discosnp 1.0.1-3 source package in Ubuntu
Changelog
discosnp (1.0.1-3) unstable; urgency=low * d/rules: FTBS fix help2man command -- Olivier Sallou <email address hidden> Thu, 06 Feb 2014 09:10:12 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Low Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Trusty | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
discosnp_1.0.1-3.dsc | 1.9 KiB | 31dd6d58b9d16c7726c2c6e0b92df70751216040084371eeabf12c189e721c91 |
discosnp_1.0.1.orig.tar.xz | 452.9 KiB | 78c18053b5d9f67ed7b2fe0661da8c3526e857386d63fc9449800cc53b71c7ec |
discosnp_1.0.1-3.debian.tar.xz | 10.9 KiB | 5b6484d4e7c9c57fba07e88c9bd133381af0e41f8c19905f6fc7fa4bd29be6d2 |
Available diffs
- diff from 1.0.1-2 to 1.0.1-3 (653 bytes)
No changes file available.
Binary packages built by this source
- discosnp: discovering Single Nucleotide Polymorphism from raw set(s) of reads
Software discoSnp is designed for discovering Single Nucleotide
Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation
Sequencers (NGS).
.
Note that number of input read sets is not constrained, it can be one, two,
or more. Note also that no other data as reference genome or annotations
are needed.
.
The software is composed by two modules. First module, kissnp2, detects SNPs
from read sets. A second module, kissreads, enhance the kissnp2 results by
computing per read set and for each found SNP:
1) its mean read coverage
2) the (phred) quality of reads generating the polymorphism.