Ubuntu
e-mem package

e-mem 1.0.1-1 source package in Ubuntu

Changelog

e-mem (1.0.1-1) unstable; urgency=medium

  * New upstream version
  * Standards-Version: 4.1.3
  * debhelper 11

 -- Andreas Tille <email address hidden>  Thu, 15 Feb 2018 16:45:11 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Bionic release universe misc

Downloads

File Size SHA-256 Checksum
e-mem_1.0.1-1.dsc 1.9 KiB bc8a3b17e0128fcf9d68e66bdadf9971f0348eed2eee078a11aade46cdeafb84
e-mem_1.0.1.orig.tar.gz 33.0 KiB 70a5a1e8b4e190d117b8629fff3493a4762708c8c0fe9eae84da918136ceafea
e-mem_1.0.1-1.debian.tar.xz 4.7 KiB 52a54e0934999b64206bad1e11f62f4aafc1f53c6691bdbab3bf152801d68f21

Available diffs

No changes file available.

Binary packages built by this source

e-mem: Efficient computation of Maximal Exact Matches for very large genomes

 E-MEM enables efficient computation of Maximal Exact Matches (MEMs) that
 does not use full text indexes. The algorithm uses much less space and
 is highly amenable to parallelization. It can compute all MEMs of
 minimum length 100 between the whole human and mouse genomes on a 12
 core machine in 10 min and 2 GB of memory; the required memory can be as
 low as 600 MB. It can run efficiently genomes of any size. Extensive
 testing and comparison with currently best algorithms is provided.
 .
 Mummer has many different scripts where one of the key program is MEM
 computation. In all the scripts, the MEM computation program can be
 replaced with e-mem with ease for better performance.

e-mem-dbgsym: debug symbols for e-mem