Epethy.cut Ephavu.cut Epig.cut Eplafa.cut Eprovu.cut Epseae.cut Epsepu.cut Epsesm.cut Erabit.cut Erat.cut Erhile.cut Erhime.cut Erhoca.cut Erhosh.cut Esalsa.cut Esalty.cut Eschma.cut Eschpo.cut '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/CODONS' /usr/bin/install -c -m 644 Eschpo_cai.cut Eschpo_high.cut Eserma.cut Esheep.cut Esoltu.cut Esoybn.cut Espiol.cut Estaau.cut Estrco.cut Estrmu.cut Estrpn.cut Estrpu.cut Esyncy.cut Esynco.cut Etetth.cut Etheth.cut Etobac.cut Etobac_chl.cut Etrybr.cut Etrycr.cut Evibch.cut Ewheat.cut Exenla.cut Eyeast.cut Eyeast_cai.cut Eyeast_high.cut Eyeast_mit.cut Eyeren.cut Eyerpe.cut Eacc.cut Eadenovirus5.cut Eadenovirus7.cut Eaidlav.cut Eanasp.cut Eani.cut Eani_h.cut Eanidmit.cut Easn.cut Eath.cut Eatu.cut '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/CODONS' /usr/bin/install -c -m 644 Eavi.cut Ebja.cut Ebly.cut Ebme.cut Ebmo.cut Ebna.cut Ebov.cut Ebovsp.cut Ebst.cut Ebsu.cut Ebsu_h.cut Ecac.cut Ecal.cut Eccr.cut Ecel.cut Echi.cut Echicken.cut Echisp.cut Echk.cut Echmp.cut Echnt.cut Echos.cut Echzm.cut Echzmrubp.cut Ecpx.cut Ecre.cut Ecrisp.cut Ectr.cut Eddi.cut Eddi_h.cut Edog.cut Edro.cut Edro_h.cut Edrosophila.cut Eeca.cut Eeco.cut Eeco_h.cut Eecoli.cut Ef1.cut Efish.cut '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/CODONS' /usr/bin/install -c -m 644 Efmdvpolyp.cut Eham.cut Ehha.cut Ehin.cut Ehma.cut Ehum.cut Ekla.cut Ekpn.cut Ella.cut Emac.cut Emam_h.cut Emixlg.cut Emsa.cut Emse.cut Emta.cut Emtu.cut Emus.cut Emussp.cut Emva.cut Emze.cut Emzecp.cut Encr.cut Eneu.cut Engo.cut Eoncsp.cut Epae.cut Epet.cut Epfa.cut Ephix174.cut Ephv.cut Ephy.cut Epig.cut Epolyomaa2.cut Epombe.cut Epombecai.cut Epot.cut Eppu.cut Epse.cut Epsy.cut Epvu.cut '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/CODONS' /usr/bin/install -c -m 644 Erab.cut Erabbit.cut Erabsp.cut Eratsp.cut Erca.cut Erhm.cut Eric.cut Erle.cut Erme.cut Ersp.cut Esalsp.cut Esau.cut Esco.cut Esgi.cut Eshp.cut Eshpsp.cut Esli.cut Eslm.cut Esma.cut Esmi.cut Esmu.cut Esoy.cut Espi.cut Espn.cut Espo.cut Espo_h.cut Espu.cut Esta.cut Esty.cut Esus.cut Esv40.cut Esyhsp.cut Esynsp.cut Etbr.cut Etcr.cut Eter.cut Etetsp.cut Etob.cut Etobcp.cut Etom.cut '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/CODONS' /usr/bin/install -c -m 644 Etrb.cut Evco.cut Ewht.cut Exel.cut Exenopus.cut Eyeastcai.cut Eyen.cut Eysc.cut Eysc_h.cut Eyscmt.cut Eysp.cut Ezebrafish.cut Ezma.cut '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/CODONS' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/CODONS' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/CODONS' Making install in JASPAR_CNE make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CNE' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CNE' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_CNE' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_CNE' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CNE' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CNE' Making install in JASPAR_CORE make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CORE' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CORE' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_CORE' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_CORE' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CORE' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_CORE' Making install in JASPAR_FAM make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_FAM' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_FAM' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_FAM' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_FAM' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_FAM' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_FAM' Making install in JASPAR_PBM make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_PBM' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_PBM' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM' Making install in JASPAR_PBM_HLH make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HLH' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HLH' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_PBM_HLH' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_PBM_HLH' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HLH' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HLH' Making install in JASPAR_PBM_HOMEO make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HOMEO' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HOMEO' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_PBM_HOMEO' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_PBM_HOMEO' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HOMEO' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PBM_HOMEO' Making install in JASPAR_PHYLOFACTS make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PHYLOFACTS' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PHYLOFACTS' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_PHYLOFACTS' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_PHYLOFACTS' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PHYLOFACTS' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_PHYLOFACTS' Making install in JASPAR_POLII make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_POLII' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_POLII' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_POLII' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_POLII' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_POLII' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_POLII' Making install in JASPAR_SPLICE make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_SPLICE' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_SPLICE' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_SPLICE' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/JASPAR_SPLICE' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_SPLICE' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/JASPAR_SPLICE' Making install in OBO make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/OBO' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/OBO' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/OBO' /usr/bin/install -c -m 644 chebi.obo eco.obo go.obo pathway.obo ro.obo so.obo software.obo '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/OBO' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/OBO' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/OBO' Making install in PRINTS make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/PRINTS' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/PRINTS' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/PRINTS' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/PRINTS' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/PRINTS' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/PRINTS' Making install in PROSITE make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/PROSITE' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/PROSITE' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/PROSITE' /usr/bin/install -c -m 644 dummyfile '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/PROSITE' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/PROSITE' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/PROSITE' Making install in REBASE make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/REBASE' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/REBASE' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/REBASE' /usr/bin/install -c -m 644 embossre.equ '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/REBASE' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/REBASE' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/REBASE' Making install in TAXONOMY make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/TAXONOMY' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data/TAXONOMY' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/TAXONOMY' /usr/bin/install -c -m 644 division.dmp gencode.dmp merged.dmp names.dmp nodes.dmp '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data/TAXONOMY' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/TAXONOMY' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data/TAXONOMY' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/data' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data' /usr/bin/install -c -m 644 DRCAT.dat EBLOSUM30 EBLOSUM35 EBLOSUM40 EBLOSUM45 EBLOSUM50 EBLOSUM55 EBLOSUM60 EBLOSUM62 EBLOSUM62-12 EBLOSUM65 EBLOSUM70 EBLOSUM75 EBLOSUM80 EBLOSUM85 EBLOSUM90 EBLOSUMN EDAM.obo EDNAFULL EDNAMAT EDNASIMPLE EGC.0 EGC.1 EGC.10 EGC.11 EGC.12 EGC.13 EGC.14 EGC.15 EGC.16 EGC.2 EGC.21 EGC.22 EGC.23 EGC.3 EGC.4 EGC.5 EGC.6 EGC.9 EGC.index '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data' /usr/bin/install -c -m 644 EGC.txt ENUC.4.2 ENUC.4.4 EPAM10 EPAM100 EPAM110 EPAM120 EPAM130 EPAM140 EPAM150 EPAM160 EPAM170 EPAM180 EPAM190 EPAM20 EPAM200 EPAM210 EPAM220 EPAM230 EPAM240 EPAM250 EPAM260 EPAM270 EPAM280 EPAM290 EPAM30 EPAM300 EPAM310 EPAM320 EPAM330 EPAM340 EPAM350 EPAM360 EPAM370 EPAM380 EPAM390 EPAM40 EPAM400 EPAM410 EPAM420 '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data' /usr/bin/install -c -m 644 EPAM430 EPAM440 EPAM450 EPAM460 EPAM470 EPAM480 EPAM490 EPAM50 EPAM500 EPAM60 EPAM70 EPAM80 EPAM90 Eaa_acc_surface.dat Eaa_hydropathy.dat Eaa_properties.dat Eamino.dat Eangles.dat Eangles_tri.dat Eantigenic.dat Ebases.iub Edayhoff.freq Edna.melt Eembl.ior Eenergy.dat Efeatures.embl Efeatures.emboss Efeatures.gff2 Efeatures.gff3 Efeatures.gff2protein Efeatures.gff3protein Efeatures.pir Efeatures.protein Efeatures.refseqp Efeatures.swiss Efreqs.dat Ehet.dat Ehth.dat Ehth87.dat Emass.dat '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data' /usr/bin/install -c -m 644 Emassmod.dat Ememe.dat Emethylsites.dat Emolwt.dat Emwfilter.dat Enakai.dat EnsemblAliases.dat EnsemblIdentifiers.dat Epepcoil.dat Epk.dat Epkexpasy.dat Epprofile Eprior1.plib Eprior30.plib Eresidues.iub Erna.melt Esig.euk Esig.pro Etags.embl Etags.emboss Etags.gff2 Etags.gff2protein Etags.gff3 Etags.gff3protein Etags.pir Etags.protein Etags.refseqp Etags.swiss Etcode.dat Evdw.dat Ewhite-wimley.dat Matrices.nucleotide Matrices.protein Matrices.proteinstructure SSSUB edialignmat tp400_dna tp400_prot tp400_trans '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/data' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/data' Making install in index make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/index' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss/index' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/index' /usr/bin/install -c -m 644 drcat.ent drcat.pxac drcat.pxcat drcat.pxde drcat.pxedat drcat.pxefmt drcat.pxeid drcat.pxetpc drcat.pxid drcat.pxqfmt drcat.pxqin drcat.pxqout drcat.pxqurl drcat.pxrest drcat.pxrf drcat.pxsoap drcat.pxtaxid drcat.pxurl drcat.xac drcat.xcat drcat.xde drcat.xedat drcat.xefmt drcat.xeid drcat.xetpc drcat.xid drcat.xqfmt drcat.xqin drcat.xqout drcat.xqurl drcat.xrest drcat.xrf drcat.xsoap drcat.xtaxid drcat.xurl chebi.ent chebi.pxac chebi.pxde chebi.pxid chebi.pxis '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/index' /usr/bin/install -c -m 644 chebi.pxnm chebi.pxns chebi.xac chebi.xde chebi.xid chebi.xis chebi.xnm chebi.xns eco.ent eco.pxde eco.pxis eco.xde eco.xis eco.pxac eco.pxid eco.pxnm eco.xac eco.xid eco.xnm edam.ent edam.pxac edam.pxde edam.pxhasin edam.pxhasout edam.pxid edam.pxis edam.pxisfmt edam.pxisid edam.pxnm edam.pxns edam.xac edam.xde edam.xhasin edam.xhasout edam.xid edam.xis edam.xisfmt edam.xisid edam.xnm edam.xns '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/index' /usr/bin/install -c -m 644 go.ent go.pxde go.pxis go.pxns go.xde go.xis go.xns go.pxac go.pxid go.pxnm go.xac go.xid go.xnm pw.ent pw.pxde pw.pxis pw.xde pw.xis pw.pxac pw.pxid pw.pxnm pw.xac pw.xid pw.xnm ro.ent ro.pxde ro.pxis ro.xde ro.xis ro.pxac ro.pxid ro.pxnm ro.xac ro.xid ro.xnm so.ent so.pxde so.pxis so.xde so.xis '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/index' /usr/bin/install -c -m 644 so.pxac so.pxid so.pxnm so.xac so.xid so.xnm swo.ent swo.pxde swo.pxis swo.xde swo.xis swo.pxac swo.pxid swo.pxnm swo.pxns swo.xac swo.xid swo.xnm swo.xns taxon.ent taxon.pxac taxon.pxgc taxon.pxid taxon.pxmgc taxon.pxrnk taxon.pxtax taxon.pxup taxon.xac taxon.xgc taxon.xid taxon.xmgc taxon.xrnk taxon.xtax taxon.xup '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS/index' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/index' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss/index' make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/emboss' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss' /bin/bash ../libtool --mode=install /usr/bin/install -c aaindexextract abiview acdc acdgalaxy acdlog acdpretty acdtable acdtrace acdvalid aligncopy aligncopypair antigenic assemblyget backtranambig backtranseq banana biosed btwisted cachedas cachedbfetch cacheebeyesearch cacheensembl cai chaos charge checktrans chips cirdna codcmp codcopy coderet compseq cons consambig cpgplot cpgreport cusp cutgextract cutseq dan dbiblast dbifasta dbiflat dbigcg dbtell dbxcompress dbxedam dbxfasta dbxflat dbxgcg dbxobo dbxreport dbxresource dbxstat dbxtax dbxuncompress degapseq density descseq diffseq distmat dotmatcher dotpath dottup dreg drfinddata drfindformat drfindid drfindresource drget drtext edamdef edamhasinput edamhasoutput edamisformat edamisid edamname edialign einverted embossdata embossupdate embossversion emma emowse entret epestfind eprimer3 eprimer32 equicktandem est2genome etandem extractalign extractfeat extractseq featcopy featmerge featreport feattext findkm freak fuzznuc fuzzpro fuzztran garnier geecee getorf godef goname helixturnhelix hmoment iep infoalign infoassembly infobase inforesidue infoseq isochore jaspextract jaspscan jembossctl lindna listor makenucseq makeprotseq marscan maskambignuc maskambigprot maskfeat maskseq matcher megamerger merger msbar mwcontam mwfilter needle needleall newcpgreport newcpgseek newseq nohtml noreturn nospace notab notseq nthseq nthseqset octanol oddcomp ontocount ontoget ontogetcommon ontogetdown ontogetobsolete ontogetroot ontogetsibs ontogetup ontoisobsolete ontotext palindrome pasteseq patmatdb patmatmotifs pepcoil pepdigest pepinfo pepnet pepstats pepwheel pepwindow pepwindowall plotcon plotorf polydot preg prettyplot prettyseq primersearch printsextract profit prophecy prophet prosextract pscan psiphi rebaseextract recoder redata refseqget remap restover restrict revseq seealso seqcount seqmatchall seqret seqretsetall seqretsplit seqxref seqxrefget servertell showalign showdb showfeat showorf showpep showseq showserver shuffleseq sigcleave silent sirna sixpack sizeseq skipredundant skipseq splitsource splitter stretcher stssearch supermatcher syco taxget taxgetdown taxgetrank taxgetspecies taxgetup tcode textget textsearch tfextract tfm tfscan tmap tranalign transeq trimest trimseq trimspace twofeat union urlget variationget vectorstrip water whichdb wobble wordcount wordfinder wordmatch wossdata wossinput wossname wossoperation wossoutput wossparam wosstopic xmlget xmltext yank '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss' libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/aaindexextract /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/aaindexextract libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/abiview /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/abiview libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/acdc /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/acdc libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/acdgalaxy /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/acdgalaxy libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/acdlog /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/acdlog libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/acdpretty /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/acdpretty libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/acdtable /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/acdtable libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/acdtrace /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/acdtrace libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/acdvalid /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/acdvalid libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/aligncopy /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/aligncopy libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/aligncopypair /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/aligncopypair libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/antigenic /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/antigenic libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/assemblyget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/assemblyget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/backtranambig /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/backtranambig libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/backtranseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/backtranseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/banana /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/banana libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/biosed /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/biosed libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/btwisted /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/btwisted libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cachedas /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cachedas libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cachedbfetch /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cachedbfetch libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cacheebeyesearch /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cacheebeyesearch libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cacheensembl /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cacheensembl libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cai /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cai libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/chaos /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/chaos libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/charge /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/charge libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/checktrans /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/checktrans libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/chips /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/chips libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cirdna /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cirdna libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/codcmp /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/codcmp libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/codcopy /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/codcopy libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/coderet /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/coderet libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/compseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/compseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cons /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cons libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/consambig /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/consambig libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cpgplot /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cpgplot libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cpgreport /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cpgreport libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cusp /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cusp libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cutgextract /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cutgextract libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/cutseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/cutseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dan /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dan libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbiblast /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbiblast libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbifasta /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbifasta libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbiflat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbiflat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbigcg /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbigcg libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbtell /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbtell libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxcompress /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxcompress libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxedam /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxedam libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxfasta /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxfasta libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxflat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxflat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxgcg /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxgcg libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxobo /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxobo libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxreport /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxreport libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxresource /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxresource libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxstat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxstat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxtax /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxtax libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dbxuncompress /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dbxuncompress libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/degapseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/degapseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/density /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/density libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/descseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/descseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/diffseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/diffseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/distmat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/distmat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dotmatcher /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dotmatcher libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dotpath /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dotpath libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dottup /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dottup libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/dreg /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/dreg libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/drfinddata /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/drfinddata libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/drfindformat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/drfindformat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/drfindid /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/drfindid libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/drfindresource /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/drfindresource libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/drget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/drget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/drtext /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/drtext libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/edamdef /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/edamdef libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/edamhasinput /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/edamhasinput libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/edamhasoutput /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/edamhasoutput libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/edamisformat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/edamisformat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/edamisid /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/edamisid libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/edamname /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/edamname libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/edialign /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/edialign libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/einverted /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/einverted libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/embossdata /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/embossdata libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/embossupdate /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/embossupdate libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/embossversion /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/embossversion libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/emma /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/emma libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/emowse /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/emowse libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/entret /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/entret libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/epestfind /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/epestfind libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/eprimer3 /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/eprimer3 libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/eprimer32 /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/eprimer32 libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/equicktandem /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/equicktandem libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/est2genome /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/est2genome libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/etandem /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/etandem libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/extractalign /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/extractalign libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/extractfeat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/extractfeat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/extractseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/extractseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/featcopy /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/featcopy libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/featmerge /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/featmerge libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/featreport /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/featreport libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/feattext /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/feattext libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/findkm /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/findkm libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/freak /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/freak libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/fuzznuc /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/fuzznuc libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/fuzzpro /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/fuzzpro libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/fuzztran /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/fuzztran libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/garnier /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/garnier libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/geecee /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/geecee libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/getorf /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/getorf libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/godef /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/godef libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/goname /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/goname libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/helixturnhelix /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/helixturnhelix libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/hmoment /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/hmoment libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/iep /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/iep libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/infoalign /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/infoalign libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/infoassembly /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/infoassembly libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/infobase /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/infobase libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/inforesidue /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/inforesidue libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/infoseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/infoseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/isochore /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/isochore libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/jaspextract /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/jaspextract libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/jaspscan /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/jaspscan libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/jembossctl /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/jembossctl libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/lindna /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/lindna libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/listor /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/listor libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/makenucseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/makenucseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/makeprotseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/makeprotseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/marscan /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/marscan libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/maskambignuc /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/maskambignuc libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/maskambigprot /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/maskambigprot libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/maskfeat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/maskfeat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/maskseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/maskseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/matcher /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/matcher libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/megamerger /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/megamerger libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/merger /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/merger libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/msbar /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/msbar libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/mwcontam /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/mwcontam libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/mwfilter /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/mwfilter libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/needle /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/needle libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/needleall /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/needleall libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/newcpgreport /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/newcpgreport libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/newcpgseek /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/newcpgseek libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/newseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/newseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/nohtml /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/nohtml libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/noreturn /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/noreturn libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/nospace /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/nospace libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/notab /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/notab libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/notseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/notseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/nthseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/nthseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/nthseqset /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/nthseqset libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/octanol /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/octanol libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/oddcomp /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/oddcomp libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontocount /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontocount libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontoget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontoget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontogetcommon /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontogetcommon libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontogetdown /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontogetdown libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontogetobsolete /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontogetobsolete libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontogetroot /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontogetroot libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontogetsibs /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontogetsibs libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontogetup /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontogetup libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontoisobsolete /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontoisobsolete libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/ontotext /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/ontotext libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/palindrome /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/palindrome libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pasteseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pasteseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/patmatdb /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/patmatdb libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/patmatmotifs /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/patmatmotifs libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pepcoil /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pepcoil libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pepdigest /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pepdigest libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pepinfo /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pepinfo libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pepnet /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pepnet libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pepstats /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pepstats libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pepwheel /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pepwheel libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pepwindow /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pepwindow libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pepwindowall /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pepwindowall libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/plotcon /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/plotcon libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/plotorf /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/plotorf libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/polydot /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/polydot libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/preg /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/preg libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/prettyplot /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/prettyplot libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/prettyseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/prettyseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/primersearch /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/primersearch libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/printsextract /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/printsextract libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/profit /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/profit libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/prophecy /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/prophecy libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/prophet /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/prophet libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/prosextract /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/prosextract libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/pscan /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/pscan libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/psiphi /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/psiphi libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/rebaseextract /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/rebaseextract libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/recoder /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/recoder libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/redata /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/redata libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/refseqget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/refseqget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/remap /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/remap libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/restover /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/restover libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/restrict /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/restrict libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/revseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/revseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/seealso /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/seealso libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/seqcount /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/seqcount libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/seqmatchall /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/seqmatchall libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/seqret /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/seqret libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/seqretsetall /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/seqretsetall libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/seqretsplit /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/seqretsplit libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/seqxref /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/seqxref libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/seqxrefget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/seqxrefget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/servertell /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/servertell libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/showalign /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/showalign libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/showdb /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/showdb libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/showfeat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/showfeat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/showorf /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/showorf libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/showpep /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/showpep libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/showseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/showseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/showserver /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/showserver libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/shuffleseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/shuffleseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/sigcleave /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/sigcleave libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/silent /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/silent libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/sirna /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/sirna libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/sixpack /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/sixpack libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/sizeseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/sizeseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/skipredundant /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/skipredundant libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/skipseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/skipseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/splitsource /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/splitsource libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/splitter /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/splitter libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/stretcher /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/stretcher libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/stssearch /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/stssearch libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/supermatcher /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/supermatcher libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/syco /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/syco libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/taxget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/taxget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/taxgetdown /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/taxgetdown libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/taxgetrank /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/taxgetrank libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/taxgetspecies /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/taxgetspecies libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/taxgetup /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/taxgetup libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/tcode /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/tcode libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/textget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/textget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/textsearch /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/textsearch libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/tfextract /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/tfextract libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/tfm /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/tfm libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/tfscan /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/tfscan libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/tmap /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/tmap libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/tranalign /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/tranalign libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/transeq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/transeq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/trimest /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/trimest libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/trimseq /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/trimseq libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/trimspace /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/trimspace libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/twofeat /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/twofeat libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/union /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/union libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/urlget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/urlget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/variationget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/variationget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/vectorstrip /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/vectorstrip libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/water /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/water libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/whichdb /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/whichdb libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wobble /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wobble libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wordcount /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wordcount libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wordfinder /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wordfinder libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wordmatch /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wordmatch libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wossdata /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wossdata libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wossinput /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wossinput libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wossname /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wossname libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wossoperation /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wossoperation libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wossoutput /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wossoutput libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wossparam /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wossparam libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/wosstopic /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/wosstopic libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/xmlget /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/xmlget libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/xmltext /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/xmltext libtool: warning: '../nucleus/libnucleus.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/acd/libacd.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ajaxdb/libajaxdb.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/ensembl/libensembl.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/graphics/libajaxg.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/core/libajax.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../ajax/pcre/libepcre.la' has not been installed in '/usr/lib/emboss/lib' libtool: warning: '../plplot/libeplplot.la' has not been installed in '/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/yank /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/yank /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS' /usr/bin/install -c -m 644 emboss.default.template emboss.standard server.biomart server.dasregistry server.dbfetch server.dkfz server.ebeye server.entrez server.ensembl server.ensemblgenomes server.mrs server.mrs3 server.mrs4 server.srs server.wsdbfetch '/<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/share/EMBOSS' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss' make[2]: Leaving directory '/<>/emboss-6.6.0+dfsg/emboss' # Make symbolic links from /usr/bin to /usr/lib/emboss cd /<>/emboss-6.6.0+dfsg/debian/emboss/usr/bin/ ; \ for i in /<>/emboss-6.6.0+dfsg/debian/emboss_tmp/usr/lib/emboss/* ; \ do ln -sf ../lib/emboss/`basename $i` . ; \ done ### Renaming conflicting binaries (see also in binary-arch) ### for i in cons pscan ; \ do mv /<>/emboss-6.6.0+dfsg/debian/emboss/usr/bin/$i /<>/emboss-6.6.0+dfsg/debian/emboss/usr/bin/em_$i ; \ done ### EMBOSS libraries go in the emboss-lib package. ### /usr/bin/make -C ajax install DESTDIR=/<>/emboss-6.6.0+dfsg/debian/emboss-lib make[2]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax' Making install in pcre make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/pcre' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/pcre' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libepcre.la '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/libepcre.so.7.0.9 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libepcre.so.7.0.9 libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libepcre.so.7.0.9 libepcre.so.7 || { rm -f libepcre.so.7 && ln -s libepcre.so.7.0.9 libepcre.so.7; }; }) libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libepcre.so.7.0.9 libepcre.so || { rm -f libepcre.so && ln -s libepcre.so.7.0.9 libepcre.so; }; }) libtool: install: /usr/bin/install -c .libs/libepcre.lai /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libepcre.la libtool: install: /usr/bin/install -c .libs/libepcre.a /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libepcre.a libtool: install: chmod 644 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libepcre.a libtool: install: ranlib /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libepcre.a libtool: warning: remember to run 'libtool --finish /usr/lib/emboss/lib' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include/epcre' /usr/bin/install -c -m 644 pcre.h pcre_config.h pcreemboss.h pcre_internal.h pcreposix.h pcre_printint.src ucp.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include/epcre' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/pcre' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/pcre' Making install in core make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/core' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/core' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libajax.la '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/libajax.so.6.0.5 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajax.so.6.0.5 libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libajax.so.6.0.5 libajax.so.6 || { rm -f libajax.so.6 && ln -s libajax.so.6.0.5 libajax.so.6; }; }) libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libajax.so.6.0.5 libajax.so || { rm -f libajax.so && ln -s libajax.so.6.0.5 libajax.so; }; }) libtool: install: /usr/bin/install -c .libs/libajax.lai /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajax.la libtool: install: /usr/bin/install -c .libs/libajax.a /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajax.a libtool: install: chmod 644 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajax.a libtool: install: ranlib /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajax.a libtool: warning: remember to run 'libtool --finish /usr/lib/emboss/lib' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' /usr/bin/install -c -m 644 ajax.h ajarch.h ajdefine.h ajalign.h ajarr.h ajassem.h ajassemdata.h ajassemread.h ajassemwrite.h ajassert.h ajbamindex.h ajbase.h ajcall.h ajcigar.h ajcod.h ajdan.h ajdmx.h ajdom.h ajdomain.h ajexcept.h ajfeat.h ajfeatdata.h ajfeatread.h ajfeatwrite.h ajfile.h ajfiledata.h ajfileio.h ajfmt.h ajftp.h ajhttp.h ajindex.h ajjava.h ajlib.h ajlist.h ajmath.h ajmatrices.h ajmem.h ajmess.h ajnam.h ajnexus.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' /usr/bin/install -c -m 644 ajobo.h ajobodata.h ajoboread.h ajobowrite.h ajpat.h ajpdb.h ajpdbio.h ajphylo.h ajquery.h ajquerydata.h ajrange.h ajreg.h ajreport.h ajrefseq.h ajrefseqdata.h ajrefseqread.h ajrefseqwrite.h ajresource.h ajresourcedata.h ajresourceread.h ajresourcewrite.h ajseq.h ajseqabi.h ajseqbam.h ajseqdata.h ajseqread.h ajseqtype.h ajseqwrite.h ajsort.h ajsql.h ajstr.h ajsys.h ajtable.h ajtagval.h ajtax.h ajtaxdata.h ajtaxread.h ajtaxwrite.h ajtext.h ajtextdata.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' /usr/bin/install -c -m 644 ajtextread.h ajtextwrite.h ajtime.h ajtranslate.h ajtree.h ajurl.h ajurldata.h ajurlread.h ajurlwrite.h ajutil.h ajvar.h ajvarbcf.h ajvardata.h ajvarread.h ajvarwrite.h ajvector.h ajxml.h ajxmldata.h ajxmlread.h ajxmlwrite.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/core' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/core' Making install in graphics make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/graphics' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/graphics' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libajaxg.la '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/libajaxg.so.6.0.5 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so.6.0.5 libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libajaxg.so.6.0.5 libajaxg.so.6 || { rm -f libajaxg.so.6 && ln -s libajaxg.so.6.0.5 libajaxg.so.6; }; }) libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libajaxg.so.6.0.5 libajaxg.so || { rm -f libajaxg.so && ln -s libajaxg.so.6.0.5 libajaxg.so; }; }) libtool: install: /usr/bin/install -c .libs/libajaxg.lai /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxg.la libtool: install: /usr/bin/install -c .libs/libajaxg.a /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxg.a libtool: install: chmod 644 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxg.a libtool: install: ranlib /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxg.a libtool: warning: remember to run 'libtool --finish /usr/lib/emboss/lib' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' /usr/bin/install -c -m 644 ajgraph.h ajgraphstruct.h ajhist.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/graphics' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/graphics' Making install in ensembl make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/ensembl' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/ensembl' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libensembl.la '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/libensembl.so.6.0.5 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libensembl.so.6.0.5 libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libensembl.so.6.0.5 libensembl.so.6 || { rm -f libensembl.so.6 && ln -s libensembl.so.6.0.5 libensembl.so.6; }; }) libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libensembl.so.6.0.5 libensembl.so || { rm -f libensembl.so && ln -s libensembl.so.6.0.5 libensembl.so; }; }) libtool: install: /usr/bin/install -c .libs/libensembl.lai /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libensembl.la libtool: install: /usr/bin/install -c .libs/libensembl.a /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libensembl.a libtool: install: chmod 644 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libensembl.a libtool: install: ranlib /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libensembl.a libtool: warning: remember to run 'libtool --finish /usr/lib/emboss/lib' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' /usr/bin/install -c -m 644 ensalign.h ensanalysis.h ensassemblyexception.h ensassembly.h ensassemblymapper.h ensattribute.h ensbaseadaptor.h enscache.h enscoordsystem.h ensdatabaseadaptor.h ensdatabaseconnection.h ensdatabaseentry.h ensdata.h ensdensity.h ensditag.h ensembl.h ensexon.h ensexternaldatabase.h ensfeature.h ensgene.h ensgvallele.h ensgvattribute.h ensgvbaseadaptor.h ensgvdata.h ensgvdatabaseadaptor.h ensgvgenotype.h ensgvindividual.h ensgvpopulation.h ensgvsample.h ensgvsource.h ensgvsynonym.h ensgvvariation.h ensintron.h enskaryotype.h ensmapper.h ensmarker.h ensmetacoordinate.h ensmetainformation.h ensmiscellaneous.h ensontology.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' /usr/bin/install -c -m 644 ensoperon.h ensprediction.h ensprojectionsegment.h ensprotein.h ensqc.h ensqcalignment.h ensqcdasfeature.h ensqcdatabase.h ensqcsequence.h ensqcsubmission.h ensqcvariation.h ensregistry.h ensrepeat.h ensseqregion.h enssequenceedit.h enssequence.h enssimple.h ensslice.h enssoftware.h ensstorable.h enstable.h enstranscript.h enstranslation.h ensutility.h ensvariation.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/ensembl' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/ensembl' Making install in ajaxdb make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/ajaxdb' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/ajaxdb' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libajaxdb.la '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/libajaxdb.so.6.0.5 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so.6.0.5 libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libajaxdb.so.6.0.5 libajaxdb.so.6 || { rm -f libajaxdb.so.6 && ln -s libajaxdb.so.6.0.5 libajaxdb.so.6; }; }) libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libajaxdb.so.6.0.5 libajaxdb.so || { rm -f libajaxdb.so && ln -s libajaxdb.so.6.0.5 libajaxdb.so; }; }) libtool: install: /usr/bin/install -c .libs/libajaxdb.lai /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.la libtool: install: /usr/bin/install -c .libs/libajaxdb.a /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.a libtool: install: chmod 644 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.a libtool: install: ranlib /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.a libtool: warning: remember to run 'libtool --finish /usr/lib/emboss/lib' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' /usr/bin/install -c -m 644 ajassemdb.h ajdas.h ajfeatdb.h ajmart.h ajobodb.h ajrefseqdb.h ajresourcedb.h ajseqdb.h ajsoap.h ajtaxdb.h ajtextdb.h ajurldb.h ajvardb.h ajxmldb.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/ajaxdb' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/ajaxdb' Making install in acd make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/acd' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax/acd' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libacd.la '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/libacd.so.6.0.5 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libacd.so.6.0.5 libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libacd.so.6.0.5 libacd.so.6 || { rm -f libacd.so.6 && ln -s libacd.so.6.0.5 libacd.so.6; }; }) libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libacd.so.6.0.5 libacd.so || { rm -f libacd.so && ln -s libacd.so.6.0.5 libacd.so; }; }) libtool: install: /usr/bin/install -c .libs/libacd.lai /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libacd.la libtool: install: /usr/bin/install -c .libs/libacd.a /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libacd.a libtool: install: chmod 644 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libacd.a libtool: install: ranlib /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libacd.a libtool: warning: remember to run 'libtool --finish /usr/lib/emboss/lib' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' /usr/bin/install -c -m 644 ajacd.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/acd' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax/acd' make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/ajax' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax' make[2]: Leaving directory '/<>/emboss-6.6.0+dfsg/ajax' /usr/bin/make -C nucleus install DESTDIR=/<>/emboss-6.6.0+dfsg/debian/emboss-lib make[2]: Entering directory '/<>/emboss-6.6.0+dfsg/nucleus' make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/nucleus' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libnucleus.la '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/libnucleus.so.6.0.5 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so.6.0.5 libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libnucleus.so.6.0.5 libnucleus.so.6 || { rm -f libnucleus.so.6 && ln -s libnucleus.so.6.0.5 libnucleus.so.6; }; }) libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libnucleus.so.6.0.5 libnucleus.so || { rm -f libnucleus.so && ln -s libnucleus.so.6.0.5 libnucleus.so; }; }) libtool: install: /usr/bin/install -c .libs/libnucleus.lai /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libnucleus.la libtool: install: /usr/bin/install -c .libs/libnucleus.a /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libnucleus.a libtool: install: chmod 644 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libnucleus.a libtool: install: ranlib /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libnucleus.a libtool: warning: remember to run 'libtool --finish /usr/lib/emboss/lib' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' /usr/bin/install -c -m 644 emboss.h embaln.h embcom.h embcons.h embdata.h embdbi.h embdmx.h embdomain.h embest.h embexit.h embgroup.h embiep.h embindex.h embinit.h embmat.h embmisc.h embmol.h embnmer.h embpat.h embpatlist.h embprop.h embpdb.h embread.h embsig.h embshow.h embword.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/nucleus' make[2]: Leaving directory '/<>/emboss-6.6.0+dfsg/nucleus' /usr/bin/make -C plplot install DESTDIR=/<>/emboss-6.6.0+dfsg/debian/emboss-lib make[2]: Entering directory '/<>/emboss-6.6.0+dfsg/plplot' Making install in lib make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/plplot/lib' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/plplot/lib' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/share/EMBOSS' /usr/bin/install -c -m 644 plstnd5.fnt plxtnd5.fnt '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/share/EMBOSS' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/plplot/lib' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/plplot/lib' make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/plplot' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/plplot' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libeplplot.la '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib' libtool: install: /usr/bin/install -c .libs/libeplplot.so.3.2.7 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so.3.2.7 libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libeplplot.so.3.2.7 libeplplot.so.3 || { rm -f libeplplot.so.3 && ln -s libeplplot.so.3.2.7 libeplplot.so.3; }; }) libtool: install: (cd /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib && { ln -s -f libeplplot.so.3.2.7 libeplplot.so || { rm -f libeplplot.so && ln -s libeplplot.so.3.2.7 libeplplot.so; }; }) libtool: install: /usr/bin/install -c .libs/libeplplot.lai /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libeplplot.la libtool: install: /usr/bin/install -c .libs/libeplplot.a /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libeplplot.a libtool: install: chmod 644 /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libeplplot.a libtool: install: ranlib /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/lib/libeplplot.a libtool: warning: remember to run 'libtool --finish /usr/lib/emboss/lib' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include/eplplot' /usr/bin/install -c -m 644 drivers.h pdf.h plcore.h plevent.h plplotP.h plxwd.h metadefs.h plConfig.h pldebug.h plplot.h plstrm.h plDevs.h disptab.h pldll.h plhershey-unicode.h ps.h plunicode-type1.h plfci-type1.h '/<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib/emboss/include/eplplot' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/plplot' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/plplot' make[2]: Leaving directory '/<>/emboss-6.6.0+dfsg/plplot' find /<>/emboss-6.6.0+dfsg/debian/emboss-lib/usr/lib -name '*.la' -exec rm {} \; ### Documentation goes in emboss-doc. ### /usr/bin/make -C doc install DESTDIR=/<>/emboss-6.6.0+dfsg/debian/emboss-doc make[2]: Entering directory '/<>/emboss-6.6.0+dfsg/doc' Making install in manuals make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/manuals' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/manuals' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/manuals' /usr/bin/install -c -m 644 adminguide.tar.gz domainatrix.doc program.ps.gz EMBOSS-FreeBSD-HOWTO.txt emboss_qg.pdf emboss_qg.ps emboss.sty fdl.txt '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/manuals' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/manuals' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/manuals' Making install in programs make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs' Making install in html make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs/html' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs/html' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 groups.html acd_group.html alignment_group.html alignment_consensus_group.html alignment_differences_group.html alignment_dot_plots_group.html alignment_global_group.html alignment_local_group.html alignment_multiple_group.html assembly_fragment_assembly_group.html data_resources_group.html data_retrieval_group.html data_retrieval_chemistry_data_group.html data_retrieval_feature_data_group.html data_retrieval_ontology_data_group.html data_retrieval_resource_data_group.html data_retrieval_sequence_data_group.html data_retrieval_sequence_data_assembly_data_group.html data_retrieval_text_data_group.html data_retrieval_tool_data_group.html data_retrieval_url_data_group.html display_group.html documentation_group.html edit_group.html enzyme_kinetics_group.html feature_tables_group.html hmm_group.html information_group.html menus_group.html nucleic_2d_structure_group.html nucleic_codon_usage_group.html nucleic_composition_group.html nucleic_cpg_islands_group.html nucleic_functional_sites_group.html nucleic_gene_finding_group.html nucleic_motifs_group.html nucleic_mutation_group.html nucleic_primers_group.html nucleic_profiles_group.html nucleic_properties_group.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 nucleic_repeats_group.html nucleic_restriction_group.html nucleic_rna_folding_group.html nucleic_transcription_group.html nucleic_translation_group.html ontology_group.html ontology_edam_group.html ontology_go_group.html ontology_taxonomy_group.html phylogeny_group.html phylogeny_consensus_group.html phylogeny_continuous_characters_group.html phylogeny_discrete_characters_group.html phylogeny_distance_matrix_group.html phylogeny_gene_frequencies_group.html phylogeny_molecular_sequence_group.html phylogeny_tree_drawing_group.html protein_2d_structure_group.html protein_3d_structure_group.html protein_composition_group.html protein_domains_group.html protein_functional_sites_group.html protein_modifications_group.html protein_motifs_group.html protein_mutation_group.html protein_profiles_group.html protein_properties_group.html test_group.html utils_group.html utils_database_creation_group.html utils_database_indexing_group.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 emboss_icon.jpg abiview.1.abiview.gif banana.1.banana.gif chaos.1.chaos.gif cirdna.1.cirdna.gif cpgplot.1.cpgplot.gif dan.2.dan.gif density.1.density.gif density.2.density.gif density.3.density.gif dotmatcher.1.dotmatcher.gif dotpath.1.dotpath.gif dottup.1.dottup.gif emboss_icon.gif epestfind.1.epestfind.gif findkm.1.findkm.gif isochore.1.isochore.gif lindna.1.lindna.gif octanol.1.octanol.gif pepinfo.1.pepinfo.gif pepnet.1.pepnet.gif pepwheel.1.pepwheel.gif pepwindow.1.pepwindow.gif pepwindowall.1.pepwindowall.gif plotcon.1.plotcon.gif plotorf.1.plotorf.gif plotorf.2.plotorf.gif polydot.1.polydot.gif prettyplot.1.prettyplot.gif prettyplot.2.prettyplot.gif syco.1.syco.gif tcode.2.tcode.gif tmap.1.tmap.gif wobble.1.wobble.gif '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 aaindexextract.html abiview.html acdc.html acdlog.html acdpretty.html acdtable.html acdtrace.html acdvalid.html aligncopy.html aligncopypair.html antigenic.html assemblyget.html backtranambig.html backtranseq.html banana.html biosed.html btwisted.html cachedas.html cachedbfetch.html cacheebeyesearch.html cacheensembl.html cai.html chaos.html charge.html checktrans.html chips.html cirdna.html codcmp.html codcopy.html coderet.html complex.html compseq.html cons.html consambig.html cpgplot.html cpgreport.html cusp.html cutgextract.html cutseq.html dan.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 dbiblast.html dbifasta.html dbiflat.html dbigcg.html dbtell.html dbxcompress.html dbxedam.html dbxfasta.html dbxflat.html dbxgcg.html dbxobo.html dbxreport.html dbxresource.html dbxstat.html dbxtax.html dbxuncompress.html degapseq.html density.html descseq.html diffseq.html distmat.html dotmatcher.html dotpath.html dottup.html dreg.html drfinddata.html drfindformat.html drfindid.html drfindresource.html drget.html drtext.html edamdef.html edamhasinput.html edamhasoutput.html edamisformat.html edamisid.html edamname.html edialign.html einverted.html embossdata.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 embossupdate.html embossversion.html emma.html emowse.html entret.html epestfind.html eprimer3.html eprimer32.html equicktandem.html est2genome.html etandem.html extractalign.html extractfeat.html extractseq.html featcopy.html featmerge.html featreport.html feattext.html findkm.html freak.html fuzznuc.html fuzzpro.html fuzztran.html garnier.html geecee.html getorf.html godef.html goname.html helixturnhelix.html hmoment.html iep.html index.html infoalign.html infoassembly.html infobase.html inforesidue.html infoseq.html isochore.html jaspextract.html jaspscan.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 jembossctl.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 libscan.html lindna.html listor.html makenucseq.html makeprotseq.html marscan.html maskambignuc.html maskambigprot.html maskfeat.html maskseq.html matcher.html megamerger.html merger.html msbar.html mwcontam.html mwfilter.html needle.html needleall.html newcpgreport.html newcpgseek.html newseq.html nohtml.html noreturn.html nospace.html notab.html notseq.html nthseq.html nthseqset.html octanol.html oddcomp.html ontocount.html ontoget.html ontogetcommon.html ontogetdown.html ontogetobsolete.html ontogetroot.html ontogetsibs.html ontogetup.html ontoisobsolete.html ontotext.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 palindrome.html pasteseq.html patmatdb.html patmatmotifs.html pepcoil.html pepdigest.html pepinfo.html pepnet.html pepstats.html pepwheel.html pepwindow.html pepwindowall.html plotcon.html plotorf.html polydot.html preg.html prettyplot.html prettyseq.html primersearch.html printsextract.html profit.html prophecy.html prophet.html prosextract.html pscan.html psiphi.html rebaseextract.html recoder.html redata.html refseqget.html remap.html restover.html restrict.html revseq.html seealso.html seqcount.html seqmatchall.html seqret.html seqretsetall.html seqretsplit.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 seqxref.html seqxrefget.html servertell.html showalign.html showdb.html showfeat.html showorf.html showpep.html showseq.html showserver.html shuffleseq.html sigcleave.html silent.html sirna.html sixpack.html sizeseq.html skipredundant.html skipseq.html splitsource.html splitter.html stretcher.html stssearch.html supermatcher.html syco.html taxget.html taxgetdown.html taxgetrank.html taxgetspecies.html taxgetup.html tcode.html template.html textget.html textsearch.html tfextract.html tfm.html tfscan.html tmap.html tranalign.html transeq.html trimest.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' /usr/bin/install -c -m 644 trimseq.html trimspace.html twofeat.html union.html urlget.html variationget.html vectorstrip.html water.html whichdb.html wobble.html wordcount.html wordfinder.html wordmatch.html wossdata.html wossinput.html wossname.html wossoperation.html wossoutput.html wossparam.html wosstopic.html xmlget.html xmltext.html yank.html '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/html' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs/html' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs/html' Making install in text make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs/text' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs/text' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/text' /usr/bin/install -c -m 644 aaindexextract.txt abiview.txt acdc.txt acdlog.txt acdpretty.txt acdtable.txt acdtrace.txt acdvalid.txt aligncopy.txt aligncopypair.txt antigenic.txt assemblyget.txt backtranambig.txt backtranseq.txt banana.txt biosed.txt btwisted.txt cachedas.txt cachedbfetch.txt cacheebeyesearch.txt cacheensembl.txt cai.txt chaos.txt charge.txt checktrans.txt chips.txt cirdna.txt codcmp.txt codcopy.txt coderet.txt complex.txt compseq.txt cons.txt consambig.txt cpgplot.txt cpgreport.txt cusp.txt cutgextract.txt cutseq.txt dan.txt '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/text' /usr/bin/install -c -m 644 dbiblast.txt dbifasta.txt dbiflat.txt dbigcg.txt dbtell.txt dbxcompress.txt dbxedam.txt dbxfasta.txt dbxflat.txt dbxgcg.txt dbxobo.txt dbxreport.txt dbxresource.txt dbxstat.txt dbxtax.txt dbxuncompress.txt degapseq.txt density.txt descseq.txt diffseq.txt distmat.txt dotmatcher.txt dotpath.txt dottup.txt dreg.txt drfinddata.txt drfindformat.txt drfindid.txt drfindresource.txt drget.txt drtext.txt edamdef.txt edamhasinput.txt edamhasoutput.txt edamisformat.txt edamisid.txt edamname.txt edialign.txt einverted.txt embossdata.txt '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/text' /usr/bin/install -c -m 644 embossupdate.txt embossversion.txt emma.txt emowse.txt entret.txt epestfind.txt eprimer3.txt eprimer32.txt equicktandem.txt est2genome.txt etandem.txt extractalign.txt extractfeat.txt extractseq.txt featcopy.txt featmerge.txt featreport.txt feattext.txt findkm.txt freak.txt fuzznuc.txt fuzzpro.txt fuzztran.txt garnier.txt geecee.txt getorf.txt godef.txt goname.txt helixturnhelix.txt hmoment.txt iep.txt infoalign.txt infoassembly.txt infobase.txt inforesidue.txt infoseq.txt isochore.txt jaspextract.txt jaspscan.txt jembossctl.txt '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/text' /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/text' /usr/bin/install -c -m 644 lindna.txt listor.txt makenucseq.txt makeprotseq.txt marscan.txt maskambignuc.txt maskambigprot.txt maskfeat.txt maskseq.txt matcher.txt megamerger.txt merger.txt msbar.txt mwcontam.txt mwfilter.txt needle.txt needleall.txt newcpgreport.txt newcpgseek.txt newseq.txt nohtml.txt noreturn.txt nospace.txt notab.txt notseq.txt nthseq.txt nthseqset.txt octanol.txt oddcomp.txt ontocount.txt ontoget.txt ontogetcommon.txt ontogetdown.txt ontogetobsolete.txt ontogetroot.txt ontogetsibs.txt ontogetup.txt ontoisobsolete.txt ontotext.txt palindrome.txt '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/text' /usr/bin/install -c -m 644 pasteseq.txt patmatdb.txt patmatmotifs.txt pepcoil.txt pepdigest.txt pepinfo.txt pepnet.txt pepstats.txt pepwheel.txt pepwindow.txt pepwindowall.txt plotcon.txt plotorf.txt polydot.txt preg.txt prettyplot.txt prettyseq.txt primersearch.txt printsextract.txt profit.txt prophecy.txt prophet.txt prosextract.txt pscan.txt psiphi.txt rebaseextract.txt recoder.txt redata.txt refseqget.txt remap.txt restover.txt restrict.txt revseq.txt seealso.txt seqcount.txt seqmatchall.txt seqret.txt seqretsetall.txt seqretsplit.txt seqxref.txt '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/text' /usr/bin/install -c -m 644 seqxrefget.txt servertell.txt showalign.txt showdb.txt showfeat.txt showorf.txt showpep.txt showseq.txt showserver.txt shuffleseq.txt sigcleave.txt silent.txt sirna.txt sixpack.txt sizeseq.txt skipredundant.txt skipseq.txt splitsource.txt splitter.txt stretcher.txt stssearch.txt supermatcher.txt syco.txt taxget.txt taxgetdown.txt taxgetrank.txt taxgetspecies.txt taxgetup.txt tcode.txt textget.txt textsearch.txt tfextract.txt tfm.txt tfscan.txt tmap.txt tranalign.txt transeq.txt trimest.txt trimseq.txt trimspace.txt '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/text' /usr/bin/install -c -m 644 twofeat.txt union.txt urlget.txt variationget.txt vectorstrip.txt water.txt whichdb.txt wobble.txt wordcount.txt wordfinder.txt wordmatch.txt wossdata.txt wossinput.txt wossname.txt wossoperation.txt wossoutput.txt wossparam.txt wosstopic.txt xmlget.txt xmltext.txt yank.txt '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/programs/text' make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs/text' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs/text' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs' make[5]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/programs' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/programs' Making install in tutorials make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/tutorials' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc/tutorials' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/tutorials' /usr/bin/install -c -m 644 emboss-gcg.ppt emboss-interfaces.ppt emboss-talk.ppt emboss_tut.tar.gz '/<>/emboss-6.6.0+dfsg/debian/emboss-doc/usr/share/EMBOSS/doc/tutorials' make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/tutorials' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc/tutorials' make[3]: Entering directory '/<>/emboss-6.6.0+dfsg/doc' make[4]: Entering directory '/<>/emboss-6.6.0+dfsg/doc' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc' make[3]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc' make[2]: Leaving directory '/<>/emboss-6.6.0+dfsg/doc' antiword debian/emboss-doc/usr/share/EMBOSS/doc/manuals/domainatrix.doc > debian/emboss-doc/usr/share/EMBOSS/doc/manuals/domainatrix.txt # Remove this file when the relicenced file becomes part of the upstream tarball. uudecode -o debian/emboss-doc/usr/share/EMBOSS/doc/manuals/EMBOSS_qg.pdf debian/EMBOSS_qg_new.pdf.uu make[1]: Leaving directory '/<>/emboss-6.6.0+dfsg' dh_install -a cp --reflink=auto -a ./debian/emboss_tmp/usr/lib debian/emboss/usr/ dh_installdocs -a install -d debian/emboss/usr/share/doc/emboss cp --reflink=auto -a AUTHORS debian/emboss/usr/share/doc/emboss cp --reflink=auto -a FAQ debian/emboss/usr/share/doc/emboss cp --reflink=auto -a NEWS debian/emboss/usr/share/doc/emboss cp --reflink=auto -a THANKS debian/emboss/usr/share/doc/emboss cp --reflink=auto -a debian/reference debian/emboss/usr/share/doc/emboss chown -R 0:0 debian/emboss/usr/share/doc chmod -R go=rX debian/emboss/usr/share/doc chmod -R u\+rw debian/emboss/usr/share/doc install -p -m0644 debian/README.debian debian/emboss/usr/share/doc/emboss/README.Debian install -p -m0644 debian/copyright debian/emboss/usr/share/doc/emboss/copyright install -d debian/emboss-lib/usr/share/doc/emboss-lib install -p -m0644 debian/copyright debian/emboss-lib/usr/share/doc/emboss-lib/copyright rm -f debian/*.debhelper.log debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>/emboss-6.6.0+dfsg' dh_installchangelogs -k ChangeLog install -p -m0644 debian/changelog debian/emboss/usr/share/doc/emboss/changelog.Debian install -p -m0644 ChangeLog debian/emboss/usr/share/doc/emboss/changelog ln -sf changelog debian/emboss/usr/share/doc/emboss/ChangeLog install -p -m0644 debian/changelog debian/emboss-lib/usr/share/doc/emboss-lib/changelog.Debian install -p -m0644 ChangeLog debian/emboss-lib/usr/share/doc/emboss-lib/changelog ln -sf changelog debian/emboss-lib/usr/share/doc/emboss-lib/ChangeLog make[1]: Leaving directory '/<>/emboss-6.6.0+dfsg' rm -f debian/*.debhelper.log debian/rules override_dh_installman-arch make[1]: Entering directory '/<>/emboss-6.6.0+dfsg' dh_installman -a -p emboss install -p -m0644 debian/manpages/aaindexextract.1e debian/emboss/usr/share/man/man1/aaindexextract.1e install -p -m0644 debian/manpages/abiview.1e debian/emboss/usr/share/man/man1/abiview.1e install -p -m0644 debian/manpages/acdc.1e debian/emboss/usr/share/man/man1/acdc.1e install -p -m0644 debian/manpages/acdlog.1e debian/emboss/usr/share/man/man1/acdlog.1e install -p -m0644 debian/manpages/acdpretty.1e debian/emboss/usr/share/man/man1/acdpretty.1e install -p -m0644 debian/manpages/acdrelations.1e debian/emboss/usr/share/man/man1/acdrelations.1e install -p -m0644 debian/manpages/acdtable.1e debian/emboss/usr/share/man/man1/acdtable.1e install -p -m0644 debian/manpages/acdtrace.1e debian/emboss/usr/share/man/man1/acdtrace.1e install -p -m0644 debian/manpages/acdvalid.1e debian/emboss/usr/share/man/man1/acdvalid.1e install -p -m0644 debian/manpages/ajbad.1e debian/emboss/usr/share/man/man1/ajbad.1e install -p -m0644 debian/manpages/ajfeatest.1e debian/emboss/usr/share/man/man1/ajfeatest.1e install -p -m0644 debian/manpages/ajtest.1e debian/emboss/usr/share/man/man1/ajtest.1e install -p -m0644 debian/manpages/aligncopy.1e debian/emboss/usr/share/man/man1/aligncopy.1e install -p -m0644 debian/manpages/aligncopypair.1e debian/emboss/usr/share/man/man1/aligncopypair.1e install -p -m0644 debian/manpages/antigenic.1e debian/emboss/usr/share/man/man1/antigenic.1e install -p -m0644 debian/manpages/backtranambig.1e debian/emboss/usr/share/man/man1/backtranambig.1e install -p -m0644 debian/manpages/backtranseq.1e debian/emboss/usr/share/man/man1/backtranseq.1e install -p -m0644 debian/manpages/banana.1e debian/emboss/usr/share/man/man1/banana.1e install -p -m0644 debian/manpages/biosed.1e debian/emboss/usr/share/man/man1/biosed.1e install -p -m0644 debian/manpages/btwisted.1e debian/emboss/usr/share/man/man1/btwisted.1e install -p -m0644 debian/manpages/cachedas.1e debian/emboss/usr/share/man/man1/cachedas.1e install -p -m0644 debian/manpages/cachedbfetch.1e debian/emboss/usr/share/man/man1/cachedbfetch.1e install -p -m0644 debian/manpages/cacheebeyesearch.1e debian/emboss/usr/share/man/man1/cacheebeyesearch.1e install -p -m0644 debian/manpages/cacheensembl.1e debian/emboss/usr/share/man/man1/cacheensembl.1e install -p -m0644 debian/manpages/cai.1e debian/emboss/usr/share/man/man1/cai.1e install -p -m0644 debian/manpages/chaos.1e debian/emboss/usr/share/man/man1/chaos.1e install -p -m0644 debian/manpages/charge.1e debian/emboss/usr/share/man/man1/charge.1e install -p -m0644 debian/manpages/checktrans.1e debian/emboss/usr/share/man/man1/checktrans.1e install -p -m0644 debian/manpages/chips.1e debian/emboss/usr/share/man/man1/chips.1e install -p -m0644 debian/manpages/cirdna.1e debian/emboss/usr/share/man/man1/cirdna.1e install -p -m0644 debian/manpages/codcmp.1e debian/emboss/usr/share/man/man1/codcmp.1e install -p -m0644 debian/manpages/codcopy.1e debian/emboss/usr/share/man/man1/codcopy.1e install -p -m0644 debian/manpages/coderet.1e debian/emboss/usr/share/man/man1/coderet.1e install -p -m0644 debian/manpages/complex.1e debian/emboss/usr/share/man/man1/complex.1e install -p -m0644 debian/manpages/compseq.1e debian/emboss/usr/share/man/man1/compseq.1e install -p -m0644 debian/manpages/cons.1e debian/emboss/usr/share/man/man1/cons.1e install -p -m0644 debian/manpages/consambig.1e debian/emboss/usr/share/man/man1/consambig.1e install -p -m0644 debian/manpages/corbatest.1e debian/emboss/usr/share/man/man1/corbatest.1e install -p -m0644 debian/manpages/cpgplot.1e debian/emboss/usr/share/man/man1/cpgplot.1e install -p -m0644 debian/manpages/cpgreport.1e debian/emboss/usr/share/man/man1/cpgreport.1e install -p -m0644 debian/manpages/cusp.1e debian/emboss/usr/share/man/man1/cusp.1e install -p -m0644 debian/manpages/cutgextract.1e debian/emboss/usr/share/man/man1/cutgextract.1e install -p -m0644 debian/manpages/cutseq.1e debian/emboss/usr/share/man/man1/cutseq.1e install -p -m0644 debian/manpages/dan.1e debian/emboss/usr/share/man/man1/dan.1e install -p -m0644 debian/manpages/dastest.1e debian/emboss/usr/share/man/man1/dastest.1e install -p -m0644 debian/manpages/dbfetchtest.1e debian/emboss/usr/share/man/man1/dbfetchtest.1e install -p -m0644 debian/manpages/dbget.1e debian/emboss/usr/share/man/man1/dbget.1e install -p -m0644 debian/manpages/dbgeturl.1e debian/emboss/usr/share/man/man1/dbgeturl.1e install -p -m0644 debian/manpages/dbiblast.1e debian/emboss/usr/share/man/man1/dbiblast.1e install -p -m0644 debian/manpages/dbifasta.1e debian/emboss/usr/share/man/man1/dbifasta.1e install -p -m0644 debian/manpages/dbiflat.1e debian/emboss/usr/share/man/man1/dbiflat.1e install -p -m0644 debian/manpages/dbigcg.1e debian/emboss/usr/share/man/man1/dbigcg.1e install -p -m0644 debian/manpages/dbshowdat.1e debian/emboss/usr/share/man/man1/dbshowdat.1e install -p -m0644 debian/manpages/dbshowquery.1e debian/emboss/usr/share/man/man1/dbshowquery.1e install -p -m0644 debian/manpages/dbtell.1e debian/emboss/usr/share/man/man1/dbtell.1e install -p -m0644 debian/manpages/dbtellquery.1e debian/emboss/usr/share/man/man1/dbtellquery.1e install -p -m0644 debian/manpages/dbxcompress.1e debian/emboss/usr/share/man/man1/dbxcompress.1e install -p -m0644 debian/manpages/dbxedam.1e debian/emboss/usr/share/man/man1/dbxedam.1e install -p -m0644 debian/manpages/dbxfasta.1e debian/emboss/usr/share/man/man1/dbxfasta.1e install -p -m0644 debian/manpages/dbxflat.1e debian/emboss/usr/share/man/man1/dbxflat.1e install -p -m0644 debian/manpages/dbxgcg.1e debian/emboss/usr/share/man/man1/dbxgcg.1e install -p -m0644 debian/manpages/dbxobo.1e debian/emboss/usr/share/man/man1/dbxobo.1e install -p -m0644 debian/manpages/dbxreport.1e debian/emboss/usr/share/man/man1/dbxreport.1e install -p -m0644 debian/manpages/dbxresource.1e debian/emboss/usr/share/man/man1/dbxresource.1e install -p -m0644 debian/manpages/dbxstat.1e debian/emboss/usr/share/man/man1/dbxstat.1e install -p -m0644 debian/manpages/dbxtax.1e debian/emboss/usr/share/man/man1/dbxtax.1e install -p -m0644 debian/manpages/dbxuncompress.1e debian/emboss/usr/share/man/man1/dbxuncompress.1e install -p -m0644 debian/manpages/degapseq.1e debian/emboss/usr/share/man/man1/degapseq.1e install -p -m0644 debian/manpages/density.1e debian/emboss/usr/share/man/man1/density.1e install -p -m0644 debian/manpages/descseq.1e debian/emboss/usr/share/man/man1/descseq.1e install -p -m0644 debian/manpages/diffseq.1e debian/emboss/usr/share/man/man1/diffseq.1e install -p -m0644 debian/manpages/digest.1e debian/emboss/usr/share/man/man1/digest.1e install -p -m0644 debian/manpages/distmat.1e debian/emboss/usr/share/man/man1/distmat.1e install -p -m0644 debian/manpages/docxmlvalid.1e debian/emboss/usr/share/man/man1/docxmlvalid.1e install -p -m0644 debian/manpages/docxmlwell.1e debian/emboss/usr/share/man/man1/docxmlwell.1e install -p -m0644 debian/manpages/domtesta.1e debian/emboss/usr/share/man/man1/domtesta.1e install -p -m0644 debian/manpages/domtestb.1e debian/emboss/usr/share/man/man1/domtestb.1e install -p -m0644 debian/manpages/domtestc.1e debian/emboss/usr/share/man/man1/domtestc.1e install -p -m0644 debian/manpages/domtestd.1e debian/emboss/usr/share/man/man1/domtestd.1e install -p -m0644 debian/manpages/dotmatcher.1e debian/emboss/usr/share/man/man1/dotmatcher.1e install -p -m0644 debian/manpages/dotpath.1e debian/emboss/usr/share/man/man1/dotpath.1e install -p -m0644 debian/manpages/dottup.1e debian/emboss/usr/share/man/man1/dottup.1e install -p -m0644 debian/manpages/dreg.1e debian/emboss/usr/share/man/man1/dreg.1e install -p -m0644 debian/manpages/drfinddata.1e debian/emboss/usr/share/man/man1/drfinddata.1e install -p -m0644 debian/manpages/drfindformat.1e debian/emboss/usr/share/man/man1/drfindformat.1e install -p -m0644 debian/manpages/drfindid.1e debian/emboss/usr/share/man/man1/drfindid.1e install -p -m0644 debian/manpages/drfindresource.1e 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-m0644 debian/manpages/wordcount.1e debian/emboss/usr/share/man/man1/wordcount.1e install -p -m0644 debian/manpages/wordfinder.1e debian/emboss/usr/share/man/man1/wordfinder.1e install -p -m0644 debian/manpages/wordmatch.1e debian/emboss/usr/share/man/man1/wordmatch.1e install -p -m0644 debian/manpages/wossdata.1e debian/emboss/usr/share/man/man1/wossdata.1e install -p -m0644 debian/manpages/wossinput.1e debian/emboss/usr/share/man/man1/wossinput.1e install -p -m0644 debian/manpages/wossname.1e debian/emboss/usr/share/man/man1/wossname.1e install -p -m0644 debian/manpages/wossoperation.1e debian/emboss/usr/share/man/man1/wossoperation.1e install -p -m0644 debian/manpages/wossoutput.1e debian/emboss/usr/share/man/man1/wossoutput.1e install -p -m0644 debian/manpages/wossparam.1e debian/emboss/usr/share/man/man1/wossparam.1e install -p -m0644 debian/manpages/wosstopic.1e debian/emboss/usr/share/man/man1/wosstopic.1e install -p -m0644 debian/manpages/xmltotext.1e debian/emboss/usr/share/man/man1/xmltotext.1e install -p -m0644 debian/manpages/xmltoxml.1e debian/emboss/usr/share/man/man1/xmltoxml.1e install -p -m0644 debian/manpages/xmltransform.1e debian/emboss/usr/share/man/man1/xmltransform.1e install -p -m0644 debian/manpages/yank.1e debian/emboss/usr/share/man/man1/yank.1e man --recode UTF-8 ./notab\.1e > notab\.1e\.new chmod 0755 -- notab.1e.new chown 0:0 -- notab.1e.new mv -f notab.1e.new notab.1e man --recode UTF-8 ./sirna\.1e > sirna\.1e\.new chmod 0755 -- sirna.1e.new chown 0:0 -- sirna.1e.new mv -f sirna.1e.new sirna.1e man --recode UTF-8 ./etandem\.1e > etandem\.1e\.new chmod 0755 -- etandem.1e.new chown 0:0 -- etandem.1e.new mv -f etandem.1e.new etandem.1e man --recode UTF-8 ./seqretsplit\.1e > seqretsplit\.1e\.new chmod 0755 -- seqretsplit.1e.new chown 0:0 -- seqretsplit.1e.new mv -f seqretsplit.1e.new seqretsplit.1e man --recode UTF-8 ./drfindid\.1e > drfindid\.1e\.new chmod 0755 -- drfindid.1e.new chown 0:0 -- drfindid.1e.new mv -f drfindid.1e.new drfindid.1e man --recode UTF-8 ./goname\.1e > goname\.1e\.new chmod 0755 -- goname.1e.new chown 0:0 -- goname.1e.new mv -f goname.1e.new goname.1e man --recode UTF-8 ./textget\.1e > textget\.1e\.new chmod 0755 -- textget.1e.new chown 0:0 -- textget.1e.new mv -f textget.1e.new textget.1e man --recode UTF-8 ./jaspextract\.1e > jaspextract\.1e\.new chmod 0755 -- jaspextract.1e.new chown 0:0 -- jaspextract.1e.new mv -f jaspextract.1e.new jaspextract.1e man --recode UTF-8 ./martdatasets\.1e > martdatasets\.1e\.new chmod 0755 -- martdatasets.1e.new chown 0:0 -- martdatasets.1e.new mv -f martdatasets.1e.new martdatasets.1e man --recode UTF-8 ./aaindexextract\.1e > aaindexextract\.1e\.new chmod 0755 -- aaindexextract.1e.new chown 0:0 -- aaindexextract.1e.new mv -f aaindexextract.1e.new aaindexextract.1e man --recode UTF-8 ./taxgetup\.1e > taxgetup\.1e\.new chmod 0755 -- taxgetup.1e.new chown 0:0 -- taxgetup.1e.new mv -f taxgetup.1e.new taxgetup.1e man --recode UTF-8 ./splitsource\.1e > splitsource\.1e\.new chmod 0755 -- splitsource.1e.new chown 0:0 -- splitsource.1e.new mv -f splitsource.1e.new splitsource.1e man --recode UTF-8 ./octanol\.1e > octanol\.1e\.new chmod 0755 -- octanol.1e.new chown 0:0 -- octanol.1e.new mv -f octanol.1e.new octanol.1e man --recode UTF-8 ./prettyseq\.1e > prettyseq\.1e\.new chmod 0755 -- prettyseq.1e.new chown 0:0 -- prettyseq.1e.new mv -f prettyseq.1e.new prettyseq.1e man --recode UTF-8 ./dreg\.1e > dreg\.1e\.new chmod 0755 -- dreg.1e.new chown 0:0 -- dreg.1e.new mv -f dreg.1e.new dreg.1e man --recode UTF-8 ./dotmatcher\.1e > dotmatcher\.1e\.new chmod 0755 -- dotmatcher.1e.new chown 0:0 -- dotmatcher.1e.new mv -f dotmatcher.1e.new dotmatcher.1e man --recode UTF-8 ./seqinfo\.1e > seqinfo\.1e\.new chmod 0755 -- seqinfo.1e.new chown 0:0 -- seqinfo.1e.new mv -f seqinfo.1e.new seqinfo.1e man --recode UTF-8 ./wordcount\.1e > wordcount\.1e\.new chmod 0755 -- wordcount.1e.new chown 0:0 -- wordcount.1e.new mv -f wordcount.1e.new wordcount.1e man --recode UTF-8 ./sigcleave\.1e > sigcleave\.1e\.new chmod 0755 -- sigcleave.1e.new chown 0:0 -- sigcleave.1e.new mv -f sigcleave.1e.new sigcleave.1e man --recode UTF-8 ./entrytax\.1e > entrytax\.1e\.new chmod 0755 -- entrytax.1e.new chown 0:0 -- entrytax.1e.new mv -f entrytax.1e.new entrytax.1e man --recode UTF-8 ./taxget\.1e > taxget\.1e\.new chmod 0755 -- taxget.1e.new chown 0:0 -- taxget.1e.new mv -f taxget.1e.new taxget.1e man --recode UTF-8 ./ontogetup\.1e > ontogetup\.1e\.new chmod 0755 -- ontogetup.1e.new chown 0:0 -- ontogetup.1e.new mv -f ontogetup.1e.new ontogetup.1e man --recode UTF-8 ./density\.1e > density\.1e\.new chmod 0755 -- density.1e.new chown 0:0 -- density.1e.new mv -f density.1e.new density.1e man --recode UTF-8 ./seealso\.1e > seealso\.1e\.new chmod 0755 -- seealso.1e.new chown 0:0 -- seealso.1e.new mv -f seealso.1e.new seealso.1e man --recode UTF-8 ./martregistry\.1e > martregistry\.1e\.new chmod 0755 -- martregistry.1e.new chown 0:0 -- martregistry.1e.new mv -f martregistry.1e.new martregistry.1e man --recode UTF-8 ./shuffleseq\.1e > shuffleseq\.1e\.new chmod 0755 -- shuffleseq.1e.new chown 0:0 -- shuffleseq.1e.new mv -f shuffleseq.1e.new shuffleseq.1e man --recode UTF-8 ./pepnet\.1e > pepnet\.1e\.new chmod 0755 -- pepnet.1e.new chown 0:0 -- pepnet.1e.new mv -f pepnet.1e.new pepnet.1e man --recode UTF-8 ./banana\.1e > banana\.1e\.new chmod 0755 -- banana.1e.new chown 0:0 -- banana.1e.new mv -f banana.1e.new banana.1e man --recode UTF-8 ./profit\.1e > profit\.1e\.new chmod 0755 -- profit.1e.new chown 0:0 -- profit.1e.new mv -f profit.1e.new profit.1e man --recode UTF-8 ./jaspscan\.1e > jaspscan\.1e\.new chmod 0755 -- jaspscan.1e.new chown 0:0 -- jaspscan.1e.new mv -f jaspscan.1e.new jaspscan.1e man --recode UTF-8 ./martquery\.1e > martquery\.1e\.new chmod 0755 -- martquery.1e.new chown 0:0 -- martquery.1e.new mv -f martquery.1e.new martquery.1e man --recode UTF-8 ./wossname\.1e > wossname\.1e\.new chmod 0755 -- wossname.1e.new chown 0:0 -- wossname.1e.new mv -f wossname.1e.new wossname.1e man --recode UTF-8 ./cachedas\.1e > cachedas\.1e\.new chmod 0755 -- cachedas.1e.new chown 0:0 -- cachedas.1e.new mv -f cachedas.1e.new cachedas.1e man --recode UTF-8 ./newcoils\.1e > newcoils\.1e\.new chmod 0755 -- newcoils.1e.new chown 0:0 -- newcoils.1e.new mv -f newcoils.1e.new newcoils.1e man --recode UTF-8 ./dbifasta\.1e > dbifasta\.1e\.new chmod 0755 -- dbifasta.1e.new chown 0:0 -- dbifasta.1e.new mv -f dbifasta.1e.new dbifasta.1e man --recode UTF-8 ./wossdata\.1e > wossdata\.1e\.new chmod 0755 -- wossdata.1e.new chown 0:0 -- wossdata.1e.new mv -f wossdata.1e.new wossdata.1e man --recode UTF-8 ./acdtable\.1e > acdtable\.1e\.new chmod 0755 -- acdtable.1e.new chown 0:0 -- acdtable.1e.new mv -f acdtable.1e.new acdtable.1e man --recode UTF-8 ./emowse\.1e > emowse\.1e\.new chmod 0755 -- emowse.1e.new chown 0:0 -- emowse.1e.new mv -f emowse.1e.new emowse.1e man --recode UTF-8 ./taxgetrank\.1e > taxgetrank\.1e\.new chmod 0755 -- taxgetrank.1e.new chown 0:0 -- taxgetrank.1e.new mv -f taxgetrank.1e.new taxgetrank.1e man --recode UTF-8 ./edamname\.1e > edamname\.1e\.new chmod 0755 -- edamname.1e.new chown 0:0 -- edamname.1e.new mv -f edamname.1e.new edamname.1e man --recode UTF-8 ./entrails\.1e > entrails\.1e\.new chmod 0755 -- entrails.1e.new chown 0:0 -- entrails.1e.new mv -f entrails.1e.new entrails.1e man --recode UTF-8 ./equicktandem\.1e > equicktandem\.1e\.new chmod 0755 -- equicktandem.1e.new chown 0:0 -- equicktandem.1e.new mv -f equicktandem.1e.new equicktandem.1e man --recode UTF-8 ./edialign\.1e > edialign\.1e\.new chmod 0755 -- edialign.1e.new chown 0:0 -- edialign.1e.new mv -f edialign.1e.new edialign.1e man --recode UTF-8 ./seqgo\.1e > seqgo\.1e\.new chmod 0755 -- seqgo.1e.new chown 0:0 -- seqgo.1e.new mv -f seqgo.1e.new seqgo.1e man --recode UTF-8 ./pepcoil\.1e > pepcoil\.1e\.new chmod 0755 -- pepcoil.1e.new chown 0:0 -- pepcoil.1e.new mv -f pepcoil.1e.new pepcoil.1e man --recode UTF-8 ./drtext\.1e > drtext\.1e\.new chmod 0755 -- drtext.1e.new chown 0:0 -- drtext.1e.new mv -f drtext.1e.new drtext.1e man --recode UTF-8 ./primers\.1e > primers\.1e\.new chmod 0755 -- primers.1e.new chown 0:0 -- primers.1e.new mv -f primers.1e.new primers.1e man --recode UTF-8 ./goseq\.1e > goseq\.1e\.new chmod 0755 -- goseq.1e.new chown 0:0 -- goseq.1e.new mv -f goseq.1e.new goseq.1e man --recode UTF-8 ./docxmlvalid\.1e > docxmlvalid\.1e\.new chmod 0755 -- docxmlvalid.1e.new chown 0:0 -- docxmlvalid.1e.new mv -f docxmlvalid.1e.new docxmlvalid.1e man --recode UTF-8 ./emma\.1e > emma\.1e\.new chmod 0755 -- emma.1e.new chown 0:0 -- emma.1e.new mv -f emma.1e.new emma.1e man --recode UTF-8 ./acdpretty\.1e > acdpretty\.1e\.new chmod 0755 -- acdpretty.1e.new chown 0:0 -- acdpretty.1e.new mv -f acdpretty.1e.new acdpretty.1e man --recode UTF-8 ./ontotext\.1e > ontotext\.1e\.new chmod 0755 -- ontotext.1e.new chown 0:0 -- ontotext.1e.new mv -f ontotext.1e.new ontotext.1e man --recode UTF-8 ./tfextract\.1e > tfextract\.1e\.new chmod 0755 -- tfextract.1e.new chown 0:0 -- tfextract.1e.new mv -f tfextract.1e.new tfextract.1e man --recode UTF-8 ./cutgextract\.1e > cutgextract\.1e\.new chmod 0755 -- cutgextract.1e.new chown 0:0 -- cutgextract.1e.new mv -f cutgextract.1e.new cutgextract.1e man --recode UTF-8 ./trimseq\.1e > trimseq\.1e\.new chmod 0755 -- trimseq.1e.new chown 0:0 -- trimseq.1e.new mv -f trimseq.1e.new trimseq.1e man --recode UTF-8 ./noreturn\.1e > noreturn\.1e\.new chmod 0755 -- noreturn.1e.new chown 0:0 -- noreturn.1e.new mv -f noreturn.1e.new noreturn.1e man --recode UTF-8 ./seqmatchall\.1e > seqmatchall\.1e\.new chmod 0755 -- seqmatchall.1e.new chown 0:0 -- seqmatchall.1e.new mv -f seqmatchall.1e.new seqmatchall.1e man --recode UTF-8 ./feattext\.1e > feattext\.1e\.new chmod 0755 -- feattext.1e.new chown 0:0 -- feattext.1e.new mv -f feattext.1e.new feattext.1e man --recode UTF-8 ./pepwheel\.1e > pepwheel\.1e\.new chmod 0755 -- pepwheel.1e.new chown 0:0 -- pepwheel.1e.new mv -f pepwheel.1e.new pepwheel.1e man --recode UTF-8 ./prophet\.1e > prophet\.1e\.new chmod 0755 -- prophet.1e.new chown 0:0 -- prophet.1e.new mv -f prophet.1e.new prophet.1e man --recode UTF-8 ./servertell\.1e > servertell\.1e\.new chmod 0755 -- servertell.1e.new chown 0:0 -- servertell.1e.new mv -f servertell.1e.new servertell.1e man --recode UTF-8 ./textsearch\.1e > textsearch\.1e\.new chmod 0755 -- textsearch.1e.new chown 0:0 -- textsearch.1e.new mv -f textsearch.1e.new textsearch.1e man --recode UTF-8 ./revseq\.1e > revseq\.1e\.new chmod 0755 -- revseq.1e.new chown 0:0 -- revseq.1e.new mv -f revseq.1e.new revseq.1e man --recode UTF-8 ./treetypedisplay\.1e > treetypedisplay\.1e\.new chmod 0755 -- treetypedisplay.1e.new chown 0:0 -- treetypedisplay.1e.new mv -f treetypedisplay.1e.new treetypedisplay.1e man --recode UTF-8 ./pepwindow\.1e > pepwindow\.1e\.new chmod 0755 -- pepwindow.1e.new chown 0:0 -- pepwindow.1e.new mv -f pepwindow.1e.new pepwindow.1e man --recode UTF-8 ./dbgeturl\.1e > dbgeturl\.1e\.new chmod 0755 -- dbgeturl.1e.new chown 0:0 -- dbgeturl.1e.new mv -f dbgeturl.1e.new dbgeturl.1e man --recode UTF-8 ./pscan\.1e > pscan\.1e\.new chmod 0755 -- pscan.1e.new chown 0:0 -- pscan.1e.new mv -f pscan.1e.new pscan.1e man --recode UTF-8 ./listor\.1e > listor\.1e\.new chmod 0755 -- listor.1e.new chown 0:0 -- listor.1e.new mv -f listor.1e.new listor.1e man --recode UTF-8 ./nospace\.1e > nospace\.1e\.new chmod 0755 -- nospace.1e.new chown 0:0 -- nospace.1e.new mv -f nospace.1e.new nospace.1e man --recode UTF-8 ./printsextract\.1e > printsextract\.1e\.new chmod 0755 -- printsextract.1e.new chown 0:0 -- printsextract.1e.new mv -f printsextract.1e.new printsextract.1e man --recode UTF-8 ./psiphi\.1e > psiphi\.1e\.new chmod 0755 -- psiphi.1e.new chown 0:0 -- psiphi.1e.new mv -f psiphi.1e.new psiphi.1e man --recode UTF-8 ./domtestd\.1e > domtestd\.1e\.new chmod 0755 -- domtestd.1e.new chown 0:0 -- domtestd.1e.new mv -f domtestd.1e.new domtestd.1e man --recode UTF-8 ./merger\.1e > merger\.1e\.new chmod 0755 -- merger.1e.new chown 0:0 -- merger.1e.new mv -f merger.1e.new merger.1e man --recode UTF-8 ./complex\.1e > complex\.1e\.new chmod 0755 -- complex.1e.new chown 0:0 -- complex.1e.new mv -f complex.1e.new complex.1e man --recode UTF-8 ./descseq\.1e > descseq\.1e\.new chmod 0755 -- descseq.1e.new chown 0:0 -- descseq.1e.new mv -f descseq.1e.new descseq.1e man --recode UTF-8 ./entrailshtml\.1e > entrailshtml\.1e\.new chmod 0755 -- entrailshtml.1e.new chown 0:0 -- entrailshtml.1e.new mv -f entrailshtml.1e.new entrailshtml.1e man --recode UTF-8 ./edamdef\.1e > edamdef\.1e\.new chmod 0755 -- edamdef.1e.new chown 0:0 -- edamdef.1e.new mv -f edamdef.1e.new edamdef.1e man --recode UTF-8 ./makeprotseq\.1e > makeprotseq\.1e\.new chmod 0755 -- makeprotseq.1e.new chown 0:0 -- makeprotseq.1e.new mv -f makeprotseq.1e.new makeprotseq.1e man --recode UTF-8 ./edamclean\.1e > edamclean\.1e\.new chmod 0755 -- edamclean.1e.new chown 0:0 -- edamclean.1e.new mv -f edamclean.1e.new edamclean.1e man --recode UTF-8 ./dbfetchtest\.1e > dbfetchtest\.1e\.new chmod 0755 -- dbfetchtest.1e.new chown 0:0 -- dbfetchtest.1e.new mv -f dbfetchtest.1e.new dbfetchtest.1e man --recode UTF-8 ./preg\.1e > preg\.1e\.new chmod 0755 -- preg.1e.new chown 0:0 -- preg.1e.new mv -f preg.1e.new preg.1e man --recode UTF-8 ./ajtest\.1e > ajtest\.1e\.new chmod 0755 -- ajtest.1e.new chown 0:0 -- ajtest.1e.new mv -f ajtest.1e.new ajtest.1e man --recode UTF-8 ./marscan\.1e > marscan\.1e\.new chmod 0755 -- marscan.1e.new chown 0:0 -- marscan.1e.new mv -f marscan.1e.new marscan.1e man --recode UTF-8 ./seqrettype\.1e > seqrettype\.1e\.new chmod 0755 -- seqrettype.1e.new chown 0:0 -- seqrettype.1e.new mv -f seqrettype.1e.new seqrettype.1e man --recode UTF-8 ./corbatest\.1e > corbatest\.1e\.new chmod 0755 -- corbatest.1e.new chown 0:0 -- corbatest.1e.new mv -f corbatest.1e.new corbatest.1e man --recode UTF-8 ./transeq\.1e > transeq\.1e\.new chmod 0755 -- transeq.1e.new chown 0:0 -- transeq.1e.new mv -f transeq.1e.new transeq.1e man --recode UTF-8 ./patmatdb\.1e > patmatdb\.1e\.new chmod 0755 -- patmatdb.1e.new chown 0:0 -- patmatdb.1e.new mv -f patmatdb.1e.new patmatdb.1e man --recode UTF-8 ./garnier\.1e > garnier\.1e\.new chmod 0755 -- garnier.1e.new chown 0:0 -- garnier.1e.new mv -f garnier.1e.new garnier.1e man --recode UTF-8 ./chaos\.1e > chaos\.1e\.new chmod 0755 -- chaos.1e.new chown 0:0 -- chaos.1e.new mv -f chaos.1e.new chaos.1e man --recode UTF-8 ./seqxrefall\.1e > seqxrefall\.1e\.new chmod 0755 -- seqxrefall.1e.new chown 0:0 -- seqxrefall.1e.new mv -f seqxrefall.1e.new seqxrefall.1e man --recode UTF-8 ./isdbdata\.1e > isdbdata\.1e\.new chmod 0755 -- isdbdata.1e.new chown 0:0 -- isdbdata.1e.new mv -f isdbdata.1e.new isdbdata.1e man --recode UTF-8 ./codcmp\.1e > codcmp\.1e\.new chmod 0755 -- codcmp.1e.new chown 0:0 -- codcmp.1e.new mv -f codcmp.1e.new codcmp.1e man --recode UTF-8 ./oddcomp\.1e > oddcomp\.1e\.new chmod 0755 -- oddcomp.1e.new chown 0:0 -- oddcomp.1e.new mv -f oddcomp.1e.new oddcomp.1e man --recode UTF-8 ./dbxuncompress\.1e > dbxuncompress\.1e\.new chmod 0755 -- dbxuncompress.1e.new chown 0:0 -- dbxuncompress.1e.new mv -f dbxuncompress.1e.new dbxuncompress.1e man --recode UTF-8 ./ontocount\.1e > ontocount\.1e\.new chmod 0755 -- ontocount.1e.new chown 0:0 -- ontocount.1e.new mv -f ontocount.1e.new ontocount.1e man --recode UTF-8 ./xmltransform\.1e > xmltransform\.1e\.new chmod 0755 -- xmltransform.1e.new chown 0:0 -- xmltransform.1e.new mv -f xmltransform.1e.new xmltransform.1e man --recode UTF-8 ./ontogetobsolete\.1e > ontogetobsolete\.1e\.new chmod 0755 -- ontogetobsolete.1e.new chown 0:0 -- ontogetobsolete.1e.new mv -f ontogetobsolete.1e.new ontogetobsolete.1e man --recode UTF-8 ./wordmatch\.1e > wordmatch\.1e\.new chmod 0755 -- wordmatch.1e.new chown 0:0 -- wordmatch.1e.new mv -f wordmatch.1e.new wordmatch.1e man --recode UTF-8 ./cons\.1e > cons\.1e\.new chmod 0755 -- cons.1e.new chown 0:0 -- cons.1e.new mv -f cons.1e.new cons.1e man --recode UTF-8 ./drfindformat\.1e > drfindformat\.1e\.new chmod 0755 -- drfindformat.1e.new chown 0:0 -- drfindformat.1e.new mv -f drfindformat.1e.new drfindformat.1e man --recode UTF-8 ./ontogetsibs\.1e > ontogetsibs\.1e\.new chmod 0755 -- ontogetsibs.1e.new chown 0:0 -- ontogetsibs.1e.new mv -f ontogetsibs.1e.new ontogetsibs.1e man --recode UTF-8 ./pepstats\.1e > pepstats\.1e\.new chmod 0755 -- pepstats.1e.new chown 0:0 -- pepstats.1e.new mv -f pepstats.1e.new pepstats.1e man --recode UTF-8 ./acdtrace\.1e > acdtrace\.1e\.new chmod 0755 -- acdtrace.1e.new chown 0:0 -- acdtrace.1e.new mv -f acdtrace.1e.new acdtrace.1e man --recode UTF-8 ./ajfeatest\.1e > ajfeatest\.1e\.new chmod 0755 -- ajfeatest.1e.new chown 0:0 -- ajfeatest.1e.new mv -f ajfeatest.1e.new ajfeatest.1e man --recode UTF-8 ./maskambignuc\.1e > maskambignuc\.1e\.new chmod 0755 -- maskambignuc.1e.new chown 0:0 -- maskambignuc.1e.new mv -f maskambignuc.1e.new maskambignuc.1e man --recode UTF-8 ./cai\.1e > cai\.1e\.new chmod 0755 -- cai.1e.new chown 0:0 -- cai.1e.new mv -f cai.1e.new cai.1e man --recode UTF-8 ./splitter\.1e > splitter\.1e\.new chmod 0755 -- splitter.1e.new chown 0:0 -- splitter.1e.new mv -f splitter.1e.new splitter.1e man --recode UTF-8 ./consambig\.1e > consambig\.1e\.new chmod 0755 -- consambig.1e.new chown 0:0 -- consambig.1e.new mv -f consambig.1e.new consambig.1e man --recode UTF-8 ./stssearch\.1e > stssearch\.1e\.new chmod 0755 -- stssearch.1e.new chown 0:0 -- stssearch.1e.new mv -f stssearch.1e.new stssearch.1e man --recode UTF-8 ./edamhasinput\.1e > edamhasinput\.1e\.new chmod 0755 -- edamhasinput.1e.new chown 0:0 -- edamhasinput.1e.new mv -f edamhasinput.1e.new edamhasinput.1e man --recode UTF-8 ./seqxref\.1e > seqxref\.1e\.new chmod 0755 -- seqxref.1e.new chown 0:0 -- seqxref.1e.new mv -f seqxref.1e.new seqxref.1e man --recode UTF-8 ./dbigcg\.1e > dbigcg\.1e\.new chmod 0755 -- dbigcg.1e.new chown 0:0 -- dbigcg.1e.new mv -f dbigcg.1e.new dbigcg.1e man --recode UTF-8 ./martattributes\.1e > martattributes\.1e\.new chmod 0755 -- martattributes.1e.new chown 0:0 -- martattributes.1e.new mv -f martattributes.1e.new martattributes.1e man --recode UTF-8 ./edamisid\.1e > edamisid\.1e\.new chmod 0755 -- edamisid.1e.new chown 0:0 -- edamisid.1e.new mv -f edamisid.1e.new edamisid.1e man --recode UTF-8 ./checktrans\.1e > checktrans\.1e\.new chmod 0755 -- checktrans.1e.new chown 0:0 -- checktrans.1e.new mv -f checktrans.1e.new checktrans.1e man --recode UTF-8 ./seqcount\.1e > seqcount\.1e\.new chmod 0755 -- seqcount.1e.new chown 0:0 -- seqcount.1e.new mv -f seqcount.1e.new seqcount.1e man --recode UTF-8 ./eprimer32\.1e > eprimer32\.1e\.new chmod 0755 -- eprimer32.1e.new chown 0:0 -- eprimer32.1e.new mv -f eprimer32.1e.new eprimer32.1e man --recode UTF-8 ./origsplitter\.1e > origsplitter\.1e\.new chmod 0755 -- origsplitter.1e.new chown 0:0 -- origsplitter.1e.new mv -f origsplitter.1e.new origsplitter.1e man --recode UTF-8 ./mwcontam\.1e > mwcontam\.1e\.new chmod 0755 -- mwcontam.1e.new chown 0:0 -- mwcontam.1e.new mv -f mwcontam.1e.new mwcontam.1e man --recode UTF-8 ./charge\.1e > charge\.1e\.new chmod 0755 -- charge.1e.new chown 0:0 -- charge.1e.new mv -f charge.1e.new charge.1e man --recode UTF-8 ./wossparam\.1e > wossparam\.1e\.new chmod 0755 -- wossparam.1e.new chown 0:0 -- wossparam.1e.new mv -f wossparam.1e.new wossparam.1e man --recode UTF-8 ./notseq\.1e > notseq\.1e\.new chmod 0755 -- notseq.1e.new chown 0:0 -- notseq.1e.new mv -f notseq.1e.new notseq.1e man --recode UTF-8 ./primersearch\.1e > primersearch\.1e\.new chmod 0755 -- primersearch.1e.new chown 0:0 -- primersearch.1e.new mv -f primersearch.1e.new primersearch.1e man --recode UTF-8 ./dotpath\.1e > dotpath\.1e\.new chmod 0755 -- dotpath.1e.new chown 0:0 -- dotpath.1e.new mv -f dotpath.1e.new dotpath.1e man --recode UTF-8 ./urlget\.1e > urlget\.1e\.new chmod 0755 -- urlget.1e.new chown 0:0 -- urlget.1e.new mv -f urlget.1e.new urlget.1e man --recode UTF-8 ./ontogetdown\.1e > ontogetdown\.1e\.new chmod 0755 -- ontogetdown.1e.new chown 0:0 -- ontogetdown.1e.new mv -f ontogetdown.1e.new ontogetdown.1e man --recode UTF-8 ./needle\.1e > needle\.1e\.new chmod 0755 -- needle.1e.new chown 0:0 -- needle.1e.new mv -f needle.1e.new needle.1e man --recode UTF-8 ./tcode\.1e > tcode\.1e\.new chmod 0755 -- tcode.1e.new chown 0:0 -- tcode.1e.new mv -f tcode.1e.new tcode.1e man --recode UTF-8 ./godef\.1e > godef\.1e\.new chmod 0755 -- godef.1e.new chown 0:0 -- godef.1e.new mv -f godef.1e.new godef.1e man --recode UTF-8 ./abiview\.1e > abiview\.1e\.new chmod 0755 -- abiview.1e.new chown 0:0 -- abiview.1e.new mv -f abiview.1e.new abiview.1e man --recode UTF-8 ./patmatmotifs\.1e > patmatmotifs\.1e\.new chmod 0755 -- patmatmotifs.1e.new chown 0:0 -- patmatmotifs.1e.new mv -f patmatmotifs.1e.new patmatmotifs.1e man --recode UTF-8 ./dbxstat\.1e > dbxstat\.1e\.new chmod 0755 -- dbxstat.1e.new chown 0:0 -- dbxstat.1e.new mv -f dbxstat.1e.new dbxstat.1e man --recode UTF-8 ./acdc\.1e > acdc\.1e\.new chmod 0755 -- acdc.1e.new chown 0:0 -- acdc.1e.new mv -f acdc.1e.new acdc.1e man --recode UTF-8 ./dottup\.1e > dottup\.1e\.new chmod 0755 -- dottup.1e.new chown 0:0 -- dottup.1e.new mv -f dottup.1e.new dottup.1e man --recode UTF-8 ./seqretallfeat\.1e > seqretallfeat\.1e\.new chmod 0755 -- seqretallfeat.1e.new chown 0:0 -- seqretallfeat.1e.new mv -f seqretallfeat.1e.new seqretallfeat.1e man --recode UTF-8 ./antigenic\.1e > antigenic\.1e\.new chmod 0755 -- antigenic.1e.new chown 0:0 -- antigenic.1e.new mv -f antigenic.1e.new antigenic.1e man --recode UTF-8 ./chips\.1e > chips\.1e\.new chmod 0755 -- chips.1e.new chown 0:0 -- chips.1e.new mv -f chips.1e.new chips.1e man --recode UTF-8 ./wossoperation\.1e > wossoperation\.1e\.new chmod 0755 -- wossoperation.1e.new chown 0:0 -- wossoperation.1e.new mv -f wossoperation.1e.new wossoperation.1e man --recode UTF-8 ./drfindresource\.1e > drfindresource\.1e\.new chmod 0755 -- drfindresource.1e.new chown 0:0 -- drfindresource.1e.new mv -f drfindresource.1e.new drfindresource.1e man --recode UTF-8 ./rebaseextract\.1e > rebaseextract\.1e\.new chmod 0755 -- rebaseextract.1e.new chown 0:0 -- rebaseextract.1e.new mv -f rebaseextract.1e.new rebaseextract.1e man --recode UTF-8 ./acdrelations\.1e > acdrelations\.1e\.new chmod 0755 -- acdrelations.1e.new chown 0:0 -- acdrelations.1e.new mv -f acdrelations.1e.new acdrelations.1e man --recode UTF-8 ./matcher\.1e > matcher\.1e\.new chmod 0755 -- matcher.1e.new chown 0:0 -- matcher.1e.new mv -f matcher.1e.new matcher.1e man --recode UTF-8 ./aligncopy\.1e > aligncopy\.1e\.new chmod 0755 -- aligncopy.1e.new chown 0:0 -- aligncopy.1e.new mv -f aligncopy.1e.new aligncopy.1e man --recode UTF-8 ./sixpack\.1e > sixpack\.1e\.new chmod 0755 -- sixpack.1e.new chown 0:0 -- sixpack.1e.new mv -f sixpack.1e.new sixpack.1e man --recode UTF-8 ./tranalign\.1e > tranalign\.1e\.new chmod 0755 -- tranalign.1e.new chown 0:0 -- tranalign.1e.new mv -f tranalign.1e.new tranalign.1e man --recode UTF-8 ./dbget\.1e > dbget\.1e\.new chmod 0755 -- dbget.1e.new chown 0:0 -- dbget.1e.new mv -f dbget.1e.new dbget.1e man --recode UTF-8 ./wobble\.1e > wobble\.1e\.new chmod 0755 -- wobble.1e.new chown 0:0 -- wobble.1e.new mv -f wobble.1e.new wobble.1e man --recode UTF-8 ./trimspace\.1e > trimspace\.1e\.new chmod 0755 -- trimspace.1e.new chown 0:0 -- trimspace.1e.new mv -f trimspace.1e.new trimspace.1e man --recode UTF-8 ./drget\.1e > drget\.1e\.new chmod 0755 -- drget.1e.new chown 0:0 -- drget.1e.new mv -f drget.1e.new drget.1e man --recode UTF-8 ./mwfilter\.1e > mwfilter\.1e\.new chmod 0755 -- mwfilter.1e.new chown 0:0 -- mwfilter.1e.new mv -f mwfilter.1e.new mwfilter.1e man --recode UTF-8 ./helixturnhelix\.1e > helixturnhelix\.1e\.new chmod 0755 -- helixturnhelix.1e.new chown 0:0 -- helixturnhelix.1e.new mv -f helixturnhelix.1e.new helixturnhelix.1e man --recode UTF-8 ./dbtell\.1e > dbtell\.1e\.new chmod 0755 -- dbtell.1e.new chown 0:0 -- dbtell.1e.new mv -f dbtell.1e.new dbtell.1e man --recode UTF-8 ./drfinddata\.1e > drfinddata\.1e\.new chmod 0755 -- drfinddata.1e.new chown 0:0 -- drfinddata.1e.new mv -f drfinddata.1e.new drfinddata.1e man --recode UTF-8 ./remap\.1e > remap\.1e\.new chmod 0755 -- remap.1e.new chown 0:0 -- remap.1e.new mv -f remap.1e.new remap.1e man --recode UTF-8 ./patmattest\.1e > patmattest\.1e\.new chmod 0755 -- patmattest.1e.new chown 0:0 -- patmattest.1e.new mv -f patmattest.1e.new patmattest.1e man --recode UTF-8 ./lindna\.1e > lindna\.1e\.new chmod 0755 -- lindna.1e.new chown 0:0 -- lindna.1e.new mv -f lindna.1e.new lindna.1e man --recode UTF-8 ./taxgetdown\.1e > taxgetdown\.1e\.new chmod 0755 -- taxgetdown.1e.new chown 0:0 -- taxgetdown.1e.new mv -f taxgetdown.1e.new taxgetdown.1e man --recode UTF-8 ./textvalid\.1e > textvalid\.1e\.new chmod 0755 -- textvalid.1e.new chown 0:0 -- textvalid.1e.new mv -f textvalid.1e.new textvalid.1e man --recode UTF-8 ./showserver\.1e > showserver\.1e\.new chmod 0755 -- showserver.1e.new chown 0:0 -- showserver.1e.new mv -f showserver.1e.new showserver.1e man --recode UTF-8 ./palindrome\.1e > palindrome\.1e\.new chmod 0755 -- palindrome.1e.new chown 0:0 -- palindrome.1e.new mv -f palindrome.1e.new palindrome.1e man --recode UTF-8 ./showorf\.1e > showorf\.1e\.new chmod 0755 -- showorf.1e.new chown 0:0 -- showorf.1e.new mv -f showorf.1e.new showorf.1e man --recode UTF-8 ./ajbad\.1e > ajbad\.1e\.new chmod 0755 -- ajbad.1e.new chown 0:0 -- ajbad.1e.new mv -f ajbad.1e.new ajbad.1e man --recode UTF-8 ./fuzzpro\.1e > fuzzpro\.1e\.new chmod 0755 -- fuzzpro.1e.new chown 0:0 -- fuzzpro.1e.new mv -f fuzzpro.1e.new fuzzpro.1e man --recode UTF-8 ./dbxtax\.1e > dbxtax\.1e\.new chmod 0755 -- dbxtax.1e.new chown 0:0 -- dbxtax.1e.new mv -f dbxtax.1e.new dbxtax.1e man --recode UTF-8 ./domtestc\.1e > domtestc\.1e\.new chmod 0755 -- domtestc.1e.new chown 0:0 -- domtestc.1e.new mv -f domtestc.1e.new domtestc.1e man --recode UTF-8 ./ontoget\.1e > ontoget\.1e\.new chmod 0755 -- ontoget.1e.new chown 0:0 -- ontoget.1e.new mv -f ontoget.1e.new ontoget.1e man --recode UTF-8 ./freak\.1e > freak\.1e\.new chmod 0755 -- freak.1e.new chown 0:0 -- freak.1e.new mv -f freak.1e.new freak.1e man --recode UTF-8 ./union\.1e > union\.1e\.new chmod 0755 -- union.1e.new chown 0:0 -- union.1e.new mv -f union.1e.new union.1e man --recode UTF-8 ./xmltotext\.1e > xmltotext\.1e\.new chmod 0755 -- xmltotext.1e.new chown 0:0 -- xmltotext.1e.new mv -f xmltotext.1e.new xmltotext.1e man --recode UTF-8 ./seqretset\.1e > seqretset\.1e\.new chmod 0755 -- seqretset.1e.new chown 0:0 -- seqretset.1e.new mv -f seqretset.1e.new seqretset.1e man --recode UTF-8 ./xmltoxml\.1e > xmltoxml\.1e\.new chmod 0755 -- xmltoxml.1e.new chown 0:0 -- xmltoxml.1e.new mv -f xmltoxml.1e.new xmltoxml.1e man --recode UTF-8 ./cutseq\.1e > cutseq\.1e\.new chmod 0755 -- cutseq.1e.new chown 0:0 -- cutseq.1e.new mv -f cutseq.1e.new cutseq.1e man --recode UTF-8 ./edamhasoutput\.1e > edamhasoutput\.1e\.new chmod 0755 -- edamhasoutput.1e.new chown 0:0 -- edamhasoutput.1e.new mv -f edamhasoutput.1e.new edamhasoutput.1e man --recode UTF-8 ./ensembltest\.1e > ensembltest\.1e\.new chmod 0755 -- ensembltest.1e.new chown 0:0 -- ensembltest.1e.new mv -f ensembltest.1e.new ensembltest.1e man --recode UTF-8 ./backtranseq\.1e > backtranseq\.1e\.new chmod 0755 -- backtranseq.1e.new chown 0:0 -- backtranseq.1e.new mv -f backtranseq.1e.new backtranseq.1e man --recode UTF-8 ./cacheensembl\.1e > cacheensembl\.1e\.new chmod 0755 -- cacheensembl.1e.new chown 0:0 -- cacheensembl.1e.new mv -f cacheensembl.1e.new cacheensembl.1e man --recode UTF-8 ./sizeseq\.1e > sizeseq\.1e\.new chmod 0755 -- sizeseq.1e.new chown 0:0 -- sizeseq.1e.new mv -f sizeseq.1e.new sizeseq.1e man --recode UTF-8 ./infobase\.1e > infobase\.1e\.new chmod 0755 -- infobase.1e.new chown 0:0 -- infobase.1e.new mv -f infobase.1e.new infobase.1e man --recode UTF-8 ./newseq\.1e > newseq\.1e\.new chmod 0755 -- newseq.1e.new chown 0:0 -- newseq.1e.new mv -f newseq.1e.new newseq.1e man --recode UTF-8 ./syco\.1e > syco\.1e\.new chmod 0755 -- syco.1e.new chown 0:0 -- syco.1e.new mv -f syco.1e.new syco.1e man --recode UTF-8 ./makenucseq\.1e > makenucseq\.1e\.new chmod 0755 -- makenucseq.1e.new chown 0:0 -- makenucseq.1e.new mv -f makenucseq.1e.new makenucseq.1e man --recode UTF-8 ./cusp\.1e > cusp\.1e\.new chmod 0755 -- cusp.1e.new chown 0:0 -- cusp.1e.new mv -f cusp.1e.new cusp.1e man --recode UTF-8 ./cpgplot\.1e > cpgplot\.1e\.new chmod 0755 -- cpgplot.1e.new chown 0:0 -- cpgplot.1e.new mv -f cpgplot.1e.new cpgplot.1e man --recode UTF-8 ./embossdata\.1e > embossdata\.1e\.new chmod 0755 -- embossdata.1e.new chown 0:0 -- embossdata.1e.new mv -f embossdata.1e.new embossdata.1e man --recode UTF-8 ./inforesidue\.1e > inforesidue\.1e\.new chmod 0755 -- inforesidue.1e.new chown 0:0 -- inforesidue.1e.new mv -f inforesidue.1e.new inforesidue.1e man --recode UTF-8 ./dastest\.1e > dastest\.1e\.new chmod 0755 -- dastest.1e.new chown 0:0 -- dastest.1e.new mv -f dastest.1e.new dastest.1e man --recode UTF-8 ./dbshowdat\.1e > dbshowdat\.1e\.new chmod 0755 -- dbshowdat.1e.new chown 0:0 -- dbshowdat.1e.new mv -f dbshowdat.1e.new dbshowdat.1e man --recode UTF-8 ./trimest\.1e > trimest\.1e\.new chmod 0755 -- trimest.1e.new chown 0:0 -- trimest.1e.new mv -f trimest.1e.new trimest.1e man --recode UTF-8 ./taxseq\.1e > taxseq\.1e\.new chmod 0755 -- taxseq.1e.new chown 0:0 -- taxseq.1e.new mv -f taxseq.1e.new taxseq.1e man --recode UTF-8 ./compseq\.1e > compseq\.1e\.new chmod 0755 -- compseq.1e.new chown 0:0 -- compseq.1e.new mv -f compseq.1e.new compseq.1e man --recode UTF-8 ./domtesta\.1e > domtesta\.1e\.new chmod 0755 -- domtesta.1e.new chown 0:0 -- domtesta.1e.new mv -f domtesta.1e.new domtesta.1e man --recode UTF-8 ./dbxcompress\.1e > dbxcompress\.1e\.new chmod 0755 -- dbxcompress.1e.new chown 0:0 -- dbxcompress.1e.new mv -f dbxcompress.1e.new dbxcompress.1e man --recode UTF-8 ./maskfeat\.1e > maskfeat\.1e\.new chmod 0755 -- maskfeat.1e.new chown 0:0 -- maskfeat.1e.new mv -f maskfeat.1e.new maskfeat.1e man --recode UTF-8 ./newcpgreport\.1e > newcpgreport\.1e\.new chmod 0755 -- newcpgreport.1e.new chown 0:0 -- newcpgreport.1e.new mv -f newcpgreport.1e.new newcpgreport.1e man --recode UTF-8 ./hmoment\.1e > hmoment\.1e\.new chmod 0755 -- hmoment.1e.new chown 0:0 -- hmoment.1e.new mv -f hmoment.1e.new hmoment.1e man --recode UTF-8 ./seqretsingle\.1e > seqretsingle\.1e\.new chmod 0755 -- seqretsingle.1e.new chown 0:0 -- seqretsingle.1e.new mv -f seqretsingle.1e.new seqretsingle.1e man --recode UTF-8 ./pepinfo\.1e > pepinfo\.1e\.new chmod 0755 -- pepinfo.1e.new chown 0:0 -- pepinfo.1e.new mv -f pepinfo.1e.new pepinfo.1e man --recode UTF-8 ./fuzznuc\.1e > fuzznuc\.1e\.new chmod 0755 -- fuzznuc.1e.new chown 0:0 -- fuzznuc.1e.new mv -f fuzznuc.1e.new fuzznuc.1e man --recode UTF-8 ./yank\.1e > yank\.1e\.new chmod 0755 -- yank.1e.new chown 0:0 -- yank.1e.new mv -f yank.1e.new yank.1e man --recode UTF-8 ./degapseq\.1e > degapseq\.1e\.new chmod 0755 -- degapseq.1e.new chown 0:0 -- degapseq.1e.new mv -f degapseq.1e.new degapseq.1e man --recode UTF-8 ./dbshowquery\.1e > dbshowquery\.1e\.new chmod 0755 -- dbshowquery.1e.new chown 0:0 -- dbshowquery.1e.new mv -f dbshowquery.1e.new dbshowquery.1e man --recode UTF-8 ./seqretsetall\.1e > seqretsetall\.1e\.new chmod 0755 -- seqretsetall.1e.new chown 0:0 -- seqretsetall.1e.new mv -f seqretsetall.1e.new seqretsetall.1e man --recode UTF-8 ./newcpgseek\.1e > newcpgseek\.1e\.new chmod 0755 -- newcpgseek.1e.new chown 0:0 -- newcpgseek.1e.new mv -f newcpgseek.1e.new newcpgseek.1e man --recode UTF-8 ./isochore\.1e > isochore\.1e\.new chmod 0755 -- isochore.1e.new chown 0:0 -- isochore.1e.new mv -f isochore.1e.new isochore.1e man --recode UTF-8 ./showfeat\.1e > showfeat\.1e\.new chmod 0755 -- showfeat.1e.new chown 0:0 -- showfeat.1e.new mv -f showfeat.1e.new showfeat.1e man --recode UTF-8 ./dbxedam\.1e > dbxedam\.1e\.new chmod 0755 -- dbxedam.1e.new chown 0:0 -- dbxedam.1e.new mv -f dbxedam.1e.new dbxedam.1e man --recode UTF-8 ./entrygo\.1e > entrygo\.1e\.new chmod 0755 -- entrygo.1e.new chown 0:0 -- entrygo.1e.new mv -f entrygo.1e.new entrygo.1e man --recode UTF-8 ./entrailsbook\.1e > entrailsbook\.1e\.new chmod 0755 -- entrailsbook.1e.new chown 0:0 -- entrailsbook.1e.new mv -f entrailsbook.1e.new entrailsbook.1e man --recode UTF-8 ./seqxrefget\.1e > seqxrefget\.1e\.new chmod 0755 -- seqxrefget.1e.new chown 0:0 -- seqxrefget.1e.new mv -f seqxrefget.1e.new seqxrefget.1e man --recode UTF-8 ./codcopy\.1e > codcopy\.1e\.new chmod 0755 -- codcopy.1e.new chown 0:0 -- codcopy.1e.new mv -f codcopy.1e.new codcopy.1e man --recode UTF-8 ./maskseq\.1e > maskseq\.1e\.new chmod 0755 -- maskseq.1e.new chown 0:0 -- maskseq.1e.new mv -f maskseq.1e.new maskseq.1e man --recode UTF-8 ./polydot\.1e > polydot\.1e\.new chmod 0755 -- polydot.1e.new chown 0:0 -- polydot.1e.new mv -f polydot.1e.new polydot.1e man --recode UTF-8 ./stretcher\.1e > stretcher\.1e\.new chmod 0755 -- stretcher.1e.new chown 0:0 -- stretcher.1e.new mv -f stretcher.1e.new stretcher.1e man --recode UTF-8 ./seqret\.1e > seqret\.1e\.new chmod 0755 -- seqret.1e.new chown 0:0 -- seqret.1e.new mv -f seqret.1e.new seqret.1e man --recode UTF-8 ./digest\.1e > digest\.1e\.new chmod 0755 -- digest.1e.new chown 0:0 -- digest.1e.new mv -f digest.1e.new digest.1e man --recode UTF-8 ./idtell\.1e > idtell\.1e\.new chmod 0755 -- idtell.1e.new chown 0:0 -- idtell.1e.new mv -f idtell.1e.new idtell.1e man --recode UTF-8 ./nthseq\.1e > nthseq\.1e\.new chmod 0755 -- nthseq.1e.new chown 0:0 -- nthseq.1e.new mv -f nthseq.1e.new nthseq.1e man --recode UTF-8 ./water\.1e > water\.1e\.new chmod 0755 -- water.1e.new chown 0:0 -- water.1e.new mv -f water.1e.new water.1e man --recode UTF-8 ./pepdigest\.1e > pepdigest\.1e\.new chmod 0755 -- pepdigest.1e.new chown 0:0 -- pepdigest.1e.new mv -f pepdigest.1e.new pepdigest.1e man --recode UTF-8 ./martseqs\.1e > martseqs\.1e\.new chmod 0755 -- martseqs.1e.new chown 0:0 -- martseqs.1e.new mv -f martseqs.1e.new martseqs.1e man --recode UTF-8 ./cacheebeyesearch\.1e > cacheebeyesearch\.1e\.new chmod 0755 -- cacheebeyesearch.1e.new chown 0:0 -- cacheebeyesearch.1e.new mv -f cacheebeyesearch.1e.new cacheebeyesearch.1e man --recode UTF-8 ./restrict\.1e > restrict\.1e\.new chmod 0755 -- restrict.1e.new chown 0:0 -- restrict.1e.new mv -f restrict.1e.new restrict.1e man --recode UTF-8 ./diffseq\.1e > diffseq\.1e\.new chmod 0755 -- diffseq.1e.new chown 0:0 -- diffseq.1e.new mv -f diffseq.1e.new diffseq.1e man --recode UTF-8 ./recoder\.1e > recoder\.1e\.new chmod 0755 -- recoder.1e.new chown 0:0 -- recoder.1e.new mv -f recoder.1e.new recoder.1e man --recode UTF-8 ./showalign\.1e > showalign\.1e\.new chmod 0755 -- showalign.1e.new chown 0:0 -- showalign.1e.new mv -f showalign.1e.new showalign.1e man --recode UTF-8 ./restover\.1e > restover\.1e\.new chmod 0755 -- restover.1e.new chown 0:0 -- restover.1e.new mv -f restover.1e.new restover.1e man --recode UTF-8 ./dbxflat\.1e > dbxflat\.1e\.new chmod 0755 -- dbxflat.1e.new chown 0:0 -- dbxflat.1e.new mv -f dbxflat.1e.new dbxflat.1e man --recode UTF-8 ./plotcon\.1e > plotcon\.1e\.new chmod 0755 -- plotcon.1e.new chown 0:0 -- plotcon.1e.new mv -f plotcon.1e.new plotcon.1e man --recode UTF-8 ./btwisted\.1e > btwisted\.1e\.new chmod 0755 -- btwisted.1e.new chown 0:0 -- btwisted.1e.new mv -f btwisted.1e.new btwisted.1e man --recode UTF-8 ./cpgreport\.1e > cpgreport\.1e\.new chmod 0755 -- cpgreport.1e.new chown 0:0 -- cpgreport.1e.new mv -f cpgreport.1e.new cpgreport.1e man --recode UTF-8 ./extractalign\.1e > extractalign\.1e\.new chmod 0755 -- extractalign.1e.new chown 0:0 -- extractalign.1e.new mv -f extractalign.1e.new extractalign.1e man --recode UTF-8 ./texttotext\.1e > texttotext\.1e\.new chmod 0755 -- texttotext.1e.new chown 0:0 -- texttotext.1e.new mv -f texttotext.1e.new texttotext.1e man --recode UTF-8 ./redata\.1e > redata\.1e\.new chmod 0755 -- redata.1e.new chown 0:0 -- redata.1e.new mv -f redata.1e.new redata.1e man --recode UTF-8 ./tfscan\.1e > tfscan\.1e\.new chmod 0755 -- tfscan.1e.new chown 0:0 -- tfscan.1e.new mv -f tfscan.1e.new tfscan.1e man --recode UTF-8 ./dbxfasta\.1e > dbxfasta\.1e\.new chmod 0755 -- dbxfasta.1e.new chown 0:0 -- dbxfasta.1e.new mv -f dbxfasta.1e.new dbxfasta.1e man --recode UTF-8 ./extractseq\.1e > extractseq\.1e\.new chmod 0755 -- extractseq.1e.new chown 0:0 -- extractseq.1e.new mv -f extractseq.1e.new extractseq.1e man --recode UTF-8 ./skipseq\.1e > skipseq\.1e\.new chmod 0755 -- skipseq.1e.new chown 0:0 -- skipseq.1e.new mv -f skipseq.1e.new skipseq.1e man --recode UTF-8 ./isdbname\.1e > isdbname\.1e\.new chmod 0755 -- isdbname.1e.new chown 0:0 -- isdbname.1e.new mv -f isdbname.1e.new isdbname.1e man --recode UTF-8 ./eprimer3\.1e > eprimer3\.1e\.new chmod 0755 -- eprimer3.1e.new chown 0:0 -- eprimer3.1e.new mv -f eprimer3.1e.new eprimer3.1e man --recode UTF-8 ./tmap\.1e > tmap\.1e\.new chmod 0755 -- tmap.1e.new chown 0:0 -- tmap.1e.new mv -f tmap.1e.new tmap.1e man --recode UTF-8 ./findkm\.1e > findkm\.1e\.new chmod 0755 -- findkm.1e.new chown 0:0 -- findkm.1e.new mv -f findkm.1e.new findkm.1e man --recode UTF-8 ./testplot\.1e > testplot\.1e\.new chmod 0755 -- testplot.1e.new chown 0:0 -- testplot.1e.new mv -f testplot.1e.new testplot.1e man --recode UTF-8 ./seqretall\.1e > seqretall\.1e\.new chmod 0755 -- seqretall.1e.new chown 0:0 -- seqretall.1e.new mv -f seqretall.1e.new seqretall.1e man --recode UTF-8 ./plotorf\.1e > plotorf\.1e\.new chmod 0755 -- plotorf.1e.new chown 0:0 -- plotorf.1e.new mv -f plotorf.1e.new plotorf.1e man --recode UTF-8 ./needleall\.1e > needleall\.1e\.new chmod 0755 -- needleall.1e.new chown 0:0 -- needleall.1e.new mv -f needleall.1e.new needleall.1e man --recode UTF-8 ./texttoxml\.1e > texttoxml\.1e\.new chmod 0755 -- texttoxml.1e.new chown 0:0 -- texttoxml.1e.new mv -f texttoxml.1e.new texttoxml.1e man --recode UTF-8 ./backtranambig\.1e > backtranambig\.1e\.new chmod 0755 -- backtranambig.1e.new chown 0:0 -- backtranambig.1e.new mv -f backtranambig.1e.new backtranambig.1e man --recode UTF-8 ./maskambigprot\.1e > maskambigprot\.1e\.new chmod 0755 -- maskambigprot.1e.new chown 0:0 -- maskambigprot.1e.new mv -f maskambigprot.1e.new maskambigprot.1e man --recode UTF-8 ./dbtellquery\.1e > dbtellquery\.1e\.new chmod 0755 -- dbtellquery.1e.new chown 0:0 -- dbtellquery.1e.new mv -f dbtellquery.1e.new dbtellquery.1e man --recode UTF-8 ./featcopy\.1e > featcopy\.1e\.new chmod 0755 -- featcopy.1e.new chown 0:0 -- featcopy.1e.new mv -f featcopy.1e.new featcopy.1e man --recode UTF-8 ./geecee\.1e > geecee\.1e\.new chmod 0755 -- geecee.1e.new chown 0:0 -- geecee.1e.new mv -f geecee.1e.new geecee.1e man --recode UTF-8 ./infoseq\.1e > infoseq\.1e\.new chmod 0755 -- infoseq.1e.new chown 0:0 -- infoseq.1e.new mv -f infoseq.1e.new infoseq.1e man --recode UTF-8 ./est2genome\.1e > est2genome\.1e\.new chmod 0755 -- est2genome.1e.new chown 0:0 -- est2genome.1e.new mv -f est2genome.1e.new est2genome.1e man --recode UTF-8 ./dbxresource\.1e > dbxresource\.1e\.new chmod 0755 -- dbxresource.1e.new chown 0:0 -- dbxresource.1e.new mv -f dbxresource.1e.new dbxresource.1e man --recode UTF-8 ./getorf\.1e > getorf\.1e\.new chmod 0755 -- getorf.1e.new chown 0:0 -- getorf.1e.new mv -f getorf.1e.new getorf.1e man --recode UTF-8 ./histogramtest\.1e > histogramtest\.1e\.new chmod 0755 -- histogramtest.1e.new chown 0:0 -- histogramtest.1e.new mv -f histogramtest.1e.new histogramtest.1e man --recode UTF-8 ./origunion\.1e > origunion\.1e\.new chmod 0755 -- origunion.1e.new chown 0:0 -- origunion.1e.new mv -f origunion.1e.new origunion.1e man --recode UTF-8 ./embossversion\.1e > embossversion\.1e\.new chmod 0755 -- embossversion.1e.new chown 0:0 -- embossversion.1e.new mv -f embossversion.1e.new embossversion.1e man --recode UTF-8 ./docxmlwell\.1e > docxmlwell\.1e\.new chmod 0755 -- docxmlwell.1e.new chown 0:0 -- docxmlwell.1e.new mv -f docxmlwell.1e.new docxmlwell.1e man --recode UTF-8 ./dbxgcg\.1e > dbxgcg\.1e\.new chmod 0755 -- dbxgcg.1e.new chown 0:0 -- dbxgcg.1e.new mv -f dbxgcg.1e.new dbxgcg.1e man --recode UTF-8 ./showdb\.1e > showdb\.1e\.new chmod 0755 -- showdb.1e.new chown 0:0 -- showdb.1e.new mv -f showdb.1e.new showdb.1e man --recode UTF-8 ./wosstopic\.1e > wosstopic\.1e\.new chmod 0755 -- wosstopic.1e.new chown 0:0 -- wosstopic.1e.new mv -f wosstopic.1e.new wosstopic.1e man --recode UTF-8 ./prosextract\.1e > prosextract\.1e\.new chmod 0755 -- prosextract.1e.new chown 0:0 -- prosextract.1e.new mv -f prosextract.1e.new prosextract.1e man --recode UTF-8 ./megamerger\.1e > megamerger\.1e\.new chmod 0755 -- megamerger.1e.new chown 0:0 -- megamerger.1e.new mv -f megamerger.1e.new megamerger.1e man --recode UTF-8 ./extractfeat\.1e > extractfeat\.1e\.new chmod 0755 -- extractfeat.1e.new chown 0:0 -- extractfeat.1e.new mv -f extractfeat.1e.new extractfeat.1e man --recode UTF-8 ./taxgetspecies\.1e > taxgetspecies\.1e\.new chmod 0755 -- taxgetspecies.1e.new chown 0:0 -- taxgetspecies.1e.new mv -f taxgetspecies.1e.new taxgetspecies.1e man --recode UTF-8 ./iep\.1e > iep\.1e\.new chmod 0755 -- iep.1e.new chown 0:0 -- iep.1e.new mv -f iep.1e.new iep.1e man --recode UTF-8 ./coderet\.1e > coderet\.1e\.new chmod 0755 -- coderet.1e.new chown 0:0 -- coderet.1e.new mv -f coderet.1e.new coderet.1e man --recode UTF-8 ./pasteseq\.1e > pasteseq\.1e\.new chmod 0755 -- pasteseq.1e.new chown 0:0 -- pasteseq.1e.new mv -f pasteseq.1e.new pasteseq.1e man --recode UTF-8 ./acdlog\.1e > acdlog\.1e\.new chmod 0755 -- acdlog.1e.new chown 0:0 -- acdlog.1e.new mv -f acdlog.1e.new acdlog.1e man --recode UTF-8 ./distmat\.1e > distmat\.1e\.new chmod 0755 -- distmat.1e.new chown 0:0 -- distmat.1e.new mv -f distmat.1e.new distmat.1e man --recode UTF-8 ./einverted\.1e > einverted\.1e\.new chmod 0755 -- einverted.1e.new chown 0:0 -- einverted.1e.new mv -f einverted.1e.new einverted.1e man --recode UTF-8 ./skipredundant\.1e > skipredundant\.1e\.new chmod 0755 -- skipredundant.1e.new chown 0:0 -- skipredundant.1e.new mv -f skipredundant.1e.new skipredundant.1e man --recode UTF-8 ./intconv\.1e > intconv\.1e\.new chmod 0755 -- intconv.1e.new chown 0:0 -- intconv.1e.new mv -f intconv.1e.new intconv.1e man --recode UTF-8 ./dan\.1e > dan\.1e\.new chmod 0755 -- dan.1e.new chown 0:0 -- dan.1e.new mv -f dan.1e.new dan.1e man --recode UTF-8 ./wossinput\.1e > wossinput\.1e\.new chmod 0755 -- wossinput.1e.new chown 0:0 -- wossinput.1e.new mv -f wossinput.1e.new wossinput.1e man --recode UTF-8 ./wossoutput\.1e > wossoutput\.1e\.new chmod 0755 -- wossoutput.1e.new chown 0:0 -- wossoutput.1e.new mv -f wossoutput.1e.new wossoutput.1e man --recode UTF-8 ./prima\.1e > prima\.1e\.new chmod 0755 -- prima.1e.new chown 0:0 -- prima.1e.new mv -f prima.1e.new prima.1e man --recode UTF-8 ./featreport\.1e > featreport\.1e\.new chmod 0755 -- featreport.1e.new chown 0:0 -- featreport.1e.new mv -f featreport.1e.new featreport.1e man --recode UTF-8 ./acdvalid\.1e > acdvalid\.1e\.new chmod 0755 -- acdvalid.1e.new chown 0:0 -- acdvalid.1e.new mv -f acdvalid.1e.new acdvalid.1e man --recode UTF-8 ./supermatcher\.1e > supermatcher\.1e\.new chmod 0755 -- supermatcher.1e.new chown 0:0 -- supermatcher.1e.new mv -f supermatcher.1e.new supermatcher.1e man --recode UTF-8 ./showseq\.1e > showseq\.1e\.new chmod 0755 -- showseq.1e.new chown 0:0 -- showseq.1e.new mv -f showseq.1e.new showseq.1e man --recode UTF-8 ./ontogetcommon\.1e > ontogetcommon\.1e\.new chmod 0755 -- ontogetcommon.1e.new chown 0:0 -- ontogetcommon.1e.new mv -f ontogetcommon.1e.new ontogetcommon.1e man --recode UTF-8 ./entret\.1e > entret\.1e\.new chmod 0755 -- entret.1e.new chown 0:0 -- entret.1e.new mv -f entret.1e.new entret.1e man --recode UTF-8 ./msbar\.1e > msbar\.1e\.new chmod 0755 -- msbar.1e.new chown 0:0 -- msbar.1e.new mv -f msbar.1e.new msbar.1e man --recode UTF-8 ./pepwindowall\.1e > pepwindowall\.1e\.new chmod 0755 -- pepwindowall.1e.new chown 0:0 -- pepwindowall.1e.new mv -f pepwindowall.1e.new pepwindowall.1e man --recode UTF-8 ./dbiblast\.1e > dbiblast\.1e\.new chmod 0755 -- dbiblast.1e.new chown 0:0 -- dbiblast.1e.new mv -f dbiblast.1e.new dbiblast.1e man --recode UTF-8 ./whichdb\.1e > whichdb\.1e\.new chmod 0755 -- whichdb.1e.new chown 0:0 -- whichdb.1e.new mv -f whichdb.1e.new whichdb.1e man --recode UTF-8 ./nthseqset\.1e > nthseqset\.1e\.new chmod 0755 -- nthseqset.1e.new chown 0:0 -- nthseqset.1e.new mv -f nthseqset.1e.new nthseqset.1e man --recode UTF-8 ./biosed\.1e > biosed\.1e\.new chmod 0755 -- biosed.1e.new chown 0:0 -- biosed.1e.new mv -f biosed.1e.new biosed.1e man --recode UTF-8 ./epestfind\.1e > epestfind\.1e\.new chmod 0755 -- epestfind.1e.new chown 0:0 -- epestfind.1e.new mv -f epestfind.1e.new epestfind.1e man --recode UTF-8 ./fuzztran\.1e > fuzztran\.1e\.new chmod 0755 -- fuzztran.1e.new chown 0:0 -- fuzztran.1e.new mv -f fuzztran.1e.new fuzztran.1e man --recode UTF-8 ./prophecy\.1e > prophecy\.1e\.new chmod 0755 -- prophecy.1e.new chown 0:0 -- prophecy.1e.new mv -f prophecy.1e.new prophecy.1e man --recode UTF-8 ./silent\.1e > silent\.1e\.new chmod 0755 -- silent.1e.new chown 0:0 -- silent.1e.new mv -f silent.1e.new silent.1e man --recode UTF-8 ./entrailswiki\.1e > entrailswiki\.1e\.new chmod 0755 -- entrailswiki.1e.new chown 0:0 -- entrailswiki.1e.new mv -f entrailswiki.1e.new entrailswiki.1e man --recode UTF-8 ./twofeat\.1e > twofeat\.1e\.new chmod 0755 -- twofeat.1e.new chown 0:0 -- twofeat.1e.new mv -f twofeat.1e.new twofeat.1e man --recode UTF-8 ./seqtax\.1e > seqtax\.1e\.new chmod 0755 -- seqtax.1e.new chown 0:0 -- seqtax.1e.new mv -f seqtax.1e.new seqtax.1e man --recode UTF-8 ./domtestb\.1e > domtestb\.1e\.new chmod 0755 -- domtestb.1e.new chown 0:0 -- domtestb.1e.new mv -f domtestb.1e.new domtestb.1e man --recode UTF-8 ./aligncopypair\.1e > aligncopypair\.1e\.new chmod 0755 -- aligncopypair.1e.new chown 0:0 -- aligncopypair.1e.new mv -f aligncopypair.1e.new aligncopypair.1e man --recode UTF-8 ./dbiflat\.1e > dbiflat\.1e\.new chmod 0755 -- dbiflat.1e.new chown 0:0 -- dbiflat.1e.new mv -f dbiflat.1e.new dbiflat.1e man --recode UTF-8 ./tfm\.1e > tfm\.1e\.new chmod 0755 -- tfm.1e.new chown 0:0 -- tfm.1e.new mv -f tfm.1e.new tfm.1e man --recode UTF-8 ./sqltest\.1e > sqltest\.1e\.new chmod 0755 -- sqltest.1e.new chown 0:0 -- sqltest.1e.new mv -f sqltest.1e.new sqltest.1e man --recode UTF-8 ./dbxobo\.1e > dbxobo\.1e\.new chmod 0755 -- dbxobo.1e.new chown 0:0 -- dbxobo.1e.new mv -f dbxobo.1e.new dbxobo.1e man --recode UTF-8 ./dbxreport\.1e > dbxreport\.1e\.new chmod 0755 -- dbxreport.1e.new chown 0:0 -- dbxreport.1e.new mv -f dbxreport.1e.new dbxreport.1e man --recode UTF-8 ./ontogetroot\.1e > ontogetroot\.1e\.new chmod 0755 -- ontogetroot.1e.new chown 0:0 -- ontogetroot.1e.new mv -f ontogetroot.1e.new ontogetroot.1e man --recode UTF-8 ./edamisformat\.1e > edamisformat\.1e\.new chmod 0755 -- edamisformat.1e.new chown 0:0 -- edamisformat.1e.new mv -f edamisformat.1e.new edamisformat.1e man --recode UTF-8 ./showpep\.1e > showpep\.1e\.new chmod 0755 -- showpep.1e.new chown 0:0 -- showpep.1e.new mv -f showpep.1e.new showpep.1e man --recode UTF-8 ./wordfinder\.1e > wordfinder\.1e\.new chmod 0755 -- wordfinder.1e.new chown 0:0 -- wordfinder.1e.new mv -f wordfinder.1e.new wordfinder.1e man --recode UTF-8 ./cirdna\.1e > cirdna\.1e\.new chmod 0755 -- cirdna.1e.new chown 0:0 -- cirdna.1e.new mv -f cirdna.1e.new cirdna.1e man --recode UTF-8 ./infoalign\.1e > infoalign\.1e\.new chmod 0755 -- infoalign.1e.new chown 0:0 -- infoalign.1e.new mv -f infoalign.1e.new infoalign.1e man --recode UTF-8 ./cachedbfetch\.1e > cachedbfetch\.1e\.new chmod 0755 -- cachedbfetch.1e.new chown 0:0 -- cachedbfetch.1e.new mv -f cachedbfetch.1e.new cachedbfetch.1e man --recode UTF-8 ./vectorstrip\.1e > vectorstrip\.1e\.new chmod 0755 -- vectorstrip.1e.new chown 0:0 -- vectorstrip.1e.new mv -f vectorstrip.1e.new vectorstrip.1e man --recode UTF-8 ./ontoisobsolete\.1e > ontoisobsolete\.1e\.new chmod 0755 -- ontoisobsolete.1e.new chown 0:0 -- ontoisobsolete.1e.new mv -f ontoisobsolete.1e.new ontoisobsolete.1e man --recode UTF-8 ./prettyplot\.1e > prettyplot\.1e\.new chmod 0755 -- prettyplot.1e.new chown 0:0 -- prettyplot.1e.new mv -f prettyplot.1e.new prettyplot.1e man --recode UTF-8 ./nohtml\.1e > nohtml\.1e\.new chmod 0755 -- nohtml.1e.new chown 0:0 -- nohtml.1e.new mv -f nohtml.1e.new nohtml.1e man --recode UTF-8 ./martfilters\.1e > martfilters\.1e\.new chmod 0755 -- martfilters.1e.new chown 0:0 -- martfilters.1e.new mv -f martfilters.1e.new martfilters.1e for i in cons pscan ; \ do dh_link usr/share/man/man1/$i.1e.gz usr/share/man/man1/em_$i.1e.gz ; \ done rm -f debian/emboss/usr/share/doc/emboss/ChangeLog ln -sf changelog debian/emboss/usr/share/doc/emboss/ChangeLog rm -f debian/emboss/usr/bin/wossdata ln -sf ../lib/emboss/wossdata debian/emboss/usr/bin/wossdata rm -f debian/emboss/usr/bin/makeprotseq ln -sf ../lib/emboss/makeprotseq debian/emboss/usr/bin/makeprotseq rm -f debian/emboss/usr/bin/acdc ln -sf ../lib/emboss/acdc debian/emboss/usr/bin/acdc rm -f debian/emboss/usr/bin/backtranseq ln -sf ../lib/emboss/backtranseq debian/emboss/usr/bin/backtranseq rm -f debian/emboss/usr/bin/restover ln -sf ../lib/emboss/restover debian/emboss/usr/bin/restover rm -f debian/emboss/usr/bin/cacheensembl ln -sf ../lib/emboss/cacheensembl debian/emboss/usr/bin/cacheensembl rm -f debian/emboss/usr/bin/cutseq ln -sf ../lib/emboss/cutseq debian/emboss/usr/bin/cutseq rm -f debian/emboss/usr/bin/drfindformat ln -sf ../lib/emboss/drfindformat debian/emboss/usr/bin/drfindformat rm -f debian/emboss/usr/bin/marscan ln -sf ../lib/emboss/marscan debian/emboss/usr/bin/marscan rm -f debian/emboss/usr/bin/trimspace ln -sf ../lib/emboss/trimspace debian/emboss/usr/bin/trimspace rm -f debian/emboss/usr/bin/edamisid ln -sf ../lib/emboss/edamisid debian/emboss/usr/bin/edamisid rm -f debian/emboss/usr/bin/sizeseq ln -sf ../lib/emboss/sizeseq debian/emboss/usr/bin/sizeseq rm -f debian/emboss/usr/bin/oddcomp ln -sf ../lib/emboss/oddcomp debian/emboss/usr/bin/oddcomp rm -f debian/emboss/usr/bin/dbifasta ln -sf ../lib/emboss/dbifasta debian/emboss/usr/bin/dbifasta rm -f debian/emboss/usr/bin/edamhasinput ln -sf ../lib/emboss/edamhasinput debian/emboss/usr/bin/edamhasinput rm -f debian/emboss/usr/bin/taxgetspecies ln -sf ../lib/emboss/taxgetspecies debian/emboss/usr/bin/taxgetspecies rm -f debian/emboss/usr/bin/jaspscan ln -sf ../lib/emboss/jaspscan debian/emboss/usr/bin/jaspscan rm -f debian/emboss/usr/bin/einverted ln -sf ../lib/emboss/einverted debian/emboss/usr/bin/einverted rm -f debian/emboss/usr/bin/est2genome ln -sf ../lib/emboss/est2genome debian/emboss/usr/bin/est2genome rm -f debian/emboss/usr/bin/msbar ln -sf ../lib/emboss/msbar debian/emboss/usr/bin/msbar rm -f debian/emboss/usr/bin/tranalign ln -sf ../lib/emboss/tranalign debian/emboss/usr/bin/tranalign rm -f debian/emboss/usr/bin/btwisted ln -sf ../lib/emboss/btwisted debian/emboss/usr/bin/btwisted rm -f debian/emboss/usr/bin/cutgextract ln -sf ../lib/emboss/cutgextract debian/emboss/usr/bin/cutgextract rm -f debian/emboss/usr/bin/maskfeat ln -sf ../lib/emboss/maskfeat debian/emboss/usr/bin/maskfeat rm -f debian/emboss/usr/bin/dotpath ln -sf ../lib/emboss/dotpath debian/emboss/usr/bin/dotpath rm -f debian/emboss/usr/bin/dotmatcher ln -sf ../lib/emboss/dotmatcher debian/emboss/usr/bin/dotmatcher rm -f debian/emboss/usr/bin/seqxref ln -sf ../lib/emboss/seqxref debian/emboss/usr/bin/seqxref rm -f debian/emboss/usr/bin/featmerge ln -sf ../lib/emboss/featmerge debian/emboss/usr/bin/featmerge rm -f debian/emboss/usr/bin/edamhasoutput ln -sf ../lib/emboss/edamhasoutput debian/emboss/usr/bin/edamhasoutput rm -f debian/emboss/usr/bin/taxgetrank ln -sf ../lib/emboss/taxgetrank debian/emboss/usr/bin/taxgetrank rm -f debian/emboss/usr/bin/dbxuncompress ln -sf ../lib/emboss/dbxuncompress debian/emboss/usr/bin/dbxuncompress rm -f debian/emboss/usr/bin/tmap ln -sf ../lib/emboss/tmap debian/emboss/usr/bin/tmap rm -f debian/emboss/usr/bin/aaindexextract ln -sf ../lib/emboss/aaindexextract debian/emboss/usr/bin/aaindexextract rm -f debian/emboss/usr/bin/tfextract ln -sf ../lib/emboss/tfextract debian/emboss/usr/bin/tfextract rm -f debian/emboss/usr/bin/drget ln -sf ../lib/emboss/drget debian/emboss/usr/bin/drget rm -f debian/emboss/usr/bin/drfindid ln -sf ../lib/emboss/drfindid debian/emboss/usr/bin/drfindid rm -f debian/emboss/usr/bin/taxgetup ln -sf ../lib/emboss/taxgetup debian/emboss/usr/bin/taxgetup rm -f debian/emboss/usr/bin/helixturnhelix ln -sf ../lib/emboss/helixturnhelix debian/emboss/usr/bin/helixturnhelix rm -f debian/emboss/usr/bin/redata ln -sf ../lib/emboss/redata debian/emboss/usr/bin/redata rm -f debian/emboss/usr/bin/newseq ln -sf ../lib/emboss/newseq debian/emboss/usr/bin/newseq rm -f debian/emboss/usr/bin/xmltext ln -sf ../lib/emboss/xmltext debian/emboss/usr/bin/xmltext rm -f debian/emboss/usr/bin/psiphi ln -sf ../lib/emboss/psiphi debian/emboss/usr/bin/psiphi rm -f debian/emboss/usr/bin/drfinddata ln -sf ../lib/emboss/drfinddata debian/emboss/usr/bin/drfinddata rm -f debian/emboss/usr/bin/newcpgseek ln -sf ../lib/emboss/newcpgseek debian/emboss/usr/bin/newcpgseek rm -f debian/emboss/usr/bin/seqxrefget ln -sf ../lib/emboss/seqxrefget debian/emboss/usr/bin/seqxrefget rm -f debian/emboss/usr/bin/maskambigprot ln -sf ../lib/emboss/maskambigprot debian/emboss/usr/bin/maskambigprot rm -f debian/emboss/usr/bin/showalign ln -sf ../lib/emboss/showalign debian/emboss/usr/bin/showalign rm -f debian/emboss/usr/bin/cpgreport ln -sf ../lib/emboss/cpgreport debian/emboss/usr/bin/cpgreport rm -f debian/emboss/usr/bin/compseq ln -sf ../lib/emboss/compseq debian/emboss/usr/bin/compseq rm -f debian/emboss/usr/bin/wossname ln -sf ../lib/emboss/wossname debian/emboss/usr/bin/wossname rm -f debian/emboss/usr/bin/sirna ln -sf ../lib/emboss/sirna debian/emboss/usr/bin/sirna rm -f debian/emboss/usr/bin/showdb ln -sf ../lib/emboss/showdb debian/emboss/usr/bin/showdb rm -f debian/emboss/usr/bin/seqret ln -sf ../lib/emboss/seqret debian/emboss/usr/bin/seqret rm -f debian/emboss/usr/bin/xmlget ln -sf ../lib/emboss/xmlget debian/emboss/usr/bin/xmlget rm -f debian/emboss/usr/bin/patmatmotifs ln -sf ../lib/emboss/patmatmotifs debian/emboss/usr/bin/patmatmotifs rm -f debian/emboss/usr/bin/inforesidue ln -sf ../lib/emboss/inforesidue debian/emboss/usr/bin/inforesidue rm -f debian/emboss/usr/bin/entret ln -sf ../lib/emboss/entret debian/emboss/usr/bin/entret rm -f debian/emboss/usr/bin/chaos ln -sf ../lib/emboss/chaos debian/emboss/usr/bin/chaos rm -f debian/emboss/usr/bin/aligncopy ln -sf ../lib/emboss/aligncopy debian/emboss/usr/bin/aligncopy rm -f debian/emboss/usr/bin/infoseq ln -sf ../lib/emboss/infoseq debian/emboss/usr/bin/infoseq rm -f debian/emboss/usr/bin/seealso ln -sf ../lib/emboss/seealso debian/emboss/usr/bin/seealso rm -f debian/emboss/usr/bin/ontogetdown ln -sf ../lib/emboss/ontogetdown debian/emboss/usr/bin/ontogetdown rm -f debian/emboss/usr/bin/epestfind ln -sf ../lib/emboss/epestfind debian/emboss/usr/bin/epestfind rm -f debian/emboss/usr/bin/iep ln -sf ../lib/emboss/iep debian/emboss/usr/bin/iep rm -f debian/emboss/usr/bin/infoassembly ln -sf ../lib/emboss/infoassembly debian/emboss/usr/bin/infoassembly rm -f debian/emboss/usr/bin/cachedas ln -sf ../lib/emboss/cachedas debian/emboss/usr/bin/cachedas rm -f debian/emboss/usr/bin/supermatcher ln -sf ../lib/emboss/supermatcher debian/emboss/usr/bin/supermatcher rm -f debian/emboss/usr/bin/fuzzpro ln -sf ../lib/emboss/fuzzpro debian/emboss/usr/bin/fuzzpro rm -f debian/emboss/usr/bin/stssearch ln -sf ../lib/emboss/stssearch debian/emboss/usr/bin/stssearch rm -f debian/emboss/usr/bin/edamname ln -sf ../lib/emboss/edamname debian/emboss/usr/bin/edamname rm -f debian/emboss/usr/bin/pepinfo ln -sf ../lib/emboss/pepinfo debian/emboss/usr/bin/pepinfo rm -f debian/emboss/usr/bin/remap ln -sf ../lib/emboss/remap debian/emboss/usr/bin/remap rm -f debian/emboss/usr/bin/acdvalid ln -sf ../lib/emboss/acdvalid debian/emboss/usr/bin/acdvalid rm -f debian/emboss/usr/bin/splitter ln -sf ../lib/emboss/splitter debian/emboss/usr/bin/splitter rm -f debian/emboss/usr/bin/banana ln -sf ../lib/emboss/banana debian/emboss/usr/bin/banana rm -f debian/emboss/usr/bin/extractfeat ln -sf ../lib/emboss/extractfeat debian/emboss/usr/bin/extractfeat rm -f debian/emboss/usr/bin/dan ln -sf ../lib/emboss/dan debian/emboss/usr/bin/dan rm -f debian/emboss/usr/bin/acdgalaxy ln -sf ../lib/emboss/acdgalaxy debian/emboss/usr/bin/acdgalaxy rm -f debian/emboss/usr/bin/garnier ln -sf ../lib/emboss/garnier debian/emboss/usr/bin/garnier rm -f debian/emboss/usr/bin/wordfinder ln -sf ../lib/emboss/wordfinder debian/emboss/usr/bin/wordfinder rm -f debian/emboss/usr/bin/ontoget ln -sf ../lib/emboss/ontoget debian/emboss/usr/bin/ontoget rm -f debian/emboss/usr/bin/dbxobo ln -sf ../lib/emboss/dbxobo debian/emboss/usr/bin/dbxobo rm -f debian/emboss/usr/bin/dbxgcg ln -sf ../lib/emboss/dbxgcg debian/emboss/usr/bin/dbxgcg rm -f debian/emboss/usr/bin/godef ln -sf ../lib/emboss/godef debian/emboss/usr/bin/godef rm -f debian/emboss/usr/bin/feattext ln -sf ../lib/emboss/feattext debian/emboss/usr/bin/feattext rm -f debian/emboss/usr/bin/aligncopypair ln -sf ../lib/emboss/aligncopypair debian/emboss/usr/bin/aligncopypair rm -f debian/emboss/usr/bin/dbtell ln -sf ../lib/emboss/dbtell debian/emboss/usr/bin/dbtell rm -f debian/emboss/usr/bin/nthseqset ln -sf ../lib/emboss/nthseqset debian/emboss/usr/bin/nthseqset rm -f debian/emboss/usr/bin/rebaseextract ln -sf ../lib/emboss/rebaseextract debian/emboss/usr/bin/rebaseextract rm -f debian/emboss/usr/bin/patmatdb ln -sf ../lib/emboss/patmatdb debian/emboss/usr/bin/patmatdb rm -f debian/emboss/usr/bin/palindrome ln -sf ../lib/emboss/palindrome debian/emboss/usr/bin/palindrome rm -f debian/emboss/usr/bin/descseq ln -sf ../lib/emboss/descseq debian/emboss/usr/bin/descseq rm -f debian/emboss/usr/bin/profit ln -sf ../lib/emboss/profit debian/emboss/usr/bin/profit rm -f debian/emboss/usr/bin/pepwindowall ln -sf ../lib/emboss/pepwindowall debian/emboss/usr/bin/pepwindowall rm -f debian/emboss/usr/bin/extractalign ln -sf ../lib/emboss/extractalign debian/emboss/usr/bin/extractalign rm -f debian/emboss/usr/bin/showpep ln -sf ../lib/emboss/showpep debian/emboss/usr/bin/showpep rm -f debian/emboss/usr/bin/notab ln -sf ../lib/emboss/notab debian/emboss/usr/bin/notab rm -f debian/emboss/usr/bin/eprimer3 ln -sf ../lib/emboss/eprimer3 debian/emboss/usr/bin/eprimer3 rm -f debian/emboss/usr/bin/matcher ln -sf ../lib/emboss/matcher debian/emboss/usr/bin/matcher rm -f debian/emboss/usr/bin/fuzztran ln -sf ../lib/emboss/fuzztran debian/emboss/usr/bin/fuzztran rm -f debian/emboss/usr/bin/cirdna ln -sf ../lib/emboss/cirdna debian/emboss/usr/bin/cirdna rm -f debian/emboss/usr/bin/coderet ln -sf ../lib/emboss/coderet debian/emboss/usr/bin/coderet rm -f debian/emboss/usr/bin/merger ln -sf ../lib/emboss/merger debian/emboss/usr/bin/merger rm -f debian/emboss/usr/bin/acdpretty ln -sf ../lib/emboss/acdpretty debian/emboss/usr/bin/acdpretty rm -f debian/emboss/usr/bin/splitsource ln -sf ../lib/emboss/splitsource debian/emboss/usr/bin/splitsource rm -f debian/emboss/usr/bin/edamdef ln -sf ../lib/emboss/edamdef debian/emboss/usr/bin/edamdef rm -f debian/emboss/usr/bin/cachedbfetch ln -sf ../lib/emboss/cachedbfetch debian/emboss/usr/bin/cachedbfetch rm -f debian/emboss/usr/bin/acdtable ln -sf ../lib/emboss/acdtable debian/emboss/usr/bin/acdtable rm -f debian/emboss/usr/bin/textget ln -sf ../lib/emboss/textget debian/emboss/usr/bin/textget rm -f debian/emboss/usr/bin/mwfilter ln -sf ../lib/emboss/mwfilter debian/emboss/usr/bin/mwfilter rm -f debian/emboss/usr/bin/pepdigest ln -sf ../lib/emboss/pepdigest debian/emboss/usr/bin/pepdigest rm -f debian/emboss/usr/bin/featcopy ln -sf ../lib/emboss/featcopy debian/emboss/usr/bin/featcopy rm -f debian/emboss/usr/bin/taxgetdown ln -sf ../lib/emboss/taxgetdown debian/emboss/usr/bin/taxgetdown rm -f debian/emboss/usr/bin/seqretsetall ln -sf ../lib/emboss/seqretsetall debian/emboss/usr/bin/seqretsetall rm -f debian/emboss/usr/bin/charge ln -sf ../lib/emboss/charge debian/emboss/usr/bin/charge rm -f debian/emboss/usr/bin/featreport ln -sf ../lib/emboss/featreport debian/emboss/usr/bin/featreport rm -f debian/emboss/usr/bin/seqretsplit ln -sf ../lib/emboss/seqretsplit debian/emboss/usr/bin/seqretsplit rm -f debian/emboss/usr/bin/pepcoil ln -sf ../lib/emboss/pepcoil debian/emboss/usr/bin/pepcoil rm -f debian/emboss/usr/bin/emowse ln -sf ../lib/emboss/emowse debian/emboss/usr/bin/emowse rm -f debian/emboss/usr/bin/trimest ln -sf ../lib/emboss/trimest debian/emboss/usr/bin/trimest rm -f debian/emboss/usr/bin/tfm ln -sf ../lib/emboss/tfm debian/emboss/usr/bin/tfm rm -f debian/emboss/usr/bin/plotcon ln -sf ../lib/emboss/plotcon debian/emboss/usr/bin/plotcon rm -f debian/emboss/usr/bin/newcpgreport ln -sf ../lib/emboss/newcpgreport debian/emboss/usr/bin/newcpgreport rm -f debian/emboss/usr/bin/acdlog ln -sf ../lib/emboss/acdlog debian/emboss/usr/bin/acdlog rm -f debian/emboss/usr/bin/abiview ln -sf ../lib/emboss/abiview debian/emboss/usr/bin/abiview rm -f debian/emboss/usr/bin/needleall ln -sf ../lib/emboss/needleall debian/emboss/usr/bin/needleall rm -f debian/emboss/usr/bin/cpgplot ln -sf ../lib/emboss/cpgplot debian/emboss/usr/bin/cpgplot rm -f debian/emboss/usr/bin/drfindresource ln -sf ../lib/emboss/drfindresource debian/emboss/usr/bin/drfindresource rm -f debian/emboss/usr/bin/extractseq ln -sf ../lib/emboss/extractseq debian/emboss/usr/bin/extractseq rm -f debian/emboss/usr/bin/eprimer32 ln -sf ../lib/emboss/eprimer32 debian/emboss/usr/bin/eprimer32 rm -f debian/emboss/usr/bin/plotorf ln -sf ../lib/emboss/plotorf debian/emboss/usr/bin/plotorf rm -f debian/emboss/usr/bin/backtranambig ln -sf ../lib/emboss/backtranambig debian/emboss/usr/bin/backtranambig rm -f debian/emboss/usr/bin/em_cons ln -sf ../lib/emboss/cons debian/emboss/usr/bin/em_cons rm -f debian/emboss/usr/bin/nospace ln -sf ../lib/emboss/nospace debian/emboss/usr/bin/nospace rm -f debian/emboss/usr/bin/pepwheel ln -sf ../lib/emboss/pepwheel debian/emboss/usr/bin/pepwheel rm -f debian/emboss/usr/bin/noreturn ln -sf ../lib/emboss/noreturn debian/emboss/usr/bin/noreturn rm -f debian/emboss/usr/bin/infobase ln -sf ../lib/emboss/infobase debian/emboss/usr/bin/infobase rm -f debian/emboss/usr/bin/mwcontam ln -sf ../lib/emboss/mwcontam debian/emboss/usr/bin/mwcontam rm -f debian/emboss/usr/bin/assemblyget ln -sf ../lib/emboss/assemblyget debian/emboss/usr/bin/assemblyget rm -f debian/emboss/usr/bin/distmat ln -sf ../lib/emboss/distmat debian/emboss/usr/bin/distmat rm -f debian/emboss/usr/bin/skipredundant ln -sf ../lib/emboss/skipredundant debian/emboss/usr/bin/skipredundant rm -f debian/emboss/usr/bin/embossversion ln -sf ../lib/emboss/embossversion debian/emboss/usr/bin/embossversion rm -f debian/emboss/usr/bin/pepstats ln -sf ../lib/emboss/pepstats debian/emboss/usr/bin/pepstats rm -f debian/emboss/usr/bin/cacheebeyesearch ln -sf ../lib/emboss/cacheebeyesearch debian/emboss/usr/bin/cacheebeyesearch rm -f debian/emboss/usr/bin/dbxflat ln -sf ../lib/emboss/dbxflat debian/emboss/usr/bin/dbxflat rm -f debian/emboss/usr/bin/dbxresource ln -sf ../lib/emboss/dbxresource debian/emboss/usr/bin/dbxresource rm -f debian/emboss/usr/bin/cusp ln -sf ../lib/emboss/cusp debian/emboss/usr/bin/cusp rm -f debian/emboss/usr/bin/wossoutput ln -sf ../lib/emboss/wossoutput debian/emboss/usr/bin/wossoutput rm -f debian/emboss/usr/bin/nohtml ln -sf ../lib/emboss/nohtml debian/emboss/usr/bin/nohtml rm -f debian/emboss/usr/bin/servertell ln -sf ../lib/emboss/servertell debian/emboss/usr/bin/servertell rm -f debian/emboss/usr/bin/sixpack ln -sf ../lib/emboss/sixpack debian/emboss/usr/bin/sixpack rm -f debian/emboss/usr/bin/nthseq ln -sf ../lib/emboss/nthseq debian/emboss/usr/bin/nthseq rm -f debian/emboss/usr/bin/getorf ln -sf ../lib/emboss/getorf debian/emboss/usr/bin/getorf rm -f debian/emboss/usr/bin/showorf ln -sf ../lib/emboss/showorf debian/emboss/usr/bin/showorf rm -f debian/emboss/usr/bin/dbxstat ln -sf ../lib/emboss/dbxstat debian/emboss/usr/bin/dbxstat rm -f debian/emboss/usr/bin/geecee ln -sf ../lib/emboss/geecee debian/emboss/usr/bin/geecee rm -f debian/emboss/usr/bin/ontogetsibs ln -sf ../lib/emboss/ontogetsibs debian/emboss/usr/bin/ontogetsibs rm -f debian/emboss/usr/bin/wosstopic ln -sf ../lib/emboss/wosstopic debian/emboss/usr/bin/wosstopic rm -f debian/emboss/usr/bin/jembossctl ln -sf ../lib/emboss/jembossctl debian/emboss/usr/bin/jembossctl rm -f debian/emboss/usr/bin/transeq ln -sf ../lib/emboss/transeq debian/emboss/usr/bin/transeq rm -f debian/emboss/usr/bin/wordcount ln -sf ../lib/emboss/wordcount debian/emboss/usr/bin/wordcount rm -f debian/emboss/usr/bin/ontocount ln -sf ../lib/emboss/ontocount debian/emboss/usr/bin/ontocount rm -f debian/emboss/usr/bin/ontogetcommon ln -sf ../lib/emboss/ontogetcommon debian/emboss/usr/bin/ontogetcommon rm -f debian/emboss/usr/bin/pepnet ln -sf ../lib/emboss/pepnet debian/emboss/usr/bin/pepnet rm -f debian/emboss/usr/bin/findkm ln -sf ../lib/emboss/findkm debian/emboss/usr/bin/findkm rm -f debian/emboss/usr/bin/fuzznuc ln -sf ../lib/emboss/fuzznuc debian/emboss/usr/bin/fuzznuc rm -f debian/emboss/usr/bin/codcopy ln -sf ../lib/emboss/codcopy debian/emboss/usr/bin/codcopy rm -f debian/emboss/usr/bin/taxget ln -sf ../lib/emboss/taxget debian/emboss/usr/bin/taxget rm -f debian/emboss/usr/bin/wobble ln -sf ../lib/emboss/wobble debian/emboss/usr/bin/wobble rm -f debian/emboss/usr/bin/prettyplot ln -sf ../lib/emboss/prettyplot debian/emboss/usr/bin/prettyplot rm -f debian/emboss/usr/bin/notseq ln -sf ../lib/emboss/notseq debian/emboss/usr/bin/notseq rm -f debian/emboss/usr/bin/seqcount ln -sf ../lib/emboss/seqcount debian/emboss/usr/bin/seqcount rm -f debian/emboss/usr/bin/tfscan ln -sf ../lib/emboss/tfscan debian/emboss/usr/bin/tfscan rm -f debian/emboss/usr/bin/syco ln -sf ../lib/emboss/syco debian/emboss/usr/bin/syco rm -f debian/emboss/usr/bin/water ln -sf ../lib/emboss/water debian/emboss/usr/bin/water rm -f debian/emboss/usr/bin/makenucseq ln -sf ../lib/emboss/makenucseq debian/emboss/usr/bin/makenucseq rm -f debian/emboss/usr/bin/dreg ln -sf ../lib/emboss/dreg debian/emboss/usr/bin/dreg rm -f debian/emboss/usr/bin/trimseq ln -sf ../lib/emboss/trimseq debian/emboss/usr/bin/trimseq rm -f debian/emboss/usr/bin/equicktandem ln -sf ../lib/emboss/equicktandem debian/emboss/usr/bin/equicktandem rm -f debian/emboss/usr/bin/antigenic ln -sf ../lib/emboss/antigenic debian/emboss/usr/bin/antigenic rm -f debian/emboss/usr/bin/prettyseq ln -sf ../lib/emboss/prettyseq debian/emboss/usr/bin/prettyseq rm -f debian/emboss/usr/bin/dbxfasta ln -sf ../lib/emboss/dbxfasta debian/emboss/usr/bin/dbxfasta rm -f debian/emboss/usr/bin/dottup ln -sf ../lib/emboss/dottup debian/emboss/usr/bin/dottup rm -f debian/emboss/usr/bin/whichdb ln -sf ../lib/emboss/whichdb debian/emboss/usr/bin/whichdb rm -f debian/emboss/usr/bin/dbxedam ln -sf ../lib/emboss/dbxedam debian/emboss/usr/bin/dbxedam rm -f debian/emboss/usr/bin/lindna ln -sf ../lib/emboss/lindna debian/emboss/usr/bin/lindna rm -f debian/emboss/usr/bin/maskseq ln -sf ../lib/emboss/maskseq debian/emboss/usr/bin/maskseq rm -f debian/emboss/usr/bin/etandem ln -sf ../lib/emboss/etandem debian/emboss/usr/bin/etandem rm -f debian/emboss/usr/bin/recoder ln -sf ../lib/emboss/recoder debian/emboss/usr/bin/recoder rm -f debian/emboss/usr/bin/isochore ln -sf ../lib/emboss/isochore debian/emboss/usr/bin/isochore rm -f debian/emboss/usr/bin/em_pscan ln -sf ../lib/emboss/pscan debian/emboss/usr/bin/em_pscan rm -f debian/emboss/usr/bin/tcode ln -sf ../lib/emboss/tcode debian/emboss/usr/bin/tcode rm -f debian/emboss/usr/bin/silent ln -sf ../lib/emboss/silent debian/emboss/usr/bin/silent rm -f debian/emboss/usr/bin/twofeat ln -sf ../lib/emboss/twofeat debian/emboss/usr/bin/twofeat rm -f debian/emboss/usr/bin/pasteseq ln -sf ../lib/emboss/pasteseq debian/emboss/usr/bin/pasteseq rm -f debian/emboss/usr/bin/edialign ln -sf ../lib/emboss/edialign debian/emboss/usr/bin/edialign rm -f debian/emboss/usr/bin/dbiblast ln -sf ../lib/emboss/dbiblast debian/emboss/usr/bin/dbiblast rm -f debian/emboss/usr/bin/yank ln -sf ../lib/emboss/yank debian/emboss/usr/bin/yank rm -f debian/emboss/usr/bin/prosextract ln -sf ../lib/emboss/prosextract debian/emboss/usr/bin/prosextract rm -f debian/emboss/usr/bin/restrict ln -sf ../lib/emboss/restrict debian/emboss/usr/bin/restrict rm -f debian/emboss/usr/bin/showseq ln -sf ../lib/emboss/showseq debian/emboss/usr/bin/showseq rm -f debian/emboss/usr/bin/ontogetobsolete ln -sf ../lib/emboss/ontogetobsolete debian/emboss/usr/bin/ontogetobsolete rm -f debian/emboss/usr/bin/preg ln -sf ../lib/emboss/preg debian/emboss/usr/bin/preg rm -f debian/emboss/usr/bin/wordmatch ln -sf ../lib/emboss/wordmatch debian/emboss/usr/bin/wordmatch rm -f debian/emboss/usr/bin/ontoisobsolete ln -sf ../lib/emboss/ontoisobsolete debian/emboss/usr/bin/ontoisobsolete rm -f debian/emboss/usr/bin/polydot ln -sf ../lib/emboss/polydot debian/emboss/usr/bin/polydot rm -f debian/emboss/usr/bin/jaspextract ln -sf ../lib/emboss/jaspextract debian/emboss/usr/bin/jaspextract rm -f debian/emboss/usr/bin/diffseq ln -sf ../lib/emboss/diffseq debian/emboss/usr/bin/diffseq rm -f debian/emboss/usr/bin/shuffleseq ln -sf ../lib/emboss/shuffleseq debian/emboss/usr/bin/shuffleseq rm -f debian/emboss/usr/bin/octanol ln -sf ../lib/emboss/octanol debian/emboss/usr/bin/octanol rm -f debian/emboss/usr/bin/hmoment ln -sf ../lib/emboss/hmoment debian/emboss/usr/bin/hmoment rm -f debian/emboss/usr/bin/embossdata ln -sf ../lib/emboss/embossdata debian/emboss/usr/bin/embossdata rm -f debian/emboss/usr/bin/maskambignuc ln -sf ../lib/emboss/maskambignuc debian/emboss/usr/bin/maskambignuc rm -f debian/emboss/usr/bin/refseqget ln -sf ../lib/emboss/refseqget debian/emboss/usr/bin/refseqget rm -f debian/emboss/usr/bin/dbiflat ln -sf ../lib/emboss/dbiflat debian/emboss/usr/bin/dbiflat rm -f debian/emboss/usr/bin/listor ln -sf ../lib/emboss/listor debian/emboss/usr/bin/listor rm -f debian/emboss/usr/bin/showserver ln -sf ../lib/emboss/showserver debian/emboss/usr/bin/showserver rm -f debian/emboss/usr/bin/skipseq ln -sf ../lib/emboss/skipseq debian/emboss/usr/bin/skipseq rm -f debian/emboss/usr/bin/prophet ln -sf ../lib/emboss/prophet debian/emboss/usr/bin/prophet rm -f debian/emboss/usr/bin/goname ln -sf ../lib/emboss/goname debian/emboss/usr/bin/goname rm -f debian/emboss/usr/bin/chips ln -sf ../lib/emboss/chips debian/emboss/usr/bin/chips rm -f debian/emboss/usr/bin/edamisformat ln -sf ../lib/emboss/edamisformat debian/emboss/usr/bin/edamisformat rm -f debian/emboss/usr/bin/density ln -sf ../lib/emboss/density debian/emboss/usr/bin/density rm -f debian/emboss/usr/bin/consambig ln -sf ../lib/emboss/consambig debian/emboss/usr/bin/consambig rm -f debian/emboss/usr/bin/ontogetup ln -sf ../lib/emboss/ontogetup debian/emboss/usr/bin/ontogetup rm -f debian/emboss/usr/bin/infoalign ln -sf ../lib/emboss/infoalign debian/emboss/usr/bin/infoalign rm -f debian/emboss/usr/bin/needle ln -sf ../lib/emboss/needle debian/emboss/usr/bin/needle rm -f debian/emboss/usr/bin/acdtrace ln -sf ../lib/emboss/acdtrace debian/emboss/usr/bin/acdtrace rm -f debian/emboss/usr/bin/vectorstrip ln -sf ../lib/emboss/vectorstrip debian/emboss/usr/bin/vectorstrip rm -f debian/emboss/usr/bin/megamerger ln -sf ../lib/emboss/megamerger debian/emboss/usr/bin/megamerger rm -f debian/emboss/usr/bin/prophecy ln -sf ../lib/emboss/prophecy debian/emboss/usr/bin/prophecy rm -f debian/emboss/usr/bin/dbxcompress ln -sf ../lib/emboss/dbxcompress debian/emboss/usr/bin/dbxcompress rm -f debian/emboss/usr/bin/codcmp ln -sf ../lib/emboss/codcmp debian/emboss/usr/bin/codcmp rm -f debian/emboss/usr/bin/textsearch ln -sf ../lib/emboss/textsearch debian/emboss/usr/bin/textsearch rm -f debian/emboss/usr/bin/ontotext ln -sf ../lib/emboss/ontotext debian/emboss/usr/bin/ontotext rm -f debian/emboss/usr/bin/printsextract ln -sf ../lib/emboss/printsextract debian/emboss/usr/bin/printsextract rm -f debian/emboss/usr/bin/variationget ln -sf ../lib/emboss/variationget debian/emboss/usr/bin/variationget rm -f debian/emboss/usr/bin/union ln -sf ../lib/emboss/union debian/emboss/usr/bin/union rm -f debian/emboss/usr/bin/showfeat ln -sf ../lib/emboss/showfeat debian/emboss/usr/bin/showfeat rm -f debian/emboss/usr/bin/freak ln -sf ../lib/emboss/freak debian/emboss/usr/bin/freak rm -f debian/emboss/usr/bin/dbigcg ln -sf ../lib/emboss/dbigcg debian/emboss/usr/bin/dbigcg rm -f debian/emboss/usr/bin/degapseq ln -sf ../lib/emboss/degapseq debian/emboss/usr/bin/degapseq rm -f debian/emboss/usr/bin/ontogetroot ln -sf ../lib/emboss/ontogetroot debian/emboss/usr/bin/ontogetroot rm -f debian/emboss/usr/bin/wossinput ln -sf ../lib/emboss/wossinput debian/emboss/usr/bin/wossinput rm -f debian/emboss/usr/bin/revseq ln -sf ../lib/emboss/revseq debian/emboss/usr/bin/revseq rm -f debian/emboss/usr/bin/sigcleave ln -sf ../lib/emboss/sigcleave debian/emboss/usr/bin/sigcleave rm -f debian/emboss/usr/bin/cai ln -sf ../lib/emboss/cai debian/emboss/usr/bin/cai rm -f debian/emboss/usr/bin/embossupdate ln -sf ../lib/emboss/embossupdate debian/emboss/usr/bin/embossupdate rm -f debian/emboss/usr/bin/stretcher ln -sf ../lib/emboss/stretcher debian/emboss/usr/bin/stretcher rm -f debian/emboss/usr/bin/biosed ln -sf ../lib/emboss/biosed debian/emboss/usr/bin/biosed rm -f debian/emboss/usr/bin/wossoperation ln -sf ../lib/emboss/wossoperation debian/emboss/usr/bin/wossoperation rm -f debian/emboss/usr/bin/pepwindow ln -sf ../lib/emboss/pepwindow debian/emboss/usr/bin/pepwindow rm -f debian/emboss/usr/bin/dbxtax ln -sf ../lib/emboss/dbxtax debian/emboss/usr/bin/dbxtax rm -f debian/emboss/usr/bin/seqmatchall ln -sf ../lib/emboss/seqmatchall debian/emboss/usr/bin/seqmatchall rm -f debian/emboss/usr/bin/primersearch ln -sf ../lib/emboss/primersearch debian/emboss/usr/bin/primersearch rm -f debian/emboss/usr/bin/urlget ln -sf ../lib/emboss/urlget debian/emboss/usr/bin/urlget rm -f debian/emboss/usr/bin/emma ln -sf ../lib/emboss/emma debian/emboss/usr/bin/emma rm -f debian/emboss/usr/bin/checktrans ln -sf ../lib/emboss/checktrans debian/emboss/usr/bin/checktrans rm -f debian/emboss/usr/bin/dbxreport ln -sf ../lib/emboss/dbxreport debian/emboss/usr/bin/dbxreport rm -f debian/emboss/usr/bin/drtext ln -sf ../lib/emboss/drtext debian/emboss/usr/bin/drtext rm -f debian/emboss/usr/bin/wossparam ln -sf ../lib/emboss/wossparam debian/emboss/usr/bin/wossparam rm -f debian/emboss/usr/share/man/man1/em_cons.1e.gz ln -sf cons.1e.gz debian/emboss/usr/share/man/man1/em_cons.1e.gz rm -f debian/emboss-lib/usr/share/doc/emboss-lib/ChangeLog ln -sf changelog debian/emboss-lib/usr/share/doc/emboss-lib/ChangeLog rm -f debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so.6 ln -sf libnucleus.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so ln -sf libajaxg.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so.6 ln -sf libajaxdb.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libajax.so ln -sf libajax.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajax.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libacd.so.6 ln -sf libacd.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libacd.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libensembl.so.6 ln -sf libensembl.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libensembl.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libajax.so.6 ln -sf libajax.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajax.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so ln -sf libnucleus.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so ln -sf libeplplot.so.3.2.7 debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libepcre.so.7 ln -sf libepcre.so.7.0.9 debian/emboss-lib/usr/lib/emboss/lib/libepcre.so.7 rm -f debian/emboss-lib/usr/lib/emboss/lib/libacd.so ln -sf libacd.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libacd.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so ln -sf libajaxdb.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libepcre.so ln -sf libepcre.so.7.0.9 debian/emboss-lib/usr/lib/emboss/lib/libepcre.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so.6 ln -sf libajaxg.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libensembl.so ln -sf libensembl.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libensembl.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so.3 ln -sf libeplplot.so.3.2.7 debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so.3 rm -f debian/emboss/usr/share/doc/emboss/ChangeLog ln -sf changelog debian/emboss/usr/share/doc/emboss/ChangeLog rm -f debian/emboss/usr/share/man/man1/em_cons.1e.gz ln -sf cons.1e.gz debian/emboss/usr/share/man/man1/em_cons.1e.gz rm -f debian/emboss/usr/bin/wossdata ln -sf ../lib/emboss/wossdata debian/emboss/usr/bin/wossdata rm -f debian/emboss/usr/bin/makeprotseq ln -sf ../lib/emboss/makeprotseq debian/emboss/usr/bin/makeprotseq rm -f debian/emboss/usr/bin/acdc ln -sf ../lib/emboss/acdc debian/emboss/usr/bin/acdc rm -f debian/emboss/usr/bin/backtranseq ln -sf ../lib/emboss/backtranseq debian/emboss/usr/bin/backtranseq rm -f debian/emboss/usr/bin/restover ln -sf ../lib/emboss/restover debian/emboss/usr/bin/restover rm -f debian/emboss/usr/bin/cacheensembl ln -sf ../lib/emboss/cacheensembl debian/emboss/usr/bin/cacheensembl rm -f debian/emboss/usr/bin/cutseq ln -sf ../lib/emboss/cutseq debian/emboss/usr/bin/cutseq rm -f debian/emboss/usr/bin/drfindformat ln -sf ../lib/emboss/drfindformat debian/emboss/usr/bin/drfindformat rm -f debian/emboss/usr/bin/marscan ln -sf ../lib/emboss/marscan debian/emboss/usr/bin/marscan rm -f debian/emboss/usr/bin/trimspace ln -sf ../lib/emboss/trimspace debian/emboss/usr/bin/trimspace rm -f debian/emboss/usr/bin/edamisid ln -sf ../lib/emboss/edamisid debian/emboss/usr/bin/edamisid rm -f debian/emboss/usr/bin/sizeseq ln -sf ../lib/emboss/sizeseq debian/emboss/usr/bin/sizeseq rm -f debian/emboss/usr/bin/oddcomp ln -sf ../lib/emboss/oddcomp debian/emboss/usr/bin/oddcomp rm -f debian/emboss/usr/bin/dbifasta ln -sf ../lib/emboss/dbifasta debian/emboss/usr/bin/dbifasta rm -f debian/emboss/usr/bin/edamhasinput ln -sf ../lib/emboss/edamhasinput debian/emboss/usr/bin/edamhasinput rm -f debian/emboss/usr/bin/taxgetspecies ln -sf ../lib/emboss/taxgetspecies debian/emboss/usr/bin/taxgetspecies rm -f debian/emboss/usr/bin/jaspscan ln -sf ../lib/emboss/jaspscan debian/emboss/usr/bin/jaspscan rm -f debian/emboss/usr/bin/einverted ln -sf ../lib/emboss/einverted debian/emboss/usr/bin/einverted rm -f debian/emboss/usr/bin/est2genome ln -sf ../lib/emboss/est2genome debian/emboss/usr/bin/est2genome rm -f debian/emboss/usr/bin/msbar ln -sf ../lib/emboss/msbar debian/emboss/usr/bin/msbar rm -f debian/emboss/usr/bin/tranalign ln -sf ../lib/emboss/tranalign debian/emboss/usr/bin/tranalign rm -f debian/emboss/usr/bin/btwisted ln -sf ../lib/emboss/btwisted debian/emboss/usr/bin/btwisted rm -f debian/emboss/usr/bin/cutgextract ln -sf ../lib/emboss/cutgextract debian/emboss/usr/bin/cutgextract rm -f debian/emboss/usr/bin/maskfeat ln -sf ../lib/emboss/maskfeat debian/emboss/usr/bin/maskfeat rm -f debian/emboss/usr/bin/dotpath ln -sf ../lib/emboss/dotpath debian/emboss/usr/bin/dotpath rm -f debian/emboss/usr/bin/dotmatcher ln -sf ../lib/emboss/dotmatcher debian/emboss/usr/bin/dotmatcher rm -f debian/emboss/usr/bin/seqxref ln -sf ../lib/emboss/seqxref debian/emboss/usr/bin/seqxref rm -f debian/emboss/usr/bin/featmerge ln -sf ../lib/emboss/featmerge debian/emboss/usr/bin/featmerge rm -f debian/emboss/usr/bin/edamhasoutput ln -sf ../lib/emboss/edamhasoutput debian/emboss/usr/bin/edamhasoutput rm -f debian/emboss/usr/bin/taxgetrank ln -sf ../lib/emboss/taxgetrank debian/emboss/usr/bin/taxgetrank rm -f debian/emboss/usr/bin/dbxuncompress ln -sf ../lib/emboss/dbxuncompress debian/emboss/usr/bin/dbxuncompress rm -f debian/emboss/usr/bin/tmap ln -sf ../lib/emboss/tmap debian/emboss/usr/bin/tmap rm -f debian/emboss/usr/bin/aaindexextract ln -sf ../lib/emboss/aaindexextract debian/emboss/usr/bin/aaindexextract rm -f debian/emboss/usr/bin/tfextract ln -sf ../lib/emboss/tfextract debian/emboss/usr/bin/tfextract rm -f debian/emboss/usr/bin/drget ln -sf ../lib/emboss/drget debian/emboss/usr/bin/drget rm -f debian/emboss/usr/bin/drfindid ln -sf ../lib/emboss/drfindid debian/emboss/usr/bin/drfindid rm -f debian/emboss/usr/bin/taxgetup ln -sf ../lib/emboss/taxgetup debian/emboss/usr/bin/taxgetup rm -f debian/emboss/usr/bin/helixturnhelix ln -sf ../lib/emboss/helixturnhelix debian/emboss/usr/bin/helixturnhelix rm -f debian/emboss/usr/bin/redata ln -sf ../lib/emboss/redata debian/emboss/usr/bin/redata rm -f debian/emboss/usr/bin/newseq ln -sf ../lib/emboss/newseq debian/emboss/usr/bin/newseq rm -f debian/emboss/usr/bin/xmltext ln -sf ../lib/emboss/xmltext debian/emboss/usr/bin/xmltext rm -f debian/emboss/usr/bin/psiphi ln -sf ../lib/emboss/psiphi debian/emboss/usr/bin/psiphi rm -f debian/emboss/usr/bin/drfinddata ln -sf ../lib/emboss/drfinddata debian/emboss/usr/bin/drfinddata rm -f debian/emboss/usr/bin/newcpgseek ln -sf ../lib/emboss/newcpgseek debian/emboss/usr/bin/newcpgseek rm -f debian/emboss/usr/bin/seqxrefget ln -sf ../lib/emboss/seqxrefget debian/emboss/usr/bin/seqxrefget rm -f debian/emboss/usr/bin/maskambigprot ln -sf ../lib/emboss/maskambigprot debian/emboss/usr/bin/maskambigprot rm -f debian/emboss/usr/bin/showalign ln -sf ../lib/emboss/showalign debian/emboss/usr/bin/showalign rm -f debian/emboss/usr/bin/cpgreport ln -sf ../lib/emboss/cpgreport debian/emboss/usr/bin/cpgreport rm -f debian/emboss/usr/bin/compseq ln -sf ../lib/emboss/compseq debian/emboss/usr/bin/compseq rm -f debian/emboss/usr/bin/wossname ln -sf ../lib/emboss/wossname debian/emboss/usr/bin/wossname rm -f debian/emboss/usr/bin/sirna ln -sf ../lib/emboss/sirna debian/emboss/usr/bin/sirna rm -f debian/emboss/usr/bin/showdb ln -sf ../lib/emboss/showdb debian/emboss/usr/bin/showdb rm -f debian/emboss/usr/bin/seqret ln -sf ../lib/emboss/seqret debian/emboss/usr/bin/seqret rm -f debian/emboss/usr/bin/xmlget ln -sf ../lib/emboss/xmlget debian/emboss/usr/bin/xmlget rm -f debian/emboss/usr/bin/patmatmotifs ln -sf ../lib/emboss/patmatmotifs debian/emboss/usr/bin/patmatmotifs rm -f debian/emboss/usr/bin/inforesidue ln -sf ../lib/emboss/inforesidue debian/emboss/usr/bin/inforesidue rm -f debian/emboss/usr/bin/entret ln -sf ../lib/emboss/entret debian/emboss/usr/bin/entret rm -f debian/emboss/usr/bin/chaos ln -sf ../lib/emboss/chaos debian/emboss/usr/bin/chaos rm -f debian/emboss/usr/bin/aligncopy ln -sf ../lib/emboss/aligncopy debian/emboss/usr/bin/aligncopy rm -f debian/emboss/usr/bin/infoseq ln -sf ../lib/emboss/infoseq debian/emboss/usr/bin/infoseq rm -f debian/emboss/usr/bin/seealso ln -sf ../lib/emboss/seealso debian/emboss/usr/bin/seealso rm -f debian/emboss/usr/bin/ontogetdown ln -sf ../lib/emboss/ontogetdown debian/emboss/usr/bin/ontogetdown rm -f debian/emboss/usr/bin/epestfind ln -sf ../lib/emboss/epestfind debian/emboss/usr/bin/epestfind rm -f debian/emboss/usr/bin/iep ln -sf ../lib/emboss/iep debian/emboss/usr/bin/iep rm -f debian/emboss/usr/bin/infoassembly ln -sf ../lib/emboss/infoassembly debian/emboss/usr/bin/infoassembly rm -f debian/emboss/usr/bin/cachedas ln -sf ../lib/emboss/cachedas debian/emboss/usr/bin/cachedas rm -f debian/emboss/usr/bin/supermatcher ln -sf ../lib/emboss/supermatcher debian/emboss/usr/bin/supermatcher rm -f debian/emboss/usr/bin/fuzzpro ln -sf ../lib/emboss/fuzzpro debian/emboss/usr/bin/fuzzpro rm -f debian/emboss/usr/bin/stssearch ln -sf ../lib/emboss/stssearch debian/emboss/usr/bin/stssearch rm -f debian/emboss/usr/bin/edamname ln -sf ../lib/emboss/edamname debian/emboss/usr/bin/edamname rm -f debian/emboss/usr/bin/pepinfo ln -sf ../lib/emboss/pepinfo debian/emboss/usr/bin/pepinfo rm -f debian/emboss/usr/bin/remap ln -sf ../lib/emboss/remap debian/emboss/usr/bin/remap rm -f debian/emboss/usr/bin/acdvalid ln -sf ../lib/emboss/acdvalid debian/emboss/usr/bin/acdvalid rm -f debian/emboss/usr/bin/splitter ln -sf ../lib/emboss/splitter debian/emboss/usr/bin/splitter rm -f debian/emboss/usr/bin/banana ln -sf ../lib/emboss/banana debian/emboss/usr/bin/banana rm -f debian/emboss/usr/bin/extractfeat ln -sf ../lib/emboss/extractfeat debian/emboss/usr/bin/extractfeat rm -f debian/emboss/usr/bin/dan ln -sf ../lib/emboss/dan debian/emboss/usr/bin/dan rm -f debian/emboss/usr/bin/acdgalaxy ln -sf ../lib/emboss/acdgalaxy debian/emboss/usr/bin/acdgalaxy rm -f debian/emboss/usr/bin/garnier ln -sf ../lib/emboss/garnier debian/emboss/usr/bin/garnier rm -f debian/emboss/usr/bin/wordfinder ln -sf ../lib/emboss/wordfinder debian/emboss/usr/bin/wordfinder rm -f debian/emboss/usr/bin/ontoget ln -sf ../lib/emboss/ontoget debian/emboss/usr/bin/ontoget rm -f debian/emboss/usr/bin/dbxobo ln -sf ../lib/emboss/dbxobo debian/emboss/usr/bin/dbxobo rm -f debian/emboss/usr/bin/dbxgcg ln -sf ../lib/emboss/dbxgcg debian/emboss/usr/bin/dbxgcg rm -f debian/emboss/usr/bin/godef ln -sf ../lib/emboss/godef debian/emboss/usr/bin/godef rm -f debian/emboss/usr/bin/feattext ln -sf ../lib/emboss/feattext debian/emboss/usr/bin/feattext rm -f debian/emboss/usr/bin/aligncopypair ln -sf ../lib/emboss/aligncopypair debian/emboss/usr/bin/aligncopypair rm -f debian/emboss/usr/bin/dbtell ln -sf ../lib/emboss/dbtell debian/emboss/usr/bin/dbtell rm -f debian/emboss/usr/bin/nthseqset ln -sf ../lib/emboss/nthseqset debian/emboss/usr/bin/nthseqset rm -f debian/emboss/usr/bin/rebaseextract ln -sf ../lib/emboss/rebaseextract debian/emboss/usr/bin/rebaseextract rm -f debian/emboss/usr/bin/patmatdb ln -sf ../lib/emboss/patmatdb debian/emboss/usr/bin/patmatdb rm -f debian/emboss/usr/bin/palindrome ln -sf ../lib/emboss/palindrome debian/emboss/usr/bin/palindrome rm -f debian/emboss/usr/bin/descseq ln -sf ../lib/emboss/descseq debian/emboss/usr/bin/descseq rm -f debian/emboss/usr/bin/profit ln -sf ../lib/emboss/profit debian/emboss/usr/bin/profit rm -f debian/emboss/usr/bin/pepwindowall ln -sf ../lib/emboss/pepwindowall debian/emboss/usr/bin/pepwindowall rm -f debian/emboss/usr/bin/extractalign ln -sf ../lib/emboss/extractalign debian/emboss/usr/bin/extractalign rm -f debian/emboss/usr/bin/showpep ln -sf ../lib/emboss/showpep debian/emboss/usr/bin/showpep rm -f debian/emboss/usr/bin/notab ln -sf ../lib/emboss/notab debian/emboss/usr/bin/notab rm -f debian/emboss/usr/bin/eprimer3 ln -sf ../lib/emboss/eprimer3 debian/emboss/usr/bin/eprimer3 rm -f debian/emboss/usr/bin/matcher ln -sf ../lib/emboss/matcher debian/emboss/usr/bin/matcher rm -f debian/emboss/usr/bin/fuzztran ln -sf ../lib/emboss/fuzztran debian/emboss/usr/bin/fuzztran rm -f debian/emboss/usr/bin/cirdna ln -sf ../lib/emboss/cirdna debian/emboss/usr/bin/cirdna rm -f debian/emboss/usr/bin/coderet ln -sf ../lib/emboss/coderet debian/emboss/usr/bin/coderet rm -f debian/emboss/usr/bin/merger ln -sf ../lib/emboss/merger debian/emboss/usr/bin/merger rm -f debian/emboss/usr/bin/acdpretty ln -sf ../lib/emboss/acdpretty debian/emboss/usr/bin/acdpretty rm -f debian/emboss/usr/bin/splitsource ln -sf ../lib/emboss/splitsource debian/emboss/usr/bin/splitsource rm -f debian/emboss/usr/bin/edamdef ln -sf ../lib/emboss/edamdef debian/emboss/usr/bin/edamdef rm -f debian/emboss/usr/bin/cachedbfetch ln -sf ../lib/emboss/cachedbfetch debian/emboss/usr/bin/cachedbfetch rm -f debian/emboss/usr/bin/acdtable ln -sf ../lib/emboss/acdtable debian/emboss/usr/bin/acdtable rm -f debian/emboss/usr/bin/textget ln -sf ../lib/emboss/textget debian/emboss/usr/bin/textget rm -f debian/emboss/usr/bin/mwfilter ln -sf ../lib/emboss/mwfilter debian/emboss/usr/bin/mwfilter rm -f debian/emboss/usr/bin/pepdigest ln -sf ../lib/emboss/pepdigest debian/emboss/usr/bin/pepdigest rm -f debian/emboss/usr/bin/featcopy ln -sf ../lib/emboss/featcopy debian/emboss/usr/bin/featcopy rm -f debian/emboss/usr/bin/taxgetdown ln -sf ../lib/emboss/taxgetdown debian/emboss/usr/bin/taxgetdown rm -f debian/emboss/usr/bin/seqretsetall ln -sf ../lib/emboss/seqretsetall debian/emboss/usr/bin/seqretsetall rm -f debian/emboss/usr/bin/charge ln -sf ../lib/emboss/charge debian/emboss/usr/bin/charge rm -f debian/emboss/usr/bin/featreport ln -sf ../lib/emboss/featreport debian/emboss/usr/bin/featreport rm -f debian/emboss/usr/bin/seqretsplit ln -sf ../lib/emboss/seqretsplit debian/emboss/usr/bin/seqretsplit rm -f debian/emboss/usr/bin/pepcoil ln -sf ../lib/emboss/pepcoil debian/emboss/usr/bin/pepcoil rm -f debian/emboss/usr/bin/emowse ln -sf ../lib/emboss/emowse debian/emboss/usr/bin/emowse rm -f debian/emboss/usr/bin/trimest ln -sf ../lib/emboss/trimest debian/emboss/usr/bin/trimest rm -f debian/emboss/usr/bin/tfm ln -sf ../lib/emboss/tfm debian/emboss/usr/bin/tfm rm -f debian/emboss/usr/bin/plotcon ln -sf ../lib/emboss/plotcon debian/emboss/usr/bin/plotcon rm -f debian/emboss/usr/bin/newcpgreport ln -sf ../lib/emboss/newcpgreport debian/emboss/usr/bin/newcpgreport rm -f debian/emboss/usr/bin/acdlog ln -sf ../lib/emboss/acdlog debian/emboss/usr/bin/acdlog rm -f debian/emboss/usr/bin/abiview ln -sf ../lib/emboss/abiview debian/emboss/usr/bin/abiview rm -f debian/emboss/usr/bin/needleall ln -sf ../lib/emboss/needleall debian/emboss/usr/bin/needleall rm -f debian/emboss/usr/bin/cpgplot ln -sf ../lib/emboss/cpgplot debian/emboss/usr/bin/cpgplot rm -f debian/emboss/usr/bin/drfindresource ln -sf ../lib/emboss/drfindresource debian/emboss/usr/bin/drfindresource rm -f debian/emboss/usr/bin/extractseq ln -sf ../lib/emboss/extractseq debian/emboss/usr/bin/extractseq rm -f debian/emboss/usr/bin/eprimer32 ln -sf ../lib/emboss/eprimer32 debian/emboss/usr/bin/eprimer32 rm -f debian/emboss/usr/bin/plotorf ln -sf ../lib/emboss/plotorf debian/emboss/usr/bin/plotorf rm -f debian/emboss/usr/bin/backtranambig ln -sf ../lib/emboss/backtranambig debian/emboss/usr/bin/backtranambig rm -f debian/emboss/usr/bin/em_cons ln -sf ../lib/emboss/cons debian/emboss/usr/bin/em_cons rm -f debian/emboss/usr/bin/nospace ln -sf ../lib/emboss/nospace debian/emboss/usr/bin/nospace rm -f debian/emboss/usr/bin/pepwheel ln -sf ../lib/emboss/pepwheel debian/emboss/usr/bin/pepwheel rm -f debian/emboss/usr/bin/noreturn ln -sf ../lib/emboss/noreturn debian/emboss/usr/bin/noreturn rm -f debian/emboss/usr/bin/infobase ln -sf ../lib/emboss/infobase debian/emboss/usr/bin/infobase rm -f debian/emboss/usr/bin/mwcontam ln -sf ../lib/emboss/mwcontam debian/emboss/usr/bin/mwcontam rm -f debian/emboss/usr/bin/assemblyget ln -sf ../lib/emboss/assemblyget debian/emboss/usr/bin/assemblyget rm -f debian/emboss/usr/bin/distmat ln -sf ../lib/emboss/distmat debian/emboss/usr/bin/distmat rm -f debian/emboss/usr/bin/skipredundant ln -sf ../lib/emboss/skipredundant debian/emboss/usr/bin/skipredundant rm -f debian/emboss/usr/bin/embossversion ln -sf ../lib/emboss/embossversion debian/emboss/usr/bin/embossversion rm -f debian/emboss/usr/bin/pepstats ln -sf ../lib/emboss/pepstats debian/emboss/usr/bin/pepstats rm -f debian/emboss/usr/bin/cacheebeyesearch ln -sf ../lib/emboss/cacheebeyesearch debian/emboss/usr/bin/cacheebeyesearch rm -f debian/emboss/usr/bin/dbxflat ln -sf ../lib/emboss/dbxflat debian/emboss/usr/bin/dbxflat rm -f debian/emboss/usr/bin/dbxresource ln -sf ../lib/emboss/dbxresource debian/emboss/usr/bin/dbxresource rm -f debian/emboss/usr/bin/cusp ln -sf ../lib/emboss/cusp debian/emboss/usr/bin/cusp rm -f debian/emboss/usr/bin/wossoutput ln -sf ../lib/emboss/wossoutput debian/emboss/usr/bin/wossoutput rm -f debian/emboss/usr/bin/nohtml ln -sf ../lib/emboss/nohtml debian/emboss/usr/bin/nohtml rm -f debian/emboss/usr/bin/servertell ln -sf ../lib/emboss/servertell debian/emboss/usr/bin/servertell rm -f debian/emboss/usr/bin/sixpack ln -sf ../lib/emboss/sixpack debian/emboss/usr/bin/sixpack rm -f debian/emboss/usr/bin/nthseq ln -sf ../lib/emboss/nthseq debian/emboss/usr/bin/nthseq rm -f debian/emboss/usr/bin/getorf ln -sf ../lib/emboss/getorf debian/emboss/usr/bin/getorf rm -f debian/emboss/usr/bin/showorf ln -sf ../lib/emboss/showorf debian/emboss/usr/bin/showorf rm -f debian/emboss/usr/bin/dbxstat ln -sf ../lib/emboss/dbxstat debian/emboss/usr/bin/dbxstat rm -f debian/emboss/usr/bin/geecee ln -sf ../lib/emboss/geecee debian/emboss/usr/bin/geecee rm -f debian/emboss/usr/bin/ontogetsibs ln -sf ../lib/emboss/ontogetsibs debian/emboss/usr/bin/ontogetsibs rm -f debian/emboss/usr/bin/wosstopic ln -sf ../lib/emboss/wosstopic debian/emboss/usr/bin/wosstopic rm -f debian/emboss/usr/bin/jembossctl ln -sf ../lib/emboss/jembossctl debian/emboss/usr/bin/jembossctl rm -f debian/emboss/usr/bin/transeq ln -sf ../lib/emboss/transeq debian/emboss/usr/bin/transeq rm -f debian/emboss/usr/bin/wordcount ln -sf ../lib/emboss/wordcount debian/emboss/usr/bin/wordcount rm -f debian/emboss/usr/bin/ontocount ln -sf ../lib/emboss/ontocount debian/emboss/usr/bin/ontocount rm -f debian/emboss/usr/bin/ontogetcommon ln -sf ../lib/emboss/ontogetcommon debian/emboss/usr/bin/ontogetcommon rm -f debian/emboss/usr/bin/pepnet ln -sf ../lib/emboss/pepnet debian/emboss/usr/bin/pepnet rm -f debian/emboss/usr/bin/findkm ln -sf ../lib/emboss/findkm debian/emboss/usr/bin/findkm rm -f debian/emboss/usr/bin/fuzznuc ln -sf ../lib/emboss/fuzznuc debian/emboss/usr/bin/fuzznuc rm -f debian/emboss/usr/bin/codcopy ln -sf ../lib/emboss/codcopy debian/emboss/usr/bin/codcopy rm -f debian/emboss/usr/bin/taxget ln -sf ../lib/emboss/taxget debian/emboss/usr/bin/taxget rm -f debian/emboss/usr/bin/wobble ln -sf ../lib/emboss/wobble debian/emboss/usr/bin/wobble rm -f debian/emboss/usr/bin/prettyplot ln -sf ../lib/emboss/prettyplot debian/emboss/usr/bin/prettyplot rm -f debian/emboss/usr/bin/notseq ln -sf ../lib/emboss/notseq debian/emboss/usr/bin/notseq rm -f debian/emboss/usr/bin/seqcount ln -sf ../lib/emboss/seqcount debian/emboss/usr/bin/seqcount rm -f debian/emboss/usr/bin/tfscan ln -sf ../lib/emboss/tfscan debian/emboss/usr/bin/tfscan rm -f debian/emboss/usr/bin/syco ln -sf ../lib/emboss/syco debian/emboss/usr/bin/syco rm -f debian/emboss/usr/bin/water ln -sf ../lib/emboss/water debian/emboss/usr/bin/water rm -f debian/emboss/usr/bin/makenucseq ln -sf ../lib/emboss/makenucseq debian/emboss/usr/bin/makenucseq rm -f debian/emboss/usr/bin/dreg ln -sf ../lib/emboss/dreg debian/emboss/usr/bin/dreg rm -f debian/emboss/usr/bin/trimseq ln -sf ../lib/emboss/trimseq debian/emboss/usr/bin/trimseq rm -f debian/emboss/usr/bin/equicktandem ln -sf ../lib/emboss/equicktandem debian/emboss/usr/bin/equicktandem rm -f debian/emboss/usr/bin/antigenic ln -sf ../lib/emboss/antigenic debian/emboss/usr/bin/antigenic rm -f debian/emboss/usr/bin/prettyseq ln -sf ../lib/emboss/prettyseq debian/emboss/usr/bin/prettyseq rm -f debian/emboss/usr/bin/dbxfasta ln -sf ../lib/emboss/dbxfasta debian/emboss/usr/bin/dbxfasta rm -f debian/emboss/usr/bin/dottup ln -sf ../lib/emboss/dottup debian/emboss/usr/bin/dottup rm -f debian/emboss/usr/bin/whichdb ln -sf ../lib/emboss/whichdb debian/emboss/usr/bin/whichdb rm -f debian/emboss/usr/bin/dbxedam ln -sf ../lib/emboss/dbxedam debian/emboss/usr/bin/dbxedam rm -f debian/emboss/usr/bin/lindna ln -sf ../lib/emboss/lindna debian/emboss/usr/bin/lindna rm -f debian/emboss/usr/bin/maskseq ln -sf ../lib/emboss/maskseq debian/emboss/usr/bin/maskseq rm -f debian/emboss/usr/bin/etandem ln -sf ../lib/emboss/etandem debian/emboss/usr/bin/etandem rm -f debian/emboss/usr/bin/recoder ln -sf ../lib/emboss/recoder debian/emboss/usr/bin/recoder rm -f debian/emboss/usr/bin/isochore ln -sf ../lib/emboss/isochore debian/emboss/usr/bin/isochore rm -f debian/emboss/usr/bin/em_pscan ln -sf ../lib/emboss/pscan debian/emboss/usr/bin/em_pscan rm -f debian/emboss/usr/bin/tcode ln -sf ../lib/emboss/tcode debian/emboss/usr/bin/tcode rm -f debian/emboss/usr/bin/silent ln -sf ../lib/emboss/silent debian/emboss/usr/bin/silent rm -f debian/emboss/usr/bin/twofeat ln -sf ../lib/emboss/twofeat debian/emboss/usr/bin/twofeat rm -f debian/emboss/usr/bin/pasteseq ln -sf ../lib/emboss/pasteseq debian/emboss/usr/bin/pasteseq rm -f debian/emboss/usr/bin/edialign ln -sf ../lib/emboss/edialign debian/emboss/usr/bin/edialign rm -f debian/emboss/usr/bin/dbiblast ln -sf ../lib/emboss/dbiblast debian/emboss/usr/bin/dbiblast rm -f debian/emboss/usr/bin/yank ln -sf ../lib/emboss/yank debian/emboss/usr/bin/yank rm -f debian/emboss/usr/bin/prosextract ln -sf ../lib/emboss/prosextract debian/emboss/usr/bin/prosextract rm -f debian/emboss/usr/bin/restrict ln -sf ../lib/emboss/restrict debian/emboss/usr/bin/restrict rm -f debian/emboss/usr/bin/showseq ln -sf ../lib/emboss/showseq debian/emboss/usr/bin/showseq rm -f debian/emboss/usr/bin/ontogetobsolete ln -sf ../lib/emboss/ontogetobsolete debian/emboss/usr/bin/ontogetobsolete rm -f debian/emboss/usr/bin/preg ln -sf ../lib/emboss/preg debian/emboss/usr/bin/preg rm -f debian/emboss/usr/bin/wordmatch ln -sf ../lib/emboss/wordmatch debian/emboss/usr/bin/wordmatch rm -f debian/emboss/usr/bin/ontoisobsolete ln -sf ../lib/emboss/ontoisobsolete debian/emboss/usr/bin/ontoisobsolete rm -f debian/emboss/usr/bin/polydot ln -sf ../lib/emboss/polydot debian/emboss/usr/bin/polydot rm -f debian/emboss/usr/bin/jaspextract ln -sf ../lib/emboss/jaspextract debian/emboss/usr/bin/jaspextract rm -f debian/emboss/usr/bin/diffseq ln -sf ../lib/emboss/diffseq debian/emboss/usr/bin/diffseq rm -f debian/emboss/usr/bin/shuffleseq ln -sf ../lib/emboss/shuffleseq debian/emboss/usr/bin/shuffleseq rm -f debian/emboss/usr/bin/octanol ln -sf ../lib/emboss/octanol debian/emboss/usr/bin/octanol rm -f debian/emboss/usr/bin/hmoment ln -sf ../lib/emboss/hmoment debian/emboss/usr/bin/hmoment rm -f debian/emboss/usr/bin/embossdata ln -sf ../lib/emboss/embossdata debian/emboss/usr/bin/embossdata rm -f debian/emboss/usr/bin/maskambignuc ln -sf ../lib/emboss/maskambignuc debian/emboss/usr/bin/maskambignuc rm -f debian/emboss/usr/bin/refseqget ln -sf ../lib/emboss/refseqget debian/emboss/usr/bin/refseqget rm -f debian/emboss/usr/bin/dbiflat ln -sf ../lib/emboss/dbiflat debian/emboss/usr/bin/dbiflat rm -f debian/emboss/usr/bin/listor ln -sf ../lib/emboss/listor debian/emboss/usr/bin/listor rm -f debian/emboss/usr/bin/showserver ln -sf ../lib/emboss/showserver debian/emboss/usr/bin/showserver rm -f debian/emboss/usr/bin/skipseq ln -sf ../lib/emboss/skipseq debian/emboss/usr/bin/skipseq rm -f debian/emboss/usr/bin/prophet ln -sf ../lib/emboss/prophet debian/emboss/usr/bin/prophet rm -f debian/emboss/usr/bin/goname ln -sf ../lib/emboss/goname debian/emboss/usr/bin/goname rm -f debian/emboss/usr/bin/chips ln -sf ../lib/emboss/chips debian/emboss/usr/bin/chips rm -f debian/emboss/usr/bin/edamisformat ln -sf ../lib/emboss/edamisformat debian/emboss/usr/bin/edamisformat rm -f debian/emboss/usr/bin/density ln -sf ../lib/emboss/density debian/emboss/usr/bin/density rm -f debian/emboss/usr/bin/consambig ln -sf ../lib/emboss/consambig debian/emboss/usr/bin/consambig rm -f debian/emboss/usr/bin/ontogetup ln -sf ../lib/emboss/ontogetup debian/emboss/usr/bin/ontogetup rm -f debian/emboss/usr/bin/infoalign ln -sf ../lib/emboss/infoalign debian/emboss/usr/bin/infoalign rm -f debian/emboss/usr/bin/needle ln -sf ../lib/emboss/needle debian/emboss/usr/bin/needle rm -f debian/emboss/usr/bin/acdtrace ln -sf ../lib/emboss/acdtrace debian/emboss/usr/bin/acdtrace rm -f debian/emboss/usr/bin/vectorstrip ln -sf ../lib/emboss/vectorstrip debian/emboss/usr/bin/vectorstrip rm -f debian/emboss/usr/bin/megamerger ln -sf ../lib/emboss/megamerger debian/emboss/usr/bin/megamerger rm -f debian/emboss/usr/bin/prophecy ln -sf ../lib/emboss/prophecy debian/emboss/usr/bin/prophecy rm -f debian/emboss/usr/bin/dbxcompress ln -sf ../lib/emboss/dbxcompress debian/emboss/usr/bin/dbxcompress rm -f debian/emboss/usr/bin/codcmp ln -sf ../lib/emboss/codcmp debian/emboss/usr/bin/codcmp rm -f debian/emboss/usr/bin/textsearch ln -sf ../lib/emboss/textsearch debian/emboss/usr/bin/textsearch rm -f debian/emboss/usr/bin/ontotext ln -sf ../lib/emboss/ontotext debian/emboss/usr/bin/ontotext rm -f debian/emboss/usr/bin/printsextract ln -sf ../lib/emboss/printsextract debian/emboss/usr/bin/printsextract rm -f debian/emboss/usr/bin/variationget ln -sf ../lib/emboss/variationget debian/emboss/usr/bin/variationget rm -f debian/emboss/usr/bin/union ln -sf ../lib/emboss/union debian/emboss/usr/bin/union rm -f debian/emboss/usr/bin/showfeat ln -sf ../lib/emboss/showfeat debian/emboss/usr/bin/showfeat rm -f debian/emboss/usr/bin/freak ln -sf ../lib/emboss/freak debian/emboss/usr/bin/freak rm -f debian/emboss/usr/bin/dbigcg ln -sf ../lib/emboss/dbigcg debian/emboss/usr/bin/dbigcg rm -f debian/emboss/usr/bin/degapseq ln -sf ../lib/emboss/degapseq debian/emboss/usr/bin/degapseq rm -f debian/emboss/usr/bin/ontogetroot ln -sf ../lib/emboss/ontogetroot debian/emboss/usr/bin/ontogetroot rm -f debian/emboss/usr/bin/wossinput ln -sf ../lib/emboss/wossinput debian/emboss/usr/bin/wossinput rm -f debian/emboss/usr/bin/revseq ln -sf ../lib/emboss/revseq debian/emboss/usr/bin/revseq rm -f debian/emboss/usr/bin/sigcleave ln -sf ../lib/emboss/sigcleave debian/emboss/usr/bin/sigcleave rm -f debian/emboss/usr/bin/cai ln -sf ../lib/emboss/cai debian/emboss/usr/bin/cai rm -f debian/emboss/usr/bin/embossupdate ln -sf ../lib/emboss/embossupdate debian/emboss/usr/bin/embossupdate rm -f debian/emboss/usr/bin/stretcher ln -sf ../lib/emboss/stretcher debian/emboss/usr/bin/stretcher rm -f debian/emboss/usr/bin/biosed ln -sf ../lib/emboss/biosed debian/emboss/usr/bin/biosed rm -f debian/emboss/usr/bin/wossoperation ln -sf ../lib/emboss/wossoperation debian/emboss/usr/bin/wossoperation rm -f debian/emboss/usr/bin/pepwindow ln -sf ../lib/emboss/pepwindow debian/emboss/usr/bin/pepwindow rm -f debian/emboss/usr/bin/dbxtax ln -sf ../lib/emboss/dbxtax debian/emboss/usr/bin/dbxtax rm -f debian/emboss/usr/bin/seqmatchall ln -sf ../lib/emboss/seqmatchall debian/emboss/usr/bin/seqmatchall rm -f debian/emboss/usr/bin/primersearch ln -sf ../lib/emboss/primersearch debian/emboss/usr/bin/primersearch rm -f debian/emboss/usr/bin/urlget ln -sf ../lib/emboss/urlget debian/emboss/usr/bin/urlget rm -f debian/emboss/usr/bin/emma ln -sf ../lib/emboss/emma debian/emboss/usr/bin/emma rm -f debian/emboss/usr/bin/checktrans ln -sf ../lib/emboss/checktrans debian/emboss/usr/bin/checktrans rm -f debian/emboss/usr/bin/dbxreport ln -sf ../lib/emboss/dbxreport debian/emboss/usr/bin/dbxreport rm -f debian/emboss/usr/bin/drtext ln -sf ../lib/emboss/drtext debian/emboss/usr/bin/drtext rm -f debian/emboss/usr/bin/wossparam ln -sf ../lib/emboss/wossparam debian/emboss/usr/bin/wossparam rm -f debian/emboss/usr/share/man/man1/em_pscan.1e.gz ln -sf pscan.1e.gz debian/emboss/usr/share/man/man1/em_pscan.1e.gz rm -f debian/emboss-lib/usr/share/doc/emboss-lib/ChangeLog ln -sf changelog debian/emboss-lib/usr/share/doc/emboss-lib/ChangeLog rm -f debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so.6 ln -sf libnucleus.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so ln -sf libajaxg.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so.6 ln -sf libajaxdb.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libajax.so ln -sf libajax.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajax.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libacd.so.6 ln -sf libacd.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libacd.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libensembl.so.6 ln -sf libensembl.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libensembl.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libajax.so.6 ln -sf libajax.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajax.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so ln -sf libnucleus.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so ln -sf libeplplot.so.3.2.7 debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libepcre.so.7 ln -sf libepcre.so.7.0.9 debian/emboss-lib/usr/lib/emboss/lib/libepcre.so.7 rm -f debian/emboss-lib/usr/lib/emboss/lib/libacd.so ln -sf libacd.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libacd.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so ln -sf libajaxdb.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libepcre.so ln -sf libepcre.so.7.0.9 debian/emboss-lib/usr/lib/emboss/lib/libepcre.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so.6 ln -sf libajaxg.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libensembl.so ln -sf libensembl.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libensembl.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so.3 ln -sf libeplplot.so.3.2.7 debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so.3 make[1]: Leaving directory '/<>/emboss-6.6.0+dfsg' dh_installmime -a install -d debian/emboss/usr/lib/mime/packages install -p -m0644 debian/emboss.mime debian/emboss/usr/lib/mime/packages/emboss install -d debian/emboss/usr/share/mime/packages install -p -m0644 debian/emboss.sharedmimeinfo debian/emboss/usr/share/mime/packages/emboss.xml dh_lintian -a install -d debian/emboss-lib/usr/share/lintian/overrides install -p -m0644 debian/emboss-lib.lintian-overrides debian/emboss-lib/usr/share/lintian/overrides/emboss-lib dh_perl -a dh_link -a rm -f debian/emboss/usr/share/doc/emboss/ChangeLog ln -sf changelog debian/emboss/usr/share/doc/emboss/ChangeLog rm -f debian/emboss/usr/share/man/man1/em_cons.1e.gz ln -sf cons.1e.gz debian/emboss/usr/share/man/man1/em_cons.1e.gz rm -f debian/emboss/usr/share/man/man1/em_pscan.1e.gz ln -sf pscan.1e.gz debian/emboss/usr/share/man/man1/em_pscan.1e.gz rm -f debian/emboss/usr/bin/wossdata ln -sf ../lib/emboss/wossdata debian/emboss/usr/bin/wossdata rm -f debian/emboss/usr/bin/makeprotseq ln -sf ../lib/emboss/makeprotseq debian/emboss/usr/bin/makeprotseq rm -f debian/emboss/usr/bin/acdc ln -sf ../lib/emboss/acdc debian/emboss/usr/bin/acdc rm -f debian/emboss/usr/bin/backtranseq ln -sf ../lib/emboss/backtranseq debian/emboss/usr/bin/backtranseq rm -f debian/emboss/usr/bin/restover ln -sf ../lib/emboss/restover debian/emboss/usr/bin/restover rm -f debian/emboss/usr/bin/cacheensembl ln -sf ../lib/emboss/cacheensembl debian/emboss/usr/bin/cacheensembl rm -f debian/emboss/usr/bin/cutseq ln -sf ../lib/emboss/cutseq debian/emboss/usr/bin/cutseq rm -f debian/emboss/usr/bin/drfindformat ln -sf ../lib/emboss/drfindformat debian/emboss/usr/bin/drfindformat rm -f debian/emboss/usr/bin/marscan ln -sf ../lib/emboss/marscan debian/emboss/usr/bin/marscan rm -f debian/emboss/usr/bin/trimspace ln -sf ../lib/emboss/trimspace debian/emboss/usr/bin/trimspace rm -f debian/emboss/usr/bin/edamisid ln -sf ../lib/emboss/edamisid debian/emboss/usr/bin/edamisid rm -f debian/emboss/usr/bin/sizeseq ln -sf ../lib/emboss/sizeseq debian/emboss/usr/bin/sizeseq rm -f debian/emboss/usr/bin/oddcomp ln -sf ../lib/emboss/oddcomp debian/emboss/usr/bin/oddcomp rm -f debian/emboss/usr/bin/dbifasta ln -sf ../lib/emboss/dbifasta debian/emboss/usr/bin/dbifasta rm -f debian/emboss/usr/bin/edamhasinput ln -sf ../lib/emboss/edamhasinput debian/emboss/usr/bin/edamhasinput rm -f debian/emboss/usr/bin/taxgetspecies ln -sf ../lib/emboss/taxgetspecies debian/emboss/usr/bin/taxgetspecies rm -f debian/emboss/usr/bin/jaspscan ln -sf ../lib/emboss/jaspscan debian/emboss/usr/bin/jaspscan rm -f debian/emboss/usr/bin/einverted ln -sf ../lib/emboss/einverted debian/emboss/usr/bin/einverted rm -f debian/emboss/usr/bin/est2genome ln -sf ../lib/emboss/est2genome debian/emboss/usr/bin/est2genome rm -f debian/emboss/usr/bin/msbar ln -sf ../lib/emboss/msbar debian/emboss/usr/bin/msbar rm -f debian/emboss/usr/bin/tranalign ln -sf ../lib/emboss/tranalign debian/emboss/usr/bin/tranalign rm -f debian/emboss/usr/bin/btwisted ln -sf ../lib/emboss/btwisted debian/emboss/usr/bin/btwisted rm -f debian/emboss/usr/bin/cutgextract ln -sf ../lib/emboss/cutgextract debian/emboss/usr/bin/cutgextract rm -f debian/emboss/usr/bin/maskfeat ln -sf ../lib/emboss/maskfeat debian/emboss/usr/bin/maskfeat rm -f debian/emboss/usr/bin/dotpath ln -sf ../lib/emboss/dotpath debian/emboss/usr/bin/dotpath rm -f debian/emboss/usr/bin/dotmatcher ln -sf ../lib/emboss/dotmatcher debian/emboss/usr/bin/dotmatcher rm -f debian/emboss/usr/bin/seqxref ln -sf ../lib/emboss/seqxref debian/emboss/usr/bin/seqxref rm -f debian/emboss/usr/bin/featmerge ln -sf ../lib/emboss/featmerge debian/emboss/usr/bin/featmerge rm -f debian/emboss/usr/bin/edamhasoutput ln -sf ../lib/emboss/edamhasoutput debian/emboss/usr/bin/edamhasoutput rm -f debian/emboss/usr/bin/taxgetrank ln -sf ../lib/emboss/taxgetrank debian/emboss/usr/bin/taxgetrank rm -f debian/emboss/usr/bin/dbxuncompress ln -sf ../lib/emboss/dbxuncompress debian/emboss/usr/bin/dbxuncompress rm -f debian/emboss/usr/bin/tmap ln -sf ../lib/emboss/tmap debian/emboss/usr/bin/tmap rm -f debian/emboss/usr/bin/aaindexextract ln -sf ../lib/emboss/aaindexextract debian/emboss/usr/bin/aaindexextract rm -f debian/emboss/usr/bin/tfextract ln -sf ../lib/emboss/tfextract debian/emboss/usr/bin/tfextract rm -f debian/emboss/usr/bin/drget ln -sf ../lib/emboss/drget debian/emboss/usr/bin/drget rm -f debian/emboss/usr/bin/drfindid ln -sf ../lib/emboss/drfindid debian/emboss/usr/bin/drfindid rm -f debian/emboss/usr/bin/taxgetup ln -sf ../lib/emboss/taxgetup debian/emboss/usr/bin/taxgetup rm -f debian/emboss/usr/bin/helixturnhelix ln -sf ../lib/emboss/helixturnhelix debian/emboss/usr/bin/helixturnhelix rm -f debian/emboss/usr/bin/redata ln -sf ../lib/emboss/redata debian/emboss/usr/bin/redata rm -f debian/emboss/usr/bin/newseq ln -sf ../lib/emboss/newseq debian/emboss/usr/bin/newseq rm -f debian/emboss/usr/bin/xmltext ln -sf ../lib/emboss/xmltext debian/emboss/usr/bin/xmltext rm -f debian/emboss/usr/bin/psiphi ln -sf ../lib/emboss/psiphi debian/emboss/usr/bin/psiphi rm -f debian/emboss/usr/bin/drfinddata ln -sf ../lib/emboss/drfinddata debian/emboss/usr/bin/drfinddata rm -f debian/emboss/usr/bin/newcpgseek ln -sf ../lib/emboss/newcpgseek debian/emboss/usr/bin/newcpgseek rm -f debian/emboss/usr/bin/seqxrefget ln -sf ../lib/emboss/seqxrefget debian/emboss/usr/bin/seqxrefget rm -f debian/emboss/usr/bin/maskambigprot ln -sf ../lib/emboss/maskambigprot debian/emboss/usr/bin/maskambigprot rm -f debian/emboss/usr/bin/showalign ln -sf ../lib/emboss/showalign debian/emboss/usr/bin/showalign rm -f debian/emboss/usr/bin/cpgreport ln -sf ../lib/emboss/cpgreport debian/emboss/usr/bin/cpgreport rm -f debian/emboss/usr/bin/compseq ln -sf ../lib/emboss/compseq debian/emboss/usr/bin/compseq rm -f debian/emboss/usr/bin/wossname ln -sf ../lib/emboss/wossname debian/emboss/usr/bin/wossname rm -f debian/emboss/usr/bin/sirna ln -sf ../lib/emboss/sirna debian/emboss/usr/bin/sirna rm -f debian/emboss/usr/bin/showdb ln -sf ../lib/emboss/showdb debian/emboss/usr/bin/showdb rm -f debian/emboss/usr/bin/seqret ln -sf ../lib/emboss/seqret debian/emboss/usr/bin/seqret rm -f debian/emboss/usr/bin/xmlget ln -sf ../lib/emboss/xmlget debian/emboss/usr/bin/xmlget rm -f debian/emboss/usr/bin/patmatmotifs ln -sf ../lib/emboss/patmatmotifs debian/emboss/usr/bin/patmatmotifs rm -f debian/emboss/usr/bin/inforesidue ln -sf ../lib/emboss/inforesidue debian/emboss/usr/bin/inforesidue rm -f debian/emboss/usr/bin/entret ln -sf ../lib/emboss/entret debian/emboss/usr/bin/entret rm -f debian/emboss/usr/bin/chaos ln -sf ../lib/emboss/chaos debian/emboss/usr/bin/chaos rm -f debian/emboss/usr/bin/aligncopy ln -sf ../lib/emboss/aligncopy debian/emboss/usr/bin/aligncopy rm -f debian/emboss/usr/bin/infoseq ln -sf ../lib/emboss/infoseq debian/emboss/usr/bin/infoseq rm -f debian/emboss/usr/bin/seealso ln -sf ../lib/emboss/seealso debian/emboss/usr/bin/seealso rm -f debian/emboss/usr/bin/ontogetdown ln -sf ../lib/emboss/ontogetdown debian/emboss/usr/bin/ontogetdown rm -f debian/emboss/usr/bin/epestfind ln -sf ../lib/emboss/epestfind debian/emboss/usr/bin/epestfind rm -f debian/emboss/usr/bin/iep ln -sf ../lib/emboss/iep debian/emboss/usr/bin/iep rm -f debian/emboss/usr/bin/infoassembly ln -sf ../lib/emboss/infoassembly debian/emboss/usr/bin/infoassembly rm -f debian/emboss/usr/bin/cachedas ln -sf ../lib/emboss/cachedas debian/emboss/usr/bin/cachedas rm -f debian/emboss/usr/bin/supermatcher ln -sf ../lib/emboss/supermatcher debian/emboss/usr/bin/supermatcher rm -f debian/emboss/usr/bin/fuzzpro ln -sf ../lib/emboss/fuzzpro debian/emboss/usr/bin/fuzzpro rm -f debian/emboss/usr/bin/stssearch ln -sf ../lib/emboss/stssearch debian/emboss/usr/bin/stssearch rm -f debian/emboss/usr/bin/edamname ln -sf ../lib/emboss/edamname debian/emboss/usr/bin/edamname rm -f debian/emboss/usr/bin/pepinfo ln -sf ../lib/emboss/pepinfo debian/emboss/usr/bin/pepinfo rm -f debian/emboss/usr/bin/remap ln -sf ../lib/emboss/remap debian/emboss/usr/bin/remap rm -f debian/emboss/usr/bin/acdvalid ln -sf ../lib/emboss/acdvalid debian/emboss/usr/bin/acdvalid rm -f debian/emboss/usr/bin/splitter ln -sf ../lib/emboss/splitter debian/emboss/usr/bin/splitter rm -f debian/emboss/usr/bin/banana ln -sf ../lib/emboss/banana debian/emboss/usr/bin/banana rm -f debian/emboss/usr/bin/extractfeat ln -sf ../lib/emboss/extractfeat debian/emboss/usr/bin/extractfeat rm -f debian/emboss/usr/bin/dan ln -sf ../lib/emboss/dan debian/emboss/usr/bin/dan rm -f debian/emboss/usr/bin/acdgalaxy ln -sf ../lib/emboss/acdgalaxy debian/emboss/usr/bin/acdgalaxy rm -f debian/emboss/usr/bin/garnier ln -sf ../lib/emboss/garnier debian/emboss/usr/bin/garnier rm -f debian/emboss/usr/bin/wordfinder ln -sf ../lib/emboss/wordfinder debian/emboss/usr/bin/wordfinder rm -f debian/emboss/usr/bin/ontoget ln -sf ../lib/emboss/ontoget debian/emboss/usr/bin/ontoget rm -f debian/emboss/usr/bin/dbxobo ln -sf ../lib/emboss/dbxobo debian/emboss/usr/bin/dbxobo rm -f debian/emboss/usr/bin/dbxgcg ln -sf ../lib/emboss/dbxgcg debian/emboss/usr/bin/dbxgcg rm -f debian/emboss/usr/bin/godef ln -sf ../lib/emboss/godef debian/emboss/usr/bin/godef rm -f debian/emboss/usr/bin/feattext ln -sf ../lib/emboss/feattext debian/emboss/usr/bin/feattext rm -f debian/emboss/usr/bin/aligncopypair ln -sf ../lib/emboss/aligncopypair debian/emboss/usr/bin/aligncopypair rm -f debian/emboss/usr/bin/dbtell ln -sf ../lib/emboss/dbtell debian/emboss/usr/bin/dbtell rm -f debian/emboss/usr/bin/nthseqset ln -sf ../lib/emboss/nthseqset debian/emboss/usr/bin/nthseqset rm -f debian/emboss/usr/bin/rebaseextract ln -sf ../lib/emboss/rebaseextract debian/emboss/usr/bin/rebaseextract rm -f debian/emboss/usr/bin/patmatdb ln -sf ../lib/emboss/patmatdb debian/emboss/usr/bin/patmatdb rm -f debian/emboss/usr/bin/palindrome ln -sf ../lib/emboss/palindrome debian/emboss/usr/bin/palindrome rm -f debian/emboss/usr/bin/descseq ln -sf ../lib/emboss/descseq debian/emboss/usr/bin/descseq rm -f debian/emboss/usr/bin/profit ln -sf ../lib/emboss/profit debian/emboss/usr/bin/profit rm -f debian/emboss/usr/bin/pepwindowall ln -sf ../lib/emboss/pepwindowall debian/emboss/usr/bin/pepwindowall rm -f debian/emboss/usr/bin/extractalign ln -sf ../lib/emboss/extractalign debian/emboss/usr/bin/extractalign rm -f debian/emboss/usr/bin/showpep ln -sf ../lib/emboss/showpep debian/emboss/usr/bin/showpep rm -f debian/emboss/usr/bin/notab ln -sf ../lib/emboss/notab debian/emboss/usr/bin/notab rm -f debian/emboss/usr/bin/eprimer3 ln -sf ../lib/emboss/eprimer3 debian/emboss/usr/bin/eprimer3 rm -f debian/emboss/usr/bin/matcher ln -sf ../lib/emboss/matcher debian/emboss/usr/bin/matcher rm -f debian/emboss/usr/bin/fuzztran ln -sf ../lib/emboss/fuzztran debian/emboss/usr/bin/fuzztran rm -f debian/emboss/usr/bin/cirdna ln -sf ../lib/emboss/cirdna debian/emboss/usr/bin/cirdna rm -f debian/emboss/usr/bin/coderet ln -sf ../lib/emboss/coderet debian/emboss/usr/bin/coderet rm -f debian/emboss/usr/bin/merger ln -sf ../lib/emboss/merger debian/emboss/usr/bin/merger rm -f debian/emboss/usr/bin/acdpretty ln -sf ../lib/emboss/acdpretty debian/emboss/usr/bin/acdpretty rm -f debian/emboss/usr/bin/splitsource ln -sf ../lib/emboss/splitsource debian/emboss/usr/bin/splitsource rm -f debian/emboss/usr/bin/edamdef ln -sf ../lib/emboss/edamdef debian/emboss/usr/bin/edamdef rm -f debian/emboss/usr/bin/cachedbfetch ln -sf ../lib/emboss/cachedbfetch debian/emboss/usr/bin/cachedbfetch rm -f debian/emboss/usr/bin/acdtable ln -sf ../lib/emboss/acdtable debian/emboss/usr/bin/acdtable rm -f debian/emboss/usr/bin/textget ln -sf ../lib/emboss/textget debian/emboss/usr/bin/textget rm -f debian/emboss/usr/bin/mwfilter ln -sf ../lib/emboss/mwfilter debian/emboss/usr/bin/mwfilter rm -f debian/emboss/usr/bin/pepdigest ln -sf ../lib/emboss/pepdigest debian/emboss/usr/bin/pepdigest rm -f debian/emboss/usr/bin/featcopy ln -sf ../lib/emboss/featcopy debian/emboss/usr/bin/featcopy rm -f debian/emboss/usr/bin/taxgetdown ln -sf ../lib/emboss/taxgetdown debian/emboss/usr/bin/taxgetdown rm -f debian/emboss/usr/bin/seqretsetall ln -sf ../lib/emboss/seqretsetall debian/emboss/usr/bin/seqretsetall rm -f debian/emboss/usr/bin/charge ln -sf ../lib/emboss/charge debian/emboss/usr/bin/charge rm -f debian/emboss/usr/bin/featreport ln -sf ../lib/emboss/featreport debian/emboss/usr/bin/featreport rm -f debian/emboss/usr/bin/seqretsplit ln -sf ../lib/emboss/seqretsplit debian/emboss/usr/bin/seqretsplit rm -f debian/emboss/usr/bin/pepcoil ln -sf ../lib/emboss/pepcoil debian/emboss/usr/bin/pepcoil rm -f debian/emboss/usr/bin/emowse ln -sf ../lib/emboss/emowse debian/emboss/usr/bin/emowse rm -f debian/emboss/usr/bin/trimest ln -sf ../lib/emboss/trimest debian/emboss/usr/bin/trimest rm -f debian/emboss/usr/bin/tfm ln -sf ../lib/emboss/tfm debian/emboss/usr/bin/tfm rm -f debian/emboss/usr/bin/plotcon ln -sf ../lib/emboss/plotcon debian/emboss/usr/bin/plotcon rm -f debian/emboss/usr/bin/newcpgreport ln -sf ../lib/emboss/newcpgreport debian/emboss/usr/bin/newcpgreport rm -f debian/emboss/usr/bin/acdlog ln -sf ../lib/emboss/acdlog debian/emboss/usr/bin/acdlog rm -f debian/emboss/usr/bin/abiview ln -sf ../lib/emboss/abiview debian/emboss/usr/bin/abiview rm -f debian/emboss/usr/bin/needleall ln -sf ../lib/emboss/needleall debian/emboss/usr/bin/needleall rm -f debian/emboss/usr/bin/cpgplot ln -sf ../lib/emboss/cpgplot debian/emboss/usr/bin/cpgplot rm -f debian/emboss/usr/bin/drfindresource ln -sf ../lib/emboss/drfindresource debian/emboss/usr/bin/drfindresource rm -f debian/emboss/usr/bin/extractseq ln -sf ../lib/emboss/extractseq debian/emboss/usr/bin/extractseq rm -f debian/emboss/usr/bin/eprimer32 ln -sf ../lib/emboss/eprimer32 debian/emboss/usr/bin/eprimer32 rm -f debian/emboss/usr/bin/plotorf ln -sf ../lib/emboss/plotorf debian/emboss/usr/bin/plotorf rm -f debian/emboss/usr/bin/backtranambig ln -sf ../lib/emboss/backtranambig debian/emboss/usr/bin/backtranambig rm -f debian/emboss/usr/bin/em_cons ln -sf ../lib/emboss/cons debian/emboss/usr/bin/em_cons rm -f debian/emboss/usr/bin/nospace ln -sf ../lib/emboss/nospace debian/emboss/usr/bin/nospace rm -f debian/emboss/usr/bin/pepwheel ln -sf ../lib/emboss/pepwheel debian/emboss/usr/bin/pepwheel rm -f debian/emboss/usr/bin/noreturn ln -sf ../lib/emboss/noreturn debian/emboss/usr/bin/noreturn rm -f debian/emboss/usr/bin/infobase ln -sf ../lib/emboss/infobase debian/emboss/usr/bin/infobase rm -f debian/emboss/usr/bin/mwcontam ln -sf ../lib/emboss/mwcontam debian/emboss/usr/bin/mwcontam rm -f debian/emboss/usr/bin/assemblyget ln -sf ../lib/emboss/assemblyget debian/emboss/usr/bin/assemblyget rm -f debian/emboss/usr/bin/distmat ln -sf ../lib/emboss/distmat debian/emboss/usr/bin/distmat rm -f debian/emboss/usr/bin/skipredundant ln -sf ../lib/emboss/skipredundant 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ln -sf ../lib/emboss/dbxfasta debian/emboss/usr/bin/dbxfasta rm -f debian/emboss/usr/bin/dottup ln -sf ../lib/emboss/dottup debian/emboss/usr/bin/dottup rm -f debian/emboss/usr/bin/whichdb ln -sf ../lib/emboss/whichdb debian/emboss/usr/bin/whichdb rm -f debian/emboss/usr/bin/dbxedam ln -sf ../lib/emboss/dbxedam debian/emboss/usr/bin/dbxedam rm -f debian/emboss/usr/bin/lindna ln -sf ../lib/emboss/lindna debian/emboss/usr/bin/lindna rm -f debian/emboss/usr/bin/maskseq ln -sf ../lib/emboss/maskseq debian/emboss/usr/bin/maskseq rm -f debian/emboss/usr/bin/etandem ln -sf ../lib/emboss/etandem debian/emboss/usr/bin/etandem rm -f debian/emboss/usr/bin/recoder ln -sf ../lib/emboss/recoder debian/emboss/usr/bin/recoder rm -f debian/emboss/usr/bin/isochore ln -sf ../lib/emboss/isochore debian/emboss/usr/bin/isochore rm -f debian/emboss/usr/bin/em_pscan ln -sf ../lib/emboss/pscan debian/emboss/usr/bin/em_pscan rm -f debian/emboss/usr/bin/tcode ln -sf ../lib/emboss/tcode 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../lib/emboss/edamisformat debian/emboss/usr/bin/edamisformat rm -f debian/emboss/usr/bin/density ln -sf ../lib/emboss/density debian/emboss/usr/bin/density rm -f debian/emboss/usr/bin/consambig ln -sf ../lib/emboss/consambig debian/emboss/usr/bin/consambig rm -f debian/emboss/usr/bin/ontogetup ln -sf ../lib/emboss/ontogetup debian/emboss/usr/bin/ontogetup rm -f debian/emboss/usr/bin/infoalign ln -sf ../lib/emboss/infoalign debian/emboss/usr/bin/infoalign rm -f debian/emboss/usr/bin/needle ln -sf ../lib/emboss/needle debian/emboss/usr/bin/needle rm -f debian/emboss/usr/bin/acdtrace ln -sf ../lib/emboss/acdtrace debian/emboss/usr/bin/acdtrace rm -f debian/emboss/usr/bin/vectorstrip ln -sf ../lib/emboss/vectorstrip debian/emboss/usr/bin/vectorstrip rm -f debian/emboss/usr/bin/megamerger ln -sf ../lib/emboss/megamerger debian/emboss/usr/bin/megamerger rm -f debian/emboss/usr/bin/prophecy ln -sf ../lib/emboss/prophecy debian/emboss/usr/bin/prophecy rm -f debian/emboss/usr/bin/dbxcompress ln -sf ../lib/emboss/dbxcompress debian/emboss/usr/bin/dbxcompress rm -f debian/emboss/usr/bin/codcmp ln -sf ../lib/emboss/codcmp debian/emboss/usr/bin/codcmp rm -f debian/emboss/usr/bin/textsearch ln -sf ../lib/emboss/textsearch debian/emboss/usr/bin/textsearch rm -f debian/emboss/usr/bin/ontotext ln -sf ../lib/emboss/ontotext debian/emboss/usr/bin/ontotext rm -f debian/emboss/usr/bin/printsextract ln -sf ../lib/emboss/printsextract debian/emboss/usr/bin/printsextract rm -f debian/emboss/usr/bin/variationget ln -sf ../lib/emboss/variationget debian/emboss/usr/bin/variationget rm -f debian/emboss/usr/bin/union ln -sf ../lib/emboss/union debian/emboss/usr/bin/union rm -f debian/emboss/usr/bin/showfeat ln -sf ../lib/emboss/showfeat debian/emboss/usr/bin/showfeat rm -f debian/emboss/usr/bin/freak ln -sf ../lib/emboss/freak debian/emboss/usr/bin/freak rm -f debian/emboss/usr/bin/dbigcg ln -sf ../lib/emboss/dbigcg debian/emboss/usr/bin/dbigcg rm -f debian/emboss/usr/bin/degapseq ln -sf ../lib/emboss/degapseq debian/emboss/usr/bin/degapseq rm -f debian/emboss/usr/bin/ontogetroot ln -sf ../lib/emboss/ontogetroot debian/emboss/usr/bin/ontogetroot rm -f debian/emboss/usr/bin/wossinput ln -sf ../lib/emboss/wossinput debian/emboss/usr/bin/wossinput rm -f debian/emboss/usr/bin/revseq ln -sf ../lib/emboss/revseq debian/emboss/usr/bin/revseq rm -f debian/emboss/usr/bin/sigcleave ln -sf ../lib/emboss/sigcleave debian/emboss/usr/bin/sigcleave rm -f debian/emboss/usr/bin/cai ln -sf ../lib/emboss/cai debian/emboss/usr/bin/cai rm -f debian/emboss/usr/bin/embossupdate ln -sf ../lib/emboss/embossupdate debian/emboss/usr/bin/embossupdate rm -f debian/emboss/usr/bin/stretcher ln -sf ../lib/emboss/stretcher debian/emboss/usr/bin/stretcher rm -f debian/emboss/usr/bin/biosed ln -sf ../lib/emboss/biosed debian/emboss/usr/bin/biosed rm -f debian/emboss/usr/bin/wossoperation ln -sf ../lib/emboss/wossoperation debian/emboss/usr/bin/wossoperation rm -f debian/emboss/usr/bin/pepwindow ln -sf ../lib/emboss/pepwindow debian/emboss/usr/bin/pepwindow rm -f debian/emboss/usr/bin/dbxtax ln -sf ../lib/emboss/dbxtax debian/emboss/usr/bin/dbxtax rm -f debian/emboss/usr/bin/seqmatchall ln -sf ../lib/emboss/seqmatchall debian/emboss/usr/bin/seqmatchall rm -f debian/emboss/usr/bin/primersearch ln -sf ../lib/emboss/primersearch debian/emboss/usr/bin/primersearch rm -f debian/emboss/usr/bin/urlget ln -sf ../lib/emboss/urlget debian/emboss/usr/bin/urlget rm -f debian/emboss/usr/bin/emma ln -sf ../lib/emboss/emma debian/emboss/usr/bin/emma rm -f debian/emboss/usr/bin/checktrans ln -sf ../lib/emboss/checktrans debian/emboss/usr/bin/checktrans rm -f debian/emboss/usr/bin/dbxreport ln -sf ../lib/emboss/dbxreport debian/emboss/usr/bin/dbxreport rm -f debian/emboss/usr/bin/drtext ln -sf ../lib/emboss/drtext debian/emboss/usr/bin/drtext rm -f debian/emboss/usr/bin/wossparam ln -sf ../lib/emboss/wossparam debian/emboss/usr/bin/wossparam rm -f debian/emboss-lib/usr/share/doc/emboss-lib/ChangeLog ln -sf changelog debian/emboss-lib/usr/share/doc/emboss-lib/ChangeLog rm -f debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so.6 ln -sf libnucleus.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so ln -sf libajaxg.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so.6 ln -sf libajaxdb.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libajax.so ln -sf libajax.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajax.so rm -f debian/emboss-lib/usr/lib/emboss/lib/libacd.so.6 ln -sf libacd.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libacd.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libensembl.so.6 ln -sf libensembl.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libensembl.so.6 rm -f debian/emboss-lib/usr/lib/emboss/lib/libajax.so.6 ln -sf libajax.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajax.so.6 rm 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usr/share/man/man1/pepinfo.1e usr/share/man/man1/pepnet.1e usr/share/man/man1/pepstats.1e usr/share/man/man1/pepwheel.1e usr/share/man/man1/pepwindow.1e usr/share/man/man1/pepwindowall.1e usr/share/man/man1/plotcon.1e usr/share/man/man1/plotorf.1e usr/share/man/man1/polydot.1e usr/share/man/man1/preg.1e usr/share/man/man1/prettyplot.1e usr/share/man/man1/prettyseq.1e usr/share/man/man1/prima.1e usr/share/man/man1/primers.1e usr/share/man/man1/primersearch.1e usr/share/man/man1/printsextract.1e usr/share/man/man1/profit.1e usr/share/man/man1/prophecy.1e usr/share/man/man1/prophet.1e usr/share/man/man1/prosextract.1e usr/share/man/man1/pscan.1e usr/share/man/man1/psiphi.1e usr/share/man/man1/rebaseextract.1e usr/share/man/man1/recoder.1e usr/share/man/man1/redata.1e usr/share/man/man1/remap.1e usr/share/man/man1/restover.1e usr/share/man/man1/restrict.1e usr/share/man/man1/revseq.1e usr/share/man/man1/seealso.1e usr/share/man/man1/seqcount.1e usr/share/man/man1/seqgo.1e usr/share/man/man1/seqinfo.1e usr/share/man/man1/seqmatchall.1e usr/share/man/man1/seqret.1e usr/share/man/man1/seqretall.1e usr/share/man/man1/seqretallfeat.1e usr/share/man/man1/seqretset.1e usr/share/man/man1/seqretsetall.1e usr/share/man/man1/seqretsingle.1e usr/share/man/man1/seqretsplit.1e usr/share/man/man1/seqrettype.1e usr/share/man/man1/seqtax.1e usr/share/man/man1/seqxref.1e usr/share/man/man1/seqxrefall.1e usr/share/man/man1/seqxrefget.1e usr/share/man/man1/servertell.1e usr/share/man/man1/showalign.1e usr/share/man/man1/showdb.1e usr/share/man/man1/showfeat.1e usr/share/man/man1/showorf.1e usr/share/man/man1/showpep.1e usr/share/man/man1/showseq.1e usr/share/man/man1/showserver.1e usr/share/man/man1/shuffleseq.1e usr/share/man/man1/sigcleave.1e usr/share/man/man1/silent.1e usr/share/man/man1/sirna.1e usr/share/man/man1/sixpack.1e usr/share/man/man1/sizeseq.1e usr/share/man/man1/skipredundant.1e usr/share/man/man1/skipseq.1e usr/share/man/man1/splitsource.1e usr/share/man/man1/splitter.1e usr/share/man/man1/sqltest.1e usr/share/man/man1/stretcher.1e usr/share/man/man1/stssearch.1e usr/share/man/man1/supermatcher.1e usr/share/man/man1/syco.1e usr/share/man/man1/taxget.1e usr/share/man/man1/taxgetdown.1e usr/share/man/man1/taxgetrank.1e usr/share/man/man1/taxgetspecies.1e usr/share/man/man1/taxgetup.1e usr/share/man/man1/taxseq.1e usr/share/man/man1/tcode.1e usr/share/man/man1/testplot.1e usr/share/man/man1/textget.1e usr/share/man/man1/textsearch.1e usr/share/man/man1/texttotext.1e usr/share/man/man1/texttoxml.1e usr/share/man/man1/textvalid.1e usr/share/man/man1/tfextract.1e usr/share/man/man1/tfm.1e usr/share/man/man1/tfscan.1e usr/share/man/man1/tmap.1e usr/share/man/man1/tranalign.1e usr/share/man/man1/transeq.1e usr/share/man/man1/treetypedisplay.1e usr/share/man/man1/trimest.1e usr/share/man/man1/trimseq.1e usr/share/man/man1/trimspace.1e usr/share/man/man1/twofeat.1e usr/share/man/man1/union.1e usr/share/man/man1/urlget.1e usr/share/man/man1/vectorstrip.1e usr/share/man/man1/water.1e usr/share/man/man1/whichdb.1e usr/share/man/man1/wobble.1e usr/share/man/man1/wordcount.1e usr/share/man/man1/wordfinder.1e usr/share/man/man1/wordmatch.1e usr/share/man/man1/wossdata.1e usr/share/man/man1/wossinput.1e usr/share/man/man1/wossname.1e usr/share/man/man1/wossoperation.1e usr/share/man/man1/wossoutput.1e usr/share/man/man1/wossparam.1e usr/share/man/man1/wosstopic.1e usr/share/man/man1/xmltotext.1e usr/share/man/man1/xmltoxml.1e usr/share/man/man1/xmltransform.1e usr/share/man/man1/yank.1e cd '/<>/emboss-6.6.0+dfsg' rm -f debian/emboss/usr/share/doc/emboss/ChangeLog ln -sf changelog.gz debian/emboss/usr/share/doc/emboss/ChangeLog.gz cd debian/emboss-lib chmod a-x usr/share/doc/emboss-lib/changelog usr/share/doc/emboss-lib/changelog.Debian gzip -9nf usr/share/doc/emboss-lib/changelog usr/share/doc/emboss-lib/changelog.Debian cd '/<>/emboss-6.6.0+dfsg' rm -f debian/emboss-lib/usr/share/doc/emboss-lib/ChangeLog ln -sf changelog.gz debian/emboss-lib/usr/share/doc/emboss-lib/ChangeLog.gz dh_fixperms -a find debian/emboss -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/emboss ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/emboss/usr/share/doc -type f ! -regex 'debian/emboss/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 0755 find debian/emboss/usr/share/man -type f -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss/usr/lib/i386-linux-gnu/perl5/5.24 debian/emboss/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X find debian/emboss -perm -5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss/usr/bin -type f -print0 2>/dev/null | xargs -0r chmod a+x find debian/emboss/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w find debian/emboss-lib -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/emboss-lib ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/emboss-lib/usr/share/doc -type f ! -regex 'debian/emboss-lib/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss-lib/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 0755 find debian/emboss-lib/usr/share/man -type f -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss-lib/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss-lib/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss-lib/usr/lib/i386-linux-gnu/perl5/5.24 debian/emboss-lib/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X find debian/emboss-lib -perm -5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 0644 find debian/emboss-lib/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w find debian/emboss-lib/usr/share/lintian/overrides -type f -print0 2>/dev/null | xargs -0r chmod 0644 dh_strip -a dh_strip debug symbol extraction: enabling -a due to Build-Debug-Symbols: yes in /CurrentlyBuilding dh_strip debug symbol extraction: all non-arch-all packages for this build platform i386: emboss emboss-lib dh_strip debug symbol extraction: packages to act on: emboss emboss-lib dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe /usr/bin/pkg_create_dbgsym: deferring build of .ddeb to dh_gencontrol Using buildid for compat level >= 9 dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe /usr/bin/pkg_create_dbgsym: deferring build of .ddeb to dh_gencontrol strip --remove-section=.comment --remove-section=.note debian/emboss/usr/lib/emboss/wossparam strip --remove-section=.comment --remove-section=.note debian/emboss/usr/lib/emboss/drtext strip --remove-section=.comment --remove-section=.note debian/emboss/usr/lib/emboss/dbxreport strip --remove-section=.comment --remove-section=.note debian/emboss/usr/lib/emboss/checktrans strip --remove-section=.comment --remove-section=.note debian/emboss/usr/lib/emboss/emma strip --remove-section=.comment --remove-section=.note debian/emboss/usr/lib/emboss/urlget strip --remove-section=.comment --remove-section=.note 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--enable-deterministic-archives debian/emboss-lib/usr/lib/emboss/lib/libajaxg.a strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/emboss-lib/usr/lib/emboss/lib/libacd.a strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/emboss-lib/usr/lib/emboss/lib/libepcre.a dh_makeshlibs -a rm -f debian/emboss/DEBIAN/shlibs rm -f debian/emboss-lib/DEBIAN/shlibs install -d debian/emboss-lib/DEBIAN echo 'libacd 6 emboss-lib' >>debian/emboss-lib/DEBIAN/shlibs echo 'libajax 6 emboss-lib' >>debian/emboss-lib/DEBIAN/shlibs echo 'libajaxdb 6 emboss-lib' >>debian/emboss-lib/DEBIAN/shlibs echo 'libajaxg 6 emboss-lib' >>debian/emboss-lib/DEBIAN/shlibs echo 'libensembl 6 emboss-lib' >>debian/emboss-lib/DEBIAN/shlibs echo 'libepcre 7 emboss-lib' >>debian/emboss-lib/DEBIAN/shlibs echo 'libeplplot 3 emboss-lib' >>debian/emboss-lib/DEBIAN/shlibs echo 'libnucleus 6 emboss-lib' >>debian/emboss-lib/DEBIAN/shlibs chmod 0644 -- debian/emboss-lib/DEBIAN/shlibs chown 0:0 -- debian/emboss-lib/DEBIAN/shlibs install -d debian/.debhelper/generated/emboss-lib mv -f debian/.debhelper/generated/emboss-lib/triggers.new debian/.debhelper/generated/emboss-lib/triggers dh_shlibdeps -a install -d debian/emboss/DEBIAN dpkg-shlibdeps -Tdebian/emboss.substvars debian/emboss/usr/lib/emboss/wossparam debian/emboss/usr/lib/emboss/drtext debian/emboss/usr/lib/emboss/dbxreport debian/emboss/usr/lib/emboss/checktrans debian/emboss/usr/lib/emboss/emma debian/emboss/usr/lib/emboss/urlget debian/emboss/usr/lib/emboss/primersearch debian/emboss/usr/lib/emboss/seqmatchall debian/emboss/usr/lib/emboss/dbxtax debian/emboss/usr/lib/emboss/pepwindow debian/emboss/usr/lib/emboss/wossoperation debian/emboss/usr/lib/emboss/biosed debian/emboss/usr/lib/emboss/stretcher debian/emboss/usr/lib/emboss/embossupdate debian/emboss/usr/lib/emboss/cai debian/emboss/usr/lib/emboss/sigcleave 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debian/emboss/usr/lib/emboss/rebaseextract debian/emboss/usr/lib/emboss/nthseqset debian/emboss/usr/lib/emboss/dbtell debian/emboss/usr/lib/emboss/aligncopypair debian/emboss/usr/lib/emboss/feattext debian/emboss/usr/lib/emboss/godef debian/emboss/usr/lib/emboss/dbxgcg debian/emboss/usr/lib/emboss/dbxobo debian/emboss/usr/lib/emboss/ontoget debian/emboss/usr/lib/emboss/wordfinder debian/emboss/usr/lib/emboss/garnier debian/emboss/usr/lib/emboss/acdgalaxy debian/emboss/usr/lib/emboss/dan debian/emboss/usr/lib/emboss/extractfeat debian/emboss/usr/lib/emboss/banana debian/emboss/usr/lib/emboss/splitter debian/emboss/usr/lib/emboss/acdvalid debian/emboss/usr/lib/emboss/remap debian/emboss/usr/lib/emboss/pepinfo debian/emboss/usr/lib/emboss/edamname debian/emboss/usr/lib/emboss/stssearch debian/emboss/usr/lib/emboss/fuzzpro debian/emboss/usr/lib/emboss/supermatcher debian/emboss/usr/lib/emboss/cachedas debian/emboss/usr/lib/emboss/infoassembly debian/emboss/usr/lib/emboss/iep debian/emboss/usr/lib/emboss/epestfind debian/emboss/usr/lib/emboss/ontogetdown debian/emboss/usr/lib/emboss/seealso debian/emboss/usr/lib/emboss/infoseq debian/emboss/usr/lib/emboss/aligncopy debian/emboss/usr/lib/emboss/chaos debian/emboss/usr/lib/emboss/entret debian/emboss/usr/lib/emboss/inforesidue debian/emboss/usr/lib/emboss/patmatmotifs debian/emboss/usr/lib/emboss/xmlget debian/emboss/usr/lib/emboss/seqret debian/emboss/usr/lib/emboss/showdb debian/emboss/usr/lib/emboss/sirna debian/emboss/usr/lib/emboss/wossname debian/emboss/usr/lib/emboss/compseq debian/emboss/usr/lib/emboss/cpgreport debian/emboss/usr/lib/emboss/showalign debian/emboss/usr/lib/emboss/maskambigprot debian/emboss/usr/lib/emboss/seqxrefget debian/emboss/usr/lib/emboss/newcpgseek debian/emboss/usr/lib/emboss/drfinddata debian/emboss/usr/lib/emboss/psiphi debian/emboss/usr/lib/emboss/xmltext debian/emboss/usr/lib/emboss/newseq debian/emboss/usr/lib/emboss/redata debian/emboss/usr/lib/emboss/helixturnhelix debian/emboss/usr/lib/emboss/taxgetup debian/emboss/usr/lib/emboss/drfindid debian/emboss/usr/lib/emboss/drget debian/emboss/usr/lib/emboss/tfextract debian/emboss/usr/lib/emboss/aaindexextract debian/emboss/usr/lib/emboss/tmap debian/emboss/usr/lib/emboss/dbxuncompress debian/emboss/usr/lib/emboss/taxgetrank debian/emboss/usr/lib/emboss/edamhasoutput debian/emboss/usr/lib/emboss/featmerge debian/emboss/usr/lib/emboss/cons debian/emboss/usr/lib/emboss/seqxref debian/emboss/usr/lib/emboss/dotmatcher debian/emboss/usr/lib/emboss/dotpath debian/emboss/usr/lib/emboss/maskfeat debian/emboss/usr/lib/emboss/cutgextract debian/emboss/usr/lib/emboss/btwisted debian/emboss/usr/lib/emboss/tranalign debian/emboss/usr/lib/emboss/msbar debian/emboss/usr/lib/emboss/est2genome debian/emboss/usr/lib/emboss/einverted debian/emboss/usr/lib/emboss/jaspscan debian/emboss/usr/lib/emboss/taxgetspecies debian/emboss/usr/lib/emboss/edamhasinput debian/emboss/usr/lib/emboss/dbifasta debian/emboss/usr/lib/emboss/oddcomp debian/emboss/usr/lib/emboss/sizeseq debian/emboss/usr/lib/emboss/edamisid debian/emboss/usr/lib/emboss/trimspace debian/emboss/usr/lib/emboss/marscan debian/emboss/usr/lib/emboss/drfindformat debian/emboss/usr/lib/emboss/cutseq debian/emboss/usr/lib/emboss/cacheensembl debian/emboss/usr/lib/emboss/restover debian/emboss/usr/lib/emboss/backtranseq debian/emboss/usr/lib/emboss/acdc debian/emboss/usr/lib/emboss/makeprotseq debian/emboss/usr/lib/emboss/wossdata dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/emboss/usr/lib/emboss/isochore debian/emboss/usr/lib/emboss/dbxedam debian/emboss/usr/lib/emboss/acdtable debian/emboss/usr/lib/emboss/edamisformat debian/emboss/usr/lib/emboss/prophecy debian/emboss/usr/lib/emboss/sirna debian/emboss/usr/lib/emboss/dbxobo debian/emboss/usr/lib/emboss/dottup debian/emboss/usr/lib/emboss/newcpgseek debian/emboss/usr/lib/emboss/supermatcher debian/emboss/usr/lib/emboss/nohtml debian/emboss/usr/lib/emboss/sizeseq debian/emboss/usr/lib/emboss/needleall debian/emboss/usr/lib/emboss/makeprotseq debian/emboss/usr/lib/emboss/findkm debian/emboss/usr/lib/emboss/redata debian/emboss/usr/lib/emboss/transeq debian/emboss/usr/lib/emboss/seqretsplit debian/emboss/usr/lib/emboss/seqret debian/emboss/usr/lib/emboss/prophet debian/emboss/usr/lib/emboss/marscan debian/emboss/usr/lib/emboss/emma debian/emboss/usr/lib/emboss/acdpretty debian/emboss/usr/lib/emboss/recoder debian/emboss/usr/lib/emboss/helixturnhelix debian/emboss/usr/lib/emboss/aaindexextract debian/emboss/usr/lib/emboss/newseq debian/emboss/usr/lib/emboss/restrict debian/emboss/usr/lib/emboss/edamhasinput debian/emboss/usr/lib/emboss/pasteseq debian/emboss/usr/lib/emboss/listor debian/emboss/usr/lib/emboss/drfindid debian/emboss/usr/lib/emboss/infobase debian/emboss/usr/lib/emboss/fuzzpro debian/emboss/usr/lib/emboss/trimest debian/emboss/usr/lib/emboss/pepdigest debian/emboss/usr/lib/emboss/acdc debian/emboss/usr/lib/emboss/density debian/emboss/usr/lib/emboss/tfm debian/emboss/usr/lib/emboss/mwcontam debian/emboss/usr/lib/emboss/notseq debian/emboss/usr/lib/emboss/einverted debian/emboss/usr/lib/emboss/drget debian/emboss/usr/lib/emboss/cusp debian/emboss/usr/lib/emboss/descseq debian/emboss/usr/lib/emboss/eprimer32 debian/emboss/usr/lib/emboss/oddcomp debian/emboss/usr/lib/emboss/taxgetspecies debian/emboss/usr/lib/emboss/coderet debian/emboss/usr/lib/emboss/tfextract debian/emboss/usr/lib/emboss/syco debian/emboss/usr/lib/emboss/pscan debian/emboss/usr/lib/emboss/aligncopy debian/emboss/usr/lib/emboss/geecee debian/emboss/usr/lib/emboss/union debian/emboss/usr/lib/emboss/pepinfo debian/emboss/usr/lib/emboss/splitter debian/emboss/usr/lib/emboss/maskseq debian/emboss/usr/lib/emboss/showseq debian/emboss/usr/lib/emboss/edamname debian/emboss/usr/lib/emboss/drfinddata debian/emboss/usr/lib/emboss/mwfilter debian/emboss/usr/lib/emboss/tfscan debian/emboss/usr/lib/emboss/featreport debian/emboss/usr/lib/emboss/cacheebeyesearch debian/emboss/usr/lib/emboss/urlget debian/emboss/usr/lib/emboss/dbxresource debian/emboss/usr/lib/emboss/ontotext debian/emboss/usr/lib/emboss/nthseq debian/emboss/usr/lib/emboss/codcmp debian/emboss/usr/lib/emboss/jaspextract debian/emboss/usr/lib/emboss/sixpack debian/emboss/usr/lib/emboss/dan debian/emboss/usr/lib/emboss/inforesidue debian/emboss/usr/lib/emboss/variationget debian/emboss/usr/lib/emboss/megamerger debian/emboss/usr/lib/emboss/compseq debian/emboss/usr/lib/emboss/seqretsetall debian/emboss/usr/lib/emboss/refseqget debian/emboss/usr/lib/emboss/btwisted debian/emboss/usr/lib/emboss/dbiblast debian/emboss/usr/lib/emboss/servertell debian/emboss/usr/lib/emboss/banana debian/emboss/usr/lib/emboss/acdtrace debian/emboss/usr/lib/emboss/hmoment debian/emboss/usr/lib/emboss/fuzznuc debian/emboss/usr/lib/emboss/prettyplot debian/emboss/usr/lib/emboss/etandem debian/emboss/usr/lib/emboss/remap debian/emboss/usr/lib/emboss/drfindformat debian/emboss/usr/lib/emboss/cpgplot debian/emboss/usr/lib/emboss/wossoutput debian/emboss/usr/lib/emboss/printsextract debian/emboss/usr/lib/emboss/seqxref debian/emboss/usr/lib/emboss/embossdata debian/emboss/usr/lib/emboss/garnier debian/emboss/usr/lib/emboss/embossversion debian/emboss/usr/lib/emboss/est2genome debian/emboss/usr/lib/emboss/taxgetrank debian/emboss/usr/lib/emboss/revseq debian/emboss/usr/lib/emboss/skipseq debian/emboss/usr/lib/emboss/sigcleave debian/emboss/usr/lib/emboss/jaspscan debian/emboss/usr/lib/emboss/psiphi debian/emboss/usr/lib/emboss/showfeat debian/emboss/usr/lib/emboss/backtranambig debian/emboss/usr/lib/emboss/assemblyget debian/emboss/usr/lib/emboss/makenucseq debian/emboss/usr/lib/emboss/pepwheel debian/emboss/usr/lib/emboss/textsearch debian/emboss/usr/lib/emboss/showalign debian/emboss/usr/lib/emboss/maskambignuc debian/emboss/usr/lib/emboss/polydot debian/emboss/usr/lib/emboss/dbigcg debian/emboss/usr/lib/emboss/ontogetup debian/emboss/usr/lib/emboss/cachedbfetch debian/emboss/usr/lib/emboss/tranalign debian/emboss/usr/lib/emboss/extractfeat debian/emboss/usr/lib/emboss/vectorstrip debian/emboss/usr/lib/emboss/godef debian/emboss/usr/lib/emboss/cacheensembl debian/emboss/usr/lib/emboss/wordmatch debian/emboss/usr/lib/emboss/rebaseextract debian/emboss/usr/lib/emboss/backtranseq debian/emboss/usr/lib/emboss/xmlget debian/emboss/usr/lib/emboss/noreturn debian/emboss/usr/lib/emboss/maskfeat debian/emboss/usr/lib/emboss/preg debian/emboss/usr/lib/emboss/wobble debian/emboss/usr/lib/emboss/epestfind debian/emboss/usr/lib/emboss/equicktandem debian/emboss/usr/lib/emboss/biosed debian/emboss/usr/lib/emboss/patmatmotifs debian/emboss/usr/lib/emboss/notab debian/emboss/usr/lib/emboss/wordcount debian/emboss/usr/lib/emboss/cachedas debian/emboss/usr/lib/emboss/wossoperation debian/emboss/usr/lib/emboss/edamdef debian/emboss/usr/lib/emboss/distmat debian/emboss/usr/lib/emboss/drfindresource debian/emboss/usr/lib/emboss/pepstats debian/emboss/usr/lib/emboss/ontoisobsolete debian/emboss/usr/lib/emboss/cpgreport debian/emboss/usr/lib/emboss/emowse debian/emboss/usr/lib/emboss/wossname debian/emboss/usr/lib/emboss/merger debian/emboss/usr/lib/emboss/codcopy debian/emboss/usr/lib/emboss/charge debian/emboss/usr/lib/emboss/featmerge debian/emboss/usr/lib/emboss/needle debian/emboss/usr/lib/emboss/wossdata debian/emboss/usr/lib/emboss/entret debian/emboss/usr/lib/emboss/degapseq debian/emboss/usr/lib/emboss/aligncopypair debian/emboss/usr/lib/emboss/acdvalid debian/emboss/usr/lib/emboss/extractalign debian/emboss/usr/lib/emboss/profit debian/emboss/usr/lib/emboss/whichdb debian/emboss/usr/lib/emboss/prettyseq debian/emboss/usr/lib/emboss/seqcount debian/emboss/usr/lib/emboss/xmltext debian/emboss/usr/lib/emboss/checktrans debian/emboss/usr/lib/emboss/plotcon debian/emboss/usr/lib/emboss/pepnet debian/emboss/usr/lib/emboss/dbxgcg debian/emboss/usr/lib/emboss/extractseq debian/emboss/usr/lib/emboss/ontogetsibs debian/emboss/usr/lib/emboss/cons debian/emboss/usr/lib/emboss/restover debian/emboss/usr/lib/emboss/splitsource debian/emboss/usr/lib/emboss/feattext debian/emboss/usr/lib/emboss/lindna debian/emboss/usr/lib/emboss/abiview debian/emboss/usr/lib/emboss/skipredundant debian/emboss/usr/lib/emboss/wossinput debian/emboss/usr/lib/emboss/dotmatcher debian/emboss/usr/lib/emboss/seqmatchall debian/emboss/usr/lib/emboss/nthseqset debian/emboss/usr/lib/emboss/dreg debian/emboss/usr/lib/emboss/dbxuncompress debian/emboss/usr/lib/emboss/primersearch debian/emboss/usr/lib/emboss/taxget debian/emboss/usr/lib/emboss/prosextract debian/emboss/usr/lib/emboss/wossparam debian/emboss/usr/lib/emboss/iep debian/emboss/usr/lib/emboss/showpep debian/emboss/usr/lib/emboss/fuzztran debian/emboss/usr/lib/emboss/yank debian/emboss/usr/lib/emboss/showserver debian/emboss/usr/lib/emboss/water debian/emboss/usr/lib/emboss/getorf debian/emboss/usr/lib/emboss/drtext debian/emboss/usr/lib/emboss/showorf debian/emboss/usr/lib/emboss/ontogetcommon debian/emboss/usr/lib/emboss/cutseq debian/emboss/usr/lib/emboss/wosstopic debian/emboss/usr/lib/emboss/freak debian/emboss/usr/lib/emboss/ontogetroot debian/emboss/usr/lib/emboss/dbxstat debian/emboss/usr/lib/emboss/taxgetdown debian/emboss/usr/lib/emboss/newcpgreport debian/emboss/usr/lib/emboss/dotpath debian/emboss/usr/lib/emboss/cai debian/emboss/usr/lib/emboss/dbxtax debian/emboss/usr/lib/emboss/ontocount debian/emboss/usr/lib/emboss/maskambigprot debian/emboss/usr/lib/emboss/dbifasta debian/emboss/usr/lib/emboss/cutgextract debian/emboss/usr/lib/emboss/ontogetdown debian/emboss/usr/lib/emboss/trimseq debian/emboss/usr/lib/emboss/acdlog debian/emboss/usr/lib/emboss/dbxreport debian/emboss/usr/lib/emboss/pepwindow debian/emboss/usr/lib/emboss/tmap debian/emboss/usr/lib/emboss/matcher debian/emboss/usr/lib/emboss/infoseq debian/emboss/usr/lib/emboss/octanol debian/emboss/usr/lib/emboss/taxgetup debian/emboss/usr/lib/emboss/edialign debian/emboss/usr/lib/emboss/pepwindowall debian/emboss/usr/lib/emboss/infoalign debian/emboss/usr/lib/emboss/dbxcompress debian/emboss/usr/lib/emboss/eprimer3 debian/emboss/usr/lib/emboss/seealso debian/emboss/usr/lib/emboss/antigenic debian/emboss/usr/lib/emboss/shuffleseq debian/emboss/usr/lib/emboss/edamhasoutput debian/emboss/usr/lib/emboss/patmatdb debian/emboss/usr/lib/emboss/silent debian/emboss/usr/lib/emboss/chaos debian/emboss/usr/lib/emboss/stretcher debian/emboss/usr/lib/emboss/dbxfasta debian/emboss/usr/lib/emboss/dbiflat debian/emboss/usr/lib/emboss/ontogetobsolete debian/emboss/usr/lib/emboss/featcopy debian/emboss/usr/lib/emboss/acdgalaxy debian/emboss/usr/lib/emboss/seqxrefget debian/emboss/usr/lib/emboss/twofeat debian/emboss/usr/lib/emboss/palindrome debian/emboss/usr/lib/emboss/embossupdate debian/emboss/usr/lib/emboss/dbxflat debian/emboss/usr/lib/emboss/goname debian/emboss/usr/lib/emboss/dbtell debian/emboss/usr/lib/emboss/msbar debian/emboss/usr/lib/emboss/consambig debian/emboss/usr/lib/emboss/edamisid debian/emboss/usr/lib/emboss/textget debian/emboss/usr/lib/emboss/chips debian/emboss/usr/lib/emboss/stssearch debian/emboss/usr/lib/emboss/infoassembly debian/emboss/usr/lib/emboss/ontoget debian/emboss/usr/lib/emboss/tcode debian/emboss/usr/lib/emboss/cirdna debian/emboss/usr/lib/emboss/trimspace debian/emboss/usr/lib/emboss/nospace debian/emboss/usr/lib/emboss/diffseq debian/emboss/usr/lib/emboss/pepcoil debian/emboss/usr/lib/emboss/wordfinder debian/emboss/usr/lib/emboss/showdb debian/emboss/usr/lib/emboss/plotorf were not linked against libX11.so.6 (they use none of the library's symbols) dpkg-shlibdeps -Tdebian/emboss-lib.substvars debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libensembl.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so.3.2.7 debian/emboss-lib/usr/lib/emboss/lib/libajax.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so.6.0.5 debian/emboss-lib/usr/lib/emboss/lib/libepcre.so.7.0.9 debian/emboss-lib/usr/lib/emboss/lib/libacd.so.6.0.5 dpkg-shlibdeps: warning: debian/emboss-lib/usr/lib/emboss/lib/libensembl.so.6.0.5 contains an unresolvable reference to symbol ajNamSvrListListDatabases: it's probably a plugin dpkg-shlibdeps: warning: 198 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/emboss-lib/usr/lib/emboss/lib/libajaxdb.so.6.0.5 contains an unresolvable reference to symbol ajStrTrimStartC: it's probably a plugin dpkg-shlibdeps: warning: 302 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/emboss-lib/usr/lib/emboss/lib/libacd.so.6.0.5 contains an unresolvable reference to symbol ajMatrixNewFile: it's probably a plugin dpkg-shlibdeps: warning: 388 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/emboss-lib/usr/lib/emboss/lib/libeplplot.so.3.2.7 contains an unresolvable reference to symbol XCheckWindowEvent: it's probably a plugin dpkg-shlibdeps: warning: 48 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/emboss-lib/usr/lib/emboss/lib/libajaxg.so.6.0.5 contains an unresolvable reference to symbol ajMemFree: it's probably a plugin dpkg-shlibdeps: warning: 83 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/emboss-lib/usr/lib/emboss/lib/libajax.so.6.0.5 contains an unresolvable reference to symbol epcre_dfa_exec: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/emboss-lib/usr/lib/emboss/lib/libnucleus.so.6.0.5 contains an unresolvable reference to symbol ajStrDelStatic: it's probably a plugin dpkg-shlibdeps: warning: 406 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a find debian/emboss/etc -type f -printf '/etc/%P ' | LC_ALL=C sort >> debian/emboss/DEBIAN/conffiles rm -f debian/emboss/DEBIAN/conffiles install -p -m0644 debian/.debhelper/generated/emboss-lib/triggers debian/emboss-lib/DEBIAN/triggers dh_gencontrol -a echo misc:Depends= >> debian/emboss.substvars echo misc:Pre-Depends= >> debian/emboss.substvars dpkg-gencontrol -pemboss -ldebian/changelog -Tdebian/emboss.substvars -Pdebian/emboss dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe chmod 0644 -- debian/emboss/DEBIAN/control chown 0:0 -- debian/emboss/DEBIAN/control echo misc:Depends= >> debian/emboss-lib.substvars echo misc:Pre-Depends= >> debian/emboss-lib.substvars dpkg-gencontrol -pemboss-lib -ldebian/changelog -Tdebian/emboss-lib.substvars -Pdebian/emboss-lib dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe chmod 0644 -- debian/emboss-lib/DEBIAN/control chown 0:0 -- debian/emboss-lib/DEBIAN/control dh_gencontrol debug symbol wrapper: all non-arch-all packages for this build platform i386: emboss emboss-lib dh_gencontrol debug symbol wrapper: packages to act on: emboss emboss-lib dh_gencontrol debug symbol wrapper: ignored packages: dh_gencontrol debug symbol wrapper: processing package emboss (pkgdir debian/emboss, ddeb package dir debian/emboss-dbgsym) dh_gencontrol debug symbol wrapper: building emboss-dbgsym_6.6.0+dfsg-6_i386.ddeb dpkg-deb: building package 'emboss-dbgsym' in '../emboss-dbgsym_6.6.0+dfsg-6_i386.ddeb'. dh_gencontrol debug symbol wrapper: dpkg-distaddfile emboss-dbgsym_6.6.0+dfsg-6_i386.ddeb science extra dpkg-distaddfile: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_gencontrol debug symbol wrapper: processing package emboss-lib (pkgdir debian/emboss-lib, ddeb package dir debian/emboss-lib-dbgsym) dh_gencontrol debug symbol wrapper: building emboss-lib-dbgsym_6.6.0+dfsg-6_i386.ddeb dpkg-deb: building package 'emboss-lib-dbgsym' in '../emboss-lib-dbgsym_6.6.0+dfsg-6_i386.ddeb'. dh_gencontrol debug symbol wrapper: dpkg-distaddfile emboss-lib-dbgsym_6.6.0+dfsg-6_i386.ddeb science extra dpkg-distaddfile: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_md5sums -a (cd debian/emboss >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/emboss/DEBIAN/md5sums chown 0:0 -- debian/emboss/DEBIAN/md5sums (cd debian/emboss-lib >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null chmod 0644 -- debian/emboss-lib/DEBIAN/md5sums chown 0:0 -- debian/emboss-lib/DEBIAN/md5sums rm -f debian/*.debhelper.log debian/rules override_dh_builddeb make[1]: Entering directory '/<>/emboss-6.6.0+dfsg' dh_builddeb -- -Z xz dpkg-deb -Z xz --build debian/emboss .. dpkg-deb -Z xz --build debian/emboss-lib .. INFO: pkgstriptranslations version 131 INFO: pkgstriptranslations version 131 pkgstriptranslations: processing emboss-lib (in debian/emboss-lib); do_strip: , oemstrip: pkgstriptranslations: processing emboss (in debian/emboss); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/emboss/DEBIAN/control, package emboss, directory debian/emboss .. removing usr/share/doc/emboss/changelog.gz Searching for duplicated docs in dependency emboss-lib... symlinking changelog.Debian.gz in emboss to file in emboss-lib pkgstripfiles: Running PNG optimization (using 4 cpus) for package emboss ... pkgstripfiles: No PNG files. dpkg-deb: building package 'emboss' in '../emboss_6.6.0+dfsg-6_i386.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/emboss-lib/DEBIAN/control, package emboss-lib, directory debian/emboss-lib .. removing usr/share/doc/emboss-lib/changelog.gz pkgstripfiles: Truncating usr/share/doc/emboss-lib/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package emboss-lib ... pkgstripfiles: No PNG files. dpkg-deb: building package 'emboss-lib' in '../emboss-lib_6.6.0+dfsg-6_i386.deb'. make[1]: Leaving directory '/<>/emboss-6.6.0+dfsg' dpkg-genchanges --build=any -mLaunchpad Build Daemon >../emboss_6.6.0+dfsg-6_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build emboss-6.6.0+dfsg dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20161203-1736 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ emboss_6.6.0+dfsg-6_i386.changes: --------------------------------- Format: 1.8 Date: Sat, 03 Dec 2016 08:40:10 +0100 Source: emboss Binary: emboss emboss-data emboss-doc emboss-test emboss-lib jemboss Architecture: i386 Version: 6.6.0+dfsg-6 Distribution: zesty-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: emboss - European molecular biology open software suite emboss-data - data files for the EMBOSS package emboss-doc - documentation for EMBOSS emboss-lib - EMBOSS Libraries emboss-test - test files for the EMBOSS package jemboss - graphical user interface to EMBOSS Closes: 845838 Changes: emboss (6.6.0+dfsg-6) unstable; urgency=medium . * debhelper 10 * d/watch: version=4 * Build-Depends: default-libmysqlclient-dev Closes: #845838 Checksums-Sha1: 77bd1d619b7d662e738c1d2281824df713f9439e 1116562 emboss-dbgsym_6.6.0+dfsg-6_i386.ddeb 033f656a3764ba4a6e4ebe6918d71f5b03743b73 2169194 emboss-lib-dbgsym_6.6.0+dfsg-6_i386.ddeb d6aac4f31993f84435f703d28d4f3f853cebdff5 2868150 emboss-lib_6.6.0+dfsg-6_i386.deb 726b88d3a30fd88b39e6d6d083d6fb9ba1415dc3 980714 emboss_6.6.0+dfsg-6_i386.deb Checksums-Sha256: a58788e88b2b10e64c75db6a7b74138b699ebb53ea2657c40b2012b91d2713de 1116562 emboss-dbgsym_6.6.0+dfsg-6_i386.ddeb d36a2ffe8bfd7eb04af874d0d8c92fbeacd38246489431c625d8f36c0684c4ac 2169194 emboss-lib-dbgsym_6.6.0+dfsg-6_i386.ddeb 901e0c24be7160ec7efa8f61a18ad5eeba99895371380dda4420b434d0c929c2 2868150 emboss-lib_6.6.0+dfsg-6_i386.deb 6fa576c5359bd09b6e75edc1529fde7a4265c3d15ed28d13901f02ffa2f9a211 980714 emboss_6.6.0+dfsg-6_i386.deb Files: 3845a0b3b3e246d0fdcb48944320b649 1116562 science extra emboss-dbgsym_6.6.0+dfsg-6_i386.ddeb 60b53b3b304ab40a58a9bee8ad8a7beb 2169194 science extra emboss-lib-dbgsym_6.6.0+dfsg-6_i386.ddeb e497b0ead9d35e6727a58412e40e99cb 2868150 science optional emboss-lib_6.6.0+dfsg-6_i386.deb 2c8736eb613f1471eb38f5e7f9000494 980714 science optional emboss_6.6.0+dfsg-6_i386.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ emboss-lib_6.6.0+dfsg-6_i386.deb -------------------------------- new debian package, version 2.0. size 2868150 bytes: control archive=7886 bytes. 1431 bytes, 30 lines control 17760 bytes, 255 lines md5sums 180 bytes, 8 lines shlibs 60 bytes, 2 lines triggers Package: emboss-lib Source: emboss Version: 6.6.0+dfsg-6 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 15649 Depends: libc6 (>= 2.11), libexpat1 (>= 2.0.1), libgd3 (>= 2.1.0~alpha~), libhpdf-2.2.1, libmysqlclient20 (>= 5.7.11), libpq5, zlib1g (>= 1:1.1.4) Conflicts: libajax6, libajax6-dev, libnucleus6, libnucleus6-dev Replaces: libajax6, libajax6-dev, libnucleus6, libnucleus6-dev Section: science Priority: optional Homepage: http://emboss.sourceforge.net Description: EMBOSS Libraries This package contains the core libraries of the European Molecular Biology Open Software Suite, EMBOSS. . AJAX covers standard data structures, including strings, sequences, file handles, queues, hashes, heaps, lists, dictionaries, trees and dynamic arrays. It also covers standard algorithms including comparisons, pattern matching, sorting, and iterators. AJAX will also provide a set of high level graphics functions suited to the needs of sequence analysis applications. . The NUCLEUS library provides higher-level functions specific to molecular sequence analysis, including sequence comparisons, translation, codon usage and annotation. . It also contains a eplplot, an EMBOSS, a fork of the plplot library. . 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lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/share/doc/emboss-lib/ChangeLog.gz -> changelog.gz -rw-r--r-- root/root 2206 2016-12-03 07:40 ./usr/share/doc/emboss-lib/changelog.Debian.gz -rw-r--r-- root/root 34101 2016-12-03 07:40 ./usr/share/doc/emboss-lib/copyright drwxr-xr-x root/root 0 2016-12-03 07:40 ./usr/share/lintian/ drwxr-xr-x root/root 0 2016-12-03 07:40 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 553 2016-12-03 07:40 ./usr/share/lintian/overrides/emboss-lib emboss_6.6.0+dfsg-6_i386.deb ---------------------------- new debian package, version 2.0. size 980714 bytes: control archive=16418 bytes. 1240 bytes, 22 lines control 37390 bytes, 586 lines md5sums Package: emboss Version: 6.6.0+dfsg-6 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 4130 Depends: emboss-lib (= 6.6.0+dfsg-6), libc6 (>= 2.15), libexpat1 (>= 2.0.1), libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.6.0+dfsg-6) Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Section: science Priority: optional Homepage: http://emboss.sourceforge.net Description: European molecular biology open software suite EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages. drwxr-xr-x root/root 0 2016-12-03 07:40 ./ drwxr-xr-x root/root 0 2016-12-03 07:40 ./etc/ drwxr-xr-x root/root 0 2016-12-03 07:40 ./etc/emboss/ drwxr-xr-x root/root 0 2016-12-03 07:40 ./etc/emboss/embossrc.d/ drwxr-xr-x root/root 0 2016-12-03 07:40 ./usr/ drwxr-xr-x root/root 0 2016-12-03 07:40 ./usr/bin/ lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/aaindexextract -> ../lib/emboss/aaindexextract lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/abiview -> ../lib/emboss/abiview lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/acdc -> ../lib/emboss/acdc lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/acdgalaxy -> ../lib/emboss/acdgalaxy lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/acdlog -> ../lib/emboss/acdlog lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/acdpretty -> ../lib/emboss/acdpretty lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/acdtable -> ../lib/emboss/acdtable lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/acdtrace -> ../lib/emboss/acdtrace lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/acdvalid -> ../lib/emboss/acdvalid lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/aligncopy -> ../lib/emboss/aligncopy lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/aligncopypair -> ../lib/emboss/aligncopypair lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/antigenic -> ../lib/emboss/antigenic lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/assemblyget -> ../lib/emboss/assemblyget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/backtranambig -> ../lib/emboss/backtranambig lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/backtranseq -> ../lib/emboss/backtranseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/banana -> ../lib/emboss/banana lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/biosed -> ../lib/emboss/biosed lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/btwisted -> ../lib/emboss/btwisted lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cachedas -> ../lib/emboss/cachedas lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cachedbfetch -> ../lib/emboss/cachedbfetch lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cacheebeyesearch -> ../lib/emboss/cacheebeyesearch lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cacheensembl -> ../lib/emboss/cacheensembl lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cai -> ../lib/emboss/cai lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/chaos -> ../lib/emboss/chaos lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/charge -> ../lib/emboss/charge lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/checktrans -> ../lib/emboss/checktrans lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/chips -> ../lib/emboss/chips lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cirdna -> ../lib/emboss/cirdna lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/codcmp -> ../lib/emboss/codcmp lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/codcopy -> ../lib/emboss/codcopy lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/coderet -> ../lib/emboss/coderet lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/compseq -> ../lib/emboss/compseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/consambig -> ../lib/emboss/consambig lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cpgplot -> ../lib/emboss/cpgplot lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cpgreport -> ../lib/emboss/cpgreport lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cusp -> ../lib/emboss/cusp lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cutgextract -> ../lib/emboss/cutgextract lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/cutseq -> ../lib/emboss/cutseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dan -> ../lib/emboss/dan lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbiblast -> ../lib/emboss/dbiblast lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbifasta -> ../lib/emboss/dbifasta lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbiflat -> ../lib/emboss/dbiflat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbigcg -> ../lib/emboss/dbigcg lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbtell -> ../lib/emboss/dbtell lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxcompress -> ../lib/emboss/dbxcompress lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxedam -> ../lib/emboss/dbxedam lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxfasta -> ../lib/emboss/dbxfasta lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxflat -> ../lib/emboss/dbxflat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxgcg -> ../lib/emboss/dbxgcg lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxobo -> ../lib/emboss/dbxobo lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxreport -> ../lib/emboss/dbxreport lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxresource -> ../lib/emboss/dbxresource lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxstat -> ../lib/emboss/dbxstat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxtax -> ../lib/emboss/dbxtax lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dbxuncompress -> ../lib/emboss/dbxuncompress lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/degapseq -> ../lib/emboss/degapseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/density -> ../lib/emboss/density lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/descseq -> ../lib/emboss/descseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/diffseq -> ../lib/emboss/diffseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/distmat -> ../lib/emboss/distmat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dotmatcher -> ../lib/emboss/dotmatcher lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dotpath -> ../lib/emboss/dotpath lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dottup -> ../lib/emboss/dottup lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/dreg -> ../lib/emboss/dreg lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/drfinddata -> ../lib/emboss/drfinddata lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/drfindformat -> ../lib/emboss/drfindformat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/drfindid -> ../lib/emboss/drfindid lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/drfindresource -> ../lib/emboss/drfindresource lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/drget -> ../lib/emboss/drget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/drtext -> ../lib/emboss/drtext lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/edamdef -> ../lib/emboss/edamdef lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/edamhasinput -> ../lib/emboss/edamhasinput lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/edamhasoutput -> ../lib/emboss/edamhasoutput lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/edamisformat -> ../lib/emboss/edamisformat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/edamisid -> ../lib/emboss/edamisid lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/edamname -> ../lib/emboss/edamname lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/edialign -> ../lib/emboss/edialign lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/einverted -> ../lib/emboss/einverted lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/em_cons -> ../lib/emboss/cons lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/em_pscan -> ../lib/emboss/pscan lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/embossdata -> ../lib/emboss/embossdata lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/embossupdate -> ../lib/emboss/embossupdate lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/embossversion -> ../lib/emboss/embossversion lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/emma -> ../lib/emboss/emma lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/emowse -> ../lib/emboss/emowse lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/entret -> ../lib/emboss/entret lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/epestfind -> ../lib/emboss/epestfind lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/eprimer3 -> ../lib/emboss/eprimer3 lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/eprimer32 -> ../lib/emboss/eprimer32 lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/equicktandem -> ../lib/emboss/equicktandem lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/est2genome -> ../lib/emboss/est2genome lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/etandem -> ../lib/emboss/etandem lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/extractalign -> ../lib/emboss/extractalign lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/extractfeat -> ../lib/emboss/extractfeat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/extractseq -> ../lib/emboss/extractseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/featcopy -> ../lib/emboss/featcopy lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/featmerge -> ../lib/emboss/featmerge lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/featreport -> ../lib/emboss/featreport lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/feattext -> ../lib/emboss/feattext lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/findkm -> ../lib/emboss/findkm lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/freak -> ../lib/emboss/freak lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/fuzznuc -> ../lib/emboss/fuzznuc lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/fuzzpro -> ../lib/emboss/fuzzpro lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/fuzztran -> ../lib/emboss/fuzztran lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/garnier -> ../lib/emboss/garnier lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/geecee -> ../lib/emboss/geecee lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/getorf -> ../lib/emboss/getorf lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/godef -> ../lib/emboss/godef lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/goname -> ../lib/emboss/goname lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/helixturnhelix -> ../lib/emboss/helixturnhelix lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/hmoment -> ../lib/emboss/hmoment lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/iep -> ../lib/emboss/iep lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/infoalign -> ../lib/emboss/infoalign lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/infoassembly -> ../lib/emboss/infoassembly lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/infobase -> ../lib/emboss/infobase lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/inforesidue -> ../lib/emboss/inforesidue lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/infoseq -> ../lib/emboss/infoseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/isochore -> ../lib/emboss/isochore lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/jaspextract -> ../lib/emboss/jaspextract lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/jaspscan -> ../lib/emboss/jaspscan lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/jembossctl -> ../lib/emboss/jembossctl lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/lindna -> ../lib/emboss/lindna lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/listor -> ../lib/emboss/listor lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/makenucseq -> ../lib/emboss/makenucseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/makeprotseq -> ../lib/emboss/makeprotseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/marscan -> ../lib/emboss/marscan lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/maskambignuc -> ../lib/emboss/maskambignuc lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/maskambigprot -> ../lib/emboss/maskambigprot lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/maskfeat -> ../lib/emboss/maskfeat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/maskseq -> ../lib/emboss/maskseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/matcher -> ../lib/emboss/matcher lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/megamerger -> ../lib/emboss/megamerger lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/merger -> ../lib/emboss/merger lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/msbar -> ../lib/emboss/msbar lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/mwcontam -> ../lib/emboss/mwcontam lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/mwfilter -> ../lib/emboss/mwfilter lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/needle -> ../lib/emboss/needle lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/needleall -> ../lib/emboss/needleall lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/newcpgreport -> ../lib/emboss/newcpgreport lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/newcpgseek -> ../lib/emboss/newcpgseek lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/newseq -> ../lib/emboss/newseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/nohtml -> ../lib/emboss/nohtml lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/noreturn -> ../lib/emboss/noreturn lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/nospace -> ../lib/emboss/nospace lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/notab -> ../lib/emboss/notab lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/notseq -> ../lib/emboss/notseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/nthseq -> ../lib/emboss/nthseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/nthseqset -> ../lib/emboss/nthseqset lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/octanol -> ../lib/emboss/octanol lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/oddcomp -> ../lib/emboss/oddcomp lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontocount -> ../lib/emboss/ontocount lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontoget -> ../lib/emboss/ontoget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontogetcommon -> ../lib/emboss/ontogetcommon lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontogetdown -> ../lib/emboss/ontogetdown lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontogetobsolete -> ../lib/emboss/ontogetobsolete lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontogetroot -> ../lib/emboss/ontogetroot lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontogetsibs -> ../lib/emboss/ontogetsibs lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontogetup -> ../lib/emboss/ontogetup lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontoisobsolete -> ../lib/emboss/ontoisobsolete lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/ontotext -> ../lib/emboss/ontotext lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/palindrome -> ../lib/emboss/palindrome lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/pasteseq -> ../lib/emboss/pasteseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/patmatdb -> ../lib/emboss/patmatdb lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/patmatmotifs -> ../lib/emboss/patmatmotifs lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/pepcoil -> ../lib/emboss/pepcoil lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/pepdigest -> ../lib/emboss/pepdigest lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/pepinfo -> ../lib/emboss/pepinfo lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/pepnet -> ../lib/emboss/pepnet lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/pepstats -> ../lib/emboss/pepstats lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/pepwheel -> ../lib/emboss/pepwheel lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/pepwindow -> ../lib/emboss/pepwindow lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/pepwindowall -> ../lib/emboss/pepwindowall lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/plotcon -> ../lib/emboss/plotcon lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/plotorf -> ../lib/emboss/plotorf lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/polydot -> ../lib/emboss/polydot lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/preg -> ../lib/emboss/preg lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/prettyplot -> ../lib/emboss/prettyplot lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/prettyseq -> ../lib/emboss/prettyseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/primersearch -> ../lib/emboss/primersearch lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/printsextract -> ../lib/emboss/printsextract lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/profit -> ../lib/emboss/profit lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/prophecy -> ../lib/emboss/prophecy lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/prophet -> ../lib/emboss/prophet lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/prosextract -> ../lib/emboss/prosextract lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/psiphi -> ../lib/emboss/psiphi lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/rebaseextract -> ../lib/emboss/rebaseextract lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/recoder -> ../lib/emboss/recoder lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/redata -> ../lib/emboss/redata lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/refseqget -> ../lib/emboss/refseqget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/remap -> ../lib/emboss/remap lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/restover -> ../lib/emboss/restover lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/restrict -> ../lib/emboss/restrict lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/revseq -> ../lib/emboss/revseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/seealso -> ../lib/emboss/seealso lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/seqcount -> ../lib/emboss/seqcount lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/seqmatchall -> ../lib/emboss/seqmatchall lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/seqret -> ../lib/emboss/seqret lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/seqretsetall -> ../lib/emboss/seqretsetall lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/seqretsplit -> ../lib/emboss/seqretsplit lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/seqxref -> ../lib/emboss/seqxref lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/seqxrefget -> ../lib/emboss/seqxrefget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/servertell -> ../lib/emboss/servertell lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/showalign -> ../lib/emboss/showalign lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/showdb -> ../lib/emboss/showdb lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/showfeat -> ../lib/emboss/showfeat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/showorf -> ../lib/emboss/showorf lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/showpep -> ../lib/emboss/showpep lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/showseq -> ../lib/emboss/showseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/showserver -> ../lib/emboss/showserver lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/shuffleseq -> ../lib/emboss/shuffleseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/sigcleave -> ../lib/emboss/sigcleave lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/silent -> ../lib/emboss/silent lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/sirna -> ../lib/emboss/sirna lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/sixpack -> ../lib/emboss/sixpack lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/sizeseq -> ../lib/emboss/sizeseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/skipredundant -> ../lib/emboss/skipredundant lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/skipseq -> ../lib/emboss/skipseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/splitsource -> ../lib/emboss/splitsource lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/splitter -> ../lib/emboss/splitter lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/stretcher -> ../lib/emboss/stretcher lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/stssearch -> ../lib/emboss/stssearch lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/supermatcher -> ../lib/emboss/supermatcher lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/syco -> ../lib/emboss/syco lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/taxget -> ../lib/emboss/taxget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/taxgetdown -> ../lib/emboss/taxgetdown lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/taxgetrank -> ../lib/emboss/taxgetrank lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/taxgetspecies -> ../lib/emboss/taxgetspecies lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/taxgetup -> ../lib/emboss/taxgetup lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/tcode -> ../lib/emboss/tcode lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/textget -> ../lib/emboss/textget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/textsearch -> ../lib/emboss/textsearch lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/tfextract -> ../lib/emboss/tfextract lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/tfm -> ../lib/emboss/tfm lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/tfscan -> ../lib/emboss/tfscan lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/tmap -> ../lib/emboss/tmap lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/tranalign -> ../lib/emboss/tranalign lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/transeq -> ../lib/emboss/transeq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/trimest -> ../lib/emboss/trimest lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/trimseq -> ../lib/emboss/trimseq lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/trimspace -> ../lib/emboss/trimspace lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/twofeat -> ../lib/emboss/twofeat lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/union -> ../lib/emboss/union lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/urlget -> ../lib/emboss/urlget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/variationget -> ../lib/emboss/variationget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/vectorstrip -> ../lib/emboss/vectorstrip lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/water -> ../lib/emboss/water lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/whichdb -> ../lib/emboss/whichdb lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wobble -> ../lib/emboss/wobble lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wordcount -> ../lib/emboss/wordcount lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wordfinder -> ../lib/emboss/wordfinder lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wordmatch -> ../lib/emboss/wordmatch lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wossdata -> ../lib/emboss/wossdata lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wossinput -> ../lib/emboss/wossinput lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wossname -> ../lib/emboss/wossname lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wossoperation -> ../lib/emboss/wossoperation lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wossoutput -> ../lib/emboss/wossoutput lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wossparam -> ../lib/emboss/wossparam lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/wosstopic -> ../lib/emboss/wosstopic lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/xmlget -> ../lib/emboss/xmlget lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/xmltext -> ../lib/emboss/xmltext lrwxrwxrwx root/root 0 2016-12-03 07:40 ./usr/bin/yank -> ../lib/emboss/yank drwxr-xr-x root/root 0 2016-12-03 07:40 ./usr/lib/ drwxr-xr-x root/root 0 2016-12-03 07:40 ./usr/lib/emboss/ -rwxr-xr-x root/root 9576 2016-12-03 07:40 ./usr/lib/emboss/aaindexextract 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2016-12-03 07:40 ./usr/share/man/man1/yank.1e.gz drwxr-xr-x root/root 0 2016-12-03 07:40 ./usr/share/mime/ drwxr-xr-x root/root 0 2016-12-03 07:40 ./usr/share/mime/packages/ -rw-r--r-- root/root 1053 2016-12-03 07:40 ./usr/share/mime/packages/emboss.xml +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Not removing build depends: as requested Keeping session: +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: i386 Build-Space: 1214548 Build-Time: 852 Distribution: zesty-proposed Host Architecture: i386 Install-Time: 177 Job: emboss_6.6.0+dfsg-6.dsc Machine Architecture: amd64 Package: emboss Package-Time: 1075 Source-Version: 6.6.0+dfsg-6 Space: 1214548 Status: successful Version: 6.6.0+dfsg-6 -------------------------------------------------------------------------------- Finished at 20161203-1736 Build needed 00:17:55, 1214548k disc space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-11514586'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-11514586/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-11514586'] Unmounting chroot for build PACKAGEBUILD-11514586... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-11514586'] Removing build PACKAGEBUILD-11514586