debian-med 3.7.1 source package in Ubuntu
Changelog
debian-med (3.7.1) unstable; urgency=medium
* Remove libbiod-dev
* Remove r-cran-rsgcc (see #1002794)
* Remove r-other-hms-dbmi-spp since it is r-cran-spp
* Standards-Version: 4.6.0
* start of automatic changelog entry *
* Changes in metapackage dependencies
-med-bio
added:
Recommends: r-bioc-mofa2, igblast, tipp, haploview, cutesv,
python3-cogent3
Suggests: r-bioc-isoformswitchanalyzer, catfishq, nano-snakemake,
tandem-genotypes, illustrate
removed:
Recommends: hinge, r-bioc-pcamethods, python3-cogent,
r-other-hms-dbmi-spp, haploview-cran-amap, compclust,
gassst, ccs, ncbi-igblast
Suggests: r-cran-rsgcc, r-bioc-org.ce.eg.db, r-bioc-org.rn.eg.db
-med-bio-dev
added:
Recommends: goby-java, python3-cigar, python3-pangolearn,
python3-compclust
removed:
Recommends: libgoby-java, r-other-hms-dbmi-spp, pangolearn, libbiod-dev,
python3-hyphy
Suggests: r-cran-rsgcc
-med-bio-ngs
added:
Recommends: q2cli
Suggests: r-bioc-mofa2, r-bioc-isoformswitchanalyzer
-med-covid-19
added:
Recommends: tipp, python3-idseq-dag, r-cran-kernelheaping
removed:
Recommends: idseq-dag
-med-epi
added:
Recommends: r-cran-kernelheaping
-med-imaging
added:
Suggests: illustrate
-med-imaging-dev
added:
Recommends: libvtk9-dev, libinsighttoolkit5-dev
Suggests: libvtk7-dev
removed:
Recommends: libvtk7-dev, libinsighttoolkit4-dev
Suggests: libvtk6-dev
-- Andreas Tille <email address hidden> Wed, 12 Jan 2022 20:44:28 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Jammy | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| debian-med_3.7.1.dsc | 2.9 KiB | efef33cc29d081c3373d110cc51c6515a3e417d39aabde81789240b41d0830fb |
| debian-med_3.7.1.tar.xz | 121.5 KiB | 14fc19b3808673b844c0742ab19f6e1b398875ad14fd01dd1dedab9d907726f4 |
Available diffs
- diff from 3.7 to 3.7.1 (16.1 KiB)
No changes file available.
Binary packages built by this source
- med-all: No summary available for med-all in ubuntu kinetic.
No description available for med-all in ubuntu kinetic.
- med-bio: Debian Med bioinformatics packages
This metapackage will install Debian packages for use in molecular biology,
structural biology and other biological sciences.
- med-bio-dev: No summary available for med-bio-dev in ubuntu kinetic.
No description available for med-bio-dev in ubuntu kinetic.
- med-cloud: No summary available for med-cloud in ubuntu kinetic.
No description available for med-cloud in ubuntu kinetic.
- med-config: Debian Med general config package
This package provides the basic infrastructure of all metapackages assembled
by the Debian Med team.
.
This metapackage provides common features shared between the different
metapackages of the project. Moreover it introduces a method to handle a
'med' system users group using debconf.
.
The Debian Med Project include metapackages for different tasks, which are:
* applications for microbiological research and support for development of
biological applications
* cloud computing in microbiological research
* drug databases
* dental surgery practice
* epidemiology and medical statistics
* image processing and support for imaging application development
* pharmacological research
* radiation oncology, diagnostic imaging and related fields
* medical practice
* psychological research and practice
* rehabilitation
* typesetting and publishing
* miscellaneous tools
.
Each task is represented by a metapackage. Metapackages do not contain
executable programs, but rather dependencies from other packages. This way
you will conveniently get all free medical software which is available for
Debian by simply installing the relevant metapackage
- med-data: Debian Med drug databases
This metapackage will install free drug databases and related
applications. The database can be accessed by any EMR using
the application.
- med-dental: No summary available for med-dental in ubuntu kinetic.
No description available for med-dental in ubuntu kinetic.
- med-epi: Debian Med epidemiology related packages
This metapackage will install tools that are useful in epidemiological
research. Several packages making use of the GNU R data language for
statistical investigation. It might be a good idea to read the paper
"A short introduction to R for Epidemiology" at
http://staff.pubhealth .ku.dk/ %7Ebxc/ Epi/R-intro. pdf
- med-his: No summary available for med-his in ubuntu kinetic.
No description available for med-his in ubuntu kinetic.
- med-imaging: No summary available for med-imaging in ubuntu kinetic.
No description available for med-imaging in ubuntu kinetic.
- med-imaging-dev: Debian Med image processing and visualization packages development
This metapackage will install Debian packages which might be useful
for developing applications for medical image processing and
visualization.
- med-laboratory: Debian Med suggestions for medical laboratories
This metapackage contains dependencies for software and that could
be useful ro run a medical laboratory.
- med-oncology: Debian Med packages for oncology
This metapackage will install tools that are useful for radiation
oncology.
- med-pharmacy: Debian Med packages for pharmaceutical research
This metapackage contains dependencies for a
collection of software and documentation which is useful for
pharmaceutical research.
- med-physics: Debian Med packages for medical physicists
This metapackage contains dependencies for a
collection of software and documentation which is useful for
medical physicists in radiation oncology, diagnostics imaging
and related fields.
- med-practice: Debian Med packages for practice management
This metapackage contains dependencies for a collection of software
which might be helpful for practitioners to manage their practice.
- med-psychology: Debian Med packages for psychology
This metapackage contains dependencies for a collection of software
which might be helpful for psychological research.
- med-research: Debian Med packages for medical research
This metapackage will install tools that are useful for
medical research.
- med-statistics: No summary available for med-statistics in ubuntu kinetic.
No description available for med-statistics in ubuntu kinetic.
- med-tasks: Debian Med tasks for tasksel
This package provides Debian Med tasks in tasksel.
.
These tasks are described in detail at
https://blends. debian. org/med/ tasks/
- med-tools: No summary available for med-tools in ubuntu kinetic.
No description available for med-tools in ubuntu kinetic.
- med-typesetting: No summary available for med-typesetting in ubuntu kinetic.
No description available for med-typesetting in ubuntu kinetic.
