Ubuntu
discosnp package

discosnp 1.0.1-3 source package in Ubuntu

Changelog

discosnp (1.0.1-3) unstable; urgency=low


  * d/rules: FTBS fix help2man command

 -- Olivier Sallou <email address hidden>  Thu, 06 Feb 2014 09:10:12 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Low Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Trusty release universe misc

Downloads

File Size SHA-256 Checksum
discosnp_1.0.1-3.dsc 1.9 KiB 31dd6d58b9d16c7726c2c6e0b92df70751216040084371eeabf12c189e721c91
discosnp_1.0.1.orig.tar.xz 452.9 KiB 78c18053b5d9f67ed7b2fe0661da8c3526e857386d63fc9449800cc53b71c7ec
discosnp_1.0.1-3.debian.tar.xz 10.9 KiB 5b6484d4e7c9c57fba07e88c9bd133381af0e41f8c19905f6fc7fa4bd29be6d2

Available diffs

No changes file available.

Binary packages built by this source

discosnp: discovering Single Nucleotide Polymorphism from raw set(s) of reads

 Software discoSnp is designed for discovering Single Nucleotide
 Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation
 Sequencers (NGS).
 .
 Note that number of input read sets is not constrained, it can be one, two,
 or more. Note also that no other data as reference genome or annotations
 are needed.
 .
 The software is composed by two modules. First module, kissnp2, detects SNPs
 from read sets. A second module, kissreads, enhance the kissnp2 results by
 computing per read set and for each found SNP:
 1) its mean read coverage
 2) the (phred) quality of reads generating the polymorphism.