discosnp 1:2.6.2-1 source package in Ubuntu
Changelog
discosnp (1:2.6.2-1) unstable; urgency=medium [ Étienne Mollier ] * Adjust use_debian_packaged_gatb-core.patch to not include GatbCore [ Andreas Tille ] * New upstream version -- Andreas Tille <email address hidden> Thu, 17 Feb 2022 16:58:46 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Jammy | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| discosnp_2.6.2-1.dsc | 2.1 KiB | 73ffeb50a36b5ce94efd0c16349ee2836055ef860704e91c12d0af16d8784bb8 |
| discosnp_2.6.2.orig.tar.gz | 1.3 MiB | 06c3683b2aaa665daf43254b4d97a7d0516dcea1c551a72e17669f2d52ad1fd6 |
| discosnp_2.6.2-1.debian.tar.xz | 21.7 KiB | fd38bd2d941064a79d1268e0267487342e6c2932190c71d550e86b10bbc18562 |
Available diffs
- diff from 1:2.6.1-1 to 1:2.6.2-1 (1.3 KiB)
No changes file available.
Binary packages built by this source
- discosnp: discovering Single Nucleotide Polymorphism from raw set(s) of reads
Software discoSnp is designed for discovering Single Nucleotide
Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation
Sequencers (NGS).
.
Note that number of input read sets is not constrained, it can be one, two,
or more. Note also that no other data as reference genome or annotations
are needed.
.
The software is composed by two modules. First module, kissnp2, detects SNPs
from read sets. A second module, kissreads, enhance the kissnp2 results by
computing per read set and for each found SNP:
.
1) its mean read coverage
2) the (phred) quality of reads generating the polymorphism.
.
This program is superseded by DiscoSnp++.
- discosnp-dbgsym: debug symbols for discosnp
