debian-med 3.7.2 source package in Ubuntu
Changelog
debian-med (3.7.2) unstable; urgency=medium
* opensurgsim is removed from Debian
* substitute r-cran-gprofiler by r-cran-gprofiler2 (see #994212)
* start of automatic changelog entry *
* Changes in metapackage dependencies
-med-bio
added:
Recommends: megan-ce, twopaco, lamassemble, ntcard, snpsift, mcaller,
dnarrange, megadepth, r-bioc-megadepth, provean,
libpwiz-tools, rockhopper, diann
Suggests: r-cran-gprofiler2
removed:
Suggests: mcaller, r-cran-gprofiler
-med-bio-dev
added:
Recommends: libpwiz-dev, python3-cogent3, r-cran-gprofiler2
removed:
Recommends: r-cran-gprofiler
Suggests: python3-cogent3, python3-mcaller
-med-covid-19
added:
Recommends: nf-core-artic
removed:
Recommends: artic
-med-epi
added:
Recommends: r-cran-prevalence
-med-imaging
removed:
Recommends: python3-mvpa2
-med-imaging-dev
added:
Recommends: libopencv-dev, python3-torchvision
removed:
Recommends: python3-mvpa2, pytorch-vision, libopensurgsim-dev, libcv-dev
-- Andreas Tille <email address hidden> Fri, 03 Jun 2022 12:04:09 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| debian-med_3.7.2.dsc | 2.9 KiB | 9f42a0c317877b234f5c140c27b10302e19bc6b801ae27077bc3e40b8ad473b6 |
| debian-med_3.7.2.tar.xz | 121.8 KiB | 1f1b33678f7f98a2d0c9d58bf20cbb07354d4545c17d293144ab375602dcfce0 |
Available diffs
- diff from 3.7.1 to 3.7.2 (15.6 KiB)
No changes file available.
Binary packages built by this source
- med-all: Default selection of tasks for Debian Med
This package is part of the Debian Med Pure Blend and installs all
tasks for a default installation of this blend.
- med-bio: Debian Med bioinformatics packages
This metapackage will install Debian packages for use in molecular biology,
structural biology and other biological sciences.
- med-bio-dev: Debian Med packages for development of bioinformatics applications
This metapackage will install Debian packages which might be helpful
for development of applications for biological research.
- med-cloud: Debian Med bioinformatics applications usable in cloud computing
This metapackage will install Debian packages related to molecular biology,
structural biology and bioinformatics for use in life sciences, that do not
depend on graphical toolkits and therefore can fit on system images for use
in cloud computing clusters, where space can be limited.
- med-config: No summary available for med-config in ubuntu kinetic.
No description available for med-config in ubuntu kinetic.
- med-data: Debian Med drug databases
This metapackage will install free drug databases and related
applications. The database can be accessed by any EMR using
the application.
- med-dental: No summary available for med-dental in ubuntu kinetic.
No description available for med-dental in ubuntu kinetic.
- med-epi: No summary available for med-epi in ubuntu kinetic.
No description available for med-epi in ubuntu kinetic.
- med-his: Debian Med suggestions for Hospital Information Systems
This metapackage contains dependencies for software and that could
be useful ro run a Hospital Information System. While there is
continuous work going on to package a ready to install system currently
only preconditions are finished but hopefully helpful in hospitals
anyway.
- med-imaging: Debian Med image processing and visualization packages
This metapackage will install Debian packages which might be useful in
medical image processing and visualization.
.
On one hand, it installs several packages supporting various image file
formats and image management, like DICOM (Digital Imaging and
Communications in Medicine) which is the de-facto standard for medical
image management, and NIFTI. On the other hand, it provides a variety of
software packages that can be used for visualization and for image processing
- either from a graphical user interface, the command line, or implemented in
workflows.
- med-imaging-dev: No summary available for med-imaging-dev in ubuntu kinetic.
No description available for med-imaging-dev in ubuntu kinetic.
- med-laboratory: Debian Med suggestions for medical laboratories
This metapackage contains dependencies for software and that could
be useful ro run a medical laboratory.
- med-oncology: No summary available for med-oncology in ubuntu kinetic.
No description available for med-oncology in ubuntu kinetic.
- med-pharmacy: No summary available for med-pharmacy in ubuntu kinetic.
No description available for med-pharmacy in ubuntu kinetic.
- med-physics: Debian Med packages for medical physicists
This metapackage contains dependencies for a
collection of software and documentation which is useful for
medical physicists in radiation oncology, diagnostics imaging
and related fields.
- med-practice: Debian Med packages for practice management
This metapackage contains dependencies for a collection of software
which might be helpful for practitioners to manage their practice.
- med-psychology: No summary available for med-psychology in ubuntu kinetic.
No description available for med-psychology in ubuntu kinetic.
- med-research: Debian Med packages for medical research
This metapackage will install tools that are useful for
medical research.
- med-statistics: No summary available for med-statistics in ubuntu kinetic.
No description available for med-statistics in ubuntu kinetic.
- med-tasks: Debian Med tasks for tasksel
This package provides Debian Med tasks in tasksel.
.
These tasks are described in detail at
https://blends. debian. org/med/ tasks/
- med-tools: Debian Med several tools
This metapackage will install tools for several purposes in health care.
Currently it contains some simple programs for Personal Health.
- med-typesetting: Debian Med support for typesetting and publishing
This metapackage will install Debian packages that might be helpful
for typesetting and publishing in medical care and structural
biology.
